cmd.read_pdbstr("""\ ATOM 1 N GLY A 1 7.780 -7.513 -25.670 1.00 0.33 \ ATOM 2 CA GLY A 1 6.805 -8.609 -25.344 1.00 0.33 \ ATOM 3 C GLY A 1 6.256 -8.349 -23.969 1.00 0.33 \ ATOM 4 O GLY A 1 6.453 -7.259 -23.375 1.00 0.33 \ ATOM 5 N ILE A 2 5.598 -9.376 -23.424 1.00 0.44 \ ATOM 6 CA ILE A 2 4.861 -9.201 -22.198 1.00 0.44 \ ATOM 7 C ILE A 2 5.750 -8.818 -21.030 1.00 0.44 \ ATOM 8 O ILE A 2 5.347 -8.101 -20.134 1.00 0.44 \ ATOM 9 CB ILE A 2 4.021 -10.449 -21.910 1.00 0.44 \ ATOM 10 CG1 ILE A 2 2.972 -10.150 -20.828 1.00 0.44 \ ATOM 11 CG2 ILE A 2 4.934 -11.645 -21.503 1.00 0.44 \ ATOM 12 CD1 ILE A 2 2.007 -11.307 -20.499 1.00 0.44 \ ATOM 13 N VAL A 3 6.992 -9.320 -20.914 1.00 1.08 \ ATOM 14 CA VAL A 3 7.798 -8.959 -19.800 1.00 1.08 \ ATOM 15 C VAL A 3 8.179 -7.469 -19.809 1.00 1.08 \ ATOM 16 O VAL A 3 8.175 -6.835 -18.775 1.00 1.08 \ ATOM 17 CB VAL A 3 9.020 -9.842 -19.725 1.00 1.08 \ ATOM 18 CG1 VAL A 3 10.031 -9.350 -18.703 1.00 1.08 \ ATOM 19 CG2 VAL A 3 8.534 -11.231 -19.310 1.00 1.08 \ ATOM 20 N GLU A 4 8.533 -6.981 -20.983 1.00 0.21 \ ATOM 21 CA GLU A 4 8.889 -5.542 -21.140 1.00 0.21 \ ATOM 22 C GLU A 4 7.684 -4.704 -20.787 1.00 0.21 \ ATOM 23 O GLU A 4 7.817 -3.655 -20.098 1.00 0.21 \ ATOM 24 CB GLU A 4 9.258 -5.230 -22.572 1.00 0.21 \ ATOM 25 CG GLU A 4 10.550 -5.928 -22.980 1.00 0.21 \ ATOM 26 CD GLU A 4 10.590 -7.525 -22.848 1.00 0.21 \ ATOM 27 OE1 GLU A 4 9.658 -8.265 -23.363 1.00 0.21 \ ATOM 28 OE2 GLU A 4 11.596 -8.052 -22.236 1.00 0.21 \ ATOM 29 N GLN A 5 6.493 -5.150 -21.154 1.00 0.00 \ ATOM 30 CA GLN A 5 5.292 -4.314 -20.908 1.00 0.00 \ ATOM 31 C GLN A 5 4.725 -4.383 -19.488 1.00 0.00 \ ATOM 32 O GLN A 5 4.040 -3.446 -18.970 1.00 0.00 \ ATOM 33 CB GLN A 5 4.247 -4.569 -21.938 1.00 0.00 \ ATOM 34 CG GLN A 5 4.610 -4.236 -23.398 1.00 0.00 \ ATOM 35 CD GLN A 5 5.457 -2.941 -23.610 1.00 0.00 \ ATOM 36 OE1 GLN A 5 6.464 -2.959 -24.394 1.00 0.00 \ ATOM 37 NE2 GLN A 5 5.108 -1.846 -22.875 1.00 0.00 \ ATOM 38 N CYS A 6 4.863 -5.550 -18.832 1.00 1.70 \ ATOM 39 CA CYS A 6 4.213 -5.804 -17.601 1.00 1.70 \ ATOM 40 C CYS A 6 4.997 -6.079 -16.409 1.00 1.70 \ ATOM 41 O CYS A 6 4.528 -5.979 -15.289 1.00 1.70 \ ATOM 42 CB CYS A 6 3.171 -6.984 -17.864 1.00 1.70 \ ATOM 43 SG CYS A 6 1.729 -6.617 -18.759 