cmd.read_pdbstr("""\ ATOM 1 N VAL y 18 34.429 -46.835 12.350 1.00 -1.50 \ ATOM 2 CA VAL y 18 33.093 -46.752 11.765 1.00 -1.50 \ ATOM 3 C VAL y 18 32.203 -45.872 12.650 1.00 -1.50 \ ATOM 4 O VAL y 18 31.368 -45.116 12.152 1.00 -1.50 \ ATOM 5 CB VAL y 18 32.491 -48.161 11.541 1.00 -1.50 \ ATOM 6 CG1 VAL y 18 33.577 -49.104 11.032 1.00 -1.50 \ ATOM 7 CG2 VAL y 18 31.854 -48.721 12.813 1.00 -1.50 \ ATOM 8 N ILE y 19 32.418 -45.958 13.959 1.00 0.64 \ ATOM 9 CA ILE y 19 31.838 -45.044 14.932 1.00 0.64 \ ATOM 10 C ILE y 19 32.977 -44.757 15.927 1.00 0.64 \ ATOM 11 O ILE y 19 32.832 -43.986 16.881 1.00 0.64 \ ATOM 12 CB ILE y 19 30.544 -45.622 15.598 1.00 0.64 \ ATOM 13 CG1 ILE y 19 29.389 -45.687 14.588 1.00 0.64 \ ATOM 14 CG2 ILE y 19 30.069 -44.788 16.775 1.00 0.64 \ ATOM 15 CD1 ILE y 19 29.025 -47.069 14.115 1.00 0.64 \ ATOM 16 N ALA y 20 34.131 -45.375 15.668 1.00 0.64 \ ATOM 17 CA ALA y 20 35.389 -44.923 16.255 1.00 0.64 \ ATOM 18 C ALA y 20 35.539 -43.455 15.880 1.00 0.64 \ ATOM 19 O ALA y 20 36.043 -42.648 16.660 1.00 0.64 \ ATOM 20 CB ALA y 20 36.561 -45.748 15.750 1.00 0.64 \ ATOM 21 N GLN y 21 35.112 -43.148 14.654 1.00 0.64 \ ATOM 22 CA GLN y 21 34.612 -41.826 14.261 1.00 0.64 \ ATOM 23 C GLN y 21 34.187 -40.966 15.435 1.00 0.64 \ ATOM 24 O GLN y 21 34.822 -39.972 15.785 1.00 0.64 \ ATOM 25 CB GLN y 21 33.379 -41.979 13.371 1.00 0.64 \ ATOM 26 CG GLN y 21 33.544 -41.688 11.906 1.00 0.64 \ ATOM 27 CD GLN y 21 34.411 -42.706 11.215 1.00 0.64 \ ATOM 28 OE1 GLN y 21 34.270 -43.912 11.430 1.00 0.64 \ ATOM 29 NE2 GLN y 21 35.297 -42.230 10.352 1.00 0.64 \ ATOM 30 N LEU y 22 33.068 -41.399 16.005 1.00 0.64 \ ATOM 31 CA LEU y 22 32.266 -40.661 16.962 1.00 0.64 \ ATOM 32 C LEU y 22 32.871 -40.671 18.356 1.00 0.64 \ ATOM 33 O LEU y 22 32.573 -39.808 19.180 1.00 0.64 \ ATOM 34 CB LEU y 22 30.852 -41.257 16.959 1.00 0.64 \ ATOM 35 CG LEU y 22 29.760 -41.112 18.016 1.00 0.64 \ ATOM 36 CD1 LEU y 22 28.435 -41.460 17.362 1.00 0.64 \ ATOM 37 CD2 LEU y 22 30.007 -42.043 19.190 1.00 0.64 \ ATOM 38 N THR y 23 33.716 -41.660 18.615 1.00 0.64 \ ATOM 39 CA THR y 23 34.370 -41.785 19.908 1.00 0.64 \ ATOM 40 C THR y 23 35.468 -40.735 20.047 1.00 0.64 \ ATOM 41 O THR y 23 35.701 -40.207 21.134 1.00 0.64 \ ATOM 42 CB THR y 23 34.965 -43.191 20.100 1.00 0.64 \ ATOM 43 OG1 THR y 23 34.007 -44.175 19.691 1.00 0.64 \ ATOM 44 CG2 THR y 23 35.333 -43.423 21.556 1.00 