cmd.read_pdbstr("""\ ATOM 1 N MET n 1 -48.173 -4.318 78.363 1.00 -1.00 \ ATOM 2 CA MET n 1 -47.429 -4.882 79.483 1.00 -1.00 \ ATOM 3 C MET n 1 -47.925 -4.324 80.821 1.00 -1.00 \ ATOM 4 O MET n 1 -48.398 -3.175 80.886 1.00 -1.00 \ ATOM 5 CB MET n 1 -45.953 -4.574 79.318 1.00 -1.00 \ ATOM 6 CG MET n 1 -45.564 -3.171 79.651 1.00 -1.00 \ ATOM 7 SD MET n 1 -43.806 -2.875 79.278 1.00 -1.00 \ ATOM 8 CE MET n 1 -43.021 -4.059 80.394 1.00 -1.00 \ ATOM 9 N ARG n 2 -47.816 -5.147 81.872 1.00 0.39 \ ATOM 10 CA ARG n 2 -48.178 -4.759 83.242 1.00 0.39 \ ATOM 11 C ARG n 2 -47.722 -3.340 83.509 1.00 0.39 \ ATOM 12 O ARG n 2 -46.662 -2.938 83.063 1.00 0.39 \ ATOM 13 CB ARG n 2 -47.572 -5.730 84.269 1.00 0.39 \ ATOM 14 CG ARG n 2 -47.536 -5.207 85.697 1.00 0.39 \ ATOM 15 CD ARG n 2 -48.348 -6.034 86.674 1.00 0.39 \ ATOM 16 NE ARG n 2 -47.598 -7.044 87.427 1.00 0.39 \ ATOM 17 CZ ARG n 2 -47.534 -7.120 88.769 1.00 0.39 \ ATOM 18 NH1 ARG n 2 -48.138 -6.221 89.548 1.00 0.39 \ ATOM 19 NH2 ARG n 2 -46.851 -8.108 89.352 1.00 0.39 \ ATOM 20 N ALA n 3 -48.536 -2.555 84.189 1.00 0.39 \ ATOM 21 CA ALA n 3 -48.283 -1.129 84.256 1.00 0.39 \ ATOM 22 C ALA n 3 -47.094 -0.893 85.161 1.00 0.39 \ ATOM 23 O ALA n 3 -46.262 -0.006 84.910 1.00 0.39 \ ATOM 24 CB ALA n 3 -49.481 -0.426 84.775 1.00 0.39 \ ATOM 25 N LYS n 4 -47.026 -1.707 86.214 1.00 0.39 \ ATOM 26 CA LYS n 4 -45.936 -1.678 87.182 1.00 0.39 \ ATOM 27 C LYS n 4 -44.595 -1.706 86.467 1.00 0.39 \ ATOM 28 O LYS n 4 -43.707 -0.924 86.758 1.00 0.39 \ ATOM 29 CB LYS n 4 -46.066 -2.885 88.114 1.00 0.39 \ ATOM 30 CG LYS n 4 -44.822 -3.224 88.900 1.00 0.39 \ ATOM 31 CD LYS n 4 -44.963 -2.923 90.368 1.00 0.39 \ ATOM 32 CE LYS n 4 -45.548 -4.087 91.104 1.00 0.39 \ ATOM 33 NZ LYS n 4 -45.613 -3.807 92.562 1.00 0.39 \ ATOM 34 N TRP n 5 -44.498 -2.609 85.502 1.00 0.39 \ ATOM 35 CA TRP n 5 -43.290 -2.878 84.755 1.00 0.39 \ ATOM 36 C TRP n 5 -43.053 -1.856 83.646 1.00 0.39 \ ATOM 37 O TRP n 5 -41.905 -1.611 83.243 1.00 0.39 \ ATOM 38 CB TRP n 5 -43.384 -4.258 84.104 1.00 0.39 \ ATOM 39 CG TRP n 5 -43.600 -5.466 84.984 1.00 0.39 \ ATOM 40 CD1 TRP n 5 -44.200 -6.612 