cmd.read_pdbstr("""\ ATOM 1 N PHE B 1 -21.752 1.266 3.607 1.00 -1.00 \ ATOM 2 CA PHE B 1 -20.306 1.279 3.969 1.00 -1.00 \ ATOM 3 C PHE B 1 -20.080 1.111 5.457 1.00 -1.00 \ ATOM 4 O PHE B 1 -20.857 1.528 6.276 1.00 -1.00 \ ATOM 5 CB PHE B 1 -19.635 2.558 3.462 1.00 -1.00 \ ATOM 6 CG PHE B 1 -19.781 2.831 1.986 1.00 -1.00 \ ATOM 7 CD1 PHE B 1 -20.230 4.028 1.552 1.00 -1.00 \ ATOM 8 CD2 PHE B 1 -19.338 1.961 1.058 1.00 -1.00 \ ATOM 9 CE1 PHE B 1 -20.379 4.292 0.186 1.00 -1.00 \ ATOM 10 CE2 PHE B 1 -19.418 2.234 -0.260 1.00 -1.00 \ ATOM 11 CZ PHE B 1 -20.035 3.394 -0.693 1.00 -1.00 \ ATOM 12 N VAL B 2 -18.930 0.687 5.821 1.00 -1.00 \ ATOM 13 CA VAL B 2 -18.580 0.461 7.214 1.00 -1.00 \ ATOM 14 C VAL B 2 -17.749 1.594 7.732 1.00 -1.00 \ ATOM 15 O VAL B 2 -17.095 2.297 6.977 1.00 -1.00 \ ATOM 16 CB VAL B 2 -17.854 -0.874 7.389 1.00 -1.00 \ ATOM 17 CG1 VAL B 2 -18.726 -2.082 7.062 1.00 -1.00 \ ATOM 18 CG2 VAL B 2 -16.516 -0.964 6.618 1.00 -1.00 \ ATOM 19 N ASN B 3 -17.762 1.774 9.049 1.00 -0.48 \ ATOM 20 CA ASN B 3 -16.836 2.701 9.680 1.00 -0.48 \ ATOM 21 C ASN B 3 -15.441 2.180 9.608 1.00 -0.48 \ ATOM 22 O ASN B 3 -15.178 0.996 9.409 1.00 -0.48 \ ATOM 23 CB ASN B 3 -17.290 3.024 11.081 1.00 -0.48 \ ATOM 24 CG ASN B 3 -18.605 3.856 11.078 1.00 -0.48 \ ATOM 25 OD1 ASN B 3 -18.771 4.783 10.266 1.00 -0.48 \ ATOM 26 ND2 ASN B 3 -19.512 3.489 11.941 1.00 -0.48 \ ATOM 27 N GLN B 4 -14.529 3.133 9.840 0.60 0.23 \ ATOM 28 CA GLN B 4 -13.107 3.098 9.514 0.60 0.23 \ ATOM 29 C GLN B 4 -12.228 3.415 10.717 0.60 0.23 \ ATOM 30 O GLN B 4 -12.514 4.342 11.446 0.60 0.23 \ ATOM 31 CB GLN B 4 -12.786 4.074 8.418 0.60 0.23 \ ATOM 32 CG GLN B 4 -13.649 3.937 7.196 0.60 0.23 \ ATOM 33 CD GLN B 4 -13.362 2.775 6.405 0.60 0.23 \ ATOM 34 OE1 GLN B 4 -12.193 2.496 6.146 0.60 0.23 \ ATOM 35 NE2 GLN B 4 -14.389 2.107 5.933 0.60 0.23 \ ATOM 36 N HIS B 5 -11.096 2.675 10.882 1.00 -0.03 \ ATOM 37 CA HIS B 5 -10.014 3.058 11.803 1.00 -0.03 \ ATOM 38 C HIS B 5 -8.803 3.172 10.932 1.00 -0.03 \ ATOM 39 O HIS B 5 -8.320 2.180 10.402 1.00 -0.03 \ ATOM 40 CB HIS B 5 -9.826 1.948 12.859 1.00 -0.03 \ ATOM 41 CG HIS B 5 -8.813 2.264 13.856 1.00 -0.03 \ ATOM 42 ND1 HIS B 