cmd.read_pdbstr("""\ ATOM 1 N ILE F 5 -38.127 82.504 -3.381 1.00 0.90 \ ATOM 2 CA ILE F 5 -39.264 83.322 -2.949 1.00 0.90 \ ATOM 3 C ILE F 5 -39.840 82.927 -1.588 1.00 0.90 \ ATOM 4 O ILE F 5 -40.003 81.743 -1.293 1.00 0.90 \ ATOM 5 CB ILE F 5 -40.415 83.311 -3.992 1.00 0.90 \ ATOM 6 CG1 ILE F 5 -41.751 83.676 -3.331 1.00 0.90 \ ATOM 7 CG2 ILE F 5 -40.539 81.940 -4.647 1.00 0.90 \ ATOM 8 CD1 ILE F 5 -41.806 85.065 -2.683 1.00 0.90 \ ATOM 9 N PRO F 6 -40.140 83.931 -0.752 1.00 0.24 \ ATOM 10 CA PRO F 6 -40.937 83.799 0.472 1.00 0.24 \ ATOM 11 C PRO F 6 -42.344 83.180 0.302 1.00 0.24 \ ATOM 12 O PRO F 6 -42.937 83.234 -0.790 1.00 0.24 \ ATOM 13 CB PRO F 6 -41.007 85.242 0.982 1.00 0.24 \ ATOM 14 CG PRO F 6 -39.692 85.795 0.598 1.00 0.24 \ ATOM 15 CD PRO F 6 -39.387 85.197 -0.763 1.00 0.24 \ ATOM 16 N PRO F 7 -42.815 82.529 1.389 1.00 -0.43 \ ATOM 17 CA PRO F 7 -43.972 81.760 1.864 1.00 -0.43 \ ATOM 18 C PRO F 7 -45.039 82.536 2.655 1.00 -0.43 \ ATOM 19 O PRO F 7 -44.883 82.561 3.878 1.00 -0.43 \ ATOM 20 CB PRO F 7 -43.317 80.781 2.821 1.00 -0.43 \ ATOM 21 CG PRO F 7 -42.198 81.609 3.445 1.00 -0.43 \ ATOM 22 CD PRO F 7 -41.938 82.798 2.539 1.00 -0.43 \ ATOM 23 N GLY F 8 -46.045 83.144 2.021 1.00 -0.96 \ ATOM 24 CA GLY F 8 -47.103 83.903 2.690 1.00 -0.96 \ ATOM 25 C GLY F 8 -46.995 85.400 2.476 1.00 -0.96 \ ATOM 26 O GLY F 8 -47.722 86.173 3.084 1.00 -0.96 \ ATOM 27 N LEU F 9 -46.048 85.788 1.630 1.00 0.27 \ ATOM 28 CA LEU F 9 -45.786 87.177 1.286 1.00 0.27 \ ATOM 29 C LEU F 9 -46.827 87.758 0.337 1.00 0.27 \ ATOM 30 O LEU F 9 -47.315 88.883 0.537 1.00 0.27 \ ATOM 31 CB LEU F 9 -44.435 87.272 0.592 1.00 0.27 \ ATOM 32 CG LEU F 9 -43.998 88.710 0.379 1.00 0.27 \ ATOM 33 CD1 LEU F 9 -43.869 89.305 1.781 1.00 0.27 \ ATOM 34 CD2 LEU F 9 -42.707 88.828 -0.440 1.00 0.27 \ ATOM 35 N THR F 10 -47.140 86.991 -0.707 1.00 0.39 \ ATOM 36 CA THR F 10 -48.090 87.408 -1.736 1.00 0.39 \ ATOM 37 C THR F 10 -49.446 87.773 -1.141 1.00 0.39 \ ATOM 38 O THR F 10 -50.102 88.719 -1.583 1.00 0.39 \ ATOM 39 CB THR F 10 -48.295 86.304 -2.774 1.00 0.39 \ ATOM 40 OG1 THR F 10 -47.020 85.887 -3.257 1.00 0.39 \ ATOM 41 CG2 THR F 10 -49.127 86.809 -3.940 1.00 0.39 \ ATOM 42 N GLU F 11 -49.864 87.009 -0.141 1.00 -1.41 \ ATOM 43 CA GLU F 11 -51.109 87.278 0.559 1.00 -1.41 \ ATOM 44 C GLU F 11 -51.039 88.633 1.283 1.00 -1.41 \ ATOM 45 O GLU F 11 -51.999 89.407 1.264 1.00 -1.41 \ ATOM 46 CB GLU F 11 -51.433 86.135 1.529 