cmd.read_pdbstr("""\ ATOM 1 N PHE D 1 10.105 -19.225 -6.801 1.00 -1.00 \ ATOM 2 CA PHE D 1 9.286 -18.028 -6.465 1.00 -1.00 \ ATOM 3 C PHE D 1 9.346 -17.739 -4.973 1.00 -1.00 \ ATOM 4 O PHE D 1 9.406 -18.658 -4.157 1.00 -1.00 \ ATOM 5 CB PHE D 1 7.828 -18.246 -6.878 1.00 -1.00 \ ATOM 6 CG PHE D 1 7.648 -18.533 -8.340 1.00 -1.00 \ ATOM 7 CD1 PHE D 1 8.124 -17.651 -9.296 1.00 -1.00 \ ATOM 8 CD2 PHE D 1 6.993 -19.679 -8.762 1.00 -1.00 \ ATOM 9 CE1 PHE D 1 7.959 -17.912 -10.645 1.00 -1.00 \ ATOM 10 CE2 PHE D 1 6.820 -19.947 -10.109 1.00 -1.00 \ ATOM 11 CZ PHE D 1 7.305 -19.061 -11.054 1.00 -1.00 \ ATOM 12 N VAL D 2 9.325 -16.456 -4.624 1.00 -1.00 \ ATOM 13 CA VAL D 2 9.260 -16.032 -3.226 1.00 -1.00 \ ATOM 14 C VAL D 2 7.808 -16.002 -2.755 1.00 -1.00 \ ATOM 15 O VAL D 2 6.886 -15.866 -3.566 1.00 -1.00 \ ATOM 16 CB VAL D 2 9.882 -14.632 -3.027 1.00 -1.00 \ ATOM 17 CG1 VAL D 2 11.336 -14.626 -3.479 1.00 -1.00 \ ATOM 18 CG2 VAL D 2 9.079 -13.568 -3.767 1.00 -1.00 \ ATOM 19 N ASN D 3 7.613 -16.128 -1.444 1.00 -0.48 \ ATOM 20 CA ASN D 3 6.286 -15.989 -0.845 1.00 -0.48 \ ATOM 21 C ASN D 3 5.774 -14.558 -0.995 1.00 -0.48 \ ATOM 22 O ASN D 3 6.562 -13.610 -1.075 1.00 -0.48 \ ATOM 23 CB ASN D 3 6.307 -16.387 0.634 1.00 -0.48 \ ATOM 24 CG ASN D 3 6.618 -17.858 0.842 1.00 -0.48 \ ATOM 25 OD1 ASN D 3 7.433 -18.219 1.694 1.00 -0.48 \ ATOM 26 ND2 ASN D 3 5.971 -18.716 0.061 1.00 -0.48 \ ATOM 27 N GLN D 4 4.453 -14.414 -1.026 1.00 0.23 \ ATOM 28 CA GLN D 4 3.816 -13.149 -1.379 1.00 0.23 \ ATOM 29 C GLN D 4 3.059 -12.539 -0.211 1.00 0.23 \ ATOM 30 O GLN D 4 2.313 -13.234 0.478 1.00 0.23 \ ATOM 31 CB GLN D 4 2.842 -13.365 -2.541 1.00 0.23 \ ATOM 32 CG GLN D 4 3.467 -13.993 -3.777 1.00 0.23 \ ATOM 33 CD GLN D 4 4.496 -13.092 -4.430 1.00 0.23 \ ATOM 34 OE1 GLN D 4 4.284 -11.889 -4.569 1.00 0.23 \ ATOM 35 NE2 GLN D 4 5.617 -13.672 -4.837 1.00 0.23 \ ATOM 36 N HIS D 5 3.265 -11.240 0.004 1.00 -0.03 \ ATOM 37 CA HIS D 5 2.446 -10.441 0.914 1.00 -0.03 \ ATOM 38 C HIS D 5 1.728 -9.397 0.100 1.00 -0.03 \ ATOM 39 O HIS D 5 2.324 -8.398 -0.307 1.00 -0.03 \ ATOM 40 CB HIS D 5 3.307 -9.803 1.996 1.00 -0.03 \ ATOM 41 CG HIS D 5 2.522 -8.988 2.997 1.00 -0.03 \ ATOM 42 ND1 HIS D 5 3.060 -7.954 3.668 1.00 -0.03 \ ATOM 