cmd.read_pdbstr("""\ ATOM 1 N MET n 1 226.332 0.916 236.824 1.00 -1.00 \ ATOM 2 CA MET n 1 225.868 0.320 235.578 1.00 -1.00 \ ATOM 3 C MET n 1 226.677 0.837 234.373 1.00 -1.00 \ ATOM 4 O MET n 1 227.199 1.963 234.406 1.00 -1.00 \ ATOM 5 CB MET n 1 224.375 0.568 235.405 1.00 -1.00 \ ATOM 6 CG MET n 1 223.913 2.015 235.216 1.00 -1.00 \ ATOM 7 SD MET n 1 222.067 2.138 235.077 1.00 -1.00 \ ATOM 8 CE MET n 1 221.779 1.315 233.527 1.00 -1.00 \ ATOM 9 N ARG n 2 226.799 0.000 233.335 1.00 0.39 \ ATOM 10 CA ARG n 2 227.509 0.385 232.109 1.00 0.39 \ ATOM 11 C ARG n 2 227.008 1.755 231.694 1.00 0.39 \ ATOM 12 O ARG n 2 225.818 2.049 231.822 1.00 0.39 \ ATOM 13 CB ARG n 2 227.354 -0.644 230.962 1.00 0.39 \ ATOM 14 CG ARG n 2 227.555 -0.018 229.564 1.00 0.39 \ ATOM 15 CD ARG n 2 228.458 -0.762 228.575 1.00 0.39 \ ATOM 16 NE ARG n 2 227.857 -1.935 227.931 1.00 0.39 \ ATOM 17 CZ ARG n 2 227.925 -2.244 226.631 1.00 0.39 \ ATOM 18 NH1 ARG n 2 228.530 -1.467 225.750 1.00 0.39 \ ATOM 19 NH2 ARG n 2 227.344 -3.350 226.197 1.00 0.39 \ ATOM 20 N ALA n 3 227.923 2.608 231.247 1.00 0.39 \ ATOM 21 CA ALA n 3 227.599 3.995 230.934 1.00 0.39 \ ATOM 22 C ALA n 3 226.505 4.016 229.893 1.00 0.39 \ ATOM 23 O ALA n 3 225.474 4.661 230.071 1.00 0.39 \ ATOM 24 CB ALA n 3 228.814 4.715 230.424 1.00 0.39 \ ATOM 25 N LYS n 4 226.728 3.280 228.812 1.00 0.39 \ ATOM 26 CA LYS n 4 225.815 3.306 227.676 1.00 0.39 \ ATOM 27 C LYS n 4 224.381 3.134 228.116 1.00 0.39 \ ATOM 28 O LYS n 4 223.478 3.731 227.544 1.00 0.39 \ ATOM 29 CB LYS n 4 226.257 2.283 226.611 1.00 0.39 \ ATOM 30 CG LYS n 4 225.283 2.129 225.493 1.00 0.39 \ ATOM 31 CD LYS n 4 225.652 0.992 224.630 1.00 0.39 \ ATOM 32 CE LYS n 4 226.465 1.518 223.510 1.00 0.39 \ ATOM 33 NZ LYS n 4 226.514 0.535 222.441 1.00 0.39 \ ATOM 34 N TRP n 5 224.207 2.362 229.182 1.00 0.39 \ ATOM 35 CA TRP n 5 222.902 2.012 229.671 1.00 0.39 \ ATOM 36 C TRP n 5 222.364 3.060 230.627 1.00 0.39 \ ATOM 37 O TRP n 5 221.156 3.318 230.634 1.00 0.39 \ ATOM 38 CB TRP n 5 222.947 0.673 230.375 1.00 0.39 \ ATOM 39 CG TRP n 5 223.408 -0.499 229.586 1.00 0.39 \ ATOM 40 CD1 TRP n 5 224.041 -1.583 230.093 1.00 0.39 \ ATOM 41 CD2 TRP n 5 223.287 -0.734 228.171 1.00 0.39 \ ATOM 42 NE1 TRP n 5 224.317 -2.483 229.099 1.00 0.39 \ ATOM 43 CE2 TRP n 5 223.842 -1.996 227.912 1.00 0.39 \ ATOM 44 CE3 TRP n 5 222.753 -0.010 227.099 1.00 0.39 \ ATOM 45 CZ2 TRP n 5 223.884 -2.555 226.627 1.00 0.39 \ ATOM 46 CZ3 TRP n 5 222.788 -0.583 225.821 1.00 0.39 \ ATOM 47 CH2 TRP n 5 223.362 -1.835 225.603 1.00 0.39 \ ATOM 48 N ARG n 6 223.242 3.647 231.438 1.00 0.39 \ ATOM 