cmd.read_pdbstr("""\ ATOM 1 N SER B 120 -10.490 39.790 -28.225 1.00 -1.77 \ ATOM 2 CA SER B 120 -9.201 39.104 -27.908 1.00 -1.77 \ ATOM 3 C SER B 120 -7.885 39.610 -28.641 1.00 -1.77 \ ATOM 4 O SER B 120 -7.965 40.131 -29.755 1.00 -1.77 \ ATOM 5 CB SER B 120 -9.350 37.603 -28.120 1.00 -1.77 \ ATOM 6 OG SER B 120 -10.656 37.254 -28.550 1.00 -1.77 \ ATOM 7 N GLU B 121 -6.674 39.387 -28.013 1.00 -1.33 \ ATOM 8 CA GLU B 121 -5.297 39.754 -28.473 1.00 -1.33 \ ATOM 9 C GLU B 121 -5.118 41.226 -28.853 1.00 -1.33 \ ATOM 10 O GLU B 121 -4.119 41.835 -28.459 1.00 -1.33 \ ATOM 11 CB GLU B 121 -4.701 38.771 -29.532 1.00 -1.33 \ ATOM 12 CG GLU B 121 -3.232 38.997 -29.954 1.00 -1.33 \ ATOM 13 CD GLU B 121 -2.522 37.958 -30.832 1.00 -1.33 \ ATOM 14 OE1 GLU B 121 -2.114 38.282 -31.977 1.00 -1.33 \ ATOM 15 OE2 GLU B 121 -2.315 36.826 -30.340 1.00 -1.33 \ ATOM 16 N ASP B 137 -7.730 49.350 -22.092 1.00 -1.33 \ ATOM 17 CA ASP B 137 -8.200 50.631 -21.552 1.00 -1.33 \ ATOM 18 C ASP B 137 -9.425 51.171 -22.319 1.00 -1.33 \ ATOM 19 O ASP B 137 -9.301 51.757 -23.408 1.00 -1.33 \ ATOM 20 CB ASP B 137 -7.059 51.670 -21.451 1.00 -1.33 \ ATOM 21 CG ASP B 137 -7.380 52.871 -20.572 1.00 -1.33 \ ATOM 22 OD1 ASP B 137 -8.252 53.683 -20.965 1.00 -1.33 \ ATOM 23 OD2 ASP B 137 -6.743 53.013 -19.502 1.00 -1.33 \ ATOM 24 N ARG B 138 -10.610 50.957 -21.710 1.00 0.02 \ ATOM 25 CA ARG B 138 -11.927 51.313 -22.244 1.00 0.02 \ ATOM 26 C ARG B 138 -12.914 51.772 -21.168 1.00 0.02 \ ATOM 27 O ARG B 138 -12.954 51.187 -20.086 1.00 0.02 \ ATOM 28 CB ARG B 138 -12.515 50.139 -23.053 1.00 0.02 \ ATOM 29 CG ARG B 138 -12.521 48.784 -22.343 1.00 0.02 \ ATOM 30 CD ARG B 138 -12.858 47.656 -23.300 1.00 0.02 \ ATOM 31 NE ARG B 138 -14.285 47.329 -23.294 1.00 0.02 \ ATOM 32 CZ ARG B 138 -15.015 47.117 -24.386 1.00 0.02 \ ATOM 33 NH1 ARG B 138 -14.463 47.213 -25.594 1.00 0.02 \ ATOM 34 NH2 ARG B 138 -16.305 46.820 -24.281 1.00 0.02 \ ATOM 35 N CYS B 139 -13.728 52.794 -21.492 1.00 1.25 \ ATOM 36 CA CYS B 139 -14.747 53.414 -20.633 1.00 1.25 \ ATOM 37 C CYS B 139 -15.527 52.388 -19.804 1.00 1.25 \ ATOM 38 O CYS B 139 -16.027 51.415 -20.356 1.00 1.25 \ ATOM 39 CB CYS B 139 -15.680 54.299 -21.460 1.00 1.25 \ ATOM 40 SG CYS B 139 -17.047 55.033 -20.524 1.00 1.25 \ ATOM 41 N TYR B 140 -15.590 52.583 -18.468 1.00 -0.67 \ ATOM 42 CA TYR B 140 -16.304 51.677 -17.563 1.00 -0.67 \ ATOM 43 C TYR B 140 -17.812 51.716 -17.794 1.00 -0.67 \ ATOM 44 O TYR B 140 -18.517 50.777 -17.411 1.00 -0.67 \ ATOM 45 CB TYR B 140 -15.978 51.981 -16.086 1.00 -0.67 \ ATOM 46 CG TYR B 140 -14.570 51.644 -15.640 1.00 -0.67 \ ATOM 47 CD1 TYR B 140 -13.899 50.538 -16.158 1.00 -0.67 \ ATOM 48 CD2 TYR B 140 -13.942 52.377 -14.639 1.00 -0.67 \ ATOM 49 CE1 TYR B 140 -12.609 50.217 -15.747 1.00 -0.67 \ ATOM 50 CE2 TYR B 140 -12.655 52.061 -14.212 1.00 -0.67 \ ATOM 51 CZ TYR B 140 -11.990 50.976 -14.766 1.00 -0.67 \ ATOM 52 OH TYR B 140 -10.712 50.645 -14.356 1.00 -0.67 \ ATOM 53 N ASN B 141 -18.310 52.800 -18.405 1.00 1.25 \ ATOM 54 CA ASN B 141 -19.729 52.958 -18.682 1.00 1.25 \ ATOM 55 C ASN B 141 -20.176 52.380 -20.021 1.00 1.25 \ ATOM 56 O ASN B 141 -21.255 51.791 -20.076 1.00 1.25 \ ATOM 57 CB ASN B 141 -20.155 54.409 -18.565 1.00 1.25 \ ATOM 58 CG ASN B 141 -21.641 54.556 -18.449 1.00 1.25 \ ATOM 59 OD1 ASN B 141 -22.261 54.095 -17.491 1.00 1.25 \ ATOM 60 ND2 ASN B 141 -22.252 55.176 -19.439 1.00 1.25 \ ATOM 61 N CYS B 142 -19.376 52.533 -21.090 1.00 1.25 \ ATOM 62 CA CYS B 142 -19.792 52.082 -22.415 1.00 1.25 \ ATOM 63 C CYS B 142 -18.870 51.123 -23.162 1.00 1.25 \ ATOM 64 O CYS B 142 -19.276 50.582 -24.192 1.00 1.25 \ ATOM 65 CB CYS B 142 -20.119 53.291 -23.274 1.00 1.25 \ ATOM 66 SG CYS B 142 -18.666 54.247 -23.753 1.00 1.25 \ ATOM 67 N GLY B 143 -17.636 50.986 -22.706 1.00 1.25 \ ATOM 68 CA GLY B 143 -16.640 50.151 -23.362 1.00 1.25 \ ATOM 69 C GLY B 143 -15.885 50.852 -24.471 1.00 1.25 \ ATOM 70 O GLY B 143 -15.092 50.216 -25.161 1.00 1.25 \ ATOM 71 N GLY B 144 -16.145 52.147 -24.655 1.00 1.25 \ ATOM 72 CA GLY B 144 -15.512 52.978 -25.675 1.00 1.25 \ ATOM 73 C GLY B 144 -14.038 53.180 -25.423 1.00 1.25 \ ATOM 74 O GLY B 144 -13.635 53.276 -24.264 1.00 1.25 \ ATOM 75 N LEU B 145 -13.223 53.254 -26.498 1.00 -1.34 \ ATOM 76 CA LEU B 145 -11.769 53.392 -26.370 1.00 -1.34 \ ATOM 77 C LEU B 145 -11.251 54.831 -26.194 1.00 -1.34 \ ATOM 78 O LEU B 145 -10.195 55.025 -25.579 1.00 -1.34 \ ATOM 79 CB LEU B 145 -11.024 52.680 -27.522 1.00 -1.34 \ ATOM 80 CG LEU B 145 -11.402 51.220 -27.841 1.00 -1.34 \ ATOM 81 CD1 LEU B 145 -10.859 50.804 -29.185 1.00 -1.34 \ ATOM 82 CD2 LEU B 145 -10.939 50.243 -26.761 1.00 -1.34 \ ATOM 83 N ASP B 146 -11.989 55.828 -26.711 1.00 -0.79 \ ATOM 84 CA ASP B 146 -11.588 57.244 -26.708 1.00 -0.79 \ ATOM 85 C ASP B 146 -11.591 58.013 -25.374 1.00 -0.79 \ ATOM 86 O ASP B 146 -10.986 59.088 -25.305 1.00 -0.79 \ ATOM 87 CB ASP B 146 -12.444 58.026 -27.724 1.00 -0.79 \ ATOM 88 CG ASP B 146 -12.250 57.601 -29.165 1.00 -0.79 \ ATOM 89 OD1 ASP B 146 -11.342 58.160 -29.832 1.00 -0.79 \ ATOM 90 OD2 ASP B 146 -13.021 56.723 -29.637 1.00 -0.79 \ ATOM 91 N HIS B 147 -12.324 57.532 -24.359 1.00 1.25 \ ATOM 92 