cmd.read_pdbstr("""\ ATOM 1 N VAL F 2 12.498 13.312 -1.096 1.00 -1.00 \ ATOM 2 CA VAL F 2 12.149 11.922 -1.511 1.00 -1.00 \ ATOM 3 C VAL F 2 10.686 11.911 -2.431 1.00 -1.00 \ ATOM 4 O VAL F 2 10.765 11.240 -3.231 1.00 -1.00 \ ATOM 5 CB VAL F 2 11.826 10.948 -0.596 1.00 -1.00 \ ATOM 6 CG1 VAL F 2 10.770 9.716 -1.036 1.00 -1.00 \ ATOM 7 CG2 VAL F 2 13.464 10.500 0.021 1.00 -1.00 \ ATOM 8 N ASN F 3 9.402 12.713 -2.336 1.00 -0.47 \ ATOM 9 CA ASN F 3 7.950 12.725 -3.175 1.00 -0.47 \ ATOM 10 C ASN F 3 8.471 12.995 -4.290 1.00 -0.47 \ ATOM 11 O ASN F 3 7.936 12.245 -5.067 1.00 -0.47 \ ATOM 12 CB ASN F 3 6.561 13.638 -2.902 1.00 -0.47 \ ATOM 13 CG ASN F 3 6.540 14.969 -3.456 1.00 -0.47 \ ATOM 14 OD1 ASN F 3 5.389 15.266 -4.161 1.00 -0.47 \ ATOM 15 ND2 ASN F 3 7.797 15.797 -3.135 1.00 -0.47 \ ATOM 16 N GLN F 4 9.571 13.999 -4.341 1.00 0.23 \ ATOM 17 CA GLN F 4 10.211 14.358 -5.333 1.00 0.23 \ ATOM 18 C GLN F 4 11.237 13.230 -5.723 1.00 0.23 \ ATOM 19 O GLN F 4 11.082 12.916 -6.692 1.00 0.23 \ ATOM 20 CB GLN F 4 11.204 15.650 -5.202 1.00 0.23 \ ATOM 21 CG GLN F 4 10.076 16.868 -5.295 1.00 0.23 \ ATOM 22 CD GLN F 4 10.667 17.900 -6.033 1.00 0.23 \ ATOM 23 OE1 GLN F 4 12.168 18.191 -5.977 1.00 0.23 \ ATOM 24 NE2 GLN F 4 9.503 18.458 -6.743 1.00 0.23 \ ATOM 25 N HIS F 5 12.239 12.590 -4.971 1.00 -0.05 \ ATOM 26 CA HIS F 5 13.136 11.418 -5.255 1.00 -0.05 \ ATOM 27 C HIS F 5 11.980 10.292 -5.761 1.00 -0.05 \ ATOM 28 O HIS F 5 12.338 9.689 -6.576 1.00 -0.05 \ ATOM 29 CB HIS F 5 14.224 10.862 -4.270 1.00 -0.05 \ ATOM 30 CG HIS F 5 15.193 9.664 -4.529 1.00 -0.05 \ ATOM 31 ND1 HIS F 5 14.770 8.387 -4.262 1.00 -0.05 \ ATOM 32 CD2 HIS F 5 16.528 9.543 -5.071 1.00 -0.05 \ ATOM 33 CE1 HIS F 5 15.802 7.526 -4.626 1.00 -0.05 \ ATOM 34 NE2 HIS F 5 16.885 8.205 -5.116 1.00 -0.05 \ ATOM 35 N LEU F 6 10.635 9.983 -5.278 1.00 1.11 \ ATOM 36 CA LEU F 6 9.460 8.949 -5.729 1.00 1.11 \ ATOM 37 C LEU F 6 8.545 9.333 -6.828 1.00 1.11 \ ATOM 38 O LEU F 6 8.381 8.539 -7.591 1.00 1.11 \ ATOM 39 CB LEU F 6 8.173 8.603 -4.957 1.00 1.11 \ ATOM 40 CG LEU F 6 8.945 8.173 -3.832 1.00 1.11 \ ATOM 41 CD1 LEU F 6 7.548 7.886 -3.108 1.00 1.11 \ ATOM 42 CD2 LEU F 6 10.171 7.032 -3.846 1.00 1.11 \ ATOM 43 N CYS F 7 7.932 10.542 -6.903 1.00 1.72 \ ATOM 44 CA CYS F 7 7.094 11.036 -7.920 1.00 1.72 \ ATOM 45 C CYS F 7 8.247 10.948 -8.796 1.00 1.72 \ ATOM 46 O CYS F 7 7.690 10.584 -9.719 1.00 1.72 \ ATOM 47 CB CYS F 7 6.519 12.446 -7.767 1.00 1.72 \ ATOM 