1.00 1.70 \ ATOM 44 N CYS A 7 6.269 -6.450 -16.580 1.00 1.70 \ ATOM 45 CA CYS A 7 7.172 -6.724 -15.517 1.00 1.70 \ ATOM 46 C CYS A 7 8.160 -5.537 -15.323 1.00 1.70 \ ATOM 47 O CYS A 7 8.227 -4.967 -14.195 1.00 1.70 \ ATOM 48 CB CYS A 7 7.925 -8.014 -15.888 1.00 1.70 \ ATOM 49 SG CYS A 7 9.248 -8.485 -14.740 1.00 1.70 \ ATOM 50 N THR A 8 8.842 -5.208 -16.426 1.00 -0.68 \ ATOM 51 CA THR A 8 9.868 -4.136 -16.502 1.00 -0.68 \ ATOM 52 C THR A 8 9.171 -2.771 -16.367 1.00 -0.68 \ ATOM 53 O THR A 8 9.715 -1.790 -15.872 1.00 -0.68 \ ATOM 54 CB THR A 8 10.629 -4.263 -17.854 1.00 -0.68 \ ATOM 55 OG1 THR A 8 11.212 -5.540 -17.896 1.00 -0.68 \ ATOM 56 CG2 THR A 8 11.699 -3.281 -17.919 1.00 -0.68 \ ATOM 57 N SER A 9 7.936 -2.720 -16.798 1.00 -0.80 \ ATOM 58 CA SER A 9 7.102 -1.536 -16.657 1.00 -0.80 \ ATOM 59 C SER A 9 5.733 -1.973 -16.150 1.00 -0.80 \ ATOM 60 O SER A 9 5.488 -3.164 -15.947 1.00 -0.80 \ ATOM 61 CB SER A 9 7.068 -0.783 -17.997 1.00 -0.80 \ ATOM 62 OG SER A 9 6.290 -1.425 -18.964 1.00 -0.80 \ ATOM 63 N ILE A 10 4.884 -1.013 -15.857 1.00 -0.79 \ ATOM 64 CA ILE A 10 3.648 -1.343 -15.219 1.00 -0.79 \ ATOM 65 C ILE A 10 2.622 -1.922 -16.204 1.00 -0.79 \ ATOM 66 O ILE A 10 2.378 -1.411 -17.278 1.00 -0.79 \ ATOM 67 CB ILE A 10 3.044 -0.083 -14.510 1.00 -0.79 \ ATOM 68 CG1 ILE A 10 4.023 0.439 -13.516 1.00 -0.79 \ ATOM 69 CG2 ILE A 10 1.695 -0.403 -13.862 1.00 -0.79 \ ATOM 70 CD1 ILE A 10 3.537 1.762 -12.980 1.00 -0.79 \ ATOM 71 N CYS A 11 2.028 -3.074 -15.798 1.00 1.70 \ ATOM 72 CA CYS A 11 1.093 -3.744 -16.562 1.00 1.70 \ ATOM 73 C CYS A 11 -0.241 -2.993 -16.619 1.00 1.70 \ ATOM 74 O CYS A 11 -0.437 -2.006 -15.928 1.00 1.70 \ ATOM 75 CB CYS A 11 0.950 -5.144 -15.930 1.00 1.70 \ ATOM 76 SG CYS A 11 0.239 -6.375 -17.102 1.00 1.70 \ ATOM 77 N SER A 12 -1.098 -3.452 -17.497 1.00 -0.16 \ ATOM 78 CA SER A 12 -2.466 -2.938 -17.633 1.00 -0.16 \ ATOM 79 C SER A 12 -3.364 -4.053 -18.180 1.00 -0.16 \ ATOM 80 O SER A 12 -2.906 -5.012 -18.883 1.00 -0.16 \ ATOM 81 CB SER A 12 -2.488 -1.746 -18.584 1.00 -0.16 \ ATOM 82 OG SER A 12 -2.190 -2.080 -19.939 1.00 -0.16 \ ATOM 83 N LEU A 13 -4.660 -3.891 -17.953 1.00 -0.38 \ ATOM 84 CA LEU A 13 -5.573 -4.888 -18.480 1.00 -0.38 \ ATOM 85 C LEU A 13 -5.498 -4.916 -19.985 