43 CD2 HIS D 5 1.194 -9.081 3.415 1.00 -0.03 \ ATOM 44 CE1 HIS D 5 2.131 -7.418 4.483 1.00 -0.03 \ ATOM 45 NE2 HIS D 5 0.990 -8.109 4.327 1.00 -0.03 \ ATOM 46 N LEU D 6 0.438 -9.631 -0.146 1.00 1.17 \ ATOM 47 CA LEU D 6 -0.337 -8.865 -1.126 1.00 1.17 \ ATOM 48 C LEU D 6 -1.685 -8.431 -0.565 1.00 1.17 \ ATOM 49 O LEU D 6 -2.496 -9.274 -0.180 1.00 1.17 \ ATOM 50 CB LEU D 6 -0.583 -9.718 -2.374 1.00 1.17 \ ATOM 51 CG LEU D 6 0.632 -10.194 -3.172 1.00 1.17 \ ATOM 52 CD1 LEU D 6 0.254 -11.370 -4.065 1.00 1.17 \ ATOM 53 CD2 LEU D 6 1.223 -9.058 -3.993 1.00 1.17 \ ATOM 54 N CYS D 7 -1.928 -7.121 -0.536 1.00 1.69 \ ATOM 55 CA CYS D 7 -3.209 -6.571 -0.084 1.00 1.69 \ ATOM 56 C CYS D 7 -3.903 -5.753 -1.170 1.00 1.69 \ ATOM 57 O CYS D 7 -3.253 -5.162 -2.034 1.00 1.69 \ ATOM 58 CB CYS D 7 -3.006 -5.692 1.148 1.00 1.69 \ ATOM 59 SG CYS D 7 -2.335 -6.574 2.572 1.00 1.69 \ ATOM 60 N GLY D 8 -5.231 -5.719 -1.105 1.00 0.76 \ ATOM 61 CA GLY D 8 -6.037 -4.909 -2.009 1.00 0.76 \ ATOM 62 C GLY D 8 -5.737 -5.148 -3.475 1.00 0.76 \ ATOM 63 O GLY D 8 -5.695 -6.291 -3.927 1.00 0.76 \ ATOM 64 N SER D 9 -5.503 -4.065 -4.211 1.00 -0.47 \ ATOM 65 CA SER D 9 -5.296 -4.143 -5.655 1.00 -0.47 \ ATOM 66 C SER D 9 -4.003 -4.859 -6.059 1.00 -0.47 \ ATOM 67 O SER D 9 -3.871 -5.293 -7.201 1.00 -0.47 \ ATOM 68 CB SER D 9 -5.321 -2.744 -6.275 1.00 -0.47 \ ATOM 69 OG SER D 9 -4.163 -2.007 -5.938 1.00 -0.47 \ ATOM 70 N HIS D 10 -3.054 -4.975 -5.133 1.00 -0.23 \ ATOM 71 CA HIS D 10 -1.802 -5.686 -5.410 1.00 -0.23 \ ATOM 72 C HIS D 10 -2.017 -7.166 -5.589 1.00 -0.23 \ ATOM 73 O HIS D 10 -1.315 -7.804 -6.371 1.00 -0.23 \ ATOM 74 CB HIS D 10 -0.764 -5.407 -4.325 1.00 -0.23 \ ATOM 75 CG HIS D 10 -0.367 -3.951 -4.232 1.00 -0.23 \ ATOM 76 ND1 HIS D 10 0.307 -3.324 -5.214 1.00 -0.23 \ ATOM 77 CD2 HIS D 10 -0.590 -2.999 -3.239 1.00 -0.23 \ ATOM 78 CE1 HIS D 10 0.506 -2.040 -4.873 1.00 -0.23 \ ATOM 79 NE2 HIS D 10 -0.034 -1.844 -3.658 1.00 -0.23 \ ATOM 80 N LEU D 11 -2.996 -7.732 -4.885 1.00 1.69 \ ATOM 81 CA LEU D 11 -3.356 -9.138 -5.088 1.00 1.69 \ ATOM 82 C LEU D 11 -3.969 -9.335 -6.475 1.00 1.69 \ ATOM 83 O LEU D 11 -3.627 -10.285 -7.182 1.00 1.69 \ ATOM 84 CB LEU D 11 -4.321 -9.614 -4.002 1.00 1.69 \ ATOM 85 CG LEU D 11 -4.908 -11.020 -4.162 1.00 1.69 \ ATOM 86 CD1 LEU D 11 -3.829 -12.064 -4.431 1.00 1.69 \ ATOM 87 CD2 LEU D 11 -5.709 -11.378 -2.923 1.00 1.69 \ ATOM 88 N VAL D 12 -4.866 -8.428 -6.856 1.00 0.76 \ ATOM 89 CA VAL D 12 -5.502 -8.453 -8.181 1.00 0.76 \ ATOM 90 C VAL D 12 -4.467 -8.366 -9.314 1.00 0.76 \ ATOM 91 O VAL D 12 -4.618 -9.028 -10.349 1.00 0.76 \ ATOM 92 CB VAL D 12 -6.547 -7.323 -8.320 1.00 0.76 \ ATOM 93 CG1 VAL D 12 -7.042 -7.213 -9.756 1.00 0.76 \ ATOM 94 CG2 VAL D 12 -7.713 -7.566 -7.372 1.00 0.76 \ ATOM 95 N GLU D 13 -3.432 -7.551 -9.112 0.50 0.64 \ ATOM 96 CA GLU D 13 -2.314 -7.456 -10.050 0.50 0.64 \ ATOM 97 C GLU D 13 -1.574 -8.783 -10.173 0.50 0.64 \ ATOM 98 O GLU D 13 -1.218 -9.200 -11.276 0.50 0.64 \ ATOM 99 CB GLU D 13 -1.331 -6.374 -9.600 0.50 0.64 \ ATOM 100 CG GLU D 13 -1.782 -4.955 -9.894 0.50 0.64 \ ATOM 101 CD GLU D 13 -1.720 -4.625 -11.371 0.50 0.64 \ ATOM 102 OE1 GLU D 13 -1.396 -5.532 -12.165 0.50 0.64 \ ATOM 103 OE2 GLU D 13 -2.000 -3.463 -11.735 0.50 0.64 \ ATOM 104 N ALA D 14 -1.340 -9.435 -9.036 1.00 0.02 \ ATOM 105 CA ALA D 14 -0.667 -10.737 -9.002 1.00 0.02 \ ATOM 106 C ALA D 14 -1.497 -11.821 -9.693 1.00 0.02 \ ATOM 107 O ALA D 14 -0.952 -12.674 -10.395 1.00 0.02 \ ATOM 108 CB ALA D 14 -0.370 -11.140 -7.563 1.00 0.02 \ ATOM 109 N LEU D 15 -2.811 -11.782 -9.485 1.00 1.69 \ ATOM 110 CA LEU D 15 -3.728 -12.713 -10.146 1.00 1.69 \ ATOM 111 C LEU D 15 -3.660 -12.585 -11.666 1.00 1.69 \ ATOM 112 O LEU D 15 -3.649 -13.592 -12.376 1.00 1.69 \ ATOM 113 CB LEU D 15 -5.165 -12.493 -9.668 1.00 1.69 \ ATOM 114 CG LEU D 15 -5.494 -13.089 -8.297 1.00 1.69 \ ATOM 115 CD1 LEU D 15 -6.834 -12.576 -7.787 1.00 1.69 \ ATOM 116 CD2 LEU D 15 -5.484 -14.609 -8.371 1.00 1.69 \ ATOM 117 N TYR D 16 -3.609 -11.349 -12.157 1.00 -0.21 \ ATOM 118 CA TYR D 16 -3.476 -11.101 -13.591 1.00 -0.21 \ ATOM 119 C TYR D 16 -2.150 -11.637 -14.141 1.00 -0.21 \ ATOM 120 O TYR D 16 -2.115 -12.206 -15.232 1.00 -0.21 \ ATOM 121 CB TYR D 16 -3.609 -9.609 -13.916 1.00 -0.21 \ ATOM 122 CG TYR D 16 -3.538 -9.336 -15.404 1.00 -0.21 \ ATOM 123 CD1 TYR D 16 -4.617 -9.632 -16.237 1.00 -0.21 \ ATOM 124 CD2 TYR D 16 -2.385 -8.813 -15.983 1.00 -0.21 \ ATOM 125 CE1 TYR D 16 -4.551 -9.401 -17.602 1.00 -0.21 \ ATOM 126 CE2 TYR D 16 -2.309 -8.581 -17.347 1.00 -0.21 \ ATOM 127 CZ TYR D 16 -3.394 -8.874 -18.151 1.00 -0.21 \ ATOM 128 OH TYR D 16 -3.323 -8.640 -19.505 1.00 -0.21 \ ATOM 129 N LEU D 17 -1.070 -11.454 -13.387 0.50 -0.24 \ ATOM 130 CA LEU D 17 0.245 -11.937 -13.800 0.50 -0.24 \ ATOM 131 C LEU D 17 0.294 -13.466 -13.862 0.50 -0.24 \ ATOM 132 O LEU D 17 0.871 -14.032 -14.791 0.50 -0.24 \ ATOM 133 CB LEU D 17 1.328 -11.407 -12.858 0.50 -0.24 \ ATOM 134 CG LEU D 17 1.420 -9.881 -12.766 0.50 -0.24 \ ATOM 135 CD1 LEU D 17 2.654 -9.459 -11.980 0.50 -0.24 \ ATOM 136 CD2 LEU D 17 1.432 -9.257 -14.153 0.50 -0.24 \ ATOM 137 N VAL D 18 -0.317 -14.123 -12.878 1.00 0.30 \ ATOM 138 CA VAL D 18 -0.352 -15.589 -12.820 1.00 0.30 \ ATOM 139 C VAL D 18 -1.293 -16.193 -13.864 1.00 0.30 \ ATOM 140 O VAL D 18 -0.927 -17.144 -14.552 1.00 0.30 \ ATOM 141 CB VAL D 18 -0.777 -16.083 -11.419 1.00 0.30 \ ATOM 142 CG1 VAL D 18 -0.993 -17.591 -11.417 1.00 0.30 \ ATOM 143 CG2 VAL D 18 0.263 -15.689 -10.383 1.00 0.30 \ ATOM 144 N CYS D 19 -2.497 -15.639 -13.982 1.00 1.69 \ ATOM 145 CA CYS D 19 -3.537 -16.219 -14.838 1.00 1.69 \ ATOM 146 C CYS D 19 -3.527 -15.651 -16.257 1.00 1.69 \ ATOM 147 O CYS D 19 -3.749 -16.384 -17.223 1.00 1.69 \ ATOM 148 CB CYS D 19 -4.915 -16.015 -14.208 1.00 1.69 \ ATOM 149 SG CYS D 19 -5.070 -16.667 -12.527 1.00 1.69 \ ATOM 150 N GLY D 20 -3.284 -14.348 -16.376 1.00 -0.12 \ ATOM 151 CA GLY D 20 -3.199 -13.695 -17.679 1.00 -0.12 \ ATOM 152 C GLY D 20 -4.545 -13.628 -18.373 1.00 -0.12 \ ATOM 153 O GLY D 20 -5.558 -13.315 -17.743 1.00 -0.12 \ ATOM 154 N GLU D 21 -4.553 -13.938 -19.669 1.00 0.18 \ ATOM 155 CA GLU D 21 -5.778 -13.906 -20.471 1.00 0.18 \ ATOM 156 C GLU D 21 -6.616 -15.196 -20.412 1.00 0.18 \ ATOM 157 O GLU D 21 -7.622 -15.307 -21.112 1.00 0.18 \ ATOM 158 CB GLU D 21 -5.457 -13.524 -21.921 1.00 0.18 \ ATOM 159 CG GLU D 21 -4.940 -12.100 -22.067 1.00 0.18 \ ATOM 160 CD GLU D 21 -5.987 -11.056 -21.720 1.00 0.18 \ ATOM 161 OE1 GLU D 21 -5.814 -10.345 -20.704 1.00 0.18 \ ATOM 162 OE2 GLU D 21 -6.992 -10.955 -22.458 1.00 0.18 \ ATOM 163 N ARG D 22 -6.184 -16.160 -19.597 0.50 -0.58 \ ATOM 164 CA ARG D 22 -7.040 -17.275 -19.197 0.50 -0.58 \ ATOM 165 C ARG D 22 -8.194 -16.722 -18.370 0.50 -0.58 \ ATOM 166 O ARG D 22 -9.340 -17.146 -18.519 0.50 -0.58 \ ATOM 167 CB ARG D 22 -6.263 -18.290 -18.354 0.50 -0.58 \ ATOM 168 CG ARG D 22 -5.052 -18.898 -19.039 0.50 -0.58 \ ATOM 169 CD ARG D 22 -4.514 -20.087 -18.251 0.50 -0.58 \ ATOM 170 NE ARG D 22 -3.724 -19.690 -17.086 0.50 -0.58 \ ATOM 171 CZ ARG D 22 -3.245 -20.545 -16.186 0.50 -0.58 \ ATOM 172 NH1 ARG D 22 -2.526 -20.106 -15.163 0.50 -0.58 \ ATOM 173 NH2 ARG D 22 -3.493 -21.843 -16.305 0.50 -0.58 \ ATOM 174 N GLY D 23 -7.869 -15.770 -17.497 1.00 1.69 \ ATOM 175 CA GLY D 23 -8.844 -15.114 -16.642 1.00 1.69 \ ATOM 176 C GLY D 23 -8.778 -15.649 -15.230 1.00 1.69 \ ATOM 177 O GLY D 23 -8.094 -16.639 -14.960 1.00 1.69 \ ATOM 178 N PHE D 24 -9.493 -14.992 -14.326 1.00 1.16 \ ATOM 179 CA PHE D 24 -9.513 -15.401 -12.929 1.00 1.16 \ ATOM 180 C PHE D 24 -10.737 -14.877 -12.198 1.00 1.16 \ ATOM 181 O PHE D 24 -11.416 -13.963 -12.672 1.00 1.16 \ ATOM 182 CB PHE D 24 -8.246 -14.915 -12.216 1.00 1.16 \ ATOM 183 CG PHE D 24 -8.085 -13.420 -12.202 1.00 1.16 \ ATOM 184 CD1 PHE D 24 -7.443 -12.767 -13.247 1.00 1.16 \ ATOM 185 CD2 PHE D 24 -8.559 -12.664 -11.137 1.00 1.16 \ ATOM 186 CE1 PHE D 24 -7.284 -11.392 -13.234 1.00 1.16 \ ATOM 187 CE2 PHE D 24 -8.404 -11.289 -11.119 1.00 1.16 \ ATOM 188 CZ PHE D 24 -7.764 -10.650 -12.167 1.00 1.16 \ ATOM 189 N PHE D 25 -10.997 -15.471 -11.035 1.00 0.51 \ ATOM 190 CA PHE D 25 -12.047 -15.020 -10.135 1.00 0.51 \ ATOM 191 C PHE D 25 -11.407 -14.437 -8.877 1.00 0.51 \ ATOM 192 O PHE D 25 -10.564 -15.081 -8.241 1.00 0.51 \ ATOM 193 CB PHE D 25 -12.981 -16.183 -9.775 1.00 0.51 \ ATOM 194 CG PHE D 25 -13.703 -16.768 -10.959 1.00 0.51 \ ATOM 195 CD1 PHE D 25 -13.094 -17.730 -11.757 1.00 0.51 \ ATOM 196 CD2 PHE D 25 -14.989 -16.356 -11.280 1.00 0.51 \ ATOM 197 CE1 PHE D 25 -13.756 -18.269 -12.850 1.00 0.51 \ ATOM 198 CE2 PHE D 25 -15.655 -16.890 -12.374 1.00 0.51 \ ATOM 199 CZ PHE D 25 -15.038 -17.848 -13.160 1.00 0.51 \ ATOM 200 N TYR D 26 -11.790 -13.204 -8.549 1.00 -0.23 \ ATOM 201 CA TYR D 26 -11.387 -12.551 -7.307 1.00 -0.23 \ ATOM 202 C TYR D 26 -12.521 -12.746 -6.305 1.00 -0.23 \ ATOM 203 O TYR D 26 -13.584 -12.141 -6.443 1.00 -0.23 \ ATOM 204 CB TYR D 26 -11.119 -11.064 -7.563 1.00 -0.23 \ ATOM 205 CG TYR D 26 -10.746 -10.259 -6.336 1.00 -0.23 \ ATOM 206 CD1 TYR D 26 -11.567 -9.229 -5.877 1.00 -0.23 \ ATOM 207 CD2 TYR D 26 -9.569 -10.517 -5.640 1.00 -0.23 \ ATOM 208 CE1 TYR D 26 -11.230 -8.487 -4.758 1.00 -0.23 \ ATOM 209 CE2 TYR D 26 -9.223 -9.780 -4.519 1.00 -0.23 \ ATOM 210 CZ TYR D 26 -10.056 -8.766 -4.082 1.00 -0.23 \ ATOM 211 OH TYR D 26 -9.718 -8.030 -2.968 1.00 -0.23 \ ATOM 212 N THR D 27 -12.294 -13.599 -5.306 1.00 -0.98 \ ATOM 213 CA THR D 27 -13.361 -14.049 -4.407 1.00 -0.98 \ ATOM 214 C THR D 27 -13.015 -13.831 -2.929 1.00 -0.98 \ ATOM 215 O THR D 27 -12.648 -14.779 -2.227 1.00 -0.98 \ ATOM 216 CB THR D 27 -13.675 -15.544 -4.628 1.00 -0.98 \ ATOM 217 OG1 THR D 27 -12.527 -16.335 -4.293 1.00 -0.98 \ ATOM 218 CG2 THR D 27 -14.067 -15.811 -6.081 1.00 -0.98 \ ATOM 219 N PRO D 28 -13.131 -12.579 -2.450 1.00 -0.78 \ ATOM 220 CA PRO D 28 -12.982 -12.299 -1.020 1.00 -0.78 \ ATOM 221 C PRO D 28 -14.255 -12.647 -0.248 1.00 -0.78 \ ATOM 222 O PRO D 28 -15.208 -13.162 -0.837 1.00 -0.78 \ ATOM 223 CB PRO D 28 -12.716 -10.792 -0.988 1.00 -0.78 \ ATOM 224 CG PRO D 28 -13.411 -10.266 -2.193 1.00 -0.78 \ ATOM 225 CD PRO D 28 -13.365 -11.351 -3.232 1.00 -0.78 \ ATOM 226 N LYS D 29 -14.268 -12.374 1.055 1.00 -0.90 \ ATOM 227 CA LYS D 29 -15.458 -12.606 1.879 1.00 -0.90 \ ATOM 228 C LYS D 29 -16.118 -11.285 2.293 1.00 -0.90 \ ATOM 229 O LYS D 29 -15.592 -10.207 2.008 1.00 -0.90 \ ATOM 230 CB LYS D 29 -15.110 -13.460 3.106 1.00 -0.90 \ ATOM 231 CG LYS D 29 -14.336 -12.749 4.206 1.00 -0.90 \ ATOM 232 CD LYS D 29 -13.989 -13.721 5.323 1.00 -0.90 \ ATOM 233 CE LYS D 29 -13.531 -13.000 6.578 1.00 -0.90 \ ATOM 234 NZ LYS D 29 -13.285 -13.945 7.702 1.00 -0.90 \ ATOM 235 N THR D 30 -17.271 -11.391 2.957 1.00 -1.45 \ ATOM 236 CA THR D 30 -18.078 -10.241 3.396 1.00 -1.45 \ ATOM 237 C THR D 30 -17.433 -8.877 3.137 1.00 -1.45 \ ATOM 238 O THR D 30 -17.851 -8.138 2.244 1.00 -1.45 \ ATOM 239 CB THR D 30 -18.412 -10.344 4.900 1.00 -1.45 \ ATOM 240 OG1 THR D 30 -19.008 -11.618 5.178 1.00 -1.45 \ ATOM 241 CG2 THR D 30 -19.371 -9.234 5.320 1.00 -1.45 \ """, "e4fg3D1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e4fg3D1_csv", state=0, origin=1) cmd.zoom("e4fg3D1_csv", animate=-1)