1.00 -1.41 \ ATOM 47 CG GLU F 11 -51.820 84.827 0.842 1.00 -1.41 \ ATOM 48 CD GLU F 11 -50.655 84.137 0.130 1.00 -1.41 \ ATOM 49 OE1 GLU F 11 -50.890 83.138 -0.577 1.00 -1.41 \ ATOM 50 OE2 GLU F 11 -49.497 84.576 0.282 1.00 -1.41 \ ATOM 51 N LEU F 12 -49.896 88.928 1.902 1.00 -0.15 \ ATOM 52 CA LEU F 12 -49.705 90.192 2.616 1.00 -0.15 \ ATOM 53 C LEU F 12 -49.776 91.393 1.689 1.00 -0.15 \ ATOM 54 O LEU F 12 -50.613 92.295 1.864 1.00 -0.15 \ ATOM 55 CB LEU F 12 -48.359 90.195 3.330 1.00 -0.15 \ ATOM 56 CG LEU F 12 -48.404 90.811 4.728 1.00 -0.15 \ ATOM 57 CD1 LEU F 12 -47.035 90.809 5.364 1.00 -0.15 \ ATOM 58 CD2 LEU F 12 -48.940 92.213 4.652 1.00 -0.15 \ ATOM 59 N LEU F 13 -48.900 91.391 0.694 1.00 0.39 \ ATOM 60 CA LEU F 13 -48.888 92.466 -0.288 1.00 0.39 \ ATOM 61 C LEU F 13 -50.245 92.607 -0.949 1.00 0.39 \ ATOM 62 O LEU F 13 -50.711 93.700 -1.213 1.00 0.39 \ ATOM 63 CB LEU F 13 -47.831 92.225 -1.358 1.00 0.39 \ ATOM 64 CG LEU F 13 -46.406 92.451 -0.880 1.00 0.39 \ ATOM 65 CD1 LEU F 13 -46.288 92.126 0.636 1.00 0.39 \ ATOM 66 CD2 LEU F 13 -45.434 91.653 -1.745 1.00 0.39 \ ATOM 67 N GLN F 14 -50.879 91.487 -1.228 1.00 0.39 \ ATOM 68 CA GLN F 14 -52.203 91.513 -1.809 1.00 0.39 \ ATOM 69 C GLN F 14 -53.188 92.273 -0.902 1.00 0.39 \ ATOM 70 O GLN F 14 -53.828 93.222 -1.343 1.00 0.39 \ ATOM 71 CB GLN F 14 -52.652 90.080 -2.061 1.00 0.39 \ ATOM 72 CG GLN F 14 -54.000 89.921 -2.689 1.00 0.39 \ ATOM 73 CD GLN F 14 -54.235 88.489 -3.074 1.00 0.39 \ ATOM 74 OE1 GLN F 14 -53.291 87.774 -3.428 1.00 0.39 \ ATOM 75 NE2 GLN F 14 -55.485 88.047 -2.989 1.00 0.39 \ ATOM 76 N GLY F 15 -53.292 91.874 0.365 1.00 0.22 \ ATOM 77 CA GLY F 15 -54.200 92.540 1.281 1.00 0.22 \ ATOM 78 C GLY F 15 -53.958 94.030 1.250 1.00 0.22 \ ATOM 79 O GLY F 15 -54.873 94.835 1.022 1.00 0.22 \ ATOM 80 N TYR F 16 -52.703 94.402 1.445 1.00 -0.54 \ ATOM 81 CA TYR F 16 -52.373 95.812 1.456 1.00 -0.54 \ ATOM 82 C TYR F 16 -52.790 96.498 0.167 1.00 -0.54 \ ATOM 83 O TYR F 16 -53.415 97.546 0.188 1.00 -0.54 \ ATOM 84 CB TYR F 16 -50.882 96.026 1.691 1.00 -0.54 \ ATOM 85 CG TYR F 16 -50.440 97.457 1.461 1.00 -0.54 \ ATOM 86 CD1 TYR F 16 -50.303 98.329 2.517 1.00 -0.54 \ ATOM 87 CD2 TYR F 16 -50.170 97.938 0.172 1.00 -0.54 \ ATOM 88 CE1 TYR F 16 -49.906 99.629 2.308 1.00 -0.54 \ ATOM 89 CE2 TYR F 16 -49.772 99.243 -0.043 1.00 -0.54 \ ATOM 90 CZ TYR F 16 -49.641 100.078 1.029 1.00 -0.54 \ ATOM 91 OH TYR F 16 -49.242 101.374 