5 -8.191 1.270 14.602 1.00 -0.03 \ ATOM 43 CD2 HIS B 5 -8.253 3.437 14.219 1.00 -0.03 \ ATOM 44 CE1 HIS B 5 -7.320 1.849 15.430 1.00 -0.03 \ ATOM 45 NE2 HIS B 5 -7.381 3.160 15.254 1.00 -0.03 \ ATOM 46 N LEU B 6 -8.366 4.424 10.691 1.00 1.17 \ ATOM 47 CA LEU B 6 -7.338 4.744 9.687 1.00 1.17 \ ATOM 48 C LEU B 6 -6.295 5.632 10.265 1.00 1.17 \ ATOM 49 O LEU B 6 -6.634 6.765 10.631 1.00 1.17 \ ATOM 50 CB LEU B 6 -7.999 5.410 8.473 1.00 1.17 \ ATOM 51 CG LEU B 6 -9.049 4.608 7.763 1.00 1.17 \ ATOM 52 CD1 LEU B 6 -9.957 5.537 6.865 1.00 1.17 \ ATOM 53 CD2 LEU B 6 -8.414 3.523 6.941 1.00 1.17 \ ATOM 54 N CYS B 7 -5.079 5.180 10.305 1.00 1.69 \ ATOM 55 CA CYS B 7 -3.904 5.942 10.765 1.00 1.69 \ ATOM 56 C CYS B 7 -2.881 6.106 9.635 1.00 1.69 \ ATOM 57 O CYS B 7 -2.787 5.298 8.721 1.00 1.69 \ ATOM 58 CB CYS B 7 -3.227 5.296 11.989 1.00 1.69 \ ATOM 59 SG CYS B 7 -4.290 5.114 13.424 1.00 1.69 \ ATOM 60 N GLY B 8 -2.082 7.154 9.750 1.00 0.76 \ ATOM 61 CA GLY B 8 -0.983 7.326 8.808 1.00 0.76 \ ATOM 62 C GLY B 8 -1.385 7.271 7.375 1.00 0.76 \ ATOM 63 O GLY B 8 -2.367 7.924 6.930 1.00 0.76 \ ATOM 64 N SER B 9 -0.592 6.585 6.558 1.00 -0.47 \ ATOM 65 CA SER B 9 -0.820 6.534 5.133 1.00 -0.47 \ ATOM 66 C SER B 9 -2.127 5.841 4.803 1.00 -0.47 \ ATOM 67 O SER B 9 -2.618 6.015 3.667 1.00 -0.47 \ ATOM 68 CB SER B 9 0.357 5.896 4.443 1.00 -0.47 \ ATOM 69 OG SER B 9 0.598 4.621 4.919 1.00 -0.47 \ ATOM 70 N HIS B 10 -2.676 5.016 5.679 1.00 -0.23 \ ATOM 71 CA HIS B 10 -3.955 4.373 5.399 1.00 -0.23 \ ATOM 72 C HIS B 10 -5.051 5.374 5.230 1.00 -0.23 \ ATOM 73 O HIS B 10 -5.983 5.179 4.450 1.00 -0.23 \ ATOM 74 CB HIS B 10 -4.285 3.355 6.488 1.00 -0.23 \ ATOM 75 CG HIS B 10 -3.241 2.279 6.585 1.00 -0.23 \ ATOM 76 ND1 HIS B 10 -3.071 1.337 5.582 1.00 -0.23 \ ATOM 77 CD2 HIS B 10 -2.300 2.017 7.521 1.00 -0.23 \ ATOM 78 CE1 HIS B 10 -2.081 0.528 5.953 1.00 -0.23 \ ATOM 79 NE2 HIS B 10 -1.598 0.903 7.131 1.00 -0.23 \ ATOM 80 N LEU B 11 -5.028 6.484 5.950 1.00 1.69 \ ATOM 81 CA LEU B 11 -6.082 7.468 5.727 0.50 1.69 \ ATOM 82 C LEU B 11 -5.931 8.158 4.379 1.00 1.69 \ ATOM 83 O LEU B 11 -6.939 8.434 3.741 1.00 1.69 \ ATOM 84 CB LEU B 11 -6.124 8.514 6.824 0.50 