cmd.read_pdbstr("""\ ATOM 1 N LEU A 7 11.366 -11.626 3.004 1.00 0.58 \ ATOM 2 CA LEU A 7 11.738 -12.056 4.380 1.00 0.58 \ ATOM 3 C LEU A 7 12.911 -11.244 4.912 1.00 0.58 \ ATOM 4 O LEU A 7 13.344 -10.283 4.274 1.00 0.58 \ ATOM 5 N PRO A 8 13.437 -11.631 6.086 1.00 0.41 \ ATOM 6 CA PRO A 8 14.569 -10.928 6.702 1.00 0.41 \ ATOM 7 C PRO A 8 15.839 -10.942 5.838 1.00 0.41 \ ATOM 8 O PRO A 8 15.903 -11.680 4.854 1.00 0.41 \ ATOM 9 CB PRO A 8 14.801 -11.699 8.004 1.00 0.41 \ ATOM 10 CG PRO A 8 13.532 -12.428 8.265 1.00 0.41 \ ATOM 11 CD PRO A 8 12.943 -12.730 6.933 1.00 0.41 \ ATOM 12 N PRO A 9 16.848 -10.132 6.207 1.00 -0.79 \ ATOM 13 CA PRO A 9 18.040 -9.972 5.371 1.00 -0.79 \ ATOM 14 C PRO A 9 18.717 -11.281 4.955 1.00 -0.79 \ ATOM 15 O PRO A 9 19.225 -12.027 5.813 1.00 -0.79 \ ATOM 16 CB PRO A 9 18.971 -9.127 6.251 1.00 -0.79 \ ATOM 17 CG PRO A 9 18.045 -8.314 7.082 1.00 -0.79 \ ATOM 18 CD PRO A 9 16.872 -9.221 7.366 1.00 -0.79 \ ATOM 19 N GLY A 10 18.699 -11.540 3.644 1.00 -0.48 \ ATOM 20 CA GLY A 10 19.469 -12.621 3.036 1.00 -0.48 \ ATOM 21 C GLY A 10 18.708 -13.890 2.689 1.00 -0.48 \ ATOM 22 O GLY A 10 19.323 -14.865 2.283 1.00 -0.48 \ ATOM 23 N TRP A 11 17.381 -13.876 2.812 1.00 2.12 \ ATOM 24 CA TRP A 11 16.573 -15.099 2.649 1.00 2.12 \ ATOM 25 C TRP A 11 15.971 -15.253 1.258 1.00 2.12 \ ATOM 26 O TRP A 11 15.508 -14.282 0.659 1.00 2.12 \ ATOM 27 CB TRP A 11 15.444 -15.146 3.682 1.00 2.12 \ ATOM 28 CG TRP A 11 15.897 -15.420 5.070 1.00 2.12 \ ATOM 29 CD1 TRP A 11 16.074 -14.508 6.068 1.00 2.12 \ ATOM 30 CD2 TRP A 11 16.223 -16.695 5.636 1.00 2.12 \ ATOM 31 NE1 TRP A 11 16.500 -15.124 7.208 1.00 2.12 \ ATOM 32 CE2 TRP A 11 16.589 -16.472 6.979 1.00 2.12 \ ATOM 33 CE3 TRP A 11 16.234 -18.005 5.143 1.00 2.12 \ ATOM 34 CZ2 TRP A 11 16.974 -17.506 7.831 1.00 2.12 \ ATOM 35 CZ3 TRP A 11 16.616 -19.033 5.995 1.00 2.12 \ ATOM 36 CH2 TRP A 11 16.977 -18.779 7.323 1.00 2.12 \ ATOM 37 N GLU A 12 15.965 -16.490 0.761 1.00 -0.42 \ ATOM 38 CA GLU A 12 15.333 -16.826 -0.511 1.00 -0.42 \ ATOM 39 C GLU A 12 14.520 -18.107 -0.346 1.00 -0.42 \ ATOM 40 O GLU A 12 14.846 -18.954 0.489 1.00 -0.42 \ ATOM 41 CB GLU A 12 16.376 -17.004 -1.628 1.00 -0.42 \ ATOM 42 CG GLU A 12 17.134 -18.341 -1.604 1.00 -0.42 \ ATOM 43 CD GLU A 12 18.211 -18.452 -2.678 1.00 -0.42 \ ATOM 44 OE1 GLU A 12 19.257 -17.776 -2.560 1.00 -0.42 \ ATOM 45 OE2 GLU A 12 18.018 -19.242 -3.632 1.00 -0.42 \ ATOM 46 N LYS A 13 13.466 -18.227 -1.147 1.00 -0.52 \ ATOM 47 CA LYS A 13 12.641 -19.424 -1.192 1.00 -0.52 \ ATOM 48 C LYS A 13 13.300 -20.401 -2.153 1.00 -0.52 \ ATOM 49 O LYS A 13 13.768 -20.011 -3.227 1.00 -0.52 \ ATOM 50 CB LYS A 13 11.219 -19.076 -1.656 1.00 -0.52 \ ATOM 51 CG LYS A 13 10.203 -20.202 -1.510 1.00 -0.52 \ ATOM 52 CD LYS A 13 8.800 -19.746 -1.912 1.00 -0.52 \ ATOM 53 N ALA A 14 13.347 -21.669 -1.758 1.00 -0.61 \ ATOM 54 CA ALA A 14 13.942 -22.718 -2.575 1.00 -0.61 \ ATOM 55 C ALA A 14 13.089 -23.977 -2.520 1.00 -0.61 \ ATOM 56 O ALA A 14 12.159 -24.079 -1.727 1.00 -0.61 \ ATOM 57 CB ALA A 14 15.358 -23.016 -2.106 1.00 -0.61 \ ATOM 58 N MET A 15 13.413 -24.932 -3.379 1.00 -0.78 \ ATOM 59 CA MET A 15 12.672 -26.181 -3.453 1.00 -0.78 \ ATOM 60 C MET A 15 13.614 -27.324 -3.127 1.00 -0.78 \ ATOM 61 O MET A 15 14.697 -27.419 -3.704 1.00 -0.78 \ ATOM 62 CB MET A 15 12.091 -26.346 -4.857 1.00 -0.78 \ ATOM 63 CG MET A 15 10.809 -27.145 -4.914 1.00 -0.78 \ ATOM 64 SD MET A 15 9.611 -26.326 -5.986 1.00 -0.78 \ ATOM 65 CE MET A 15 9.135 -24.950 -4.936 1.00 -0.78 \ ATOM 66 N SER A 16 13.212 -28.178 -2.187 1.00 -0.03 \ ATOM 67 CA SER A 16 14.041 -29.305 -1.773 1.00 -0.03 \ ATOM 68 C SER A 16 14.344 -30.215 -2.960 1.00 -0.03 \ ATOM 69 O SER A 16 13.431 -30.661 -3.656 1.00 -0.03 \ ATOM 70 CB SER A 16 13.346 -30.118 -0.685 1.00 -0.03 \ ATOM 71 OG SER A 16 14.116 -31.265 -0.365 1.00 -0.03 \ ATOM 72 N ARG A 17 15.629 -30.484 -3.175 1.00 -0.74 \ ATOM 73 CA ARG A 17 16.078 -31.295 -4.304 1.00 -0.74 \ ATOM 74 C ARG A 17 15.598 -32.738 -4.171 1.00 -0.74 \ ATOM 75 O ARG A 17 15.315 -33.397 -5.173 1.00 -0.74 \ ATOM 76 CB ARG A 17 17.608 -31.242 -4.410 1.00 -0.74 \ ATOM 77 CG ARG A 17 18.202 -31.850 -5.675 1.00 -0.74 \ ATOM 78 CD ARG A 17 17.677 -31.188 -6.937 1.00 -0.74 \ ATOM 79 NE ARG A 17 17.873 -29.739 -6.939 1.00 -0.74 \ ATOM 80 CZ ARG A 17 18.976 -29.115 -7.357 1.00 -0.74 \ ATOM 81 NH1 ARG A 17 20.021 -29.798 -7.816 1.00 -0.74 \ ATOM 82 NH2 ARG A 17 19.033 -27.788 -7.307 1.00 -0.74 \ ATOM 83 N SER A 18 15.491 -33.219 -2.934 1.00 -0.74 \ ATOM 84 CA SER A 18 15.076 -34.596 -2.685 1.00 -0.74 \ ATOM 85 C SER A 18 13.556 -34.740 -2.553 1.00 -0.74 \ ATOM 86 O SER A 18 12.977 -35.619 -3.189 1.00 -0.74 \ ATOM 87 CB SER A 18 15.805 -35.176 -1.466 1.00 -0.74 \ ATOM 88 OG SER A 18 15.724 -34.317 -0.343 1.00 -0.74 \ ATOM 89 N SER A 19 12.911 -33.864 -1.777 1.00 -1.00 \ ATOM 90 CA SER A 19 11.466 -33.985 -1.485 1.00 -1.00 \ ATOM 91 C SER