49 CA ARG n 6 222.885 4.832 232.204 1.00 0.39 \ ATOM 50 C ARG n 6 222.275 5.824 231.244 1.00 0.39 \ ATOM 51 O ARG n 6 221.171 6.315 231.437 1.00 0.39 \ ATOM 52 CB ARG n 6 224.123 5.456 232.822 1.00 0.39 \ ATOM 53 CG ARG n 6 224.071 5.676 234.318 1.00 0.39 \ ATOM 54 CD ARG n 6 223.575 7.066 234.714 1.00 0.39 \ ATOM 55 NE ARG n 6 224.666 7.864 235.313 1.00 0.39 \ ATOM 56 CZ ARG n 6 224.511 8.951 236.094 1.00 0.39 \ ATOM 57 NH1 ARG n 6 223.290 9.399 236.438 1.00 0.39 \ ATOM 58 NH2 ARG n 6 225.596 9.582 236.557 1.00 0.39 \ ATOM 59 N LYS n 7 223.032 6.097 230.196 1.00 0.39 \ ATOM 60 CA LYS n 7 222.626 6.935 229.112 1.00 0.39 \ ATOM 61 C LYS n 7 221.254 6.553 228.633 1.00 0.39 \ ATOM 62 O LYS n 7 220.408 7.429 228.486 1.00 0.39 \ ATOM 63 CB LYS n 7 223.609 6.777 227.988 1.00 0.39 \ ATOM 64 CG LYS n 7 223.341 7.662 226.818 1.00 0.39 \ ATOM 65 CD LYS n 7 224.609 7.838 226.030 1.00 0.39 \ ATOM 66 CE LYS n 7 224.329 8.697 224.843 1.00 0.39 \ ATOM 67 NZ LYS n 7 225.589 9.144 224.180 1.00 0.39 \ ATOM 68 N LYS n 8 220.990 5.271 228.397 1.00 0.39 \ ATOM 69 CA LYS n 8 219.656 4.873 227.926 1.00 0.39 \ ATOM 70 C LYS n 8 218.591 5.156 229.005 1.00 0.39 \ ATOM 71 O LYS n 8 217.486 5.661 228.728 1.00 0.39 \ ATOM 72 CB LYS n 8 219.659 3.404 227.524 1.00 0.39 \ ATOM 73 CG LYS n 8 218.354 2.808 226.973 1.00 0.39 \ ATOM 74 CD LYS n 8 218.560 1.295 226.794 1.00 0.39 \ ATOM 75 CE LYS n 8 219.036 0.914 225.416 1.00 0.39 \ ATOM 76 NZ LYS n 8 217.968 1.014 224.363 1.00 0.39 \ ATOM 77 N ARG n 9 218.961 4.852 230.238 1.00 0.39 \ ATOM 78 CA ARG n 9 218.133 5.166 231.374 1.00 0.39 \ ATOM 79 C ARG n 9 217.728 6.615 231.367 1.00 0.39 \ ATOM 80 O ARG n 9 216.558 6.914 231.595 1.00 0.39 \ ATOM 81 CB ARG n 9 218.860 4.853 232.702 1.00 0.39 \ ATOM 82 CG ARG n 9 217.970 4.881 233.926 1.00 0.39 \ ATOM 83 CD ARG n 9 218.777 5.107 235.150 1.00 0.39 \ ATOM 84 NE ARG n 9 218.864 4.061 236.191 1.00 0.39 \ ATOM 85 CZ ARG n 9 218.710 2.744 236.043 1.00 0.39 \ ATOM 86 NH1 ARG n 9 218.417 2.180 234.846 1.00 0.39 \ ATOM 87 NH2 ARG n 9 218.858 1.984 237.138 1.00 0.39 \ ATOM 88 N THR n 10 218.679 7.526 231.142 1.00 -2.46 \ ATOM 89 CA THR n 10 218.347 8.927 231.363 1.00 -2.46 \ ATOM 90 C THR n 10 217.506 9.489 230.213 1.00 -2.46 \ ATOM 91 O THR n 10 216.660 10.356 230.426 1.00 -2.46 \ ATOM 92 CB THR n 10 219.561 9.843 231.705 1.00 -2.46 \ ATOM 93 OG1 THR n 10 220.120 10.383 230.506 1.00 -2.46 \ ATOM 94 CG2 THR n 10 220.633 9.126 232.546 1.00 -2.46 \ ATOM 95 N ARG n 11 217.725 8.967 229.009 1.00 0.39 \ ATOM 96 CA ARG n 11 216.880 9.300 227.883 1.00 0.39 \ ATOM 97 C ARG n 11 215.453 8.929 