1.69 \ ATOM 85 CG LEU B 11 -7.025 9.723 6.508 0.50 1.69 \ ATOM 86 CD1 LEU B 11 -8.512 9.270 6.348 0.50 1.69 \ ATOM 87 CD2 LEU B 11 -6.869 10.681 7.720 0.50 1.69 \ ATOM 88 N VAL B 12 -4.709 8.420 3.921 1.00 0.76 \ ATOM 89 CA VAL B 12 -4.539 8.975 2.588 1.00 0.76 \ ATOM 90 C VAL B 12 -5.033 8.065 1.493 1.00 0.76 \ ATOM 91 O VAL B 12 -5.614 8.531 0.514 1.00 0.76 \ ATOM 92 CB VAL B 12 -2.985 9.362 2.384 1.00 0.76 \ ATOM 93 CG1 VAL B 12 -2.632 9.554 0.962 1.00 0.76 \ ATOM 94 CG2 VAL B 12 -2.605 10.459 3.358 1.00 0.76 \ ATOM 95 N GLU B 13 -4.850 6.759 1.635 0.50 0.64 \ ATOM 96 CA GLU B 13 -5.380 5.801 0.659 0.50 0.64 \ ATOM 97 C GLU B 13 -6.882 5.855 0.643 0.50 0.64 \ ATOM 98 O GLU B 13 -7.514 5.782 -0.413 0.50 0.64 \ ATOM 99 CB GLU B 13 -4.962 4.362 1.026 0.50 0.64 \ ATOM 100 CG GLU B 13 -3.511 3.955 0.883 0.50 0.64 \ ATOM 101 CD GLU B 13 -3.114 3.760 -0.597 0.50 0.64 \ ATOM 102 OE1 GLU B 13 -1.878 3.831 -0.944 0.50 0.64 \ ATOM 103 OE2 GLU B 13 -4.053 3.584 -1.449 0.50 0.64 \ ATOM 104 N ALA B 14 -7.500 5.966 1.820 1.00 0.02 \ ATOM 105 CA ALA B 14 -8.945 6.049 1.896 1.00 0.02 \ ATOM 106 C ALA B 14 -9.468 7.332 1.222 1.00 0.02 \ ATOM 107 O ALA B 14 -10.455 7.288 0.475 1.00 0.02 \ ATOM 108 CB ALA B 14 -9.411 5.961 3.356 1.00 0.02 \ ATOM 109 N LEU B 15 -8.829 8.456 1.496 1.00 1.69 \ ATOM 110 CA LEU B 15 -9.195 9.697 0.811 1.00 1.69 \ ATOM 111 C LEU B 15 -9.094 9.568 -0.695 1.00 1.69 \ ATOM 112 O LEU B 15 -9.943 10.064 -1.468 1.00 1.69 \ ATOM 113 CB LEU B 15 -8.322 10.872 1.340 1.00 1.69 \ ATOM 114 CG LEU B 15 -8.716 11.401 2.711 1.00 1.69 \ ATOM 115 CD1 LEU B 15 -7.584 12.250 3.253 1.00 1.69 \ ATOM 116 CD2 LEU B 15 -10.012 12.166 2.682 1.00 1.69 \ ATOM 117 N TYR B 16 -8.002 8.945 -1.151 1.00 -0.21 \ ATOM 118 CA TYR B 16 -7.828 8.760 -2.590 1.00 -0.21 \ ATOM 119 C TYR B 16 -9.005 7.997 -3.173 1.00 -0.21 \ ATOM 120 O TYR B 16 -9.525 8.357 -4.241 1.00 -0.21 \ ATOM 121 CB TYR B 16 -6.485 8.078 -2.851 1.00 -0.21 \ ATOM 122 CG TYR B 16 -6.285 7.750 -4.296 1.00 -0.21 \ ATOM 123 CD1 TYR B 16 -6.540 6.497 -4.765 1.00 -0.21 \ ATOM 124 CD2 TYR B 16 -5.876 8.709 -5.194 1.00 -0.21 \ ATOM 125 CE1 TYR B 16 -6.419 6.186 -6.091 1.00 -0.21 \ ATOM 126 