cmd.read_pdbstr("""\ ATOM 1 N GLU A 335 18.291 -9.709 -4.008 1.00 -1.00 \ ATOM 2 CA GLU A 335 17.644 -8.604 -4.707 1.00 -1.00 \ ATOM 3 C GLU A 335 16.164 -8.529 -4.350 1.00 -1.00 \ ATOM 4 O GLU A 335 15.770 -8.922 -3.247 1.00 -1.00 \ ATOM 5 CB GLU A 335 17.826 -8.737 -6.223 1.00 -1.00 \ ATOM 6 N ARG A 336 15.357 -8.038 -5.290 1.00 0.72 \ ATOM 7 CA ARG A 336 13.956 -7.688 -5.040 1.00 0.72 \ ATOM 8 C ARG A 336 13.816 -6.709 -3.880 1.00 0.72 \ ATOM 9 O ARG A 336 13.271 -7.062 -2.831 1.00 0.72 \ ATOM 10 CB ARG A 336 13.119 -8.929 -4.747 1.00 0.72 \ ATOM 11 CG ARG A 336 13.096 -9.948 -5.847 1.00 0.72 \ ATOM 12 CD ARG A 336 12.316 -11.146 -5.377 1.00 0.72 \ ATOM 13 NE ARG A 336 11.831 -11.940 -6.493 1.00 0.72 \ ATOM 14 CZ ARG A 336 10.770 -12.729 -6.425 1.00 0.72 \ ATOM 15 NH1 ARG A 336 10.089 -12.826 -5.287 1.00 0.72 \ ATOM 16 NH2 ARG A 336 10.391 -13.418 -7.491 1.00 0.72 \ ATOM 17 N PRO A 337 14.294 -5.471 -4.066 1.00 -0.22 \ ATOM 18 CA PRO A 337 14.277 -4.515 -2.956 1.00 -0.22 \ ATOM 19 C PRO A 337 12.906 -3.905 -2.676 1.00 -0.22 \ ATOM 20 O PRO A 337 12.748 -3.214 -1.684 1.00 -0.22 \ ATOM 21 CB PRO A 337 15.265 -3.436 -3.416 1.00 -0.22 \ ATOM 22 CG PRO A 337 15.190 -3.475 -4.883 1.00 -0.22 \ ATOM 23 CD PRO A 337 14.932 -4.909 -5.268 1.00 -0.22 \ ATOM 24 N TYR A 338 11.911 -4.153 -3.516 1.00 0.56 \ ATOM 25 CA TYR A 338 10.637 -3.500 -3.295 1.00 0.56 \ ATOM 26 C TYR A 338 9.646 -4.402 -2.556 1.00 0.56 \ ATOM 27 O TYR A 338 8.940 -5.191 -3.179 1.00 0.56 \ ATOM 28 CB TYR A 338 10.075 -3.031 -4.640 1.00 0.56 \ ATOM 29 CG TYR A 338 11.018 -2.080 -5.341 1.00 0.56 \ ATOM 30 CD1 TYR A 338 11.024 -0.724 -5.024 1.00 0.56 \ ATOM 31 CD2 TYR A 338 11.914 -2.534 -6.305 1.00 0.56 \ ATOM 32 CE1 TYR A 338 11.896 0.160 -5.647 1.00 0.56 \ ATOM 33 CE2 TYR A 338 12.783 -1.654 -6.941 1.00 0.56 \ ATOM 34 CZ TYR A 338 12.770 -0.311 -6.600 1.00 0.56 \ ATOM 35 OH TYR A 338 13.621 0.571 -7.227 1.00 0.56 \ ATOM 36 N ALA A 339 9.600 -4.283 -1.224 1.00 -0.93 \ ATOM 37 CA ALA A 339 8.713 -5.119 -0.407 1.00 -0.93 \ ATOM 38 C ALA A 339 7.359 -4.458 -0.132 1.00 -0.93 \ ATOM 39 O ALA A 339 7.286 -3.246 0.076 1.00 -0.93 \ ATOM 40 