84.597 1.00 0.39 \ ATOM 41 CD2 TRP n 5 -43.183 -5.677 86.354 1.00 0.39 \ ATOM 42 NE1 TRP n 5 -44.205 -7.524 85.623 1.00 0.39 \ ATOM 43 CE2 TRP n 5 -43.587 -6.977 86.714 1.00 0.39 \ ATOM 44 CE3 TRP n 5 -42.518 -4.900 87.305 1.00 0.39 \ ATOM 45 CZ2 TRP n 5 -43.358 -7.519 87.992 1.00 0.39 \ ATOM 46 CZ3 TRP n 5 -42.299 -5.440 88.582 1.00 0.39 \ ATOM 47 CH2 TRP n 5 -42.731 -6.733 88.909 1.00 0.39 \ ATOM 48 N ARG n 6 -44.120 -1.284 83.112 1.00 0.39 \ ATOM 49 CA ARG n 6 -43.936 -0.268 82.099 1.00 0.39 \ ATOM 50 C ARG n 6 -43.482 0.999 82.806 1.00 0.39 \ ATOM 51 O ARG n 6 -42.831 1.856 82.242 1.00 0.39 \ ATOM 52 CB ARG n 6 -45.214 -0.066 81.302 1.00 0.39 \ ATOM 53 CG ARG n 6 -45.375 1.309 80.724 1.00 0.39 \ ATOM 54 CD ARG n 6 -45.397 1.351 79.194 1.00 0.39 \ ATOM 55 NE ARG n 6 -46.172 2.527 78.774 1.00 0.39 \ ATOM 56 CZ ARG n 6 -45.690 3.708 78.353 1.00 0.39 \ ATOM 57 NH1 ARG n 6 -44.365 3.945 78.214 1.00 0.39 \ ATOM 58 NH2 ARG n 6 -46.575 4.666 78.044 1.00 0.39 \ ATOM 59 N LYS n 7 -43.794 1.083 84.081 1.00 0.39 \ ATOM 60 CA LYS n 7 -43.335 2.173 84.889 1.00 0.39 \ ATOM 61 C LYS n 7 -41.859 1.949 85.264 1.00 0.39 \ ATOM 62 O LYS n 7 -41.094 2.901 85.429 1.00 0.39 \ ATOM 63 CB LYS n 7 -44.187 2.231 86.145 1.00 0.39 \ ATOM 64 CG LYS n 7 -43.898 3.413 87.046 1.00 0.39 \ ATOM 65 CD LYS n 7 -44.342 3.111 88.445 1.00 0.39 \ ATOM 66 CE LYS n 7 -44.064 4.289 89.323 1.00 0.39 \ ATOM 67 NZ LYS n 7 -45.218 4.530 90.228 1.00 0.39 \ ATOM 68 N LYS n 8 -41.452 0.692 85.407 1.00 0.39 \ ATOM 69 CA LYS n 8 -40.052 0.409 85.638 1.00 0.39 \ ATOM 70 C LYS n 8 -39.254 0.624 84.357 1.00 0.39 \ ATOM 71 O LYS n 8 -38.090 1.042 84.414 1.00 0.39 \ ATOM 72 CB LYS n 8 -39.861 -1.011 86.139 1.00 0.39 \ ATOM 73 CG LYS n 8 -38.397 -1.386 86.373 1.00 0.39 \ ATOM 74 CD LYS n 8 -38.200 -2.898 86.357 1.00 0.39 \ ATOM 75 CE LYS n 8 -38.478 -3.490 87.730 1.00 0.39 \ ATOM 76 NZ LYS n 8 -37.336 -3.285 88.706 1.00 0.39 \ ATOM 77 N ARG n 9 -39.884 0.317 83.215 1.00 0.39 \ ATOM 78 CA ARG n 9 -39.260 0.499 81.908 1.00 0.39 \ ATOM 79 C ARG n 9 -38.863 1.939 81.826 1.00 0.39 \ ATOM 80 O ARG n 9 -37.712 2.272 81.424 1.00 0.39 \ ATOM 81 CB ARG n 9 -40.215 0.194 80.753 1.00 0.39 \ ATOM 82 CG ARG n 9 -39.518 -0.284 79.492 1.00 0.39 \ ATOM 83 CD ARG n 9 -40.205 0.138 78.176 1.00 0.39 \ ATOM 84 NE ARG n 9 -40.864 -0.874 77.299 1.00 0.39 \ ATOM 85 CZ ARG n 9 -40.766 -2.209 77.349 1.00 0.39 \ ATOM 86 NH1 ARG n 9 -39.998 -2.852 78.227 1.00 0.39 \ ATOM 87 NH2 ARG n 9 -41.435 -2.927 76.474 1.00 0.39 \ ATOM 88 N THR n 10 -39.789 2.815 82.230 1.00 -2.46 \ ATOM 89 CA THR n 10 -39.472 4.211 82.029 1.00 -2.46 \ ATOM 90 C THR n 10 -38.541 4.801 83.091 1.00 -2.46 \ ATOM 91 O THR n 10 -37.724 5.677 82.768 1.00 -2.46 \ ATOM 92 CB THR n 10 -40.673 5.087 81.650 1.00 -2.46 \ ATOM 93 OG1 THR n 10 -41.081 5.878 82.761 1.00 -2.46 \ ATOM 94 CG2 THR n 10 -41.811 4.241 81.096 1.00 -2.46 \ ATOM 95 N ARG n 11 -38.617 4.290 84.322 1.00 0.39 \ ATOM 96 CA ARG n 11 -37.647 4.696 85.347 1.00 0.39 \ ATOM 97 C ARG n 11 -36.227 4.481 84.803 1.00 0.39 \ ATOM 98 O ARG n 11 -35.341 5.338 84.940 1.00 0.39 \ ATOM 99 CB ARG n 11 -37.848 3.923 86.662 1.00 0.39 \ ATOM 100 CG ARG n 11 -38.382 4.736 87.823 1.00 0.39 \ ATOM 101 CD ARG n 11 -39.790 5.205 87.557 1.00 0.39 \ ATOM 102 NE ARG n 11 -40.404 5.856 88.715 1.00 0.39 \ ATOM 103 CZ ARG n 11 -40.811 5.236 89.835 1.00 0.39 \ ATOM 104 NH1 ARG n 11 -40.651 3.921 89.992 1.00 0.39 \ ATOM 105 NH2 ARG n 11 -41.370 5.943 90.821 1.00 0.39 \ ATOM 106 N ARG n 12 -36.055 3.338 84.143 1.00 0.39 \ ATOM 107 CA ARG n 12 -34.776 2.933 83.587 1.00 0.39 \ ATOM 108 C ARG n 12 -34.443 3.815 82.403 1.00 0.39 \ ATOM 109 O ARG n 12 -33.317 4.301 82.262 1.00 0.39 \ ATOM 110 CB ARG n 12 -34.851 1.493 83.089 1.00 0.39 \ ATOM 111 CG ARG n 12 -34.834 0.413 84.136 1.00 0.39 \ ATOM 112 CD ARG n 12 -34.989 -0.823 83.393 1.00 0.39 \ ATOM 113 NE ARG n 12 -35.079 -2.014 84.205 1.00 0.39 \ ATOM 114 CZ ARG n 12 -35.571 -3.146 83.723 1.00 0.39 \ ATOM 115 NH1 ARG n 12 -36.011 -3.177 82.466 1.00 0.39 \ ATOM 116 NH2 ARG n 12 -35.646 -4.218 84.490 1.00 0.39 \ ATOM 117 N LEU n 13 -35.431 3.997 81.540 1.00 0.39 \ ATOM 118 CA LEU n 13 -35.233 4.813 80.365 1.00 0.39 \ ATOM 119 C LEU n 13 -34.763 6.222 80.757 1.00 0.39 \ ATOM 120 O LEU n 13 -33.980 6.847 80.058 1.00 0.39 \ ATOM 121 CB LEU n 13 -36.549 4.863 79.584 1.00 0.39 \ ATOM 122 CG LEU n 13 -36.595 5.509 78.201 1.00 0.39 \ ATOM 123 CD1 LEU n 13 -37.013 6.928 78.411 1.00 0.39 \ ATOM 124 CD2 LEU n 13 -35.257 5.437 77.483 1.00 0.39 \ ATOM 125 N LYS n 14 -35.258 6.718 81.877 1.00 0.39 \ ATOM 126 CA LYS n 14 -34.990 8.092 82.239 1.00 0.39 \ ATOM 127 C LYS n 14 -33.578 8.158 82.745 1.00 0.39 \ ATOM 128 O LYS n 14 -32.829 9.039 82.373 1.00 0.39 \ ATOM 129 CB LYS n 14 -35.964 8.580 83.317 1.00 0.39 \ ATOM 130 CG LYS n 14 -37.122 9.385 82.775 1.00 0.39 \ ATOM 131 CD LYS n 14 -38.068 9.843 83.878 1.00 0.39 \ ATOM 132 CE LYS n 14 -38.479 8.691 84.767 1.00 0.39 \ ATOM 133 NZ LYS n 14 -39.860 8.844 85.347 1.00 0.39 \ ATOM 134 N ARG n 15 -33.227 7.199 83.590 1.00 0.39 \ ATOM 135 CA ARG n 15 -31.920 7.136 84.203 1.00 0.39 \ ATOM 136 C ARG n 15 -30.801 7.083 83.147 1.00 0.39 \ ATOM 137 O ARG n 15 -29.726 7.620 83.359 1.00 0.39 \ ATOM 138 CB ARG n 15 -31.898 5.944 85.142 1.00 0.39 \ ATOM 139 CG ARG n 15 -30.578 5.655 85.798 1.00 0.39 \ ATOM 140 CD ARG n 15 -30.794 4.758 86.997 1.00 0.39 \ ATOM 141 NE ARG n 15 -31.693 3.683 86.606 1.00 0.39 \ ATOM 142 CZ ARG n 15 -32.104 2.685 87.387 1.00 0.39 \ ATOM 143 NH1 ARG n 15 -31.699 2.616 88.668 1.00 0.39 \ ATOM 144 NH2 ARG n 15 -32.925 1.755 86.871 1.00 0.39 \ ATOM 145 N LYS n 16 -31.076 6.479 81.994 1.00 0.39 \ ATOM 146 CA LYS n 16 -30.145 6.473 80.870 1.00 0.39 \ ATOM 147 C LYS n 16 -30.021 7.832 80.192 1.00 0.39 \ ATOM 148 O LYS n 16 -28.921 8.280 79.904 1.00 0.39 \ ATOM 149 CB LYS n 16 -30.555 5.438 79.830 1.00 0.39 \ ATOM 150 CG LYS n 16 -29.618 4.268 79.789 1.00 0.39 \ ATOM 151 CD LYS n 16 -29.741 3.455 78.512 1.00 0.39 \ ATOM 152 CE LYS n 16 -28.335 3.002 78.014 1.00 0.39 \ ATOM 153 NZ LYS n 16 -27.409 4.160 77.623 1.00 0.39 \ ATOM 154 N ARG n 17 -31.143 8.488 79.921 1.00 0.39 \ ATOM 155 CA ARG n 17 -31.087 9.819 79.320 1.00 0.39 \ ATOM 156 C ARG n 17 -30.369 10.778 80.262 1.00 0.39 \ ATOM 157 O ARG n 17 -29.724 11.700 79.814 1.00 0.39 \ ATOM 158 CB ARG n 17 -32.483 10.324 78.854 1.00 0.39 \ ATOM 159 CG ARG n 17 -33.308 