A 19 10.535 -33.071 -2.305 1.00 -1.00 \ ATOM 92 O SER A 19 9.336 -33.332 -2.401 1.00 -1.00 \ ATOM 93 CB SER A 19 11.205 -33.760 0.013 1.00 -1.00 \ ATOM 94 OG SER A 19 11.198 -32.379 0.356 1.00 -1.00 \ ATOM 95 N GLY A 20 11.073 -31.991 -2.869 1.00 -0.06 \ ATOM 96 CA GLY A 20 10.262 -31.014 -3.607 1.00 -0.06 \ ATOM 97 C GLY A 20 9.516 -29.987 -2.762 1.00 -0.06 \ ATOM 98 O GLY A 20 8.840 -29.106 -3.295 1.00 -0.06 \ ATOM 99 N ARG A 21 9.635 -30.096 -1.443 1.00 -0.71 \ ATOM 100 CA ARG A 21 8.949 -29.198 -0.525 1.00 -0.71 \ ATOM 101 C ARG A 21 9.692 -27.861 -0.451 1.00 -0.71 \ ATOM 102 O ARG A 21 10.914 -27.818 -0.569 1.00 -0.71 \ ATOM 103 CB ARG A 21 8.873 -29.861 0.853 1.00 -0.71 \ ATOM 104 CG ARG A 21 7.889 -29.251 1.840 1.00 -0.71 \ ATOM 105 CD ARG A 21 7.347 -30.317 2.814 1.00 -0.71 \ ATOM 106 NE ARG A 21 8.311 -31.396 3.031 1.00 -0.71 \ ATOM 107 CZ ARG A 21 9.232 -31.436 3.994 1.00 -0.71 \ ATOM 108 NH1 ARG A 21 9.324 -30.467 4.901 1.00 -0.71 \ ATOM 109 NH2 ARG A 21 10.069 -32.472 4.055 1.00 -0.71 \ ATOM 110 N VAL A 22 8.945 -26.780 -0.260 1.00 -0.70 \ ATOM 111 CA VAL A 22 9.521 -25.443 -0.162 1.00 -0.70 \ ATOM 112 C VAL A 22 10.357 -25.324 1.115 1.00 -0.70 \ ATOM 113 O VAL A 22 9.970 -25.818 2.162 1.00 -0.70 \ ATOM 114 CB VAL A 22 8.416 -24.358 -0.171 1.00 -0.70 \ ATOM 115 CG1 VAL A 22 8.981 -22.989 0.188 1.00 -0.70 \ ATOM 116 CG2 VAL A 22 7.740 -24.310 -1.535 1.00 -0.70 \ ATOM 117 N TYR A 23 11.523 -24.696 1.005 1.00 1.43 \ ATOM 118 CA TYR A 23 12.301 -24.330 2.181 1.00 1.43 \ ATOM 119 C TYR A 23 12.936 -22.971 1.973 1.00 1.43 \ ATOM 120 O TYR A 23 12.780 -22.359 0.920 1.00 1.43 \ ATOM 121 CB TYR A 23 13.351 -25.396 2.509 1.00 1.43 \ ATOM 122 CG TYR A 23 14.547 -25.424 1.592 1.00 1.43 \ ATOM 123 CD1 TYR A 23 14.501 -26.092 0.378 1.00 1.43 \ ATOM 124 CD2 TYR A 23 15.738 -24.800 1.952 1.00 1.43 \ ATOM 125 CE1 TYR A 23 15.609 -26.124 -0.465 1.00 1.43 \ ATOM 126 CE2 TYR A 23 16.848 -24.835 1.123 1.00 1.43 \ ATOM 127 CZ TYR A 23 16.774 -25.490 -0.086 1.00 1.43 \ ATOM 128 OH TYR A 23 17.870 -25.524 -0.908 1.00 1.43 \ ATOM 129 N TYR A 24 13.641 -22.503 2.993 1.00 1.92 \ ATOM 130 CA TYR A 24 14.224 -21.176 2.963 1.00 1.92 \ ATOM 131 C TYR A 24 15.707 -21.259 3.249 1.00 1.92 \ ATOM 132 O TYR A 24 16.135 -22.008 4.111 1.00 1.92 \ ATOM 133 CB TYR A 24 13.491 -20.269 3.948 1.00 1.92 \ ATOM 134 CG TYR A 24 12.019 -20.161 3.599 1.00 1.92 \ ATOM 135 CD1 TYR A 24 11.098 -21.081 4.099 1.00 1.92 \ ATOM 