228.178 1.00 0.39 \ ATOM 98 O ARG n 11 214.523 9.668 227.874 1.00 0.39 \ ATOM 99 CB ARG n 11 217.343 8.567 226.636 1.00 0.39 \ ATOM 100 CG ARG n 11 218.612 9.155 226.096 1.00 0.39 \ ATOM 101 CD ARG n 11 218.591 9.308 224.586 1.00 0.39 \ ATOM 102 NE ARG n 11 219.767 10.055 224.104 1.00 0.39 \ ATOM 103 CZ ARG n 11 220.867 9.508 223.569 1.00 0.39 \ ATOM 104 NH1 ARG n 11 220.980 8.172 223.449 1.00 0.39 \ ATOM 105 NH2 ARG n 11 221.858 10.306 223.154 1.00 0.39 \ ATOM 106 N ARG n 12 215.287 7.753 228.756 1.00 0.39 \ ATOM 107 CA ARG n 12 213.968 7.281 229.124 1.00 0.39 \ ATOM 108 C ARG n 12 213.377 8.202 230.157 1.00 0.39 \ ATOM 109 O ARG n 12 212.238 8.597 230.035 1.00 0.39 \ ATOM 110 CB ARG n 12 214.047 5.891 229.707 1.00 0.39 \ ATOM 111 CG ARG n 12 214.362 4.865 228.700 1.00 0.39 \ ATOM 112 CD ARG n 12 214.403 3.498 229.360 1.00 0.39 \ ATOM 113 NE ARG n 12 214.684 2.431 228.403 1.00 0.39 \ ATOM 114 CZ ARG n 12 215.201 1.267 228.747 1.00 0.39 \ ATOM 115 NH1 ARG n 12 215.490 1.042 230.026 1.00 0.39 \ ATOM 116 NH2 ARG n 12 215.422 0.350 227.806 1.00 0.39 \ ATOM 117 N LEU n 13 214.154 8.545 231.181 1.00 0.39 \ ATOM 118 CA LEU n 13 213.642 9.392 232.232 1.00 0.39 \ ATOM 119 C LEU n 13 213.101 10.680 231.642 1.00 0.39 \ ATOM 120 O LEU n 13 212.053 11.147 232.059 1.00 0.39 \ ATOM 121 CB LEU n 13 214.732 9.685 233.249 1.00 0.39 \ ATOM 122 CG LEU n 13 214.343 9.822 234.733 1.00 0.39 \ ATOM 123 CD1 LEU n 13 215.368 10.647 235.424 1.00 0.39 \ ATOM 124 CD2 LEU n 13 212.898 10.407 235.025 1.00 0.39 \ ATOM 125 N LYS n 14 213.820 11.222 230.656 1.00 0.39 \ ATOM 126 CA LYS n 14 213.485 12.485 229.991 1.00 0.39 \ ATOM 127 C LYS n 14 212.156 12.480 229.252 1.00 0.39 \ ATOM 128 O LYS n 14 211.386 13.429 229.350 1.00 0.39 \ ATOM 129 CB LYS n 14 214.583 12.899 229.032 1.00 0.39 \ ATOM 130 CG LYS n 14 215.737 13.527 229.731 1.00 0.39 \ ATOM 131 CD LYS n 14 216.758 14.131 228.759 1.00 0.39 \ ATOM 132 CE LYS n 14 216.218 15.439 228.177 1.00 0.39 \ ATOM 133 NZ LYS n 14 217.218 16.052 227.244 1.00 0.39 \ ATOM 134 N ARG n 15 211.887 11.426 228.496 1.00 0.39 \ ATOM 135 CA ARG n 15 210.627 11.345 227.796 1.00 0.39 \ ATOM 136 C ARG n 15 209.493 11.335 228.802 1.00 0.39 \ ATOM 137 O ARG n 15 208.498 12.011 228.600 1.00 0.39 \ ATOM 138 CB ARG n 15 210.603 10.129 226.885 1.00 0.39 \ ATOM 139 CG ARG n 15 211.630 10.250 225.797 1.00 0.39 \ ATOM 140 CD ARG n 15 211.212 9.483 224.577 1.00 0.39 \ ATOM 141 NE ARG n 15 211.186 8.071 224.895 1.00 0.39 \ ATOM 142 CZ ARG n 15 212.281 7.298 224.891 1.00 0.39 \ ATOM 143 NH1 ARG n 15 213.479 7.816 224.567 1.00 0.39 \ ATOM 144 NH2 ARG