9.209 78.124 1.00 0.39 \ ATOM 160 CD ARG n 17 -34.357 9.632 77.051 1.00 0.39 \ ATOM 161 NE ARG n 17 -35.664 9.910 77.645 1.00 0.39 \ ATOM 162 CZ ARG n 17 -36.854 9.757 77.052 1.00 0.39 \ ATOM 163 NH1 ARG n 17 -36.968 9.273 75.804 1.00 0.39 \ ATOM 164 NH2 ARG n 17 -37.952 10.064 77.756 1.00 0.39 \ ATOM 165 N ARG n 18 -30.451 10.525 81.560 1.00 0.39 \ ATOM 166 CA ARG n 18 -29.698 11.306 82.516 1.00 0.39 \ ATOM 167 C ARG n 18 -28.216 11.103 82.251 1.00 0.39 \ ATOM 168 O ARG n 18 -27.453 12.075 82.117 1.00 0.39 \ ATOM 169 CB ARG n 18 -30.027 10.896 83.947 1.00 0.39 \ ATOM 170 CG ARG n 18 -30.777 11.949 84.755 1.00 0.39 \ ATOM 171 CD ARG n 18 -30.991 11.522 86.219 1.00 0.39 \ ATOM 172 NE ARG n 18 -32.243 10.776 86.436 1.00 0.39 \ ATOM 173 CZ ARG n 18 -32.443 9.901 87.429 1.00 0.39 \ ATOM 174 NH1 ARG n 18 -31.471 9.650 88.304 1.00 0.39 \ ATOM 175 NH2 ARG n 18 -33.608 9.259 87.543 1.00 0.39 \ ATOM 176 N LYS n 19 -27.808 9.839 82.170 1.00 0.39 \ ATOM 177 CA LYS n 19 -26.409 9.512 81.952 1.00 0.39 \ ATOM 178 C LYS n 19 -25.893 10.195 80.684 1.00 0.39 \ ATOM 179 O LYS n 19 -25.000 11.065 80.730 1.00 0.39 \ ATOM 180 CB LYS n 19 -26.210 8.003 81.886 1.00 0.39 \ ATOM 181 CG LYS n 19 -25.303 7.406 82.963 1.00 0.39 \ ATOM 182 CD LYS n 19 -26.092 6.975 84.230 1.00 0.39 \ ATOM 183 CE LYS n 19 -25.158 6.572 85.430 1.00 0.39 \ ATOM 184 NZ LYS n 19 -25.103 5.075 85.813 1.00 0.39 \ ATOM 185 N VAL n 20 -26.472 9.823 79.554 1.00 -2.46 \ ATOM 186 CA VAL n 20 -26.041 10.398 78.279 1.00 -2.46 \ ATOM 187 C VAL n 20 -25.949 11.910 78.321 1.00 -2.46 \ ATOM 188 O VAL n 20 -25.069 12.503 77.724 1.00 -2.46 \ ATOM 189 CB VAL n 20 -27.019 10.076 77.168 1.00 -2.46 \ ATOM 190 CG1 VAL n 20 -26.329 10.168 75.822 1.00 -2.46 \ ATOM 191 CG2 VAL n 20 -27.558 8.714 77.382 1.00 -2.46 \ ATOM 192 N ARG n 21 -26.876 12.537 79.021 1.00 0.39 \ ATOM 193 CA ARG n 21 -26.915 13.977 78.989 1.00 0.39 \ ATOM 194 C ARG n 21 -25.736 14.577 79.724 1.00 0.39 \ ATOM 195 O ARG n 21 -25.175 15.598 79.282 1.00 0.39 \ ATOM 196 CB ARG n 21 -28.234 14.527 79.515 1.00 0.39 \ ATOM 197 CG ARG n 21 -28.874 15.452 78.527 1.00 0.39 \ ATOM 198 CD