1.00 -0.38 \ ATOM 86 O LEU A 13 -5.608 -5.975 -20.625 1.00 -0.38 \ ATOM 87 CB LEU A 13 -6.979 -4.530 -18.060 1.00 -0.38 \ ATOM 88 CG LEU A 13 -8.090 -5.315 -18.543 1.00 -0.38 \ ATOM 89 CD1 LEU A 13 -7.840 -6.755 -18.171 1.00 -0.38 \ ATOM 90 CD2 LEU A 13 -9.466 -4.936 -18.060 1.00 -0.38 \ ATOM 91 N TYR A 14 -5.356 -3.749 -20.644 1.00 -1.24 \ ATOM 92 CA TYR A 14 -5.304 -3.698 -22.073 1.00 -1.24 \ ATOM 93 C TYR A 14 -4.172 -4.585 -22.642 1.00 -1.24 \ ATOM 94 O TYR A 14 -4.377 -5.351 -23.599 1.00 -1.24 \ ATOM 95 CB TYR A 14 -5.108 -2.183 -22.497 1.00 -1.24 \ ATOM 96 CG TYR A 14 -5.143 -2.052 -23.979 1.00 -1.24 \ ATOM 97 CD1 TYR A 14 -4.019 -2.433 -24.745 1.00 -1.24 \ ATOM 98 CD2 TYR A 14 -6.327 -1.578 -24.611 1.00 -1.24 \ ATOM 99 CE1 TYR A 14 -4.020 -2.324 -26.110 1.00 -1.24 \ ATOM 100 CE2 TYR A 14 -6.375 -1.473 -26.007 1.00 -1.24 \ ATOM 101 CZ TYR A 14 -5.208 -1.902 -26.738 1.00 -1.24 \ ATOM 102 OH TYR A 14 -5.165 -1.756 -28.116 1.00 -1.24 \ ATOM 103 N GLN A 15 -2.999 -4.477 -22.050 1.00 -0.57 \ ATOM 104 CA GLN A 15 -1.864 -5.237 -22.419 1.00 -0.57 \ ATOM 105 C GLN A 15 -2.030 -6.707 -22.090 1.00 -0.57 \ ATOM 106 O GLN A 15 -1.697 -7.551 -22.915 1.00 -0.57 \ ATOM 107 CB GLN A 15 -0.596 -4.713 -21.766 1.00 -0.57 \ ATOM 108 CG GLN A 15 -0.094 -3.361 -22.340 1.00 -0.57 \ ATOM 109 CD GLN A 15 0.296 -3.476 -23.818 1.00 -0.57 \ ATOM 110 OE1 GLN A 15 -0.238 -2.730 -24.711 1.00 -0.57 \ ATOM 111 NE2 GLN A 15 1.138 -4.504 -24.117 1.00 -0.57 \ ATOM 112 N LEU A 16 -2.504 -7.053 -20.895 1.00 0.77 \ ATOM 113 CA LEU A 16 -2.741 -8.493 -20.618 1.00 0.77 \ ATOM 114 C LEU A 16 -3.634 -9.125 -21.610 1.00 0.77 \ ATOM 115 O LEU A 16 -3.472 -10.312 -22.010 1.00 0.77 \ ATOM 116 CB LEU A 16 -3.244 -8.742 -19.222 1.00 0.77 \ ATOM 117 CG LEU A 16 -2.350 -8.564 -18.076 1.00 0.77 \ ATOM 118 CD1 LEU A 16 -3.182 -8.576 -16.809 1.00 0.77 \ ATOM 119 CD2 LEU A 16 -1.254 -9.639 -18.033 1.00 0.77 \ ATOM 120 N GLU A 17 -4.761 -8.473 -22.012 1.00 0.32 \ ATOM 121 CA GLU A 17 -5.675 -9.044 -22.923 1.00 0.32 \ ATOM 122 C GLU A 17 -5.116 -9.260 -24.296 1.00 0.32 \ ATOM 123 O GLU A 17 -5.663 -10.083 -25.045 1.00 0.32 \ ATOM 124 CB GLU A 17 -7.037 -8.304 -22.923 1.00 0.32 \ ATOM 125 CG GLU A 17 -7.863 -8.440 -21.698 1.00 0.32 \ ATOM 126 CD GLU