cmd.read_pdbstr("""\ ATOM 1 N SER D 120 -10.879 37.183 30.981 1.00 -1.77 \ ATOM 2 CA SER D 120 -9.591 36.525 31.336 1.00 -1.77 \ ATOM 3 C SER D 120 -8.290 37.039 30.580 1.00 -1.77 \ ATOM 4 O SER D 120 -8.355 37.391 29.393 1.00 -1.77 \ ATOM 5 CB SER D 120 -9.711 35.015 31.137 1.00 -1.77 \ ATOM 6 OG SER D 120 -10.980 34.614 30.633 1.00 -1.77 \ ATOM 7 N GLU D 121 -7.103 36.990 31.267 1.00 -1.33 \ ATOM 8 CA GLU D 121 -5.735 37.382 30.800 1.00 -1.33 \ ATOM 9 C GLU D 121 -5.660 38.794 30.193 1.00 -1.33 \ ATOM 10 O GLU D 121 -4.721 39.540 30.469 1.00 -1.33 \ ATOM 11 CB GLU D 121 -5.071 36.294 29.892 1.00 -1.33 \ ATOM 12 CG GLU D 121 -3.617 36.530 29.448 1.00 -1.33 \ ATOM 13 CD GLU D 121 -2.912 35.442 28.632 1.00 -1.33 \ ATOM 14 OE1 GLU D 121 -2.456 35.720 27.493 1.00 -1.33 \ ATOM 15 OE2 GLU D 121 -2.758 34.321 29.170 1.00 -1.33 \ ATOM 16 N ASP D 137 -7.765 46.197 36.906 1.00 -1.33 \ ATOM 17 CA ASP D 137 -8.178 47.519 37.407 1.00 -1.33 \ ATOM 18 C ASP D 137 -9.309 48.211 36.576 1.00 -1.33 \ ATOM 19 O ASP D 137 -9.075 48.704 35.467 1.00 -1.33 \ ATOM 20 CB ASP D 137 -6.955 48.419 37.737 1.00 -1.33 \ ATOM 21 CG ASP D 137 -7.015 49.869 37.267 1.00 -1.33 \ ATOM 22 OD1 ASP D 137 -6.700 50.122 36.073 1.00 -1.33 \ ATOM 23 OD2 ASP D 137 -7.338 50.758 38.104 1.00 -1.33 \ ATOM 24 N ARG D 138 -10.543 48.215 37.155 1.00 0.02 \ ATOM 25 CA ARG D 138 -11.816 48.681 36.582 1.00 0.02 \ ATOM 26 C ARG D 138 -12.796 49.247 37.647 1.00 0.02 \ ATOM 27 O ARG D 138 -12.814 48.750 38.766 1.00 0.02 \ ATOM 28 CB ARG D 138 -12.485 47.494 35.838 1.00 0.02 \ ATOM 29 CG ARG D 138 -12.820 46.280 36.728 1.00 0.02 \ ATOM 30 CD ARG D 138 -13.061 44.958 36.007 1.00 0.02 \ ATOM 31 NE ARG D 138 -13.443 43.917 36.972 1.00 0.02 \ ATOM 32 CZ ARG D 138 -12.586 43.140 37.638 1.00 0.02 \ ATOM 33 NH1 ARG D 138 -13.033 42.247 38.515 1.00 0.02 \ ATOM 34 NH2 ARG D 138 -11.277 43.244 37.425 1.00 0.02 \ ATOM 35 N CYS D 139 -13.647 50.228 37.276 1.00 1.25 \ ATOM 36 CA CYS D 139 -14.657 50.886 38.133 1.00 1.25 \ ATOM 37 C CYS D 139 -15.456 49.911 39.019 1.00 1.25 \ ATOM 38 O CYS D 139 -15.994 48.930 38.521 1.00 1.25 \ ATOM 39 CB CYS D 139 -15.579 51.773 37.296 1.00 1.25 \ ATOM 40 SG CYS D 139 -16.928 52.551 38.223 1.00 1.25 \ ATOM 41 N TYR D 140 -15.496 50.171 40.341 1.00 -0.67 \ ATOM 42 CA TYR D 140 -16.221 49.327 41.287 1.00 -0.67 \ ATOM 43 C TYR D 140 -17.730 49.397 41.060 1.00 -0.67 \ ATOM 44 O TYR D 140 -18.453 48.475 41.461 1.00 -0.67 \ ATOM 45 CB TYR D 140 -15.878 49.681 42.752 1.00 -0.67 \ ATOM 46 CG TYR D 140 -14.472 49.328 