cmd.read_pdbstr("""\ ATOM 1 N PRO D 158 -25.355 48.046 43.197 1.00 0.74 \ ATOM 2 CA PRO D 158 -25.015 47.336 44.443 1.00 0.74 \ ATOM 3 C PRO D 158 -23.575 46.805 44.423 1.00 0.74 \ ATOM 4 O PRO D 158 -23.026 46.568 43.336 1.00 0.74 \ ATOM 5 CB PRO D 158 -26.032 46.196 44.474 1.00 0.74 \ ATOM 6 CG PRO D 158 -26.401 45.979 43.057 1.00 0.74 \ ATOM 7 CD PRO D 158 -26.410 47.335 42.445 1.00 0.74 \ ATOM 8 N LYS D 159 -22.953 46.638 45.618 1.00 0.74 \ ATOM 9 CA LYS D 159 -21.588 46.133 45.725 1.00 0.74 \ ATOM 10 C LYS D 159 -21.491 44.716 45.153 1.00 0.74 \ ATOM 11 O LYS D 159 -22.364 43.878 45.392 1.00 0.74 \ ATOM 12 CB LYS D 159 -21.092 46.210 47.163 1.00 0.74 \ ATOM 13 CG LYS D 159 -20.579 47.593 47.567 1.00 0.74 \ ATOM 14 CD LYS D 159 -20.159 47.597 49.029 1.00 0.74 \ ATOM 15 CE LYS D 159 -19.624 48.915 49.521 1.00 0.74 \ ATOM 16 NZ LYS D 159 -19.777 49.047 50.998 1.00 0.74 \ ATOM 17 N LYS D 160 -20.474 44.489 44.317 1.00 0.74 \ ATOM 18 CA LYS D 160 -20.257 43.207 43.644 1.00 0.74 \ ATOM 19 C LYS D 160 -18.941 42.629 44.084 1.00 0.74 \ ATOM 20 O LYS D 160 -18.023 43.374 44.381 1.00 0.74 \ ATOM 21 CB LYS D 160 -20.277 43.374 42.108 1.00 0.74 \ ATOM 22 CG LYS D 160 -21.638 43.754 41.581 1.00 0.74 \ ATOM 23 CD LYS D 160 -21.607 44.321 40.192 1.00 0.74 \ ATOM 24 CE LYS D 160 -22.087 45.755 40.146 1.00 0.74 \ ATOM 25 NZ LYS D 160 -20.951 46.722 40.049 1.00 0.74 \ ATOM 26 N CYS D 161 -18.839 41.304 44.111 1.00 -0.59 \ ATOM 27 CA CYS D 161 -17.619 40.607 44.481 1.00 -0.59 \ ATOM 28 C CYS D 161 -16.483 41.072 43.580 1.00 -0.59 \ ATOM 29 O CYS D 161 -16.635 41.107 42.357 1.00 -0.59 \ ATOM 30 CB CYS D 161 -17.831 39.105 44.378 1.00 -0.59 \ ATOM 31 SG CYS D 161 -16.363 38.130 44.743 1.00 -0.59 \ ATOM 32 N HIS D 162 -15.377 41.504 44.185 1.00 0.74 \ ATOM 33 CA HIS D 162 -14.220 41.976 43.431 1.00 0.74 \ ATOM 34 C HIS D 162 -13.650 40.935 42.489 1.00 0.74 \ ATOM 35 O HIS D 162 -13.123 41.295 41.435 1.00 0.74 \ ATOM 36 CB HIS D 162 -13.131 42.534 44.350 1.00 0.74 \ ATOM 37 CG HIS D 162 -13.458 43.881 44.907 1.00 0.74 \ ATOM 38 ND1 HIS D 162 -13.181 44.200 46.226 1.00 0.74 \ ATOM 39 CD2 HIS D 162 -14.050 44.945 44.312 1.00 0.74 \ ATOM 40 CE1 HIS D 162 -13.593 45.447 46.384 1.00 0.74 \ ATOM 41 NE2 HIS D 162 -14.133 45.933 45.259 1.00 0.74 \ ATOM 42 N PHE D 163 -13.795 39.658 42.841 1.00 0.74 \ ATOM 43 CA PHE D 163 -13.298 38.559 42.052 1.00 0.74 \ ATOM 44 