CE2 TYR B 16 -5.792 8.432 -6.571 1.00 -0.21 \ ATOM 127 CZ TYR B 16 -6.078 7.192 -6.966 1.00 -0.21 \ ATOM 128 OH TYR B 16 -5.951 6.946 -8.357 1.00 -0.21 \ ATOM 129 N LEU B 17 -9.392 6.884 -2.541 1.00 -0.24 \ ATOM 130 CA LEU B 17 -10.497 6.103 -3.023 1.00 -0.24 \ ATOM 131 C LEU B 17 -11.832 6.852 -2.975 1.00 -0.24 \ ATOM 132 O LEU B 17 -12.623 6.722 -3.916 1.00 -0.24 \ ATOM 133 CB LEU B 17 -10.540 4.823 -2.236 1.00 -0.24 \ ATOM 134 CG LEU B 17 -9.377 3.864 -2.572 1.00 -0.24 \ ATOM 135 CD1 LEU B 17 -9.361 2.694 -1.572 1.00 -0.24 \ ATOM 136 CD2 LEU B 17 -9.493 3.358 -4.012 1.00 -0.24 \ ATOM 137 N VAL B 18 -12.095 7.497 -1.892 1.00 0.30 \ ATOM 138 CA VAL B 18 -13.369 8.188 -1.769 1.00 0.30 \ ATOM 139 C VAL B 18 -13.481 9.294 -2.808 1.00 0.30 \ ATOM 140 O VAL B 18 -14.532 9.518 -3.390 1.00 0.30 \ ATOM 141 CB VAL B 18 -13.556 8.726 -0.338 1.00 0.30 \ ATOM 142 CG1 VAL B 18 -14.712 9.695 -0.245 1.00 0.30 \ ATOM 143 CG2 VAL B 18 -13.767 7.559 0.633 1.00 0.30 \ ATOM 144 N CYS B 19 -12.406 10.056 -2.987 1.00 1.69 \ ATOM 145 CA CYS B 19 -12.485 11.265 -3.763 1.00 1.69 \ ATOM 146 C CYS B 19 -12.206 11.138 -5.221 1.00 1.69 \ ATOM 147 O CYS B 19 -12.761 11.897 -6.055 1.00 1.69 \ ATOM 148 CB CYS B 19 -11.558 12.341 -3.140 1.00 1.69 \ ATOM 149 SG CYS B 19 -11.965 12.771 -1.449 1.00 1.69 \ ATOM 150 N GLY B 20 -11.384 10.169 -5.564 1.00 -0.12 \ ATOM 151 CA GLY B 20 -11.087 9.923 -6.972 1.00 -0.12 \ ATOM 152 C GLY B 20 -10.561 11.181 -7.657 1.00 -0.12 \ ATOM 153 O GLY B 20 -9.753 11.960 -7.105 1.00 -0.12 \ ATOM 154 N GLU B 21 -11.115 11.453 -8.838 1.00 0.18 \ ATOM 155 CA GLU B 21 -10.663 12.567 -9.644 1.00 0.18 \ ATOM 156 C GLU B 21 -11.006 13.926 -9.051 1.00 0.18 \ ATOM 157 O GLU B 21 -10.447 14.926 -9.529 1.00 0.18 \ ATOM 158 CB GLU B 21 -11.147 12.428 -11.062 1.00 0.18 \ ATOM 159 CG GLU B 21 -12.629 12.613 -11.157 1.00 0.18 \ ATOM 160 CD GLU B 21 -13.092 12.777 -12.600 1.00 0.18 \ ATOM 161 OE1 GLU B 21 -12.254 12.597 -13.541 1.00 0.18 \ ATOM 162 OE2 GLU B 21 -14.299 13.103 -12.790 1.00 0.18 \ ATOM 163 N ARG B 22 -11.859 14.004 -8.036 1.00 -0.58 \ ATOM 164 CA ARG B 22 -12.129 15.236 -7.371 1.00 -0.58 \ ATOM 165 C ARG B 22 -10.889 15.705 -6.676 