cmd.read_pdbstr("""\ ATOM 1 N ALA H 114 -93.952 20.147 30.292 1.00 -1.00 \ ATOM 2 CA ALA H 114 -95.290 20.724 30.257 1.00 -1.00 \ ATOM 3 C ALA H 114 -95.839 20.942 31.663 1.00 -1.00 \ ATOM 4 O ALA H 114 -95.147 20.696 32.652 1.00 -1.00 \ ATOM 5 CB ALA H 114 -96.218 19.827 29.460 1.00 -1.00 \ ATOM 6 N SER H 115 -97.067 21.450 31.736 1.00 -1.00 \ ATOM 7 CA SER H 115 -97.791 21.585 32.999 1.00 -1.00 \ ATOM 8 C SER H 115 -99.108 22.336 32.792 1.00 -1.00 \ ATOM 9 O SER H 115 -99.330 22.930 31.734 1.00 -1.00 \ ATOM 10 CB SER H 115 -96.932 22.275 34.067 1.00 -1.00 \ ATOM 11 OG SER H 115 -96.205 23.359 33.515 1.00 -1.00 \ ATOM 12 N THR H 116 -99.973 22.306 33.804 1.00 -0.22 \ ATOM 13 CA THR H 116 -101.190 23.120 33.813 1.00 -0.22 \ ATOM 14 C THR H 116 -102.051 22.967 32.552 1.00 -0.22 \ ATOM 15 O THR H 116 -101.930 23.733 31.593 1.00 -0.22 \ ATOM 16 CB THR H 116 -100.857 24.610 34.065 1.00 -0.22 \ ATOM 17 OG1 THR H 116 -100.200 25.166 32.920 1.00 -0.22 \ ATOM 18 CG2 THR H 116 -99.945 24.746 35.276 1.00 -0.22 \ ATOM 19 N LEU H 141 -114.150 14.664 20.975 1.00 1.11 \ ATOM 20 CA LEU H 141 -113.257 13.861 21.806 1.00 1.11 \ ATOM 21 C LEU H 141 -112.579 14.727 22.877 1.00 1.11 \ ATOM 22 O LEU H 141 -112.812 15.939 22.944 1.00 1.11 \ ATOM 23 CB LEU H 141 -112.204 13.160 20.931 1.00 1.11 \ ATOM 24 CG LEU H 141 -111.172 12.260 21.622 1.00 1.11 \ ATOM 25 CD1 LEU H 141 -111.851 11.161 22.434 1.00 1.11 \ ATOM 26 CD2 LEU H 141 -110.165 11.665 20.637 1.00 1.11 \ ATOM 27 N VAL H 142 -111.787 14.091 23.741 1.00 0.79 \ ATOM 28 CA VAL H 142 -110.844 14.797 24.610 1.00 0.79 \ ATOM 29 C VAL H 142 -109.427 14.389 24.210 1.00 0.79 \ ATOM 30 O VAL H 142 -109.139 13.203 24.041 1.00 0.79 \ ATOM 31 CB VAL H 142 -111.082 14.506 26.114 1.00 0.79 \ ATOM 32 CG1 VAL H 142 -111.251 13.017 26.348 1.00 0.79 \ ATOM 33 CG2 VAL H 142 -109.946 15.070 26.967 1.00 0.79 \ ATOM 34 N LYS H 143 -108.555 15.372 24.015 1.00 -0.61 \ ATOM 35 CA LYS H 143 -107.192 15.096 23.579 1.00 -0.61 \ ATOM 36 C LYS H 143 -106.231 16.165 24.072 1.00 -0.61 \ ATOM 37 O LYS H 143 -106.602 17.333 24.192 1.00 -0.61 \ ATOM 38 CB LYS H 143 -107.118 15.002 22.049 1.00 -0.61 \ ATOM 39 CG LYS H 143 -105.867 15.638 21.452 1.00 -0.61 \ ATOM 40 CD LYS H 143 -105.147 14.690 20.501 1.00 -0.61 \ ATOM 41 CE LYS H 143 -104.429 13.560 21.240 1.00 -0.61 \ ATOM 42 NZ LYS H 143 -103.071 13.944 21.727 1.00 -0.61 \ ATOM 43 N ASP H 144 -104.995 15.760 24.348 1.00 1.09 \ ATOM 44 CA ASP H 144 -103.956 16.686 24.789 1.00 1.09 \ ATOM 45 C ASP H 144 -104.433 17.565 25.947 1.00 1.09 \ ATOM 46 O ASP H 144 -104.620 18.772 25.788 1.00 1.09 \ ATOM 47 CB ASP H 144 -103.468 17.539 23.609 1.00 1.09 \ ATOM 48 CG ASP H 144 -102.539 16.774 22.682 1.00 1.09 \ ATOM 49 OD1 ASP H 144 -101.626 16.091 23.191 1.00 1.09 \ ATOM 50 OD2 ASP H 144 -102.725 16.844 21.449 1.00 1.09 \ ATOM 51 N TYR H 145 -104.619 16.952 27.113 1.00 2.21 \ ATOM 52 CA TYR H 145 -105.212 17.647 28.248 1.00 2.21 \ ATOM 53 C TYR H 145 -104.411 17.477 29.532 1.00 2.21 \ ATOM 54 O TYR H 145 -103.521 16.638 29.629 1.00 2.21 \ ATOM 55 CB TYR H 145 -106.634 17.136 28.496 1.00 2.21 \ ATOM 56 CG TYR H 145 -106.669 15.847 29.286 1.00 2.21 \ ATOM 57 CD1 TYR H 145 -106.230 14.658 28.724 1.00 2.21 \ ATOM 58 CD2 TYR H 145 -107.139 15.819 30.592 1.00 2.21 \ ATOM 59 CE1 TYR H 145 -106.256 13.478 29.437 1.00 2.21 \ ATOM 60 CE2 TYR H 145 -107.171 14.642 31.315 1.00 2.21 \ ATOM 61 CZ TYR H 145 -106.727 13.474 30.730 1.00 2.21 \ ATOM 62 OH TYR H 145 -106.753 12.295 31.440 1.00 2.21 \ ATOM 63 N PHE H 146 -104.732 18.310 30.513 1.00 0.02 \ ATOM 64 CA PHE H 146 -104.135 18.227 31.837 1.00 0.02 \ ATOM 65 C PHE H 146 -105.118 18.678 32.917 1.00 0.02 \ ATOM 66 O PHE H 146 -106.053 19.432 32.634 1.00 0.02 \ ATOM 67 CB PHE H 146 -102.881 19.103 31.887 1.00 0.02 \ ATOM 68 CG PHE H 146 -101.720 18.473 32.608 1.00 0.02 \ ATOM 69 CD1 PHE H 146 -101.022 17.427 32.028 1.00 0.02 \ ATOM 70 CD2 PHE H 146 -101.311 18.939 33.851 1.00 0.02 \ ATOM 71 CE1 PHE H 146 -99.949 16.845 32.679 1.00 0.02 \ ATOM 72 CE2 PHE H 146 -100.243 18.361 34.503 1.00 0.02 \ ATOM 73 CZ PHE H 146 -99.561 17.314 33.916 1.00 0.02 \ ATOM 74 N PRO H 147 -104.915 18.204 34.158 1.00 2.86 \ ATOM 75 CA PRO H 147 -104.054 17.071 34.512 1.00 2.86 \ ATOM 76 C PRO H 147 -104.869 15.786 34.649 1.00 2.86 \ ATOM 77 O PRO H 147 -106.077 15.790 34.415 1.00 2.86 \ ATOM 78 CB PRO H 147 -103.512 17.480 35.873 1.00 2.86 \ ATOM 79 CG PRO H 147 -104.660 18.201 36.497 1.00 2.86 \ ATOM 80 CD PRO H 147 -105.383 18.917 35.362 1.00 2.86 \ ATOM 81 N GLU H 148 -104.219 14.694 35.033 1.00 -0.60 \ ATOM 82 CA GLU H 148 -104.969 13.513 35.436 1.00 -0.60 \ ATOM 83 C GLU H 148 -105.092 13.490 36.961 1.00 -0.60 \ ATOM 84 O GLU H 148 -104.923 14.520 37.616 1.00 -0.60 \ ATOM 85 CB GLU H 148 -104.334 12.223 34.910 1.00 -0.60 \ ATOM 86 CG GLU H 148 -105.361 11.179 34.459 1.00 -0.60 \ ATOM 87 CD GLU H 148 -104.727 9.902 33.927 1.00 -0.60 \ ATOM 88 OE1 GLU H 148 -105.434 8.872 33.841 1.00 -0.60 \ ATOM 89 OE2 GLU H 148 -103.524 9.929 33.593 1.00 -0.60 \ ATOM 90 N PRO H 167 -110.024 4.992 29.598 1.00 0.34 \ ATOM 91 CA PRO H 167 -108.710 5.030 30.252 1.00 0.34 \ ATOM 92 C PRO H 167 -107.645 5.742 29.411 1.00 0.34 \ ATOM 93 O PRO H 167 -107.536 5.509 28.206 1.00 0.34 \ ATOM 94 CB PRO H 167 -108.363 3.549 30.418 1.00 0.34 \ ATOM 95 CG PRO H 167 -109.092 2.874 29.311 1.00 0.34 \ ATOM 96 CD PRO H 167 -110.377 3.635 29.145 1.00 0.34 \ ATOM 97 N ALA H 168 -106.877 6.610 30.065 1.00 -0.33 \ ATOM 98 CA ALA H 168 -105.880 7.468 29.415 1.00 -0.33 \ ATOM 99 C ALA H 168 -104.572 6.784 29.006 1.00 -0.33 \ ATOM 100 O ALA H 168 -104.264 5.690 29.472 1.00 -0.33 \ ATOM 101 CB ALA H 168 -105.589 8.686 30.290 1.00 -0.33 \ ATOM 102 N VAL H 169 -103.837 7.431 28.103 1.00 -0.47 \ ATOM 103 CA VAL H 169 -102.418 7.146 27.893 1.00 -0.47 \ ATOM 104 C VAL H 169 -101.730 8.437 27.449 1.00 -0.47 \ ATOM 105 O VAL H 169 -102.354 9.292 26.819 1.00 -0.47 \ ATOM 106 CB VAL H 169 -102.166 6.018 26.865 1.00 -0.47 \ ATOM 107 CG1 VAL H 169 -101.812 6.616 25.511 1.00 -0.47 \ ATOM 108 CG2 VAL H 169 -101.050 5.087 27.361 1.00 -0.47 \ ATOM 109 N LEU H 170 -100.458 8.590 27.800 1.00 -0.89 \ ATOM 110 CA LEU H 170 -99.745 9.837 27.543 1.00 -0.89 \ ATOM 111 C LEU H 170 -98.716 9.696 26.422 1.00 -0.89 \ ATOM 112 O LEU H 170 -97.976 8.715 26.372 1.00 -0.89 \ ATOM 113 CB LEU H 170 -99.089 10.344 28.831 1.00 -0.89 \ ATOM 114 CG LEU H 170 -97.709 10.994 28.740 1.00 -0.89 \ ATOM 115 CD1 LEU H 170 -97.655 12.238 29.610 1.00 -0.89 \ ATOM 116 CD2 LEU H 170 -96.634 10.002 29.150 1.00 -0.89 \ ATOM 117 N GLN H 171 -98.678 10.683 25.528 1.00 -0.81 \ ATOM 118 CA GLN H 171 -97.771 10.660 24.381 1.00 -0.81 \ ATOM 119 C GLN H 171 -96.444 11.345 24.703 1.00 -0.81 \ ATOM 120 O GLN H 171 -96.210 11.768 25.836 1.00 -0.81 \ ATOM 121 CB GLN H 171 -98.423 11.337 23.169 1.00 -0.81 \ ATOM 122 CG GLN H 171 -99.928 11.547 23.291 1.00 -0.81 \ ATOM 123 CD GLN H 171 -100.326 13.008 23.181 1.00 -0.81 \ ATOM 124 OE1 GLN H 171 -99.919 13.707 22.251 1.00 -0.81 \ ATOM 125 NE2 GLN H 171 -101.119 13.478 24.138 1.00 -0.81 \ ATOM 126 N SER H 172 -95.587 11.459 23.691 1.00 -0.39 \ ATOM 127 CA SER H 172 -94.263 12.066 23.836 1.00 -0.39 \ ATOM 128 C SER H 172 -94.303 13.574 24.078 1.00 -0.39 \ ATOM 129 O SER H 172 -93.274 14.190 24.363 1.00 -0.39 \ ATOM 130 CB SER H 172 -93.406 11.762 22.600 1.00 -0.39 \ ATOM 131 OG SER H 172 -92.970 12.951 21.967 1.00 -0.39 \ ATOM 132 N SER H 173 -95.488 14.165 23.963 1.00 -0.29 \ ATOM 133 CA SER H 173 -95.636 15.608 24.114 1.00 -0.29 \ ATOM 134 C SER H 173 -95.690 