48 SG CYS F 7 5.679 13.310 -9.002 1.00 1.72 \ ATOM 49 N GLY F 8 9.846 11.269 -8.516 1.00 0.65 \ ATOM 50 CA GLY F 8 11.032 11.291 -9.304 1.00 0.65 \ ATOM 51 C GLY F 8 11.185 9.932 -9.829 1.00 0.65 \ ATOM 52 O GLY F 8 11.432 9.859 -10.776 1.00 0.65 \ ATOM 53 N SER F 9 10.957 8.857 -9.228 1.00 -0.48 \ ATOM 54 CA SER F 9 11.033 7.519 -9.651 1.00 -0.48 \ ATOM 55 C SER F 9 9.556 7.242 -10.524 1.00 -0.48 \ ATOM 56 O SER F 9 9.718 6.582 -11.332 1.00 -0.48 \ ATOM 57 CB SER F 9 11.045 6.503 -8.716 1.00 -0.48 \ ATOM 58 OG SER F 9 11.355 5.205 -9.110 1.00 -0.48 \ ATOM 59 N HIS F 10 8.080 7.669 -10.331 1.00 -0.22 \ ATOM 60 CA HIS F 10 6.567 7.432 -11.104 1.00 -0.22 \ ATOM 61 C HIS F 10 6.774 8.350 -12.078 1.00 -0.22 \ ATOM 62 O HIS F 10 6.171 8.108 -13.038 1.00 -0.22 \ ATOM 63 CB HIS F 10 4.985 7.902 -10.597 1.00 -0.22 \ ATOM 64 CG HIS F 10 4.551 7.024 -9.701 1.00 -0.22 \ ATOM 65 ND1 HIS F 10 3.436 5.977 -9.882 1.00 -0.22 \ ATOM 66 CD2 HIS F 10 5.001 7.073 -8.617 1.00 -0.22 \ ATOM 67 CE1 HIS F 10 3.294 5.368 -8.954 1.00 -0.22 \ ATOM 68 NE2 HIS F 10 4.204 6.033 -8.161 1.00 -0.22 \ ATOM 69 N LEU F 11 7.559 9.466 -11.837 1.00 1.72 \ ATOM 70 CA LEU F 11 7.702 10.401 -12.766 1.00 1.72 \ ATOM 71 C LEU F 11 8.777 9.794 -13.584 1.00 1.72 \ ATOM 72 O LEU F 11 8.436 10.057 -14.537 1.00 1.72 \ ATOM 73 CB LEU F 11 8.566 11.699 -12.368 1.00 1.72 \ ATOM 74 CG LEU F 11 7.450 12.891 -12.331 1.00 1.72 \ ATOM 75 CD1 LEU F 11 8.553 13.992 -11.772 1.00 1.72 \ ATOM 76 CD2 LEU F 11 6.663 13.316 -13.461 1.00 1.72 \ ATOM 77 N VAL F 12 10.155 9.097 -13.186 1.00 0.65 \ ATOM 78 CA VAL F 12 11.228 8.550 -13.928 1.00 0.65 \ ATOM 79 C VAL F 12 10.373 7.419 -14.575 1.00 0.65 \ ATOM 80 O VAL F 12 10.590 7.188 -15.552 1.00 0.65 \ ATOM 81 CB VAL F 12 13.046 8.180 -13.388 1.00 0.65 \ ATOM 82 CG1 VAL F 12 14.077 9.463 -13.164 1.00 0.65 \ ATOM 83 CG2 VAL F 12 13.067 7.303 -12.360 1.00 0.65 \ ATOM 84 N GLU F 13 9.390 6.665 -14.050 1.00 0.69 \ ATOM 85 CA GLU F 13 8.455 5.550 -14.627 1.00 0.69 \ ATOM 86 C GLU F 13 7.183 6.088 -15.540 1.00 0.69 \ ATOM 87 O GLU F 13 6.897 5.535 -16.408 1.00 0.69 \ ATOM 88 CB GLU F 13 7.471 4.736 -13.828 1.00 0.69 \ ATOM 89 CG GLU F 13 8.479 4.118 -12.834 1.00 0.69 \ ATOM 90 CD GLU F 13 7.363 3.237 -12.161 1.00 0.69 \ ATOM 91 OE1 GLU F 13 6.881 2.089 -12.512 1.00 0.69 \ ATOM 92 OE2 GLU F 13 6.934 3.716 -11.308 1.00 0.69 \ ATOM 93 N ALA F 14 6.310 7.127 -15.300 1.00 -0.05 \ ATOM 94 CA ALA F 14 5.119 7.885 -16.113 1.00 -0.05 \ ATOM 95 C ALA F 14 5.990 8.508 -17.062 1.00 -0.05 \ ATOM 96 O ALA F 14 5.401 8.383 -18.027 1.00 -0.05 \ ATOM 97 CB ALA F 14 4.268 9.020 -15.480 1.00 -0.05 \ ATOM 98 N LEU F 15 7.430 9.124 -16.777 1.00 1.72 \ ATOM 99 CA LEU F 15 8.374 9.629 -17.616 1.00 1.72 \ ATOM 100 C LEU F 15 8.947 8.508 -18.307 1.00 1.72 \ ATOM 101 O LEU F 15 9.031 8.685 -19.287 1.00 1.72 \ ATOM 102 CB LEU F 15 9.900 10.430 -17.102 1.00 1.72 \ ATOM 103 CG LEU F 15 9.657 11.858 -16.673 1.00 1.72 \ ATOM 104 CD1 LEU F 15 11.347 12.422 -16.201 1.00 1.72 \ ATOM 105 CD2 LEU F 15 8.715 12.927 -17.519 1.00 1.72 \ ATOM 106 N TYR F 16 9.371 7.354 -17.801 1.00 -0.23 \ ATOM 107 CA TYR F 16 9.920 6.248 -18.387 1.00 -0.23 \ ATOM 108 C TYR F 16 8.538 5.806 -19.268 1.00 -0.23 \ ATOM 109 O TYR F 16 8.810 5.482 -20.176 1.00 -0.23 \ ATOM 110 CB TYR F 16 10.371 5.068 -17.580 1.00 -0.23 \ ATOM 111 CG TYR F 16 10.836 3.821 -18.170 1.00 -0.23 \ ATOM 112 CD1 TYR F 16 12.358 3.742 -18.554 1.00 -0.23 \ ATOM 113 CD2 TYR F 16 9.762 2.735 -18.317 1.00 -0.23 \ ATOM 114 CE1 TYR F 16 12.819 2.611 -19.099 1.00 -0.23 \ ATOM 115 CE2 TYR F 16 10.216 1.592 -18.851 1.00 -0.23 \ ATOM 116 CZ TYR F 16 11.732 1.526 -19.218 1.00 -0.23 \ ATOM 117 OH TYR F 16 12.119 0.394 -19.780 1.00 -0.23 \ ATOM 118 N LEU F 17 7.038 5.759 -18.964 1.00 -0.22 \ ATOM 119 CA LEU F 17 5.635 5.381 -19.676 1.00 -0.22 \ ATOM 120 C LEU F 17 5.130 6.473 -20.524 1.00 -0.22 \ ATOM 121 O LEU F 17 4.770 6.222 -21.512 1.00 -0.22 \ ATOM 122 CB LEU F 17 4.210 5.105 -19.001 1.00 -0.22 \ ATOM 123 CG LEU F 17 2.582 5.068 -19.720 1.00 -0.22 \ ATOM 124 CD1 LEU F 17 2.498 3.878 -20.567 1.00 -0.22 \ ATOM 125 CD2 LEU F 17 1.096 5.119 -19.062 1.00 -0.22 \ ATOM 126 N VAL F 18 5.127 7.696 -20.163 1.00 0.22 \ ATOM 127 CA VAL F 18 4.477 8.809 -20.944 1.00 0.22 \ ATOM 128 C VAL F 18 5.653 9.049 -21.772 1.00 0.22 \ ATOM 129 O VAL F 18 5.146 9.322 -22.730 1.00 0.22 \ ATOM 130 CB VAL F 18 4.286 10.128 -20.318 1.00 0.22 \ ATOM 131 CG1 VAL F 18 3.951 11.349 -21.139 1.00 0.22 \ ATOM 132 CG2 VAL F 18 2.876 9.975 -19.706 1.00 0.22 \ ATOM 133 N CYS F 19 7.251 8.972 -21.409 1.00 1.72 \ ATOM 134 CA CYS F 19 8.454 9.445 -22.100 1.00 1.72 \ ATOM 135 C CYS F 19 8.916 8.382 -22.892 1.00 1.72 \ ATOM 136 O CYS F 19 9.364 8.722 -23.732 1.00 1.72 \ ATOM 137 CB CYS F 19 9.969 9.959 -21.436 1.00 1.72 \ ATOM 138 SG CYS F 19 9.501 11.391 -20.640 1.00 1.72 \ ATOM 139 N GLY F 20 8.753 7.111 -22.635 1.00 -0.24 \ ATOM 140 CA GLY F 20 9.230 6.042 -23.371 1.00 -0.24 \ ATOM 141 C GLY F 20 11.048 6.011 -23.589 1.00 -0.24 \ ATOM 142 O GLY F 20 12.183 6.305 -22.864 1.00 -0.24 \ ATOM 143 N GLU F 21 11.352 5.705 -24.595 1.00 0.21 \ ATOM 144 CA GLU F 21 13.097 5.464 -24.851 1.00 0.21 \ ATOM 145 C GLU F 21 14.243 6.613 -24.480 1.00 0.21 \ ATOM 146 O GLU F 21 15.662 6.427 -23.965 1.00 0.21 \ ATOM 147 CB GLU F 21 13.114 5.293 -26.075 1.00 0.21 \ ATOM 148 CG GLU F 21 12.496 3.974 -26.554 1.00 0.21 \ ATOM 149 CD GLU F 21 10.777 3.590 -26.286 1.00 0.21 \ ATOM 150 OE1 GLU F 21 9.818 4.483 -25.999 1.00 0.21 \ ATOM 151 OE2 GLU F 21 10.394 2.377 -26.364 1.00 0.21 \ ATOM 152 N ARG F 22 13.551 7.793 -24.736 1.00 -0.66 \ ATOM 153 CA ARG F 22 14.362 9.109 -24.594 1.00 -0.66 \ ATOM 154 C ARG F 22 15.288 9.329 -23.457 1.00 -0.66 \ ATOM 155 O ARG F 22 16.563 10.042 -23.309 1.00 -0.66 \ ATOM 156 CB ARG F 22 13.038 10.209 -24.824 1.00 -0.66 \ ATOM 157 CG ARG F 22 11.884 10.131 -25.917 1.00 -0.66 \ ATOM 158 CD ARG F 22 10.008 10.352 -25.773 1.00 -0.66 \ ATOM 159 NE ARG F 22 9.620 11.746 -25.540 1.00 -0.66 \ ATOM 160 CZ ARG F 22 8.271 12.179 -25.127 1.00 -0.66 \ ATOM 161 NH1 ARG F 22 7.090 11.356 -24.882 1.00 -0.66 \ ATOM 162 NH2 ARG F 22 8.090 13.475 -24.975 1.00 -0.66 \ ATOM 163 N GLY F 23 14.648 8.722 -22.653 1.00 1.72 \ ATOM 164 CA GLY F 23 15.288 8.994 -21.537 1.00 1.72 \ ATOM 165 C GLY F 23 14.845 10.371 -21.184 1.00 1.72 \ ATOM 166 O GLY F 23 13.878 11.116 -21.771 1.00 1.72 \ ATOM 167 N PHE F 24 15.615 10.744 -20.235 1.00 1.09 \ ATOM 168 CA PHE F 24 15.066 11.888 -19.684 1.00 1.09 \ ATOM 169 C PHE F 24 16.549 12.510 -18.990 1.00 1.09 \ ATOM 170 O PHE F 24 17.808 11.842 -18.669 1.00 1.09 \ ATOM 171 CB PHE F 24 13.671 11.483 -18.992 1.00 1.09 \ ATOM 172 CG PHE F 24 14.125 10.328 -18.205 1.00 1.09 \ ATOM 173 CD1 PHE F 24 15.054 10.554 -17.201 1.00 1.09 \ ATOM 174 CD2 PHE F 24 13.631 9.004 -18.496 1.00 1.09 \ ATOM 175 CE1 PHE F 24 15.446 9.454 -16.446 1.00 1.09 \ ATOM 176 CE2 PHE F 24 14.033 7.916 -17.766 1.00 1.09 \ ATOM 177 CZ PHE F 24 14.986 8.171 -16.749 1.00 1.09 \ ATOM 178 N TYR F 25 16.351 13.783 -18.731 1.00 0.52 \ ATOM 179 CA TYR F 25 17.615 14.553 -18.064 1.00 0.52 \ ATOM 180 C TYR F 25 17.519 14.354 -16.848 1.00 0.52 \ ATOM 181 O TYR F 25 16.325 14.768 -16.478 1.00 0.52 \ ATOM 182 CB TYR F 25 17.422 16.022 -18.366 1.00 0.52 \ """, "e3zs2F1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e3zs2F1_csv", state=0, origin=1) cmd.zoom("e3zs2F1_csv", animate=-1)