0.833 1.00 -0.54 \ ATOM 92 N THR F 17 -52.437 95.908 -0.956 1.00 0.89 \ ATOM 93 CA THR F 17 -52.612 96.555 -2.239 1.00 0.89 \ ATOM 94 C THR F 17 -54.083 96.762 -2.524 1.00 0.89 \ ATOM 95 O THR F 17 -54.509 97.845 -2.932 1.00 0.89 \ ATOM 96 CB THR F 17 -51.998 95.720 -3.367 1.00 0.89 \ ATOM 97 OG1 THR F 17 -50.597 95.564 -3.135 1.00 0.89 \ ATOM 98 CG2 THR F 17 -52.206 96.401 -4.723 1.00 0.89 \ ATOM 99 N VAL F 18 -54.865 95.718 -2.305 1.00 1.12 \ ATOM 100 CA VAL F 18 -56.294 95.803 -2.526 1.00 1.12 \ ATOM 101 C VAL F 18 -56.863 96.874 -1.605 1.00 1.12 \ ATOM 102 O VAL F 18 -57.837 97.538 -1.945 1.00 1.12 \ ATOM 103 CB VAL F 18 -56.986 94.467 -2.275 1.00 1.12 \ ATOM 104 CG1 VAL F 18 -57.304 94.308 -0.792 1.00 1.12 \ ATOM 105 CG2 VAL F 18 -58.242 94.373 -3.110 1.00 1.12 \ ATOM 106 N GLU F 19 -56.246 97.063 -0.444 1.00 -0.78 \ ATOM 107 CA GLU F 19 -56.652 98.182 0.396 1.00 -0.78 \ ATOM 108 C GLU F 19 -56.252 99.546 -0.162 1.00 -0.78 \ ATOM 109 O GLU F 19 -56.918 100.539 0.102 1.00 -0.78 \ ATOM 110 CB GLU F 19 -56.165 97.999 1.828 1.00 -0.78 \ ATOM 111 CG GLU F 19 -56.948 96.927 2.526 1.00 -0.78 \ ATOM 112 CD GLU F 19 -58.435 97.088 2.289 1.00 -0.78 \ ATOM 113 OE1 GLU F 19 -58.932 98.229 2.412 1.00 -0.78 \ ATOM 114 OE2 GLU F 19 -59.101 96.083 1.964 1.00 -0.78 \ ATOM 115 N VAL F 20 -55.172 99.600 -0.933 1.00 0.89 \ ATOM 116 CA VAL F 20 -54.791 100.846 -1.598 1.00 0.89 \ ATOM 117 C VAL F 20 -55.737 101.198 -2.727 1.00 0.89 \ ATOM 118 O VAL F 20 -55.998 102.367 -2.981 1.00 0.89 \ ATOM 119 CB VAL F 20 -53.393 100.790 -2.212 1.00 0.89 \ ATOM 120 CG1 VAL F 20 -53.227 101.936 -3.245 1.00 0.89 \ ATOM 121 CG2 VAL F 20 -52.327 100.831 -1.119 1.00 0.89 \ ATOM 122 N LEU F 21 -56.237 100.185 -3.424 1.00 0.89 \ ATOM 123 CA LEU F 21 -57.128 100.432 -4.557 1.00 0.89 \ ATOM 124 C LEU F 21 -58.512 100.907 -4.122 1.00 0.89 \ ATOM 125 O LEU F 21 -59.186 101.640 -4.850 1.00 0.89 \ ATOM 126 CB LEU F 21 -57.229 99.195 -5.445 1.00 0.89 \ ATOM 127 CG LEU F 21 -55.860 98.846 -6.018 1.00 0.89 \ ATOM 128 CD1 LEU F 21 -55.928 97.815 -7.114 1.00 0.89 \ ATOM 129 CD2 LEU F 21 -55.226 100.112 -6.553 1.00 0.89 \ ATOM 130 N ARG F 22 -58.920 100.490 -2.927 1.00 -0.56 \ ATOM 131 CA ARG F 22 -60.197 100.904 -2.351 1.00 -0.56 \ ATOM 132 C ARG F 22 -60.135 102.266 -1.648 1.00 -0.56 \ ATOM 133 O ARG F 22 -61.144 102.751 -1.150 1.00 -0.56 \ ATOM 134 CB ARG F 22 -60.692 99.854 -1.354 1.00 -0.56 \ ATOM 135 CG ARG F 22 -61.189 98.568 -1.985 1.00 -0.56 \ ATOM 136 CD ARG F 22 -61.900 97.704 -0.952 1.00 -0.56 \ ATOM 137 NE ARG F 22 -62.462 96.485 -1.532 1.00 -0.56 \ ATOM 138 CZ ARG F 22 -62.955 95.474 -0.821 1.00 -0.56 \ ATOM 139 NH1 ARG F 22 -62.953 95.528 0.504 1.00 -0.56 \ ATOM 140 NH2 ARG F 22 -63.446 94.405 -1.435 1.00 -0.56 \ ATOM 141 N GLN F 23 -58.954 102.867 -1.582 1.00 -1.77 \ ATOM 142 CA GLN F 23 -58.781 104.128 -0.871 1.00 -1.77 \ ATOM 143 C GLN F 23 -58.033 105.166 -1.690 1.00 -1.77 \ ATOM 144 O GLN F 23 -58.548 106.239 -1.981 1.00 -1.77 \ ATOM 145 CB GLN F 23 -58.096 103.887 0.462 1.00 -1.77 \ ATOM 146 CG GLN F 23 -58.811 102.851 1.296 1.00 -1.77 \ ATOM 147 CD GLN F 23 -58.265 102.770 2.695 1.00 -1.77 \ ATOM 148 OE1 GLN F 23 -57.830 103.774 3.259 1.00 -1.77 \ ATOM 149 NE2 GLN F 23 -58.277 101.571 3.268 1.00 -1.77 \ ATOM 150 N GLN F 24 -56.799 104.835 -2.039 1.00 -0.15 \ ATOM 151 CA GLN F 24 -55.910 105.739 -2.758 1.00 -0.15 \ ATOM 152 C GLN F 24 -55.628 107.003 -1.967 1.00 -0.15 \ ATOM 153 O GLN F 24 -55.868 108.106 -2.456 1.00 -0.15 \ ATOM 154 CB GLN F 24 -56.486 106.102 -4.129 1.00 -0.15 \ ATOM 155 CG GLN F 24 -56.631 104.928 -5.078 1.00 -0.15 \ ATOM 156 CD GLN F 24 -58.023 104.829 -5.621 1.00 -0.15 \ ATOM 157 OE1 GLN F 24 -58.898 105.575 -5.197 1.00 -0.15 \ ATOM 158 NE2 GLN F 24 -58.246 103.912 -6.562 1.00 -0.15 \ ATOM 159 N PRO F 25 -55.107 106.846 -0.738 1.00 1.81 \ ATOM 160 CA PRO F 25 -54.749 108.044 0.023 1.00 1.81 \ ATOM 161 C PRO F 25 -53.621 108.782 -0.681 1.00 1.81 \ ATOM 162 O PRO F 25 -52.705 108.149 -1.203 1.00 1.81 \ ATOM 163 CB PRO F 25 -54.269 107.481 1.366 1.00 1.81 \ ATOM 164 CG PRO F 25 -53.834 106.087 1.060 1.00 1.81 \ ATOM 165 CD PRO F 25 -54.754 105.605 -0.022 1.00 1.81 \ ATOM 166 N PRO F 26 -53.689 110.119 -0.700 1.00 -0.70 \ ATOM 167 CA PRO F 26 -52.622 110.917 -1.308 1.00 -0.70 \ ATOM 168 C PRO F 26 -51.292 110.605 -0.625 1.00 -0.70 \ ATOM 169 O PRO F 26 -50.231 110.988 -1.110 1.00 -0.70 \ ATOM 170 CB PRO F 26 -53.079 112.361 -1.056 1.00 -0.70 \ ATOM 171 CG PRO F 26 -54.583 112.262 -0.940 1.00 -0.70 \ ATOM 172 CD PRO F 26 -54.819 110.952 -0.242 1.00 -0.70 \ ATOM 173 N ASP F 27 -51.373 109.917 0.509 1.00 -0.75 \ ATOM 174 CA ASP F 27 -50.197 109.510 1.268 1.00 -0.75 \ ATOM 175 C ASP F 27 -50.152 107.998 1.432 1.00 -0.75 \ ATOM 176 O ASP F 27 -51.143 107.374 1.815 1.00 -0.75 \ ATOM 177 CB ASP F 27 -50.179 110.183 2.645 1.00 -0.75 \ ATOM 178 CG ASP F 27 -49.618 109.280 3.732 