A 17 -9.351 -8.238 -21.903 1.00 0.32 \ ATOM 127 OE1 GLU A 17 -9.696 -7.509 -22.924 1.00 0.32 \ ATOM 128 OE2 GLU A 17 -10.180 -8.763 -21.094 1.00 0.32 \ ATOM 129 N ASN A 18 -3.983 -8.665 -24.616 1.00 -0.96 \ ATOM 130 CA ASN A 18 -3.302 -8.926 -25.883 1.00 -0.96 \ ATOM 131 C ASN A 18 -2.748 -10.373 -25.930 1.00 -0.96 \ ATOM 132 O ASN A 18 -2.404 -10.851 -27.010 1.00 -0.96 \ ATOM 133 CB ASN A 18 -2.147 -8.008 -26.064 1.00 -0.96 \ ATOM 134 CG ASN A 18 -2.591 -6.616 -26.598 1.00 -0.96 \ ATOM 135 OD1 ASN A 18 -3.576 -6.513 -27.369 1.00 -0.96 \ ATOM 136 ND2 ASN A 18 -1.869 -5.604 -26.191 1.00 -0.96 \ ATOM 137 N TYR A 19 -2.715 -11.007 -24.769 1.00 1.17 \ ATOM 138 CA TYR A 19 -2.178 -12.402 -24.665 1.00 1.17 \ ATOM 139 C TYR A 19 -3.246 -13.424 -24.364 1.00 1.17 \ ATOM 140 O TYR A 19 -2.936 -14.643 -24.219 1.00 1.17 \ ATOM 141 CB TYR A 19 -1.073 -12.426 -23.654 1.00 1.17 \ ATOM 142 CG TYR A 19 0.081 -11.558 -24.076 1.00 1.17 \ ATOM 143 CD1 TYR A 19 0.963 -11.991 -25.071 1.00 1.17 \ ATOM 144 CD2 TYR A 19 0.168 -10.255 -23.630 1.00 1.17 \ ATOM 145 CE1 TYR A 19 1.950 -11.177 -25.556 1.00 1.17 \ ATOM 146 CE2 TYR A 19 1.134 -9.416 -24.126 1.00 1.17 \ ATOM 147 CZ TYR A 19 2.047 -9.888 -25.074 1.00 1.17 \ ATOM 148 OH TYR A 19 3.007 -9.058 -25.564 1.00 1.17 \ ATOM 149 N CYS A 20 -4.522 -13.068 -24.347 1.00 1.70 \ ATOM 150 CA CYS A 20 -5.625 -13.988 -24.295 1.00 1.70 \ ATOM 151 C CYS A 20 -5.852 -14.640 -25.642 1.00 1.70 \ ATOM 152 O CYS A 20 -5.535 -14.015 -26.698 1.00 1.70 \ ATOM 153 CB CYS A 20 -6.916 -13.283 -23.809 1.00 1.70 \ ATOM 154 SG CYS A 20 -6.869 -12.618 -22.166 1.00 1.70 \ ATOM 155 N ASN A 21 -6.226 -15.903 -25.662 1.00 0.17 \ ATOM 156 CA ASN A 21 -6.557 -16.551 -26.957 1.00 0.17 \ ATOM 157 C ASN A 21 -7.966 -16.022 -27.465 1.00 0.17 \ ATOM 158 O ASN A 21 -8.764 -15.315 -26.778 1.00 0.17 \ ATOM 159 CB ASN A 21 -6.567 -18.101 -26.866 1.00 0.17 \ ATOM 160 CG ASN A 21 -5.257 -18.717 -26.443 1.00 0.17 \ ATOM 161 OD1 ASN A 21 -5.228 -19.634 -25.584 1.00 0.17 \ ATOM 162 ND2 ASN A 21 -4.175 -18.263 -27.018 1.00 0.17 \ ATOM 163 OXT ASN A 21 -8.343 -16.268 -28.624 1.00 0.17 \ """, "e4cxnA1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e4cxnA1_csv", state=0, origin=1) cmd.zoom("e4cxnA1_csv", animate=-1)