ARG n 21 -30.042 16.178 79.137 1.00 0.39 \ ATOM 199 NE ARG n 21 -29.935 17.620 78.937 1.00 0.39 \ ATOM 200 CZ ARG n 21 -30.702 18.527 79.524 1.00 0.39 \ ATOM 201 NH1 ARG n 21 -30.488 19.810 79.270 1.00 0.39 \ ATOM 202 NH2 ARG n 21 -31.672 18.154 80.344 1.00 0.39 \ ATOM 203 N ALA n 22 -25.350 13.941 80.828 1.00 -2.46 \ ATOM 204 CA ALA n 22 -24.292 14.506 81.663 1.00 -2.46 \ ATOM 205 C ALA n 22 -22.950 14.378 80.939 1.00 -2.46 \ ATOM 206 O ALA n 22 -22.003 15.139 81.186 1.00 -2.46 \ ATOM 207 CB ALA n 22 -24.244 13.835 82.989 1.00 -2.46 \ ATOM 208 N ARG n 23 -22.910 13.432 79.997 1.00 0.39 \ ATOM 209 CA ARG n 23 -21.785 13.249 79.082 1.00 0.39 \ ATOM 210 C ARG n 23 -21.400 14.547 78.415 1.00 0.39 \ ATOM 211 O ARG n 23 -20.327 14.661 77.825 1.00 0.39 \ ATOM 212 CB ARG n 23 -22.193 12.296 77.977 1.00 0.39 \ ATOM 213 CG ARG n 23 -21.433 11.050 77.919 1.00 0.39 \ ATOM 214 CD ARG n 23 -21.890 10.215 76.748 1.00 0.39 \ ATOM 215 NE ARG n 23 -20.979 9.093 76.670 1.00 0.39 \ ATOM 216 CZ ARG n 23 -19.780 9.136 76.077 1.00 0.39 \ ATOM 217 NH1 ARG n 23 -18.999 8.068 76.113 1.00 0.39 \ ATOM 218 NH2 ARG n 23 -19.339 10.225 75.449 1.00 0.39 \ ATOM 219 N SER n 24 -22.280 15.527 78.506 1.00 -1.00 \ ATOM 220 CA SER n 24 -22.195 16.695 77.675 1.00 -1.00 \ ATOM 221 C SER n 24 -22.376 17.995 78.454 1.00 -1.00 \ ATOM 222 O SER n 24 -22.520 19.054 77.855 1.00 -1.00 \ ATOM 223 CB SER n 24 -23.272 16.597 76.599 1.00 -1.00 \ ATOM 224 OG SER n 24 -23.291 17.781 75.820 1.00 -1.00 \ ATOM 225 N LYS n 25 -22.383 17.925 79.781 1.00 -1.00 \ ATOM 226 CA LYS n 25 -22.651 19.105 80.591 1.00 -1.00 \ ATOM 227 C LYS n 25 -21.685 20.243 80.330 1.00 -1.00 \ ATOM 228 O LYS n 25 -20.719 20.084 79.596 1.00 -1.00 \ ATOM 229 CB LYS n 25 -22.597 18.753 82.058 1.00 -1.00 \ ATOM 230 CG LYS n 25 -23.762 17.951 82.515 1.00 -1.00 \ ATOM 231 CD LYS n 25 -23.651 17.722 84.018 1.00 -1.00 \ ATOM 232 CE LYS n 25 -22.229 17.299 84.407 1.00 -1.00 \ ATOM 233 NZ LYS n 25 -22.183 16.710 85.774 1.00 -1.00 \ """, "e3u5en1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e3u5en1_csv", state=0, origin=1) cmd.zoom("e3u5en1_csv", animate=-1)