n 15 212.181 5.999 225.218 1.00 0.39 \ ATOM 145 N LYS n 16 209.667 10.592 229.893 1.00 0.39 \ ATOM 146 CA LYS n 16 208.723 10.583 230.989 1.00 0.39 \ ATOM 147 C LYS n 16 208.562 11.970 231.606 1.00 0.39 \ ATOM 148 O LYS n 16 207.449 12.397 231.945 1.00 0.39 \ ATOM 149 CB LYS n 16 209.139 9.597 232.058 1.00 0.39 \ ATOM 150 CG LYS n 16 208.278 8.344 232.070 1.00 0.39 \ ATOM 151 CD LYS n 16 208.455 7.499 233.381 1.00 0.39 \ ATOM 152 CE LYS n 16 208.513 8.365 234.703 1.00 0.39 \ ATOM 153 NZ LYS n 16 209.403 7.792 235.830 1.00 0.39 \ ATOM 154 N ARG n 17 209.654 12.700 231.747 1.00 0.39 \ ATOM 155 CA ARG n 17 209.507 14.018 232.298 1.00 0.39 \ ATOM 156 C ARG n 17 208.811 14.935 231.313 1.00 0.39 \ ATOM 157 O ARG n 17 207.889 15.627 231.691 1.00 0.39 \ ATOM 158 CB ARG n 17 210.822 14.570 232.835 1.00 0.39 \ ATOM 159 CG ARG n 17 211.082 14.110 234.259 1.00 0.39 \ ATOM 160 CD ARG n 17 211.866 15.101 235.064 1.00 0.39 \ ATOM 161 NE ARG n 17 213.278 14.767 234.941 1.00 0.39 \ ATOM 162 CZ ARG n 17 214.008 14.164 235.886 1.00 0.39 \ ATOM 163 NH1 ARG n 17 213.481 13.838 237.080 1.00 0.39 \ ATOM 164 NH2 ARG n 17 215.285 13.914 235.634 1.00 0.39 \ ATOM 165 N ARG n 18 209.208 14.914 230.049 1.00 0.39 \ ATOM 166 CA ARG n 18 208.522 15.710 229.045 1.00 0.39 \ ATOM 167 C ARG n 18 207.021 15.494 229.070 1.00 0.39 \ ATOM 168 O ARG n 18 206.242 16.434 228.957 1.00 0.39 \ ATOM 169 CB ARG n 18 209.031 15.352 227.668 1.00 0.39 \ ATOM 170 CG ARG n 18 210.157 16.215 227.196 1.00 0.39 \ ATOM 171 CD ARG n 18 210.305 16.091 225.691 1.00 0.39 \ ATOM 172 NE ARG n 18 209.245 16.803 224.960 1.00 0.39 \ ATOM 173 CZ ARG n 18 209.080 16.762 223.632 1.00 0.39 \ ATOM 174 NH1 ARG n 18 208.079 17.445 223.061 1.00 0.39 \ ATOM 175 NH2 ARG n 18 209.910 16.031 222.873 1.00 0.39 \ ATOM 176 N LYS n 19 206.640 14.233 229.234 1.00 0.39 \ ATOM 177 CA LYS n 19 205.257 13.797 229.215 1.00 0.39 \ ATOM 178 C LYS n 19 204.481 14.298 230.407 1.00 0.39 \ ATOM 179 O LYS n 19 203.414 14.888 230.253 1.00 0.39 \ ATOM 180 CB LYS n 19 205.189 12.284 229.208 1.00 0.39 \ ATOM 181 CG LYS n 19 204.499 11.676 227.995 1.00 0.39 \ ATOM 182 CD LYS n 19 205.503 11.257 226.907 1.00 0.39 \ ATOM 183 CE LYS n 19 204.831 10.518 225.724 1.00 0.39 \ ATOM 184 NZ LYS n 19 204.503 9.057 225.941 1.00 0.39 \ ATOM 185 N VAL n 20 204.995 14.068 231.608 1.00 -2.46 \ ATOM 186 CA VAL n 20 204.273 14.567 232.784 1.00 -2.46 \ ATOM 187 C VAL n 20 204.114 16.058 232.765 1.00 -2.46 \ ATOM 188 O VAL n 20 203.076 16.596 233.098 1.00 -2.46 \ ATOM 189 CB VAL n 20 204.938 14.266 234.104 1.00 -2.46 \ ATOM 190 CG1 VAL n 20 203.880 