C PHE D 163 -14.254 38.005 40.989 1.00 0.74 \ ATOM 45 O PHE D 163 -13.798 37.759 39.880 1.00 0.74 \ ATOM 46 CB PHE D 163 -12.800 37.460 42.966 1.00 0.74 \ ATOM 47 CG PHE D 163 -12.023 36.409 42.229 1.00 0.74 \ ATOM 48 CD1 PHE D 163 -10.734 36.664 41.776 1.00 0.74 \ ATOM 49 CD2 PHE D 163 -12.581 35.165 41.971 1.00 0.74 \ ATOM 50 CE1 PHE D 163 -10.022 35.697 41.075 1.00 0.74 \ ATOM 51 CE2 PHE D 163 -11.856 34.190 41.281 1.00 0.74 \ ATOM 52 CZ PHE D 163 -10.579 34.464 40.841 1.00 0.74 \ ATOM 53 N CYS D 164 -15.546 37.774 41.315 1.00 0.74 \ ATOM 54 CA CYS D 164 -16.528 37.162 40.404 1.00 0.74 \ ATOM 55 C CYS D 164 -17.744 38.029 40.059 1.00 0.74 \ ATOM 56 O CYS D 164 -18.603 37.579 39.296 1.00 0.74 \ ATOM 57 CB CYS D 164 -16.960 35.804 40.943 1.00 0.74 \ ATOM 58 SG CYS D 164 -18.066 35.912 42.365 1.00 0.74 \ ATOM 59 N GLN D 165 -17.842 39.243 40.627 1.00 0.74 \ ATOM 60 CA GLN D 165 -18.935 40.187 40.400 1.00 0.74 \ ATOM 61 C GLN D 165 -20.303 39.771 40.963 1.00 0.74 \ ATOM 62 O GLN D 165 -21.295 40.438 40.661 1.00 0.74 \ ATOM 63 CB GLN D 165 -19.058 40.573 38.935 1.00 0.74 \ ATOM 64 CG GLN D 165 -18.431 41.885 38.586 1.00 0.74 \ ATOM 65 CD GLN D 165 -18.653 42.237 37.135 1.00 0.74 \ ATOM 66 OE1 GLN D 165 -18.382 43.364 36.749 1.00 0.74 \ ATOM 67 NE2 GLN D 165 -19.131 41.285 36.284 1.00 0.74 \ ATOM 68 N SER D 166 -20.366 38.720 41.789 1.00 0.74 \ ATOM 69 CA SER D 166 -21.606 38.295 42.411 1.00 0.74 \ ATOM 70 C SER D 166 -22.114 39.388 43.313 1.00 0.74 \ ATOM 71 O SER D 166 -21.324 40.030 44.001 1.00 0.74 \ ATOM 72 CB SER D 166 -21.389 37.020 43.218 1.00 0.74 \ ATOM 73 OG SER D 166 -22.464 36.708 44.090 1.00 0.74 \ ATOM 74 N ILE D 167 -23.443 39.596 43.310 1.00 -0.58 \ ATOM 75 CA ILE D 167 -24.112 40.586 44.157 1.00 -0.58 \ ATOM 76 C ILE D 167 -24.451 39.980 45.511 1.00 -0.58 \ ATOM 77 O ILE D 167 -24.808 40.719 46.427 1.00 -0.58 \ ATOM 78 CB ILE D 167 -25.355 41.197 43.471 1.00 -0.58 \ ATOM 79 CG1 ILE D 167 -26.280 40.108 42.890 1.00 -0.58 \ ATOM 80 CG2 ILE D 167 -24.953 42.193 42.395 1.00 -0.58 \ ATOM 81 CD1 ILE D 167 -27.749 40.327 43.173 1.00 -0.58 \ ATOM 82 N ASN D 168 -24.293 38.644 45.645 1.00 -2.43 \ ATOM 83 CA ASN D 168 -24.621 37.841 46.829 1.00 -2.43 \ ATOM 84 C ASN D 168 -23.555 37.765 47.932 1.00 -2.43 \ ATOM 85 O ASN D 168 -23.882 37.511 49.097 1.00 -2.43 \ ATOM 86 CB ASN D 168 -25.053 36.441 46.400 1.00 -2.43 \ ATOM 87 CG ASN