0.64 \ ATOM 45 N MET y 24 36.129 -40.424 18.937 1.00 0.64 \ ATOM 46 CA MET y 24 37.199 -39.433 18.940 1.00 0.64 \ ATOM 47 C MET y 24 36.661 -38.032 19.223 1.00 0.64 \ ATOM 48 O MET y 24 37.148 -37.346 20.120 1.00 0.64 \ ATOM 49 CB MET y 24 37.953 -39.446 17.609 1.00 0.64 \ ATOM 50 CG MET y 24 38.536 -40.799 17.242 1.00 0.64 \ ATOM 51 SD MET y 24 39.372 -41.595 18.627 1.00 0.64 \ ATOM 52 CE MET y 24 39.806 -43.172 17.897 1.00 0.64 \ ATOM 53 N ILE y 25 35.651 -37.615 18.463 1.00 -1.50 \ ATOM 54 CA ILE y 25 35.045 -36.299 18.653 1.00 -1.50 \ ATOM 55 C ILE y 25 34.387 -36.179 20.025 1.00 -1.50 \ ATOM 56 O ILE y 25 34.174 -35.075 20.526 1.00 -1.50 \ ATOM 57 CB ILE y 25 33.996 -35.985 17.560 1.00 -1.50 \ ATOM 58 CG1 ILE y 25 33.004 -37.139 17.408 1.00 -1.50 \ ATOM 59 CG2 ILE y 25 34.671 -35.702 16.231 1.00 -1.50 \ ATOM 60 CD1 ILE y 25 31.671 -36.899 18.084 1.00 -1.50 \ ATOM 61 N ALA y 26 34.068 -37.321 20.628 1.00 0.64 \ ATOM 62 CA ALA y 26 33.475 -37.346 21.959 1.00 0.64 \ ATOM 63 C ALA y 26 34.472 -36.874 23.013 1.00 0.64 \ ATOM 64 O ALA y 26 34.235 -35.879 23.698 1.00 0.64 \ ATOM 65 CB ALA y 26 32.975 -38.743 22.290 1.00 0.64 \ ATOM 66 N MET y 27 35.587 -37.589 23.135 1.00 -1.50 \ ATOM 67 CA MET y 27 36.611 -37.250 24.120 1.00 -1.50 \ ATOM 68 C MET y 27 37.288 -35.918 23.808 1.00 -1.50 \ ATOM 69 O MET y 27 37.572 -35.133 24.712 1.00 -1.50 \ ATOM 70 CB MET y 27 37.664 -38.358 24.208 1.00 -1.50 \ ATOM 71 CG MET y 27 37.216 -39.589 24.983 1.00 -1.50 \ ATOM 72 SD MET y 27 36.821 -40.994 23.927 1.00 -1.50 \ ATOM 73 CE MET y 27 38.407 -41.292 23.148 1.00 -1.50 \ ATOM 74 N ILE y 28 37.547 -35.668 22.529 1.00 0.64 \ ATOM 75 CA ILE y 28 38.177 -34.421 22.109 1.00 0.64 \ ATOM 76 C ILE y 28 37.245 -33.234 22.333 1.00 0.64 \ ATOM 77 O ILE y 28 37.657 -32.199 22.858 1.00 0.64 \ ATOM 78 CB ILE y 28 38.596 -34.474 20.624 1.00 0.64 \ ATOM 79 CG1 ILE y 28 39.753 -35.458 20.437 1.00 0.64 \ ATOM 80 CG2 ILE y 28 38.997 -33.094 20.126 1.00 0.64 \ ATOM 81 CD1 ILE y 28 40.271 -35.533 19.017 1.00 0.64 \ ATOM 82 N GLY y 29 35.984 -33.394 21.945 1.00 -1.50 \ ATOM 83 CA GLY y 29 35.001 -32.333 22.073 1.00 -1.50 \ ATOM 84 C GLY y 29 34.677 -31.966 23.508 1.00 -1.50 \ ATOM 85 O GLY y 29 34.407 -30.805 23.812 1.00 -1.50 \ ATOM 86 N ILE y 30 34.704 -32.956 24.395 1.00 0.64 \ ATOM 87 CA ILE y 30 34.386 -32.726 25.800 1.00 0.64 \ ATOM 88 C ILE y 30 35.621 -32.260 26.570 