14.448 235.149 1.00 -2.46 \ ATOM 191 CG2 VAL n 20 205.479 12.843 234.153 1.00 -2.46 \ ATOM 192 N ARG n 21 205.168 16.753 232.391 1.00 0.39 \ ATOM 193 CA ARG n 21 205.029 18.195 232.229 1.00 0.39 \ ATOM 194 C ARG n 21 203.907 18.571 231.205 1.00 0.39 \ ATOM 195 O ARG n 21 203.220 19.570 231.381 1.00 0.39 \ ATOM 196 CB ARG n 21 206.399 18.857 231.959 1.00 0.39 \ ATOM 197 CG ARG n 21 206.289 20.302 231.537 1.00 0.39 \ ATOM 198 CD ARG n 21 207.125 21.285 232.315 1.00 0.39 \ ATOM 199 NE ARG n 21 208.197 21.792 231.475 1.00 0.39 \ ATOM 200 CZ ARG n 21 208.558 23.064 231.370 1.00 0.39 \ ATOM 201 NH1 ARG n 21 207.942 23.994 232.072 1.00 0.39 \ ATOM 202 NH2 ARG n 21 209.545 23.390 230.552 1.00 0.39 \ ATOM 203 N ALA n 22 203.700 17.728 230.193 1.00 -2.46 \ ATOM 204 CA ALA n 22 202.771 17.996 229.087 1.00 -2.46 \ ATOM 205 C ALA n 22 201.322 17.930 229.516 1.00 -2.46 \ ATOM 206 O ALA n 22 200.466 18.640 228.983 1.00 -2.46 \ ATOM 207 CB ALA n 22 202.991 17.010 227.986 1.00 -2.46 \ ATOM 208 N ARG n 23 201.060 17.046 230.472 1.00 0.39 \ ATOM 209 CA ARG n 23 199.792 16.938 231.169 1.00 0.39 \ ATOM 210 C ARG n 23 199.168 18.294 231.557 1.00 0.39 \ ATOM 211 O ARG n 23 197.987 18.395 231.869 1.00 0.39 \ ATOM 212 CB ARG n 23 200.067 16.159 232.433 1.00 0.39 \ ATOM 213 CG ARG n 23 199.162 15.078 232.660 1.00 0.39 \ ATOM 214 CD ARG n 23 199.853 13.765 232.588 1.00 0.39 \ ATOM 215 NE ARG n 23 199.970 13.199 233.926 1.00 0.39 \ ATOM 216 CZ ARG n 23 198.945 12.881 234.737 1.00 0.39 \ ATOM 217 NH1 ARG n 23 197.658 13.096 234.326 1.00 0.39 \ ATOM 218 NH2 ARG n 23 199.222 12.357 235.971 1.00 0.39 \ ATOM 219 N SER n 24 199.972 19.344 231.543 1.00 -1.00 \ ATOM 220 CA SER n 24 199.563 20.633 232.029 1.00 -1.00 \ ATOM 221 C SER n 24 199.676 21.563 230.845 1.00 -1.00 \ ATOM 222 O SER n 24 199.352 22.756 230.954 1.00 -1.00 \ ATOM 223 CB SER n 24 200.520 21.054 233.136 1.00 -1.00 \ ATOM 224 OG SER n 24 201.344 19.942 233.512 1.00 -1.00 \ ATOM 225 N LYS n 25 200.106 20.986 229.711 1.00 -1.00 \ ATOM 226 CA LYS n 25 200.461 21.681 228.448 1.00 -1.00 \ ATOM 227 C LYS n 25 201.797 22.437 228.553 1.00 -1.00 \ ATOM 228 O LYS n 25 202.518 22.354 229.567 1.00 -1.00 \ ATOM 229 CB LYS n 25 199.332 22.595 227.908 1.00 -1.00 \ ATOM 230 CG LYS n 25 197.889 22.062 228.081 1.00 -1.00 \ ATOM 231 CD LYS n 25 197.471 20.995 227.049 1.00 -1.00 \ ATOM 232 CE LYS n 25 195.970 20.640 227.200 1.00 -1.00 \ ATOM 233 NZ LYS n 25 195.283 20.219 225.925 1.00 -1.00 \ """, "e3u5in1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e3u5in1_csv", state=0, origin=1) cmd.zoom("e3u5in1_csv", animate=-1)