cmd.read_pdbstr("""\ ATOM 1 N PHE B 1 -5.439 -5.786 -9.273 1.00 -1.00 \ ATOM 2 CA PHE B 1 -4.291 -6.679 -9.323 1.00 -1.00 \ ATOM 3 C PHE B 1 -3.520 -6.484 -10.629 1.00 -1.00 \ ATOM 4 O PHE B 1 -2.358 -6.990 -10.693 1.00 -1.00 \ ATOM 5 CB PHE B 1 -4.669 -8.201 -9.104 1.00 -1.00 \ ATOM 6 CG PHE B 1 -5.653 -8.753 -10.114 1.00 -1.00 \ ATOM 7 CD1 PHE B 1 -7.017 -8.455 -10.038 1.00 -1.00 \ ATOM 8 CD2 PHE B 1 -5.210 -9.562 -11.192 1.00 -1.00 \ ATOM 9 CE1 PHE B 1 -7.911 -8.928 -11.012 1.00 -1.00 \ ATOM 10 CE2 PHE B 1 -6.134 -10.048 -12.144 1.00 -1.00 \ ATOM 11 CZ PHE B 1 -7.471 -9.725 -12.053 1.00 -1.00 \ ATOM 12 N VAL B 2 -4.093 -5.815 -11.647 1.00 -1.00 \ ATOM 13 CA VAL B 2 -3.351 -5.753 -12.955 1.00 -1.00 \ ATOM 14 C VAL B 2 -2.413 -4.582 -13.185 1.00 -1.00 \ ATOM 15 O VAL B 2 -1.516 -4.629 -14.075 1.00 -1.00 \ ATOM 16 CB VAL B 2 -4.278 -5.929 -14.175 1.00 -1.00 \ ATOM 17 CG1 VAL B 2 -5.038 -7.249 -14.053 1.00 -1.00 \ ATOM 18 CG2 VAL B 2 -5.255 -4.809 -14.347 1.00 -1.00 \ ATOM 19 N ASN B 3 -2.663 -3.490 -12.427 1.00 -0.47 \ ATOM 20 CA ASN B 3 -1.951 -2.249 -12.671 1.00 -0.47 \ ATOM 21 C ASN B 3 -0.750 -2.087 -11.797 1.00 -0.47 \ ATOM 22 O ASN B 3 -0.657 -1.193 -10.916 1.00 -0.47 \ ATOM 23 CB ASN B 3 -2.960 -1.106 -12.548 1.00 -0.47 \ ATOM 24 CG ASN B 3 -4.082 -1.277 -13.446 1.00 -0.47 \ ATOM 25 OD1 ASN B 3 -5.246 -1.560 -12.982 1.00 -0.47 \ ATOM 26 ND2 ASN B 3 -3.838 -1.187 -14.656 1.00 -0.47 \ ATOM 27 N GLN B 4 0.168 -3.053 -11.912 1.00 0.22 \ ATOM 28 CA GLN B 4 1.381 -3.055 -11.158 1.00 0.22 \ ATOM 29 C GLN B 4 2.408 -3.865 -11.957 1.00 0.22 \ ATOM 30 O GLN B 4 2.148 -4.361 -13.099 1.00 0.22 \ ATOM 31 CB GLN B 4 1.112 -3.644 -9.810 1.00 0.22 \ ATOM 32 CG GLN B 4 0.690 -5.117 -9.918 1.00 0.22 \ ATOM 33 CD GLN B 4 0.281 -5.729 -8.541 1.00 0.22 \ ATOM 34 OE1 GLN B 4 1.086 -5.801 -7.596 1.00 0.22 \ ATOM 35 NE2 GLN B 4 -0.934 -6.219 -8.448 1.00 0.22 \ ATOM 36 N HIS B 5 3.638 -3.905 -11.395 1.00 -0.04 \ ATOM 37 CA HIS B 5 4.705 -4.703 -12.012 1.00 -0.04 \ ATOM 38 C HIS B 5 4.428 -6.186 -11.662 1.00 -0.04 \ ATOM 39 O HIS B 5 4.246 -6.518 -10.453 1.00 -0.04 \ ATOM 40 CB HIS B 5 6.059 -4.386 -11.485 1.00 -0.04 \ ATOM 41 CG HIS B 5 6.513 -3.023 -11.788 1.00 -0.04 \ ATOM 42 ND1 HIS B 5 7.096 -2.675 -12.989 1.00 -0.04 \ ATOM 43 CD2 HIS B 5 6.446 -1.902 -11.037 1.00 -0.04 \ ATOM 44 CE1 HIS B 5 7.352 -1.372 -12.963 1.00 -0.04 \ ATOM 45 NE2 HIS B 5 6.995 -0.899 -11.782 1.00 -0.04 \ ATOM 46 N LEU B 6 4.375 -7.026 -12.669 1.00 1.15 \ ATOM 47 CA LEU B 6 3.985 -8.437 -12.498 1.00 1.15 \ ATOM 48 C LEU B 6 5.049 -9.255 -13.176 1.00 1.15 \ ATOM 49 O LEU B 6 5.198 -9.110 -14.412 1.00 1.15 \ ATOM 50 CB LEU B 6 2.652 -8.694 -13.198 1.00 1.15 \ ATOM 51 CG LEU B 6 1.403 -8.105 -12.503 1.00 1.15 \ ATOM 52 CD1 LEU B 6 0.182 -8.259 -13.405 1.00 1.15 \ ATOM 53 CD2 LEU B 6 1.224 -8.583 -11.066 1.00 1.15 \ ATOM 54 N CYS B 7 5.722 -10.118 -12.401 1.00 1.70 \ ATOM 55 CA CYS B 7 6.786 -10.872 -12.984 1.00 1.70 \ ATOM 56 C CYS B 7 6.591 -12.363 -12.788 1.00 1.70 \ ATOM 57 O CYS B 7 6.072 -12.723 -11.756 1.00 1.70 \ ATOM 58 CB CYS B 7 8.074 -10.400 -12.393 1.00 1.70 \ ATOM 59 SG CYS B 7 8.426 -8.610 -12.766 1.00 1.70 \ ATOM 66 N SER B 9 5.832 -16.041 -12.024 1.00 -0.48 \ ATOM 67 CA SER B 9 4.528 -16.706 -11.748 1.00 -0.48 \ ATOM 68 C SER B 9 3.426 -15.716 -11.431 1.00 -0.48 \ ATOM 69 O SER B 9 2.233 -15.965 -11.612 1.00 -0.48 \ ATOM 70 CB SER B 9 4.602 -17.793 -10.671 1.00 -0.48 \ ATOM 71 OG SER B 9 4.829 -17.206 -9.431 1.00 -0.48 \ ATOM 72 N HIS B 10 3.775 -14.521 -10.926 1.00 -0.23 \ ATOM 73 CA HIS B 10 2.793 -13.492 -10.644 1.00 -0.23 \ ATOM 74 C HIS B 10 2.102 -12.932 -11.882 1.00 -0.23 \ ATOM 75 O HIS B 10 0.875 -12.676 -11.890 1.00 -0.23 \ ATOM 76 CB HIS B 10 3.467 -12.370 -9.813 1.00 -0.23 \ ATOM 77 CG HIS B 10 4.100 -12.852 -8.511 1.00 -0.23 \ ATOM 78 ND1 HIS B 10 4.546 -11.977 -7.547 1.00 -0.23 \ ATOM 79 CD2 HIS B 10 4.338 -14.095 -8.012 1.00 -0.23 \ ATOM 80 CE1 HIS B 10 5.036 -12.645 -6.532 1.00 -0.23 \ ATOM 81 NE2 HIS B 10 4.935 -13.945 -6.782 1.00 -0.23 \ ATOM 82 N LEU B 11 2.850 -12.819 -12.938 1.00 1.70 \ ATOM 83 CA LEU B 11 2.348 -12.521 -14.288 1.00 1.70 \ ATOM 84 C LEU B 11 1.462 -13.530 -14.878 1.00 1.70 \ ATOM 85 O LEU B 11 0.347 -13.327 -15.419 1.00 1.70 \ ATOM 86 CB LEU B 11 3.508 -12.135 -15.185 1.00 1.70 \ ATOM 