136 CD2 TYR A 24 11.561 -19.187 2.722 1.00 1.92 \ ATOM 137 CE1 TYR A 24 9.746 -21.008 3.762 1.00 1.92 \ ATOM 138 CE2 TYR A 24 10.214 -19.106 2.375 1.00 1.92 \ ATOM 139 CZ TYR A 24 9.313 -20.018 2.900 1.00 1.92 \ ATOM 140 OH TYR A 24 7.979 -19.939 2.560 1.00 1.92 \ ATOM 141 N PHE A 25 16.471 -20.475 2.489 1.00 -0.07 \ ATOM 142 CA PHE A 25 17.925 -20.476 2.537 1.00 -0.07 \ ATOM 143 C PHE A 25 18.417 -19.043 2.689 1.00 -0.07 \ ATOM 144 O PHE A 25 17.923 -18.133 2.021 1.00 -0.07 \ ATOM 145 CB PHE A 25 18.498 -21.096 1.253 1.00 -0.07 \ ATOM 146 CG PHE A 25 19.986 -20.939 1.113 1.00 -0.07 \ ATOM 147 CD1 PHE A 25 20.852 -21.591 1.981 1.00 -0.07 \ ATOM 148 CD2 PHE A 25 20.520 -20.118 0.131 1.00 -0.07 \ ATOM 149 CE1 PHE A 25 22.236 -21.441 1.863 1.00 -0.07 \ ATOM 150 CE2 PHE A 25 21.902 -19.968 0.004 1.00 -0.07 \ ATOM 151 CZ PHE A 25 22.757 -20.630 0.879 1.00 -0.07 \ ATOM 152 N ASN A 26 19.386 -18.859 3.574 1.00 1.17 \ ATOM 153 CA ASN A 26 19.998 -17.555 3.784 1.00 1.17 \ ATOM 154 C ASN A 26 21.421 -17.559 3.242 1.00 1.17 \ ATOM 155 O ASN A 26 22.269 -18.300 3.720 1.00 1.17 \ ATOM 156 CB ASN A 26 19.985 -17.216 5.271 1.00 1.17 \ ATOM 157 CG ASN A 26 20.425 -15.792 5.544 1.00 1.17 \ ATOM 158 OD1 ASN A 26 21.533 -15.396 5.183 1.00 1.17 \ ATOM 159 ND2 ASN A 26 19.558 -15.014 6.179 1.00 1.17 \ ATOM 160 N HIS A 27 21.683 -16.726 2.237 1.00 -0.56 \ ATOM 161 CA HIS A 27 22.984 -16.741 1.555 1.00 -0.56 \ ATOM 162 C HIS A 27 24.090 -15.991 2.308 1.00 -0.56 \ ATOM 163 O HIS A 27 25.242 -16.024 1.893 1.00 -0.56 \ ATOM 164 CB HIS A 27 22.874 -16.217 0.111 1.00 -0.56 \ ATOM 165 CG HIS A 27 22.509 -14.769 0.014 1.00 -0.56 \ ATOM 166 ND1 HIS A 27 23.450 -13.763 0.051 1.00 -0.56 \ ATOM 167 CD2 HIS A 27 21.311 -14.158 -0.135 1.00 -0.56 \ ATOM 168 CE1 HIS A 27 22.844 -12.595 -0.057 1.00 -0.56 \ ATOM 169 NE2 HIS A 27 21.547 -12.806 -0.172 1.00 -0.56 \ ATOM 170 N ILE A 28 23.731 -15.343 3.413 1.00 -0.85 \ ATOM 171 CA ILE A 28 24.696 -14.658 4.269 1.00 -0.85 \ ATOM 172 C ILE A 28 25.179 -15.572 5.397 1.00 -0.85 \ ATOM 173 O ILE A 28 26.363 -15.589 5.710 1.00 -0.85 \ ATOM 174 CB ILE A 28 24.098 -13.373 4.871 1.00 -0.85 \ ATOM 175 CG1 ILE A 28 23.555 -12.462 3.767 1.00 -0.85 \ ATOM 176 CG2 ILE A 28 25.149 -12.625 5.705 1.00 -0.85 \ ATOM 177 CD1 ILE A 28 22.810 -11.255 4.287 1.00 -0.85 \ """, "e3tc5A2_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e3tc5A2_csv", state=0, origin=1) cmd.zoom("e3tc5A2_csv", animate=-1)