1.00 0.64 \ ATOM 89 O ILE y 30 35.509 -31.739 27.679 1.00 0.64 \ ATOM 90 CB ILE y 30 33.809 -34.000 26.465 1.00 0.64 \ ATOM 91 CG1 ILE y 30 33.052 -33.649 27.749 1.00 0.64 \ ATOM 92 CG2 ILE y 30 34.911 -35.015 26.740 1.00 0.64 \ ATOM 93 CD1 ILE y 30 31.902 -32.687 27.539 1.00 0.64 \ ATOM 94 N ALA y 31 36.795 -32.438 25.969 1.00 0.64 \ ATOM 95 CA ALA y 31 38.057 -32.078 26.611 1.00 0.64 \ ATOM 96 C ALA y 31 38.128 -30.587 26.925 1.00 0.64 \ ATOM 97 O ALA y 31 38.706 -30.182 27.933 1.00 0.64 \ ATOM 98 CB ALA y 31 39.231 -32.488 25.734 1.00 0.64 \ ATOM 99 N GLY y 32 37.537 -29.777 26.053 1.00 0.64 \ ATOM 100 CA GLY y 32 37.483 -28.340 26.255 1.00 0.64 \ ATOM 101 C GLY y 32 36.659 -27.939 27.465 1.00 0.64 \ ATOM 102 O GLY y 32 37.207 -27.456 28.455 1.00 0.64 \ ATOM 103 N PRO y 33 35.331 -28.132 27.390 1.00 0.64 \ ATOM 104 CA PRO y 33 34.407 -27.794 28.480 1.00 0.64 \ ATOM 105 C PRO y 33 34.758 -28.448 29.816 1.00 0.64 \ ATOM 106 O PRO y 33 34.436 -27.887 30.864 1.00 0.64 \ ATOM 107 CB PRO y 33 33.062 -28.314 27.965 1.00 0.64 \ ATOM 108 CG PRO y 33 33.182 -28.244 26.488 1.00 0.64 \ ATOM 109 CD PRO y 33 34.613 -28.586 26.185 1.00 0.64 \ ATOM 110 N MET y 34 35.401 -29.613 29.779 1.00 -1.50 \ ATOM 111 CA MET y 34 35.777 -30.316 31.002 1.00 -1.50 \ ATOM 112 C MET y 34 36.749 -29.483 31.830 1.00 -1.50 \ ATOM 113 O MET y 34 36.657 -29.443 33.056 1.00 -1.50 \ ATOM 114 CB MET y 34 36.395 -31.677 30.677 1.00 -1.50 \ ATOM 115 CG MET y 34 36.660 -32.548 31.894 1.00 -1.50 \ ATOM 116 SD MET y 34 37.351 -34.157 31.461 1.00 -1.50 \ ATOM 117 CE MET y 34 36.064 -34.804 30.397 1.00 -1.50 \ ATOM 118 N ILE y 35 37.676 -28.819 31.147 1.00 -1.50 \ ATOM 119 CA ILE y 35 38.635 -27.936 31.801 1.00 -1.50 \ ATOM 120 C ILE y 35 37.910 -26.791 32.499 1.00 -1.50 \ ATOM 121 O ILE y 35 38.238 -26.429 33.629 1.00 -1.50 \ ATOM 122 CB ILE y 35 39.652 -27.367 30.791 1.00 -1.50 \ ATOM 123 CG1 ILE y 35 40.401 -28.506 30.096 1.00 -1.50 \ ATOM 124 CG2 ILE y 35 40.627 -26.421 31.479 1.00 -1.50 \ ATOM 125 CD1 ILE y 35 41.273 -28.053 28.948 1.00 -1.50 \ ATOM 126 N ILE y 36 36.915 -26.234 31.817 1.00 0.64 \ ATOM 127 CA ILE y 36 36.099 -25.160 32.370 1.00 0.64 \ ATOM 128 C ILE y 36 35.300 -25.646 33.578 1.00 0.64 \ ATOM 129 O ILE y 36 35.159 -24.930 34.571 1.00 0.64 \ ATOM 130 CB ILE y 36 35.130 -24.592 31.312 1.00 0.64 \ ATOM 131 CG1 ILE y 36 35.898 -24.185 30.052 1.00 0.64 \ ATOM 132 CG2 