87 CG LEU B 11 3.183 -11.758 -16.641 1.00 1.70 \ ATOM 88 CD1 LEU B 11 2.171 -10.560 -16.671 1.00 1.70 \ ATOM 89 CD2 LEU B 11 4.497 -11.411 -17.317 1.00 1.70 \ ATOM 90 N VAL B 12 1.938 -14.812 -14.759 1.00 0.73 \ ATOM 91 CA VAL B 12 1.144 -15.873 -15.188 1.00 0.73 \ ATOM 92 C VAL B 12 -0.219 -15.939 -14.503 1.00 0.73 \ ATOM 93 O VAL B 12 -1.258 -16.236 -15.071 1.00 0.73 \ ATOM 94 CB VAL B 12 1.932 -17.240 -15.062 1.00 0.73 \ ATOM 95 CG1 VAL B 12 1.064 -18.427 -15.336 1.00 0.73 \ ATOM 96 CG2 VAL B 12 3.140 -17.207 -15.986 1.00 0.73 \ ATOM 97 N GLU B 13 -0.209 -15.707 -13.154 1.00 0.65 \ ATOM 98 CA GLU B 13 -1.452 -15.709 -12.388 1.00 0.65 \ ATOM 99 C GLU B 13 -2.432 -14.664 -12.915 1.00 0.65 \ ATOM 100 O GLU B 13 -3.619 -14.981 -13.042 1.00 0.65 \ ATOM 101 CB GLU B 13 -1.122 -15.433 -10.948 1.00 0.65 \ ATOM 102 CG GLU B 13 -2.342 -15.275 -10.066 1.00 0.65 \ ATOM 103 CD GLU B 13 -1.966 -15.325 -8.568 1.00 0.65 \ ATOM 104 OE1 GLU B 13 -1.443 -16.402 -8.120 1.00 0.65 \ ATOM 105 OE2 GLU B 13 -2.110 -14.256 -7.910 1.00 0.65 \ ATOM 106 N ALA B 14 -1.882 -13.489 -13.198 1.00 0.00 \ ATOM 107 CA ALA B 14 -2.773 -12.415 -13.748 1.00 0.00 \ ATOM 108 C ALA B 14 -3.356 -12.755 -15.060 1.00 0.00 \ ATOM 109 O ALA B 14 -4.571 -12.597 -15.272 1.00 0.00 \ ATOM 110 CB ALA B 14 -1.955 -11.153 -13.826 1.00 0.00 \ ATOM 111 N LEU B 15 -2.613 -13.388 -15.982 1.00 1.70 \ ATOM 112 CA LEU B 15 -3.110 -13.853 -17.225 1.00 1.70 \ ATOM 113 C LEU B 15 -4.158 -14.859 -17.081 1.00 1.70 \ ATOM 114 O LEU B 15 -5.219 -14.833 -17.716 1.00 1.70 \ ATOM 115 CB LEU B 15 -1.950 -14.452 -18.059 1.00 1.70 \ ATOM 116 CG LEU B 15 -1.077 -13.508 -18.758 1.00 1.70 \ ATOM 117 CD1 LEU B 15 0.143 -14.206 -19.322 1.00 1.70 \ ATOM 118 CD2 LEU B 15 -1.862 -12.831 -19.922 1.00 1.70 \ ATOM 119 N TYR B 16 -3.958 -15.818 -16.138 1.00 -0.22 \ ATOM 120 CA TYR B 16 -4.931 -16.820 -15.874 1.00 -0.22 \ ATOM 121 C TYR B 16 -6.267 -16.226 -15.387 1.00 -0.22 \ ATOM 122 O TYR B 16 -7.330 -16.649 -15.917 1.00 -0.22 \ ATOM 123 CB TYR B 16 -4.364 -17.767 -14.843 1.00 -0.22 \ ATOM 124 CG TYR B 16 -5.392 -18.768 -14.303 1.00 -0.22 \ ATOM 125 CD1 TYR B 16 -5.807 -19.886 -15.059 1.00 -0.22 \ ATOM 126 CD2 TYR B 16 -5.963 -18.603 -13.030 1.00 -0.22 \ ATOM 127 CE1 TYR B 16 -6.782 -20.730 -14.569 1.00 -0.22 \ ATOM 128 CE2 TYR B 16 -6.926 -19.466 -12.557 1.00 -0.22 \ ATOM 129 CZ TYR B 16 -7.271 -20.556 -13.311 1.00 -0.22 \ ATOM 130 OH TYR B 16 -8.239 -21.409 -12.811 1.00 -0.22 \ ATOM 131 N LEU B 17 -6.180 -15.257 -14.460 1.00 -0.23 \ ATOM 132 CA LEU B 17 -7.393 -14.617 -13.923 1.00 -0.23 \ ATOM 133 C LEU B 17 -8.082 -13.747 -14.959 1.00 -0.23 \ ATOM 134 O LEU B 17 -9.361 -13.833 -15.030 1.00 -0.23 \ ATOM 135 CB LEU B 17 -7.046 -13.853 -12.706 1.00 -0.23 \ ATOM 136 CG LEU B 17 -6.678 -14.662 -11.440 1.00 -0.23 \ ATOM 137 CD1 LEU B 17 -6.169 -13.750 -10.351 1.00 -0.23 \ ATOM 138 CD2 LEU B 17 -7.827 -15.596 -10.986 1.00 -0.23 \ ATOM 139 N VAL B 18 -7.341 -13.013 -15.700 1.00 0.28 \ ATOM 140 CA VAL B 18 -7.958 -12.140 -16.721 1.00 0.28 \ ATOM 141 C VAL B 18 -8.565 -12.888 -17.869 1.00 0.28 \ ATOM 142 O VAL B 18 -9.711 -12.585 -18.300 1.00 0.28 \ ATOM 143 CB VAL B 18 -6.962 -11.119 -17.188 1.00 0.28 \ ATOM 144 CG1 VAL B 18 -7.391 -10.433 -18.499 1.00 0.28 \ ATOM 145 CG2 VAL B 18 -6.697 -10.108 -16.087 1.00 0.28 \ ATOM 146 N CYS B 19 -7.868 -13.909 -18.391 1.00 1.70 \ ATOM 147 CA CYS B 19 -8.242 -14.568 -19.639 1.00 1.70 \ ATOM 148 C CYS B 19 -9.344 -15.573 -19.492 1.00 1.70 \ ATOM 149 O CYS B 19 -10.095 -15.775 -20.444 1.00 1.70 \ ATOM 150 CB CYS B 19 -7.016 -15.130 -20.340 1.00 1.70 \ ATOM 151 SG CYS B 19 -5.811 -13.817 -20.838 1.00 1.70 \ ATOM 152 N GLY B 20 -9.454 -16.118 -18.303 1.00 -0.15 \ ATOM 153 CA GLY B 20 -10.517 -17.076 -17.936 1.00 -0.15 \ ATOM 154 C GLY B 20 -10.523 -18.233 -18.936 1.00 -0.15 \ ATOM 155 O GLY B 20 -9.487 -18.749 -19.327 1.00 -0.15 \ ATOM 156 N GLU B 21 -11.706 -18.584 -19.440 1.00 0.18 \ ATOM 157 CA GLU B 21 -11.786 -19.750 -20.345 1.00 0.18 \ ATOM 158 C GLU B 21 -11.278 -19.487 -21.741 1.00 0.18 \ ATOM 159 O GLU B 21 -11.181 -20.447 -22.574 1.00 0.18 \ ATOM 160 CB GLU B 21 -13.241 -20.227 -20.361 1.00 0.18 \ ATOM 161 CG GLU B 21 -14.205 -19.314 -21.089 1.00 0.18 \ ATOM 162 CD GLU B 21 -15.705 -19.677 -20.800 1.00 0.18 \ ATOM 163 OE1 GLU B 21 -16.053 -20.867 -20.392 1.00 0.18 \ ATOM 164 OE2 GLU B 21 -16.546 -18.730 -20.940 1.00 0.18 \ ATOM 165 N ARG B 22 -10.896 -18.248 -22.074 1.00 -0.60 \ ATOM 166 CA ARG B 22 -10.277 -18.026 -23.333 1.00 -0.60 \ ATOM 167 C ARG B 22 -8.906 -18.743 -23.344 1.00 -0.60 \ ATOM 168 O ARG B 22 -8.377 -19.031 -24.446 1.00 -0.60 \ ATOM 169 CB ARG B 22 -10.007 -16.533 -23.646 1.00 -0.60 \ ATOM 170 CG ARG B 22 -11.283 -15.712 -23.842 1.00 -0.60 \ ATOM 171 CD ARG B 22 -10.943 -14.216 -23.951 1.00 -0.60 \ ATOM 172 NE ARG B 22 -10.832 -13.635 -22.611 1.00 -0.60 \ ATOM 173 CZ ARG B 22 -10.710 -12.318 -22.352 1.00 -0.60 \ ATOM 174 NH1 ARG B 22 -10.604 -11.474 -23.360 1.00 -0.60 \ ATOM 175 NH2 ARG B 22 -10.624 -11.849 -21.101 1.00 -0.60 \ ATOM 176 N GLY B 23 -8.314 -18.919 -22.183 1.00 1.70 \ ATOM 177 CA GLY B 23 -6.880 -19.282 -22.110 1.00 1.70 \ ATOM 178 C GLY B 23 -5.964 -18.162 -22.604 1.00 1.70 \ ATOM 179 O GLY B 23 -6.376 -17.038 -22.970 1.00 1.70 \ ATOM 180 N PHE B 24 -4.691 -18.442 -22.695 1.00 1.14 \ ATOM 181 CA PHE B 24 -3.705 -17.439 -22.954 1.00 1.14 \ ATOM 182 C PHE B 24 -2.411 -18.103 -23.440 1.00 1.14 \ ATOM 183 O PHE B 24 -2.257 -19.352 -23.411 1.00 1.14 \ ATOM 184 CB PHE B 24 -3.398 -16.582 -21.699 1.00 1.14 \ ATOM 185 CG PHE B 24 -2.856 -17.328 -20.508 1.00 1.14 \ ATOM 186 CD1 PHE B 24 -1.492 -17.552 -20.383 1.00 1.14 \ ATOM 187 CD2 PHE B 24 -3.701 -17.819 -19.569 1.00 1.14 \ ATOM 188 CE1 PHE B 24 -0.950 -18.286 -19.312 1.00 1.14 \ ATOM 189 CE2 PHE B 24 -3.201 -18.621 -18.553 1.00 1.14 \ ATOM 190 CZ PHE B 24 -1.838 -18.800 -18.408 1.00 1.14 \ ATOM 191 N PHE B 25 -1.539 -17.298 -23.967 1.00 0.51 \ ATOM 192 CA PHE B 25 -0.167 -17.663 -24.267 1.00 0.51 \ ATOM 193 C PHE B 25 0.822 -16.846 -23.476 1.00 0.51 \ ATOM 194 O PHE B 25 0.712 -15.622 -23.316 1.00 0.51 \ ATOM 195 CB PHE B 25 0.079 -17.755 -25.779 1.00 0.51 \ ATOM 196 CG PHE B 25 -0.148 -16.505 -26.493 1.00 0.51 \ ATOM 197 CD1 PHE B 25 -1.452 -16.191 -26.911 1.00 0.51 \ ATOM 198 CD2 PHE B 25 0.925 -15.667 -26.782 1.00 0.51 \ ATOM 199 CE1 PHE B 25 -1.703 -15.011 -27.582 1.00 0.51 \ ATOM 200 CE2 PHE B 25 0.674 -14.471 -27.456 1.00 0.51 \ ATOM 201 CZ PHE