1.00 -0.58 \ ATOM 166 O ARG B 22 -10.803 16.909 -6.435 1.00 -0.58 \ ATOM 167 CB ARG B 22 -13.253 15.124 -6.319 1.00 -0.58 \ ATOM 168 CG ARG B 22 -14.639 14.757 -6.867 1.00 -0.58 \ ATOM 169 CD ARG B 22 -15.652 14.719 -5.731 1.00 -0.58 \ ATOM 170 NE ARG B 22 -15.568 13.417 -5.110 1.00 -0.58 \ ATOM 171 CZ ARG B 22 -16.448 13.029 -4.200 1.00 -0.58 \ ATOM 172 NH1 ARG B 22 -17.400 13.883 -3.757 1.00 -0.58 \ ATOM 173 NH2 ARG B 22 -16.378 11.811 -3.748 1.00 -0.58 \ ATOM 174 N GLY B 23 -9.969 14.795 -6.298 1.00 1.69 \ ATOM 175 CA GLY B 23 -8.878 15.189 -5.426 1.00 1.69 \ ATOM 176 C GLY B 23 -9.302 15.471 -4.031 1.00 1.69 \ ATOM 177 O GLY B 23 -10.492 15.360 -3.696 1.00 1.69 \ ATOM 178 N PHE B 24 -8.354 15.783 -3.169 1.00 1.16 \ ATOM 179 CA PHE B 24 -8.612 15.992 -1.779 1.00 1.16 \ ATOM 180 C PHE B 24 -7.510 16.778 -1.137 1.00 1.16 \ ATOM 181 O PHE B 24 -6.415 16.998 -1.668 1.00 1.16 \ ATOM 182 CB PHE B 24 -8.779 14.639 -1.037 1.00 1.16 \ ATOM 183 CG PHE B 24 -7.568 13.775 -1.027 1.00 1.16 \ ATOM 184 CD1 PHE B 24 -7.363 12.823 -2.014 1.00 1.16 \ ATOM 185 CD2 PHE B 24 -6.572 13.910 -0.062 1.00 1.16 \ ATOM 186 CE1 PHE B 24 -6.228 12.017 -2.052 1.00 1.16 \ ATOM 187 CE2 PHE B 24 -5.458 13.068 -0.040 1.00 1.16 \ ATOM 188 CZ PHE B 24 -5.324 12.114 -1.077 1.00 1.16 \ ATOM 189 N PHE B 25 -7.817 17.225 0.111 1.00 0.51 \ ATOM 190 CA PHE B 25 -6.863 17.872 0.978 1.00 0.51 \ ATOM 191 C PHE B 25 -6.627 17.004 2.214 1.00 0.51 \ ATOM 192 O PHE B 25 -7.577 16.519 2.834 1.00 0.51 \ ATOM 193 CB PHE B 25 -7.389 19.273 1.463 1.00 0.51 \ ATOM 194 CG PHE B 25 -7.798 20.126 0.401 1.00 0.51 \ ATOM 195 CD1 PHE B 25 -6.848 20.940 -0.146 1.00 0.51 \ ATOM 196 CD2 PHE B 25 -9.119 20.065 -0.210 1.00 0.51 \ ATOM 197 CE1 PHE B 25 -7.112 21.723 -1.334 1.00 0.51 \ ATOM 198 CE2 PHE B 25 -9.408 20.828 -1.332 1.00 0.51 \ ATOM 199 CZ PHE B 25 -8.394 21.651 -1.883 1.00 0.51 \ ATOM 200 N TYR B 26 -5.360 16.778 2.505 1.00 -0.23 \ ATOM 201 CA TYR B 26 -4.896 16.076 3.685 1.00 -0.23 \ ATOM 202 C TYR B 26 -4.404 17.099 4.660 1.00 -0.23 \ ATOM 203 O TYR B 26 -3.376 17.736 4.413 1.00 -0.23 \ ATOM 204 CB TYR B 26 -3.814 15.083 3.317 1.00 -0.23 \ ATOM 205 CG TYR B 26 -3.248 14.365 