ILE y 36 34.349 -23.412 31.872 1.00 0.64 \ ATOM 133 CD1 ILE y 36 36.949 -23.124 30.294 1.00 0.64 \ ATOM 134 N PHE y 37 34.785 -26.868 33.488 1.00 0.64 \ ATOM 135 CA PHE y 37 34.022 -27.461 34.581 1.00 0.64 \ ATOM 136 C PHE y 37 34.921 -27.750 35.779 1.00 0.64 \ ATOM 137 O PHE y 37 34.529 -27.533 36.925 1.00 0.64 \ ATOM 138 CB PHE y 37 33.327 -28.745 34.117 1.00 0.64 \ ATOM 139 CG PHE y 37 32.460 -29.382 35.168 1.00 0.64 \ ATOM 140 CD1 PHE y 37 31.168 -28.931 35.384 1.00 0.64 \ ATOM 141 CD2 PHE y 37 32.934 -30.434 35.934 1.00 0.64 \ ATOM 142 CE1 PHE y 37 30.367 -29.515 36.348 1.00 0.64 \ ATOM 143 CE2 PHE y 37 32.138 -31.022 36.900 1.00 0.64 \ ATOM 144 CZ PHE y 37 30.853 -30.562 37.107 1.00 0.64 \ ATOM 145 N LEU y 38 36.126 -28.240 35.505 1.00 0.64 \ ATOM 146 CA LEU y 38 37.088 -28.540 36.560 1.00 0.64 \ ATOM 147 C LEU y 38 37.575 -27.268 37.245 1.00 0.64 \ ATOM 148 O LEU y 38 37.749 -27.239 38.460 1.00 0.64 \ ATOM 149 CB LEU y 38 38.278 -29.324 35.999 1.00 0.64 \ ATOM 150 CG LEU y 38 38.022 -30.791 35.649 1.00 0.64 \ ATOM 151 CD1 LEU y 38 39.273 -31.434 35.073 1.00 0.64 \ ATOM 152 CD2 LEU y 38 37.537 -31.555 36.870 1.00 0.64 \ ATOM 153 N LEU y 39 37.788 -26.216 36.461 1.00 0.64 \ ATOM 154 CA LEU y 39 38.236 -24.940 37.007 1.00 0.64 \ ATOM 155 C LEU y 39 37.110 -24.217 37.739 1.00 0.64 \ ATOM 156 O LEU y 39 37.353 -23.280 38.500 1.00 0.64 \ ATOM 157 CB LEU y 39 38.800 -24.050 35.898 1.00 0.64 \ ATOM 158 CG LEU y 39 40.189 -24.428 35.381 1.00 0.64 \ ATOM 159 CD1 LEU y 39 40.623 -23.491 34.265 1.00 0.64 \ ATOM 160 CD2 LEU y 39 41.197 -24.415 36.520 1.00 0.64 \ ATOM 161 N ALA y 40 35.877 -24.656 37.505 1.00 0.64 \ ATOM 162 CA ALA y 40 34.720 -24.070 38.169 1.00 0.64 \ ATOM 163 C ALA y 40 34.510 -24.694 39.544 1.00 0.64 \ ATOM 164 O ALA y 40 34.333 -23.986 40.536 1.00 0.64 \ ATOM 165 CB ALA y 40 33.474 -24.236 37.313 1.00 0.64 \ ATOM 166 N VAL y 41 34.533 -26.023 39.598 1.00 -1.50 \ ATOM 167 CA VAL y 41 34.351 -26.738 40.857 1.00 -1.50 \ ATOM 168 C VAL y 41 35.551 -26.530 41.778 1.00 -1.50 \ ATOM 169 O VAL y 41 35.427 -26.601 43.001 1.00 -1.50 \ ATOM 170 CB VAL y 41 34.125 -28.249 40.627 1.00 -1.50 \ ATOM 171 CG1 VAL y 41 32.818 -28.482 39.883 1.00 -1.50 \ ATOM 172 CG2 VAL y 41 35.292 -28.862 39.868 1.00 -1.50 \ ATOM 173 N ARG y 42 36.710 -26.264 41.185 1.00 0.64 \ ATOM 174 CA ARG y 42 37.905 -25.942 41.953 1.00 0.64 \ ATOM 175 C ARG y 42 