43.204 1.00 -0.67 \ ATOM 47 CD1 TYR D 140 -13.821 48.198 42.712 1.00 -0.67 \ ATOM 48 CD2 TYR D 140 -13.821 50.080 44.178 1.00 -0.67 \ ATOM 49 CE1 TYR D 140 -12.524 47.873 43.117 1.00 -0.67 \ ATOM 50 CE2 TYR D 140 -12.532 49.756 44.605 1.00 -0.67 \ ATOM 51 CZ TYR D 140 -11.888 48.647 44.075 1.00 -0.67 \ ATOM 52 OH TYR D 140 -10.619 48.308 44.499 1.00 -0.67 \ ATOM 53 N ASN D 141 -18.211 50.489 40.426 1.00 1.25 \ ATOM 54 CA ASN D 141 -19.633 50.680 40.166 1.00 1.25 \ ATOM 55 C ASN D 141 -20.126 50.075 38.860 1.00 1.25 \ ATOM 56 O ASN D 141 -21.216 49.519 38.849 1.00 1.25 \ ATOM 57 CB ASN D 141 -20.025 52.145 40.264 1.00 1.25 \ ATOM 58 CG ASN D 141 -21.511 52.336 40.413 1.00 1.25 \ ATOM 59 OD1 ASN D 141 -22.130 51.920 41.402 1.00 1.25 \ ATOM 60 ND2 ASN D 141 -22.125 52.949 39.421 1.00 1.25 \ ATOM 61 N CYS D 142 -19.353 50.162 37.776 1.00 1.25 \ ATOM 62 CA CYS D 142 -19.796 49.700 36.467 1.00 1.25 \ ATOM 63 C CYS D 142 -18.911 48.695 35.730 1.00 1.25 \ ATOM 64 O CYS D 142 -19.356 48.133 34.725 1.00 1.25 \ ATOM 65 CB CYS D 142 -20.099 50.907 35.585 1.00 1.25 \ ATOM 66 SG CYS D 142 -18.629 51.825 35.054 1.00 1.25 \ ATOM 67 N GLY D 143 -17.663 48.543 36.157 1.00 1.25 \ ATOM 68 CA GLY D 143 -16.707 47.650 35.517 1.00 1.25 \ ATOM 69 C GLY D 143 -15.936 48.298 34.387 1.00 1.25 \ ATOM 70 O GLY D 143 -15.154 47.622 33.716 1.00 1.25 \ ATOM 71 N GLY D 144 -16.176 49.594 34.162 1.00 1.25 \ ATOM 72 CA GLY D 144 -15.526 50.379 33.113 1.00 1.25 \ ATOM 73 C GLY D 144 -14.038 50.528 33.340 1.00 1.25 \ ATOM 74 O GLY D 144 -13.618 50.632 34.491 1.00 1.25 \ ATOM 75 N LEU D 145 -13.225 50.548 32.262 1.00 -1.34 \ ATOM 76 CA LEU D 145 -11.758 50.646 32.375 1.00 -1.34 \ ATOM 77 C LEU D 145 -11.197 52.068 32.504 1.00 -1.34 \ ATOM 78 O LEU D 145 -10.126 52.246 33.102 1.00 -1.34 \ ATOM 79 CB LEU D 145 -11.030 49.892 31.244 1.00 -1.34 \ ATOM 80 CG LEU D 145 -11.441 48.434 30.946 1.00 -1.34 \ ATOM 81 CD1 LEU D 145 -10.935 48.006 29.571 1.00 -1.34 \ ATOM 82 CD2 LEU D 145 -11.009 47.445 32.065 1.00 -1.34 \ ATOM 83 N ASP D 146 -11.917 53.072 31.969 1.00 -0.79 \ ATOM 84 CA ASP D 146 -11.487 54.478 31.932 1.00 -0.79 \ ATOM 85 C ASP D 146 -11.431 55.264 33.255 1.00 -0.79 \ ATOM 86 O ASP D 146 -10.773 56.307 33.294 1.00 -0.79 \ ATOM 87 CB ASP D 146 -12.365 55.257 30.934 1.00 -0.79 \ ATOM 88 CG ASP D 146 -12.236 54.806 29.494 1.00 -0.79 \ ATOM 89 OD1 ASP D 146 -11.345 55.328 28.786 1.00 -0.79 \ ATOM 90 OD2 ASP D 146 -12.998 53.905 29.084 1.00 -0.79 \ ATOM 91 N HIS D 147 -12.161 54.825 34.301 1.00 1.25 \ ATOM 92 