4.499 1.00 -0.23 \ ATOM 206 CD1 TYR B 26 -4.031 13.403 5.223 1.00 -0.23 \ ATOM 207 CD2 TYR B 26 -1.963 14.552 4.906 1.00 -0.23 \ ATOM 208 CE1 TYR B 26 -3.520 12.731 6.307 1.00 -0.23 \ ATOM 209 CE2 TYR B 26 -1.450 13.893 5.993 1.00 -0.23 \ ATOM 210 CZ TYR B 26 -2.217 12.997 6.715 1.00 -0.23 \ ATOM 211 OH TYR B 26 -1.664 12.360 7.852 1.00 -0.23 \ ATOM 212 N THR B 27 -5.099 17.260 5.811 1.00 -0.98 \ ATOM 213 CA THR B 27 -4.853 18.392 6.699 0.50 -0.98 \ ATOM 214 C THR B 27 -4.702 17.937 8.178 1.00 -0.98 \ ATOM 215 O THR B 27 -5.659 18.097 8.922 1.00 -0.98 \ ATOM 216 CB THR B 27 -5.995 19.429 6.493 0.50 -0.98 \ ATOM 217 OG1 THR B 27 -7.310 18.857 6.680 0.50 -0.98 \ ATOM 218 CG2 THR B 27 -5.831 19.945 5.087 0.50 -0.98 \ ATOM 219 N PRO B 28 -3.589 17.334 8.543 1.00 -0.78 \ ATOM 220 CA PRO B 28 -3.365 16.948 9.967 1.00 -0.78 \ ATOM 221 C PRO B 28 -3.288 18.151 10.847 1.00 -0.78 \ ATOM 222 O PRO B 28 -2.836 19.188 10.433 1.00 -0.78 \ ATOM 223 CB PRO B 28 -2.030 16.154 9.936 1.00 -0.78 \ ATOM 224 CG PRO B 28 -1.531 16.397 8.668 1.00 -0.78 \ ATOM 225 CD PRO B 28 -2.446 16.944 7.712 1.00 -0.78 \ ATOM 226 N LYS B 29 -3.558 17.920 12.125 1.00 -0.90 \ ATOM 227 CA LYS B 29 -3.227 18.882 13.159 1.00 -0.90 \ ATOM 228 C LYS B 29 -1.733 18.971 13.336 1.00 -0.90 \ ATOM 229 O LYS B 29 -0.951 17.982 13.229 1.00 -0.90 \ ATOM 230 CB LYS B 29 -3.941 18.449 14.492 1.00 -0.90 \ ATOM 231 CG LYS B 29 -3.918 19.301 15.630 1.00 -0.90 \ ATOM 232 CD LYS B 29 -4.940 18.775 16.631 1.00 -0.90 \ ATOM 233 CE LYS B 29 -4.631 19.316 17.948 1.00 -0.90 \ ATOM 234 NZ LYS B 29 -5.336 18.413 18.732 1.00 -0.90 \ ATOM 235 N THR B 30 -1.265 20.176 13.591 1.00 -1.45 \ ATOM 236 CA THR B 30 0.155 20.391 13.863 1.00 -1.45 \ ATOM 237 C THR B 30 0.336 20.831 15.316 1.00 -1.45 \ ATOM 238 O THR B 30 1.462 20.800 15.879 1.00 -1.45 \ ATOM 239 CB THR B 30 0.781 21.451 12.902 1.00 -1.45 \ ATOM 240 OG1 THR B 30 0.062 22.692 13.060 1.00 -1.45 \ ATOM 241 CG2 THR B 30 0.775 20.996 11.456 1.00 -1.45 \ ATOM 242 OXT THR B 30 -0.656 21.226 15.981 1.00 -1.45 \ """, "e3tt8B1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e3tt8B1_csv", state=0, origin=1) cmd.zoom("e3tt8B1_csv", animate=-1)