CA HIS B 147 -12.523 58.274 -23.104 1.00 1.25 \ ATOM 93 C HIS B 147 -12.698 57.392 -21.865 1.00 1.25 \ ATOM 94 O HIS B 147 -12.642 56.163 -21.951 1.00 1.25 \ ATOM 95 CB HIS B 147 -13.797 59.139 -23.258 1.00 1.25 \ ATOM 96 CG HIS B 147 -15.040 58.313 -23.468 1.00 1.25 \ ATOM 97 ND1 HIS B 147 -15.261 57.619 -24.657 1.00 1.25 \ ATOM 98 CD2 HIS B 147 -16.043 58.025 -22.604 1.00 1.25 \ ATOM 99 CE1 HIS B 147 -16.398 56.963 -24.481 1.00 1.25 \ ATOM 100 NE2 HIS B 147 -16.907 57.176 -23.264 1.00 1.25 \ ATOM 101 N HIS B 148 -12.972 58.049 -20.721 1.00 0.02 \ ATOM 102 CA HIS B 148 -13.233 57.442 -19.415 1.00 0.02 \ ATOM 103 C HIS B 148 -14.644 57.791 -18.936 1.00 0.02 \ ATOM 104 O HIS B 148 -15.210 58.791 -19.384 1.00 0.02 \ ATOM 105 CB HIS B 148 -12.171 57.869 -18.388 1.00 0.02 \ ATOM 106 CG HIS B 148 -10.847 57.166 -18.533 1.00 0.02 \ ATOM 107 ND1 HIS B 148 -9.721 57.605 -17.850 1.00 0.02 \ ATOM 108 CD2 HIS B 148 -10.513 56.071 -19.263 1.00 0.02 \ ATOM 109 CE1 HIS B 148 -8.747 56.771 -18.189 1.00 0.02 \ ATOM 110 NE2 HIS B 148 -9.179 55.828 -19.033 1.00 0.02 \ ATOM 111 N ALA B 149 -15.203 56.965 -18.024 1.00 0.02 \ ATOM 112 CA ALA B 149 -16.561 57.063 -17.475 1.00 0.02 \ ATOM 113 C ALA B 149 -17.050 58.448 -17.064 1.00 0.02 \ ATOM 114 O ALA B 149 -18.242 58.730 -17.215 1.00 0.02 \ ATOM 115 CB ALA B 149 -16.748 56.074 -16.340 1.00 0.02 \ ATOM 116 N LYS B 150 -16.140 59.306 -16.559 1.00 0.02 \ ATOM 117 CA LYS B 150 -16.432 60.681 -16.131 1.00 0.02 \ ATOM 118 C LYS B 150 -16.855 61.559 -17.324 1.00 0.02 \ ATOM 119 O LYS B 150 -17.717 62.424 -17.166 1.00 0.02 \ ATOM 120 CB LYS B 150 -15.204 61.315 -15.442 1.00 0.02 \ ATOM 121 CG LYS B 150 -14.624 60.525 -14.248 1.00 0.02 \ ATOM 122 CD LYS B 150 -13.091 60.284 -14.365 1.00 0.02 \ ATOM 123 CE LYS B 150 -12.296 60.713 -13.154 1.00 0.02 \ ATOM 124 NZ LYS B 150 -10.831 60.601 -13.384 1.00 0.02 \ ATOM 125 N GLU B 151 -16.243 61.330 -18.511 1.00 0.02 \ ATOM 126 CA GLU B 151 -16.492 62.084 -19.748 1.00 0.02 \ ATOM 127 C GLU B 151 -17.465 61.387 -20.719 1.00 0.02 \ ATOM 128 O GLU B 151 -17.633 61.860 -21.851 1.00 0.02 \ ATOM 129 CB GLU B 151 -15.169 62.387 -20.484 1.00 0.02 \ ATOM 130 CG GLU B 151 -14.101 63.080 -19.655 1.00 0.02 \ ATOM 131 CD GLU B 151 -13.019 62.165 -19.114 1.00 0.02 \ ATOM 132 OE1 GLU B 151 -12.569 61.256 -19.852 1.00 0.02 \ ATOM 133 OE2 GLU B 151 -12.588 62.391 -17.961 1.00 0.02 \ ATOM 134 N CYS B 152 -18.099 60.271 -20.286 1.00 1.25 \ ATOM 135 CA CYS B 152 -19.023 59.501 -21.121 1.00 1.25 \ ATOM 136 C CYS B 152 -20.289 60.272 -21.465 1.00 1.25 \ ATOM 137 O CYS B 152 -20.951 60.817 -20.575 1.00 1.25 \ ATOM 138 CB CYS B 152 -19.331 58.142 -20.505 1.00 1.25 \ ATOM 139 SG CYS B 152 -20.072 56.960 -21.661 1.00 1.25 \ ATOM 140 N LYS B 153 -20.593 60.346 -22.770 1.00 -2.08 \ ATOM 141 CA LYS B 153 -21.751 61.060 -23.307 1.00 -2.08 \ ATOM 142 C LYS B 153 -23.036 60.216 -23.246 1.00 -2.08 \ ATOM 143 O LYS B 153 -24.139 60.748 -23.398 1.00 -2.08 \ ATOM 144 CB LYS B 153 -21.457 61.538 -24.741 1.00 -2.08 \ ATOM 145 CG LYS B 153 -20.493 62.716 -24.784 1.00 -2.08 \ ATOM 146 CD LYS B 153 -20.088 63.115 -26.188 1.00 -2.08 \ ATOM 147 CE LYS B 153 -19.129 64.288 -26.147 1.00 -2.08 \ ATOM 148 NZ LYS B 153 -19.288 65.212 -27.311 1.00 -2.08 \ ATOM 149 N LEU B 154 -22.884 58.899 -23.016 1.00 0.02 \ ATOM 150 CA LEU B 154 -23.996 57.961 -22.933 1.00 0.02 \ ATOM 151 C LEU B 154 -24.668 57.929 -21.549 1.00 0.02 \ ATOM 152 O LEU B 154 -24.012 58.294 -20.566 1.00 0.02 \ ATOM 153 CB LEU B 154 -23.533 56.583 -23.388 1.00 0.02 \ ATOM 154 CG LEU B 154 -23.419 56.470 -24.891 1.00 0.02 \ ATOM 155 CD1 LEU B 154 -22.290 55.567 -25.313 1.00 0.02 \ ATOM 156 CD2 LEU B 154 -24.699 56.019 -25.468 1.00 0.02 \ ATOM 157 N PRO B 155 -25.982 57.559 -21.441 1.00 0.02 \ ATOM 158 CA PRO B 155 -26.626 57.540 -20.106 1.00 0.02 \ ATOM 159 C PRO B 155 -25.985 56.489 -19.194 1.00 0.02 \ ATOM 160 O PRO B 155 -25.516 55.463 -19.719 1.00 0.02 \ ATOM 161 CB PRO B 155 -28.096 57.231 -20.401 1.00 0.02 \ ATOM 162 CG PRO B 155 -28.113 56.609 -21.761 1.00 0.02 \ ATOM 163 CD PRO B 155 -26.910 57.106 -22.506 1.00 0.02 \ ATOM 164 N PRO B 156 -25.884 56.741 -17.855 1.00 0.02 \ ATOM 165 CA PRO B 156 -25.196 55.775 -16.972 1.00 0.02 \ ATOM 166 C PRO B 156 -25.752 54.367 -17.050 1.00 0.02 \ ATOM 167 O PRO B 156 -26.964 54.147 -17.057 1.00 0.02 \ ATOM 168 CB PRO B 156 -25.284 56.399 -15.578 1.00 0.02 \ ATOM 169 CG PRO B 156 -26.336 57.409 -15.678 1.00 0.02 \ ATOM 170 CD PRO B 156 -26.361 57.906 -17.089 1.00 0.02 \ ATOM 171 N GLN B 157 -24.836 53.430 -17.205 1.00 0.02 \ ATOM 172 CA GLN B 157 -25.097 52.016 -17.372 1.00 0.02 \ ATOM 173 C GLN B 157 -24.779 51.281 -16.071 1.00 0.02 \ ATOM 174 O GLN B 157 -23.921 51.747 -15.320 1.00 0.02 \ ATOM 175 CB GLN B 157 -24.201 51.492 -18.501 1.00 0.02 \ ATOM 176 CG GLN B 157 -24.757 51.753 -19.891 1.00 0.02 \ ATOM 177 CD GLN B 157 -25.687 50.657 -20.300 1.00 0.02 \ ATOM 178 OE1 GLN B 157 -25.448 49.464 -20.040 1.00 0.02 \ ATOM 179 NE2 GLN B 157 -26.774 51.041 -20.944 1.00 0.02 \ """, "e3trzB3_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e3trzB3_csv", state=0, origin=1) cmd.zoom("e3trzB3_csv", animate=-1)