D 168 -26.261 36.460 45.502 1.00 -2.43 \ ATOM 88 OD1 ASN D 168 -27.250 37.174 45.755 1.00 -2.43 \ ATOM 89 ND2 ASN D 168 -26.200 35.684 44.424 1.00 -2.43 \ ATOM 90 N HIS D 169 -22.287 37.926 47.561 1.00 0.74 \ ATOM 91 CA HIS D 169 -21.175 37.877 48.509 1.00 0.74 \ ATOM 92 C HIS D 169 -20.119 38.913 48.198 1.00 0.74 \ ATOM 93 O HIS D 169 -20.151 39.582 47.165 1.00 0.74 \ ATOM 94 CB HIS D 169 -20.552 36.470 48.571 1.00 0.74 \ ATOM 95 CG HIS D 169 -19.900 36.032 47.310 1.00 0.74 \ ATOM 96 ND1 HIS D 169 -20.523 35.158 46.443 1.00 0.74 \ ATOM 97 CD2 HIS D 169 -18.696 36.376 46.796 1.00 0.74 \ ATOM 98 CE1 HIS D 169 -19.684 35.002 45.426 1.00 0.74 \ ATOM 99 NE2 HIS D 169 -18.573 35.721 45.593 1.00 0.74 \ ATOM 100 N MET D 170 -19.177 39.031 49.092 1.00 0.74 \ ATOM 101 CA MET D 170 -18.037 39.891 48.883 1.00 0.74 \ ATOM 102 C MET D 170 -16.764 39.064 48.875 1.00 0.74 \ ATOM 103 O MET D 170 -16.725 37.975 49.460 1.00 0.74 \ ATOM 104 CB MET D 170 -18.017 41.064 49.844 1.00 0.74 \ ATOM 105 CG MET D 170 -19.024 42.087 49.459 1.00 0.74 \ ATOM 106 SD MET D 170 -18.818 43.572 50.433 1.00 0.74 \ ATOM 107 CE MET D 170 -20.510 44.266 50.225 1.00 0.74 \ ATOM 108 N VAL D 171 -15.758 39.545 48.110 1.00 0.74 \ ATOM 109 CA VAL D 171 -14.474 38.889 47.883 1.00 0.74 \ ATOM 110 C VAL D 171 -13.917 38.116 49.049 1.00 0.74 \ ATOM 111 O VAL D 171 -13.517 36.978 48.850 1.00 0.74 \ ATOM 112 CB VAL D 171 -13.458 39.748 47.127 1.00 0.74 \ ATOM 113 CG1 VAL D 171 -12.813 40.799 48.027 1.00 0.74 \ ATOM 114 CG2 VAL D 171 -12.428 38.868 46.439 1.00 0.74 \ ATOM 115 N ALA D 172 -14.024 38.660 50.267 1.00 0.74 \ ATOM 116 CA ALA D 172 -13.559 37.999 51.483 1.00 0.74 \ ATOM 117 C ALA D 172 -14.244 36.649 51.771 1.00 0.74 \ ATOM 118 O ALA D 172 -13.711 35.852 52.531 1.00 0.74 \ ATOM 119 CB ALA D 172 -13.702 38.935 52.670 1.00 0.74 \ ATOM 120 N SER D 173 -15.382 36.378 51.142 1.00 -0.63 \ ATOM 121 CA SER D 173 -16.150 35.147 51.320 1.00 -0.63 \ ATOM 122 C SER D 173 -16.474 34.471 49.968 1.00 -0.63 \ ATOM 123 O SER D 173 -17.354 33.609 49.907 1.00 -0.63 \ ATOM 124 CB SER D 173 -17.429 35.445 52.101 1.00 -0.63 \ ATOM 125 OG SER D 173 -17.147 36.144 53.305 1.00 -0.63 \ ATOM 126 N CYS D 174 -15.742 34.847 48.893 1.00 0.74 \ ATOM 127 CA CYS D 174 -15.908 34.322 47.531 1.00 0.74 \ ATOM 128 C CYS D 174 -15.599 32.830 47.400 1.00 0.74 \ ATOM 129 O CYS D 174 -14.458 32.417 47.610 1.00 0.74 \ ATOM 130 CB CYS D 174 -15.120 35.149 46.521 1.00 0.74 \ ATOM 131 SG CYS D 174 -15.396 34.673 44.795 1.00 0.74 \ ATOM 132 N PRO D 175 -16.598 32.013 47.012 1.00 0.74 \ ATOM 133 CA PRO D 175 -16.356 30.565 46.869 1.00 0.74 \ ATOM 134 C PRO D 175 -15.381 30.239 45.752 1.00 0.74 \ ATOM 135 O PRO D 175 -14.680 29.234 45.815 1.00 0.74 \ ATOM 136 CB PRO D 175 -17.744 30.010 46.537 1.00 0.74 \ ATOM 137 CG PRO D 175 -18.705 31.071 46.942 1.00 0.74 \ ATOM 138 CD PRO D 175 -18.002 32.351 46.707 1.00 0.74 \ ATOM 139 N LEU D 176 -15.355 31.089 44.726 1.00 -2.00 \ ATOM 140 CA LEU D 176 -14.509 30.938 43.548 1.00 -2.00 \ ATOM 141 C LEU D 176 -13.045 31.278 43.832 1.00 -2.00 \ ATOM 142 O LEU D 176 -12.170 30.714 43.178 1.00 -2.00 \ ATOM 143 CB LEU D 176 -15.084 31.764 42.384 1.00 -2.00 \ ATOM 144 CG LEU D 176 -14.530 31.537 40.986 1.00 -2.00 \ ATOM 145 CD1 LEU D 176 -14.926 30.155 40.438 1.00 -2.00 \ ATOM 146 CD2 LEU D 176 -15.015 32.629 40.051 1.00 -2.00 \ ATOM 147 N LYS D 177 -12.770 32.175 44.807 1.00 0.74 \ ATOM 148 CA LYS D 177 -11.395 32.521 45.187 1.00 0.74 \ ATOM 149 C LYS D 177 -10.759 31.331 45.881 1.00 0.74 \ ATOM 150 O LYS D 177 -9.594 31.027 45.609 1.00 0.74 \ ATOM 151 CB LYS D 177 -11.341 33.759 46.088 1.00 0.74 \ ATOM 152 CG LYS D 177 -10.844 35.010 45.382 1.00 0.74 \ ATOM 153 CD LYS D 177 -9.335 35.003 45.167 1.00 0.74 \ ATOM 154 CE LYS D 177 -8.760 36.391 45.178 1.00 0.74 \ ATOM 155 NZ LYS D 177 -8.488 36.831 46.570 1.00 0.74 \ ATOM 156 N ALA D 178 -11.549 30.618 46.725 1.00 -0.59 \ ATOM 157 CA ALA D 178 -11.137 29.400 47.430 1.00 -0.59 \ ATOM 158 C ALA D 178 -10.520 28.358 46.459 1.00 -0.59 \ ATOM 159 O ALA D 178 -9.543 27.690 46.815 1.00 -0.59 \ ATOM 160 CB ALA D 178 -12.325 28.797 48.174 1.00 -0.59 \ ATOM 161 N GLN D 179 -11.063 28.271 45.223 1.00 -0.58 \ ATOM 162 CA GLN D 179 -10.593 27.383 44.152 1.00 -0.58 \ ATOM 163 C GLN D 179 -9.386 28.006 43.428 1.00 -0.58 \ ATOM 164 O GLN D 179 -8.414 28.429 44.058 1.00 -0.58 \ ATOM 165 CB GLN D 179 -11.721 27.122 43.135 1.00 -0.58 \ ATOM 166 CG GLN D 179 -12.917 26.320 43.666 1.00 -0.58 \ ATOM 167 CD GLN D 179 -14.142 26.440 42.773 1.00 -0.58 \ ATOM 168 OE1 GLN D 179 -15.190 26.949 43.187 1.00 -0.58 \ ATOM 169 NE2 GLN D 179 -14.048 25.978 41.526 1.00 -0.58 \ """, "e3trzD2_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e3trzD2_csv", state=0, origin=1) cmd.zoom("e3trzD2_csv", animate=-1)