37.963 -24.447 42.237 1.00 0.64 \ ATOM 176 O ARG y 42 38.822 -23.982 42.988 1.00 0.64 \ ATOM 177 CB ARG y 42 39.160 -26.385 41.203 1.00 0.64 \ ATOM 178 CG ARG y 42 39.336 -27.888 41.131 1.00 0.64 \ ATOM 179 CD ARG y 42 40.661 -28.244 40.489 1.00 0.64 \ ATOM 180 NE ARG y 42 41.394 -29.224 41.280 1.00 0.64 \ ATOM 181 CZ ARG y 42 42.552 -28.982 41.882 1.00 0.64 \ ATOM 182 NH1 ARG y 42 43.118 -27.788 41.787 1.00 0.64 \ ATOM 183 NH2 ARG y 42 43.140 -29.939 42.582 1.00 0.64 \ ATOM 184 N ARG y 43 37.034 -23.711 41.630 1.00 -1.50 \ ATOM 185 CA ARG y 43 36.985 -22.255 41.726 1.00 -1.50 \ ATOM 186 C ARG y 43 38.329 -21.640 41.348 1.00 -1.50 \ ATOM 187 O ARG y 43 38.868 -20.803 42.072 1.00 -1.50 \ ATOM 188 CB ARG y 43 36.576 -21.816 43.135 1.00 -1.50 \ ATOM 189 CG ARG y 43 35.288 -22.451 43.639 1.00 -1.50 \ ATOM 190 CD ARG y 43 34.190 -21.414 43.839 1.00 -1.50 \ ATOM 191 NE ARG y 43 33.146 -21.891 44.743 1.00 -1.50 \ ATOM 192 CZ ARG y 43 31.916 -21.391 44.802 1.00 -1.50 \ ATOM 193 NH1 ARG y 43 31.562 -20.392 44.004 1.00 -1.50 \ ATOM 194 NH2 ARG y 43 31.036 -21.891 45.659 1.00 -1.50 \ ATOM 195 N GLY y 44 38.866 -22.070 40.209 1.00 0.64 \ ATOM 196 CA GLY y 44 40.157 -21.599 39.744 1.00 0.64 \ ATOM 197 C GLY y 44 40.100 -20.198 39.168 1.00 0.64 \ ATOM 198 O GLY y 44 39.073 -19.524 39.245 1.00 0.64 \ ATOM 199 N ASN y 45 41.210 -19.760 38.583 1.00 -1.50 \ ATOM 200 CA ASN y 45 41.297 -18.419 38.019 1.00 -1.50 \ ATOM 201 C ASN y 45 40.611 -18.324 36.659 1.00 -1.50 \ ATOM 202 O ASN y 45 41.269 -18.182 35.628 1.00 -1.50 \ ATOM 203 CB ASN y 45 42.760 -17.988 37.898 1.00 -1.50 \ ATOM 204 CG ASN y 45 42.908 -16.510 37.591 1.00 -1.50 \ ATOM 205 OD1 ASN y 45 42.075 -15.696 37.989 1.00 -1.50 \ ATOM 206 ND2 ASN y 45 43.972 -16.156 36.879 1.00 -1.50 \ ATOM 207 N LEU y 46 39.284 -18.407 36.663 1.00 0.64 \ ATOM 208 CA LEU y 46 38.505 -18.281 35.437 1.00 0.64 \ ATOM 209 C LEU y 46 38.174 -16.821 35.149 1.00 0.64 \ ATOM 210 O LEU y 46 38.057 -16.415 33.993 1.00 0.64 \ ATOM 211 CB LEU y 46 37.219 -19.104 35.529 1.00 0.64 \ ATOM 212 CG LEU y 46 37.370 -20.619 35.389 1.00 0.64 \ ATOM 213 CD1 LEU y 46 36.045 -21.317 35.649 1.00 0.64 \ ATOM 214 CD2 LEU y 46 37.899 -20.969 34.008 1.00 0.64 \ ATOM 215 OXT LEU y 46 38.021 -16.013 36.065 1.00 0.64 \ """, "e4pj0y1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e4pj0y1_csv", state=0, origin=1) cmd.zoom("e4pj0y1_csv", animate=-1)