CA HIS D 147 -12.306 55.593 35.545 1.00 1.25 \ ATOM 93 C HIS D 147 -12.493 54.749 36.809 1.00 1.25 \ ATOM 94 O HIS D 147 -12.474 53.515 36.757 1.00 1.25 \ ATOM 95 CB HIS D 147 -13.544 56.504 35.390 1.00 1.25 \ ATOM 96 CG HIS D 147 -14.821 55.723 35.223 1.00 1.25 \ ATOM 97 ND1 HIS D 147 -15.088 55.013 34.058 1.00 1.25 \ ATOM 98 CD2 HIS D 147 -15.824 55.507 36.108 1.00 1.25 \ ATOM 99 CE1 HIS D 147 -16.245 54.407 34.271 1.00 1.25 \ ATOM 100 NE2 HIS D 147 -16.729 54.677 35.487 1.00 1.25 \ ATOM 101 N HIS D 148 -12.730 55.451 37.940 1.00 0.02 \ ATOM 102 CA HIS D 148 -12.992 54.896 39.268 1.00 0.02 \ ATOM 103 C HIS D 148 -14.376 55.323 39.737 1.00 0.02 \ ATOM 104 O HIS D 148 -14.894 56.350 39.284 1.00 0.02 \ ATOM 105 CB HIS D 148 -11.908 55.318 40.284 1.00 0.02 \ ATOM 106 CG HIS D 148 -10.599 54.592 40.136 1.00 0.02 \ ATOM 107 ND1 HIS D 148 -9.448 55.050 40.761 1.00 0.02 \ ATOM 108 CD2 HIS D 148 -10.303 53.457 39.451 1.00 0.02 \ ATOM 109 CE1 HIS D 148 -8.495 54.186 40.435 1.00 0.02 \ ATOM 110 NE2 HIS D 148 -8.963 53.207 39.652 1.00 0.02 \ ATOM 111 N ALA D 149 -14.972 54.520 40.633 1.00 0.02 \ ATOM 112 CA ALA D 149 -16.322 54.676 41.185 1.00 0.02 \ ATOM 113 C ALA D 149 -16.745 56.084 41.596 1.00 0.02 \ ATOM 114 O ALA D 149 -17.908 56.423 41.431 1.00 0.02 \ ATOM 115 CB ALA D 149 -16.549 53.688 42.321 1.00 0.02 \ ATOM 116 N LYS D 150 -15.812 56.896 42.110 1.00 0.02 \ ATOM 117 CA LYS D 150 -16.045 58.285 42.548 1.00 0.02 \ ATOM 118 C LYS D 150 -16.491 59.163 41.370 1.00 0.02 \ ATOM 119 O LYS D 150 -17.278 60.087 41.562 1.00 0.02 \ ATOM 120 CB LYS D 150 -14.778 58.872 43.217 1.00 0.02 \ ATOM 121 CG LYS D 150 -14.277 58.079 44.433 1.00 0.02 \ ATOM 122 CD LYS D 150 -12.771 57.769 44.359 1.00 0.02 \ ATOM 123 CE LYS D 150 -12.125 57.695 45.724 1.00 0.02 \ ATOM 124 NZ LYS D 150 -10.656 57.469 45.636 1.00 0.02 \ ATOM 125 N GLU D 151 -16.002 58.851 40.155 1.00 0.02 \ ATOM 126 CA GLU D 151 -16.337 59.575 38.927 1.00 0.02 \ ATOM 127 C GLU D 151 -17.071 58.663 37.936 1.00 0.02 \ ATOM 128 O GLU D 151 -16.736 58.629 36.746 1.00 0.02 \ ATOM 129 CB GLU D 151 -15.110 60.261 38.264 1.00 0.02 \ ATOM 130 CG GLU D 151 -13.863 60.412 39.121 1.00 0.02 \ ATOM 131 CD GLU D 151 -12.935 59.213 39.108 1.00 0.02 \ ATOM 132 OE1 GLU D 151 -12.735 58.616 38.023 1.00 0.02 \ ATOM 133 OE2 GLU D 151 -12.398 58.876 40.189 1.00 0.02 \ ATOM 134 N CYS D 152 -18.072 57.915 38.430 1.00 1.25 \ ATOM 135 CA CYS D 152 -18.869 57.040 37.579 1.00 1.25 \ ATOM 136 C CYS D 152 -20.146 57.804 37.231 1.00 1.25 \ ATOM 137 O CYS D 152 -20.837 58.301 38.130 1.00 1.25 \ ATOM 138 CB CYS D 152 -19.159 55.701 38.254 1.00 1.25 \ ATOM 139 SG CYS D 152 -20.088 54.538 37.220 1.00 1.25 \ ATOM 140 N LYS D 153 -20.414 57.954 35.919 1.00 -2.08 \ ATOM 141 CA LYS D 153 -21.573 58.690 35.409 1.00 -2.08 \ ATOM 142 C LYS D 153 -22.884 57.898 35.534 1.00 -2.08 \ ATOM 143 O LYS D 153 -23.977 58.465 35.434 1.00 -2.08 \ ATOM 144 CB LYS D 153 -21.316 59.139 33.960 1.00 -2.08 \ ATOM 145 CG LYS D 153 -20.525 60.437 33.869 1.00 -2.08 \ ATOM 146 CD LYS D 153 -19.838 60.611 32.525 1.00 -2.08 \ ATOM 147 CE LYS D 153 -18.975 61.848 32.533 1.00 -2.08 \ ATOM 148 NZ LYS D 153 -18.049 61.872 31.377 1.00 -2.08 \ ATOM 149 N LEU D 154 -22.764 56.585 35.767 1.00 0.02 \ ATOM 150 CA LEU D 154 -23.893 55.676 35.904 1.00 0.02 \ ATOM 151 C LEU D 154 -24.534 55.699 37.304 1.00 0.02 \ ATOM 152 O LEU D 154 -23.852 56.065 38.266 1.00 0.02 \ ATOM 153 CB LEU D 154 -23.474 54.275 35.474 1.00 0.02 \ ATOM 154 CG LEU D 154 -23.385 54.132 33.969 1.00 0.02 \ ATOM 155 CD1 LEU D 154 -22.336 53.145 33.557 1.00 0.02 \ ATOM 156 CD2 LEU D 154 -24.714 53.772 33.391 1.00 0.02 \ ATOM 157 N PRO D 155 -25.852 55.379 37.447 1.00 0.02 \ ATOM 158 CA PRO D 155 -26.465 55.415 38.794 1.00 0.02 \ ATOM 159 C PRO D 155 -25.831 54.361 39.714 1.00 0.02 \ ATOM 160 O PRO D 155 -25.383 53.320 39.203 1.00 0.02 \ ATOM 161 CB PRO D 155 -27.950 55.148 38.525 1.00 0.02 \ ATOM 162 CG PRO D 155 -27.996 54.434 37.180 1.00 0.02 \ ATOM 163 CD PRO D 155 -26.817 54.925 36.410 1.00 0.02 \ ATOM 164 N PRO D 156 -25.729 54.614 41.042 1.00 0.02 \ ATOM 165 CA PRO D 156 -25.045 53.654 41.927 1.00 0.02 \ ATOM 166 C PRO D 156 -25.620 52.259 41.872 1.00 0.02 \ ATOM 167 O PRO D 156 -26.840 52.060 41.879 1.00 0.02 \ ATOM 168 CB PRO D 156 -25.115 54.291 43.322 1.00 0.02 \ ATOM 169 CG PRO D 156 -26.122 55.319 43.228 1.00 0.02 \ ATOM 170 CD PRO D 156 -26.193 55.788 41.798 1.00 0.02 \ ATOM 171 N GLN D 157 -24.710 51.306 41.717 1.00 0.02 \ ATOM 172 CA GLN D 157 -25.003 49.896 41.570 1.00 0.02 \ ATOM 173 C GLN D 157 -24.690 49.183 42.880 1.00 0.02 \ ATOM 174 O GLN D 157 -23.816 49.641 43.621 1.00 0.02 \ ATOM 175 CB GLN D 157 -24.136 49.338 40.430 1.00 0.02 \ ATOM 176 CG GLN D 157 -24.718 49.584 39.042 1.00 0.02 \ ATOM 177 CD GLN D 157 -25.680 48.488 38.663 1.00 0.02 \ ATOM 178 OE1 GLN D 157 -25.465 47.292 38.939 1.00 0.02 \ ATOM 179 NE2 GLN D 157 -26.773 48.870 38.033 1.00 0.02 \ """, "e3trzD3_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e3trzD3_csv", state=0, origin=1) cmd.zoom("e3trzD3_csv", animate=-1)