cmd.read_pdbstr("""\ ATOM 1 N MET A 1 -26.954 -41.683 -35.155 1.00 3.28 \ ATOM 2 CA MET A 1 -27.871 -41.434 -34.057 1.00 3.28 \ ATOM 3 C MET A 1 -27.834 -39.965 -33.740 1.00 3.28 \ ATOM 4 O MET A 1 -26.932 -39.246 -34.196 1.00 3.28 \ ATOM 5 CB MET A 1 -27.434 -42.265 -32.844 1.00 3.28 \ ATOM 6 CG MET A 1 -26.110 -41.835 -32.292 1.00 3.28 \ ATOM 7 SD MET A 1 -24.696 -42.590 -33.108 1.00 3.28 \ ATOM 8 CE MET A 1 -23.625 -42.148 -31.742 1.00 3.28 \ ATOM 9 N ILE A 2 -28.834 -39.532 -32.984 1.00 -0.91 \ ATOM 10 CA ILE A 2 -29.015 -38.152 -32.631 1.00 -0.91 \ ATOM 11 C ILE A 2 -28.493 -37.963 -31.183 1.00 -0.91 \ ATOM 12 O ILE A 2 -28.975 -38.618 -30.254 1.00 -0.91 \ ATOM 13 CB ILE A 2 -30.504 -37.763 -32.719 1.00 -0.91 \ ATOM 14 CG1 ILE A 2 -30.990 -37.917 -34.172 1.00 -0.91 \ ATOM 15 CG2 ILE A 2 -30.786 -36.347 -32.221 1.00 -0.91 \ ATOM 16 CD1 ILE A 2 -30.101 -37.236 -35.211 1.00 -0.91 \ ATOM 17 N ARG A 3 -27.593 -36.994 -31.016 1.00 -0.59 \ ATOM 18 CA ARG A 3 -26.987 -36.658 -29.717 1.00 -0.59 \ ATOM 19 C ARG A 3 -27.698 -35.520 -29.042 1.00 -0.59 \ ATOM 20 O ARG A 3 -28.185 -34.625 -29.723 1.00 -0.59 \ ATOM 21 CB ARG A 3 -25.527 -36.241 -29.904 1.00 -0.59 \ ATOM 22 CG ARG A 3 -24.671 -37.261 -30.535 1.00 -0.59 \ ATOM 23 CD ARG A 3 -24.140 -38.226 -29.531 1.00 -0.59 \ ATOM 24 NE ARG A 3 -23.034 -39.002 -30.065 1.00 -0.59 \ ATOM 25 CZ ARG A 3 -22.320 -39.908 -29.400 1.00 -0.59 \ ATOM 26 NH1 ARG A 3 -22.580 -40.220 -28.123 1.00 -0.59 \ ATOM 27 NH2 ARG A 3 -21.313 -40.491 -30.032 1.00 -0.59 \ ATOM 28 N THR A 4 -27.729 -35.565 -27.709 1.00 -1.26 \ ATOM 29 CA THR A 4 -28.163 -34.441 -26.909 1.00 -1.26 \ ATOM 30 C THR A 4 -26.927 -33.692 -26.362 1.00 -1.26 \ ATOM 31 O THR A 4 -26.133 -34.257 -25.598 1.00 -1.26 \ ATOM 32 CB THR A 4 -29.021 -34.845 -25.718 1.00 -1.26 \ ATOM 33 OG1 THR A 4 -30.158 -35.549 -26.195 1.00 -1.26 \ ATOM 34 CG2 THR A 4 -29.473 -33.617 -24.980 1.00 -1.26 \ ATOM 35 N MET A 5 -26.770 -32.442 -26.773 1.00 -0.13 \ ATOM 36 CA MET A 5 -25.566 -31.665 -26.493 1.00 -0.13 \ ATOM 37 C MET A 5 -25.892 -30.397 -25.710 1.00 -0.13 \ ATOM 38 O MET A 5 -26.920 -29.709 -25.983 1.00 -0.13 \ ATOM 39 CB MET A 5 -24.941 -31.294 -27.819 1.00 -0.13 \ ATOM 40 CG MET A 5 -24.576 -32.480 -28.723 1.00 -0.13 \ ATOM 41 SD MET A 5 -23.364 -33.621 -27.986 1.00 -0.13 \ ATOM 42 CE MET A 5 -21.863 -32.613 -27.959 1.00 -0.13 \ ATOM 43 N LEU A 6 -25.004 -30.019 -24.802 1.00 -0.06 \ ATOM 44 CA LEU A 6 -25.126 -28.734 -24.130 1.00 -0.06 \ ATOM 45 C LEU A 6 -25.120 -27.620 -25.168 1.00 -0.06 \ ATOM 