16.006 25.584 1.00 -0.29 \ ATOM 135 O SER H 173 -95.823 17.184 25.915 1.00 -0.29 \ ATOM 136 CB SER H 173 -96.882 16.109 23.374 1.00 -0.29 \ ATOM 137 OG SER H 173 -98.000 15.272 23.613 1.00 -0.29 \ ATOM 138 N GLY H 174 -95.588 15.013 26.462 1.00 0.23 \ ATOM 139 CA GLY H 174 -95.680 15.245 27.891 1.00 0.23 \ ATOM 140 C GLY H 174 -97.130 15.456 28.277 1.00 0.23 \ ATOM 141 O GLY H 174 -97.434 15.932 29.374 1.00 0.23 \ ATOM 142 N LEU H 175 -98.026 15.083 27.365 1.00 -0.71 \ ATOM 143 CA LEU H 175 -99.448 15.376 27.501 1.00 -0.71 \ ATOM 144 C LEU H 175 -100.300 14.113 27.587 1.00 -0.71 \ ATOM 145 O LEU H 175 -99.915 13.061 27.078 1.00 -0.71 \ ATOM 146 CB LEU H 175 -99.896 16.232 26.317 1.00 -0.71 \ ATOM 147 CG LEU H 175 -101.077 17.166 26.552 1.00 -0.71 \ ATOM 148 CD1 LEU H 175 -101.170 17.579 28.012 1.00 -0.71 \ ATOM 149 CD2 LEU H 175 -100.956 18.384 25.657 1.00 -0.71 \ ATOM 150 N TYR H 176 -101.464 14.241 28.223 1.00 1.18 \ ATOM 151 CA TYR H 176 -102.393 13.127 28.421 1.00 1.18 \ ATOM 152 C TYR H 176 -103.584 13.191 27.472 1.00 1.18 \ ATOM 153 O TYR H 176 -104.038 14.277 27.119 1.00 1.18 \ ATOM 154 CB TYR H 176 -102.925 13.126 29.858 1.00 1.18 \ ATOM 155 CG TYR H 176 -101.958 12.596 30.889 1.00 1.18 \ ATOM 156 CD1 TYR H 176 -101.897 11.240 31.175 1.00 1.18 \ ATOM 157 CD2 TYR H 176 -101.116 13.452 31.585 1.00 1.18 \ ATOM 158 CE1 TYR H 176 -101.017 10.750 32.121 1.00 1.18 \ ATOM 159 CE2 TYR H 176 -100.234 12.972 32.531 1.00 1.18 \ ATOM 160 CZ TYR H 176 -100.188 11.621 32.796 1.00 1.18 \ ATOM 161 OH TYR H 176 -99.308 11.143 33.741 1.00 1.18 \ ATOM 162 N SER H 177 -104.065 12.026 27.038 1.00 -0.05 \ ATOM 163 CA SER H 177 -105.312 11.932 26.268 1.00 -0.05 \ ATOM 164 C SER H 177 -105.931 10.517 26.223 1.00 -0.05 \ ATOM 165 O SER H 177 -105.266 9.531 26.544 1.00 -0.05 \ ATOM 166 CB SER H 177 -105.107 12.493 24.864 1.00 -0.05 \ ATOM 167 OG SER H 177 -103.746 12.390 24.494 1.00 -0.05 \ ATOM 168 N LEU H 178 -107.206 10.430 25.842 1.00 -0.47 \ ATOM 169 CA LEU H 178 -107.890 9.144 25.680 1.00 -0.47 \ ATOM 170 C LEU H 178 -109.217 9.348 24.953 1.00 -0.47 \ ATOM 171 O LEU H 178 -109.838 10.404 25.066 1.00 -0.47 \ ATOM 172 CB LEU H 178 -108.134 8.468 27.033 1.00 -0.47 \ ATOM 173 CG LEU H 178 -109.585 8.401 27.532 1.00 -0.47 \ ATOM 174 CD1 LEU H 178 -110.289 7.146 27.023 1.00 -0.47 \ ATOM 175 CD2 LEU H 178 -109.632 8.456 29.052 1.00 -0.47 \ """, "e4hf5H2_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e4hf5H2_csv", state=0, origin=1) cmd.zoom("e4hf5H2_csv", animate=-1)