B 25 -0.627 -14.171 -27.826 1.00 0.51 \ ATOM 202 N TYR B 26 1.877 -17.479 -22.979 1.00 -0.24 \ ATOM 203 CA TYR B 26 2.866 -16.876 -22.120 1.00 -0.24 \ ATOM 204 C TYR B 26 4.211 -17.077 -22.797 1.00 -0.24 \ ATOM 205 O TYR B 26 4.743 -18.226 -22.894 1.00 -0.24 \ ATOM 206 CB TYR B 26 2.885 -17.488 -20.740 1.00 -0.24 \ ATOM 207 CG TYR B 26 3.931 -16.927 -19.857 1.00 -0.24 \ ATOM 208 CD1 TYR B 26 3.964 -15.561 -19.562 1.00 -0.24 \ ATOM 209 CD2 TYR B 26 4.919 -17.713 -19.289 1.00 -0.24 \ ATOM 210 CE1 TYR B 26 4.943 -15.023 -18.760 1.00 -0.24 \ ATOM 211 CE2 TYR B 26 5.877 -17.138 -18.449 1.00 -0.24 \ ATOM 212 CZ TYR B 26 5.885 -15.802 -18.244 1.00 -0.24 \ ATOM 213 OH TYR B 26 6.809 -15.185 -17.436 1.00 -0.24 \ ATOM 214 N THR B 27 4.770 -15.990 -23.323 0.50 -0.98 \ ATOM 215 CA THR B 27 6.057 -16.025 -24.055 0.50 -0.98 \ ATOM 216 C THR B 27 7.026 -15.009 -23.529 0.50 -0.98 \ ATOM 217 O THR B 27 7.091 -13.908 -24.062 0.50 -0.98 \ ATOM 218 CB THR B 27 5.836 -15.679 -25.505 0.50 -0.98 \ ATOM 219 OG1 THR B 27 4.741 -16.457 -26.010 0.50 -0.98 \ ATOM 220 CG2 THR B 27 7.161 -15.789 -26.301 0.50 -0.98 \ ATOM 221 N PRO B 28 7.723 -15.353 -22.468 1.00 -0.79 \ ATOM 222 CA PRO B 28 8.580 -14.474 -21.754 1.00 -0.79 \ ATOM 223 C PRO B 28 9.846 -14.065 -22.542 1.00 -0.79 \ ATOM 224 O PRO B 28 10.352 -12.971 -22.313 1.00 -0.79 \ ATOM 225 CB PRO B 28 8.954 -15.236 -20.531 1.00 -0.79 \ ATOM 226 CG PRO B 28 8.846 -16.671 -20.920 1.00 -0.79 \ ATOM 227 CD PRO B 28 7.670 -16.678 -21.797 1.00 -0.79 \ ATOM 228 N LYS B 29 10.240 -14.948 -23.459 1.00 -0.90 \ ATOM 229 CA LYS B 29 11.567 -14.918 -24.099 1.00 -0.90 \ ATOM 230 C LYS B 29 12.683 -14.554 -23.059 1.00 -0.90 \ ATOM 231 O LYS B 29 13.263 -15.418 -22.342 1.00 -0.90 \ ATOM 232 CB LYS B 29 11.587 -13.928 -25.230 1.00 -0.90 \ ATOM 233 CG LYS B 29 10.343 -13.832 -26.036 1.00 -0.90 \ ATOM 234 CD LYS B 29 10.145 -12.427 -26.605 1.00 -0.90 \ ATOM 235 CE LYS B 29 8.662 -11.993 -26.455 1.00 -0.90 \ ATOM 236 NZ LYS B 29 8.324 -11.017 -27.516 1.00 -0.90 \ """, "e4cxnB1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e4cxnB1_csv", state=0, origin=1) cmd.zoom("e4cxnB1_csv", animate=-1)