1.00 -0.75 \ ATOM 179 OD1 ASP F 27 -48.379 109.194 3.864 1.00 -0.75 \ ATOM 180 OD2 ASP F 27 -50.422 108.659 4.457 1.00 -0.75 \ ATOM 181 N LEU F 28 -48.983 107.425 1.164 1.00 0.89 \ ATOM 182 CA LEU F 28 -48.809 105.979 1.102 1.00 0.89 \ ATOM 183 C LEU F 28 -47.986 105.417 2.260 1.00 0.89 \ ATOM 184 O LEU F 28 -48.446 104.538 2.984 1.00 0.89 \ ATOM 185 CB LEU F 28 -48.225 105.567 -0.248 1.00 0.89 \ ATOM 186 CG LEU F 28 -49.169 105.819 -1.422 1.00 0.89 \ ATOM 187 CD1 LEU F 28 -50.526 105.218 -1.108 1.00 0.89 \ ATOM 188 CD2 LEU F 28 -49.300 107.306 -1.724 1.00 0.89 \ ATOM 189 N VAL F 29 -46.752 105.885 2.398 1.00 -1.00 \ ATOM 190 CA VAL F 29 -45.873 105.390 3.448 1.00 -1.00 \ ATOM 191 C VAL F 29 -46.508 105.525 4.820 1.00 -1.00 \ ATOM 192 O VAL F 29 -46.470 104.590 5.615 1.00 -1.00 \ ATOM 193 CB VAL F 29 -44.526 106.116 3.445 1.00 -1.00 \ ATOM 194 CG1 VAL F 29 -43.683 105.653 2.272 1.00 -1.00 \ ATOM 195 CG2 VAL F 29 -44.738 107.627 3.412 1.00 -1.00 \ ATOM 196 N ASP F 30 -47.082 106.689 5.109 1.00 -2.28 \ ATOM 197 CA ASP F 30 -47.822 106.826 6.348 1.00 -2.28 \ ATOM 198 C ASP F 30 -48.852 105.713 6.354 1.00 -2.28 \ ATOM 199 O ASP F 30 -48.978 104.979 7.326 1.00 -2.28 \ ATOM 200 CB ASP F 30 -48.509 108.185 6.454 1.00 -2.28 \ ATOM 201 CG ASP F 30 -47.529 109.327 6.559 1.00 -2.28 \ ATOM 202 OD1 ASP F 30 -47.959 110.489 6.405 1.00 -2.28 \ ATOM 203 OD2 ASP F 30 -46.331 109.066 6.788 1.00 -2.28 \ ATOM 204 N PHE F 31 -49.562 105.568 5.241 1.00 1.81 \ ATOM 205 CA PHE F 31 -50.638 104.590 5.151 1.00 1.81 \ ATOM 206 C PHE F 31 -50.149 103.175 5.348 1.00 1.81 \ ATOM 207 O PHE F 31 -50.812 102.363 5.979 1.00 1.81 \ ATOM 208 CB PHE F 31 -51.372 104.686 3.813 1.00 1.81 \ ATOM 209 CG PHE F 31 -52.482 103.685 3.666 1.00 1.81 \ ATOM 210 CD1 PHE F 31 -53.662 103.837 4.361 1.00 1.81 \ ATOM 211 CD2 PHE F 31 -52.340 102.584 2.847 1.00 1.81 \ ATOM 212 CE1 PHE F 31 -54.680 102.908 4.233 1.00 1.81 \ ATOM 213 CE2 PHE F 31 -53.359 101.653 2.715 1.00 1.81 \ ATOM 214 CZ PHE F 31 -54.524 101.815 3.406 1.00 1.81 \ ATOM 215 N ALA F 32 -48.994 102.873 4.781 1.00 0.33 \ ATOM 216 CA ALA F 32 -48.452 101.531 4.898 1.00 0.33 \ ATOM 217 C ALA F 32 -48.119 101.265 6.354 1.00 0.33 \ ATOM 218 O ALA F 32 -48.548 100.269 6.940 1.00 0.33 \ ATOM 219 CB ALA F 32 -47.215 101.378 4.020 1.00 0.33 \ """, "e3tmhF1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e3tmhF1_csv", state=0, origin=1) cmd.zoom("e3tmhF1_csv", animate=-1)