46 O LEU A 6 -24.159 -27.508 -25.913 1.00 -0.06 \ ATOM 47 CB LEU A 6 -23.977 -28.551 -23.125 1.00 -0.06 \ ATOM 48 CG LEU A 6 -23.960 -27.201 -22.401 1.00 -0.06 \ ATOM 49 CD1 LEU A 6 -25.105 -27.116 -21.399 1.00 -0.06 \ ATOM 50 CD2 LEU A 6 -22.664 -27.082 -21.695 1.00 -0.06 \ ATOM 51 N GLN A 7 -26.185 -26.825 -25.246 1.00 -0.88 \ ATOM 52 CA GLN A 7 -26.244 -25.710 -26.163 1.00 -0.88 \ ATOM 53 C GLN A 7 -25.511 -24.490 -25.602 1.00 -0.88 \ ATOM 54 O GLN A 7 -24.754 -23.781 -26.292 1.00 -0.88 \ ATOM 55 CB GLN A 7 -27.707 -25.379 -26.419 1.00 -0.88 \ ATOM 56 CG GLN A 7 -28.014 -24.276 -27.428 1.00 -0.88 \ ATOM 57 CD GLN A 7 -27.629 -22.884 -26.994 1.00 -0.88 \ ATOM 58 OE1 GLN A 7 -26.919 -22.152 -27.723 1.00 -0.88 \ ATOM 59 NE2 GLN A 7 -28.086 -22.486 -25.823 1.00 -0.88 \ ATOM 60 N GLY A 8 -25.742 -24.242 -24.321 1.00 0.57 \ ATOM 61 CA GLY A 8 -25.095 -23.110 -23.663 1.00 0.57 \ ATOM 62 C GLY A 8 -25.560 -23.040 -22.244 1.00 0.57 \ ATOM 63 O GLY A 8 -26.531 -23.759 -21.858 1.00 0.57 \ ATOM 64 N LYS A 9 -24.859 -22.222 -21.464 1.00 2.10 \ ATOM 65 CA LYS A 9 -25.146 -22.066 -20.046 1.00 2.10 \ ATOM 66 C LYS A 9 -24.735 -20.729 -19.508 1.00 2.10 \ ATOM 67 O LYS A 9 -23.855 -20.041 -20.048 1.00 2.10 \ ATOM 68 CB LYS A 9 -24.462 -23.137 -19.213 1.00 2.10 \ ATOM 69 CG LYS A 9 -22.961 -23.195 -19.359 1.00 2.10 \ ATOM 70 CD LYS A 9 -22.368 -24.197 -18.376 1.00 2.10 \ ATOM 71 CE LYS A 9 -21.217 -23.629 -17.614 1.00 2.10 \ ATOM 72 NZ LYS A 9 -20.614 -24.577 -16.623 1.00 2.10 \ ATOM 73 N LEU A 10 -25.410 -20.371 -18.434 1.00 1.02 \ ATOM 74 CA LEU A 10 -25.063 -19.239 -17.606 1.00 1.02 \ ATOM 75 C LEU A 10 -24.342 -19.829 -16.403 1.00 1.02 \ ATOM 76 O LEU A 10 -24.943 -20.562 -15.629 1.00 1.02 \ ATOM 77 CB LEU A 10 -26.318 -18.448 -17.168 1.00 1.02 \ ATOM 78 CG LEU A 10 -27.261 -17.788 -18.203 1.00 1.02 \ ATOM 79 CD1 LEU A 10 -28.314 -16.947 -17.477 1.00 1.02 \ ATOM 80 CD2 LEU A 10 -26.480 -16.890 -19.154 1.00 1.02 \ ATOM 81 N HIS A 11 -23.086 -19.447 -16.213 1.00 0.25 \ ATOM 82 CA HIS A 11 -22.253 -20.056 -15.172 1.00 0.25 \ ATOM 83 C HIS A 11 -22.170 -19.183 -13.903 1.00 0.25 \ ATOM 84 O HIS A 11 -21.635 -18.059 -13.907 1.00 0.25 \ ATOM 85 CB HIS A 11 -20.871 -20.391 -15.722 1.00 0.25 \ ATOM 86 CG HIS A 11 -20.023 -21.132 -14.753 1.00 0.25 \ ATOM 87 ND1 HIS A 11 -20.178 -22.479 -14.510 1.00 0.25 \ ATOM 88 CD2 HIS A 11 -19.016 -20.708 -13.944 1.00 0.25 \ ATOM 89 CE1 HIS A 11 -19.287 -22.862 -13.609 1.00 0.25 \ ATOM 90 NE2 HIS A 11 -18.592 -21.800 -13.227 1.00 0.25 \ ATOM 91 N ARG A 12 -22.815 -19.686 -12.836 1.00 -0.87 \ ATOM 92 CA ARG A 12 -22.743 -19.083 -11.524 1.00 -0.87 \ ATOM 93 C ARG A 12 -23.343 -17.682 -11.564 1.00 -0.87 \ ATOM 94 O ARG A 12 -22.752 -16.675 -11.164 1.00 -0.87 \ ATOM 95 CB ARG A 12 -21.303 -19.100 -10.999 1.00 -0.87 \ ATOM 96 CG ARG A 12 -20.778 -20.511 -10.751 1.00 -0.87 \ ATOM 97 CD ARG A 12 -19.350 -20.585 -10.163 1.00 -0.87 \ ATOM 98 NE ARG A 12 -19.281 -19.724 -9.009 1.00 -0.87 \ ATOM 99 CZ ARG A 12 -19.444 -20.094 -7.729 1.00 -0.87 \ ATOM 100 NH1 ARG A 12 -19.616 -21.379 -7.370 1.00 -0.87 \ ATOM 101 NH2 ARG A 12 -19.377 -19.148 -6.797 1.00 -0.87 \ ATOM 102 N VAL A 13 -24.535 -17.625 -12.113 1.00 0.18 \ ATOM 103 CA VAL A 13 -25.369 -16.424 -12.023 1.00 0.18 \ ATOM 104 C VAL A 13 -26.124 -16.469 -10.677 1.00 0.18 \ ATOM 105 O VAL A 13 -26.332 -17.548 -10.094 1.00 0.18 \ ATOM 106 CB VAL A 13 -26.250 -16.333 -13.268 1.00 0.18 \ ATOM 107 CG1 VAL A 13 -27.474 -17.287 -13.196 1.00 0.18 \ ATOM 108 CG2 VAL A 13 -26.608 -14.935 -13.578 1.00 0.18 \ ATOM 109 N LYS A 14 -26.501 -15.310 -10.170 1.00 -0.84 \ ATOM 110 CA LYS A 14 -27.081 -15.199 -8.853 1.00 -0.84 \ ATOM 111 C LYS A 14 -28.583 -14.861 -8.945 1.00 -0.84 \ ATOM 112 O LYS A 14 -29.006 -13.968 -9.715 1.00 -0.84 \ ATOM 113 CB LYS A 14 -26.251 -14.168 -8.021 1.00 -0.84 \ ATOM 114 CG LYS A 14 -26.905 -13.569 -6.787 1.00 -0.84 \ ATOM 115 CD LYS A 14 -25.996 -12.594 -5.990 1.00 -0.84 \ ATOM 116 CE LYS A 14 -25.775 -11.211 -6.645 1.00 -0.84 \ ATOM 117 NZ LYS A 14 -26.974 -10.505 -7.261 1.00 -0.84 \ ATOM 118 N VAL A 15 -29.395 -15.606 -8.192 1.00 0.69 \ ATOM 119 CA VAL A 15 -30.845 -15.354 -8.196 1.00 0.69 \ ATOM 120 C VAL A 15 -31.127 -14.018 -7.541 1.00 0.69 \ ATOM 121 O VAL A 15 -30.612 -13.718 -6.492 1.00 0.69 \ ATOM 122 CB VAL A 15 -31.621 -16.458 -7.451 1.00 0.69 \ ATOM 123 CG1 VAL A 15 -33.095 -16.101 -7.283 1.00 0.69 \ ATOM 124 CG2 VAL A 15 -31.433 -17.814 -8.139 1.00 0.69 \ ATOM 125 N THR A 16 -31.953 -13.224 -8.193 1.00 0.43 \ ATOM 126 CA THR A 16 -32.310 -11.901 -7.696 1.00 0.43 \ ATOM 127 C THR A 16 -33.688 -11.823 -7.099 1.00 0.43 \ ATOM 128 O THR A 16 -33.957 -10.940 -6.330 1.00 0.43 \ ATOM 129 CB THR A 16 -32.153 -10.866 -8.827 1.00 0.43 \ ATOM 130 OG1 THR A 16 -33.050 -11.195 -9.893 1.00 0.43 \ ATOM 131 CG2 THR A 16 -30.693 -10.895 -9.350 1.00 0.43 \ ATOM 132 N HIS A 17 -34.579 -12.707 -7.509 1.00 -0.60 \ ATOM 133 CA HIS A 17 -35.994 -12.645 -7.094 1.00 -0.60 \ ATOM 134 C HIS A 17 -36.534 -14.054 -7.037 1.00 -0.60 \ ATOM 135 O HIS A 17 -36.111 -14.954 -7.792 1.00 -0.60 \ ATOM 136 CB HIS A 17 -36.855 -11.887 -8.091 1.00 -0.60 \ ATOM 137 CG HIS A 17 -36.462 -10.468 -8.267 1.00 -0.60 \ ATOM 138 ND1 HIS A 17 -35.367 -10.095 -9.019 1.00 -0.60 \ ATOM 139 CD2 HIS A 17 -37.005 -9.318 -7.775 1.00 -0.60 \ ATOM 140 CE1 HIS A 17 -35.250 -8.772 -8.993 1.00 -0.60 \ ATOM 141 NE2 HIS A 17 -36.223 -8.274 -8.229 1.00 -0.60 \ ATOM 142 N ALA A 18 -37.447 -14.241 -6.098 1.00 -0.25 \ ATOM 143 CA ALA A 18 -38.179 -15.484 -5.947 1.00 -0.25 \ ATOM 144 C ALA A 18 -39.637 -15.106 -5.664 1.00 -0.25 \ ATOM 145 O ALA A 18 -39.909 -14.257 -4.819 1.00 -0.25 \ ATOM 146 CB ALA A 18 -37.556 -16.342 -4.872 1.00 -0.25 \ ATOM 147 N ASP A 19 -40.563 -15.641 -6.456 1.00 -0.76 \ ATOM 148 CA ASP A 19 -41.928 -15.145 -6.470 1.00 -0.76 \ ATOM 149 C ASP A 19 -42.845 -16.377 -6.625 1.00 -0.76 \ ATOM 150 O ASP A 19 -43.262 -16.732 -7.704 1.00 -0.76 \ ATOM 151 CB ASP A 19 -42.093 -14.144 -7.643 1.00 -0.76 \ ATOM 152 CG ASP A 19 -43.440 -13.389 -7.631 1.00 -0.76 \ ATOM 153 OD1 ASP A 19 -44.052 -13.244 -6.547 1.00 -0.76 \ ATOM 154 OD2 ASP A 19 -43.896 -12.941 -8.720 1.00 -0.76 \ ATOM 155 N LEU A 20 -43.170 -16.993 -5.504 1.00 -0.05 \ ATOM 156 CA LEU A 20 -44.050 -18.158 -5.470 1.00 -0.05 \ ATOM 157 C LEU A 20 -45.422 -17.955 -6.138 1.00 -0.05 \ ATOM 158 O LEU A 20 -45.957 -18.851 -6.777 1.00 -0.05 \ ATOM 159 CB LEU A 20 -44.234 -18.519 -4.002 1.00 -0.05 \ ATOM 160 CG LEU A 20 -44.634 -19.924 -3.567 1.00 -0.05 \ ATOM 161 CD1 LEU A 20 -43.803 -21.038 -4.207 1.00 -0.05 \ ATOM 162 CD2 LEU A 20 -44.498 -19.942 -2.047 1.00 -0.05 \ ATOM 163 N HIS A 21 -46.001 -16.769 -5.982 1.00 -0.72 \ ATOM 164 CA HIS A 21 -47.411 -16.589 -6.296 1.00 -0.72 \ ATOM 165 C HIS A 21 -47.621 -15.906 -7.649 1.00 -0.72 \ ATOM 166 O HIS A 21 -48.755 -15.927 -8.161 1.00 -0.72 \ ATOM 167 CB HIS A 21 -48.114 -15.811 -5.156 1.00 -0.72 \ ATOM 168 CG HIS A 21 -47.784 -16.327 -3.786 1.00 -0.72 \ ATOM 169 ND1 HIS A 21 -48.243 -17.540 -3.314 1.00 -0.72 \ ATOM 170 CD2 HIS A 21 -47.005 -15.810 -2.801 1.00 -0.72 \ ATOM 171 CE1 HIS A 21 -47.780 -17.736 -2.090 1.00 -0.72 \ ATOM 172 NE2 HIS A 21 -47.025 -16.703 -1.756 1.00 -0.72 \ ATOM 173 N TYR A 22 -46.547 -15.305 -8.196 1.00 1.95 \ ATOM 174 CA TYR A 22 -46.530 -14.727 -9.557 1.00 1.95 \ ATOM 175 C TYR A 22 -45.219 -15.097 -10.261 1.00 1.95 \ ATOM 176 O TYR A 22 -44.449 -14.224 -10.695 1.00 1.95 \ ATOM 177 CB TYR A 22 -46.747 -13.191 -9.557 1.00 1.95 \ """, "e4d7zA1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e4d7zA1_csv", state=0, origin=1) cmd.zoom("e4d7zA1_csv", animate=-1)