CB ALA A 339 9.392 -5.478 0.917 1.00 -0.93 \ ATOM 41 N CYS A 340 6.294 -5.265 -0.131 1.00 1.92 \ ATOM 42 CA CYS A 340 4.954 -4.799 0.219 1.00 1.92 \ ATOM 43 C CYS A 340 4.910 -4.472 1.695 1.00 1.92 \ ATOM 44 O CYS A 340 5.308 -5.282 2.501 1.00 1.92 \ ATOM 45 CB CYS A 340 3.883 -5.853 -0.101 1.00 1.92 \ ATOM 46 SG CYS A 340 2.187 -5.253 0.216 1.00 1.92 \ ATOM 47 N PRO A 341 4.425 -3.283 2.046 1.00 -0.86 \ ATOM 48 CA PRO A 341 4.453 -2.928 3.468 1.00 -0.86 \ ATOM 49 C PRO A 341 3.151 -3.230 4.222 1.00 -0.86 \ ATOM 50 O PRO A 341 3.057 -2.906 5.415 1.00 -0.86 \ ATOM 51 CB PRO A 341 4.743 -1.422 3.437 1.00 -0.86 \ ATOM 52 CG PRO A 341 4.191 -0.955 2.100 1.00 -0.86 \ ATOM 53 CD PRO A 341 4.136 -2.137 1.166 1.00 -0.86 \ ATOM 54 N VAL A 342 2.181 -3.854 3.565 1.00 -0.73 \ ATOM 55 CA VAL A 342 0.953 -4.269 4.236 1.00 -0.73 \ ATOM 56 C VAL A 342 1.280 -5.425 5.184 1.00 -0.73 \ ATOM 57 O VAL A 342 2.099 -6.286 4.853 1.00 -0.73 \ ATOM 58 CB VAL A 342 -0.151 -4.664 3.215 1.00 -0.73 \ ATOM 59 CG1 VAL A 342 -1.372 -5.251 3.924 1.00 -0.73 \ ATOM 60 CG2 VAL A 342 -0.548 -3.456 2.389 1.00 -0.73 \ ATOM 61 N GLU A 343 0.659 -5.413 6.369 1.00 -0.86 \ ATOM 62 CA GLU A 343 1.095 -6.226 7.516 1.00 -0.86 \ ATOM 63 C GLU A 343 1.364 -7.692 7.234 1.00 -0.86 \ ATOM 64 O GLU A 343 2.476 -8.184 7.444 1.00 -0.86 \ ATOM 65 CB GLU A 343 0.062 -6.181 8.655 1.00 -0.86 \ ATOM 66 CG GLU A 343 -0.243 -4.819 9.217 1.00 -0.86 \ ATOM 67 CD GLU A 343 -1.229 -4.058 8.356 1.00 -0.86 \ ATOM 68 OE1 GLU A 343 -1.928 -4.693 7.529 1.00 -0.86 \ ATOM 69 OE2 GLU A 343 -1.298 -2.823 8.494 1.00 -0.86 \ ATOM 70 N SER A 344 0.328 -8.396 6.797 1.00 -0.67 \ ATOM 71 CA SER A 344 0.398 -9.845 6.682 1.00 -0.67 \ ATOM 72 C SER A 344 0.858 -10.270 5.294 1.00 -0.67 \ ATOM 73 O SER A 344 0.705 -11.430 4.908 1.00 -0.67 \ ATOM 74 CB SER A 344 -0.962 -10.467 7.003 1.00 -0.67 \ ATOM 75 N CYS A 345 1.432 -9.326 4.552 1.00 1.92 \ ATOM 76 CA CYS A 345 1.890 -9.586 3.193 1.00 1.92 \ ATOM 77 C CYS A 345 3.412 -9.614 3.111 1.00 1.92 \ ATOM 78 O CYS A 345 4.085 -8.662 3.529 1.00 1.92 \ ATOM 79 CB CYS A 345 1.339 -8.525 2.241 1.00 1.92 \ ATOM 80 SG CYS A 345 1.549 -8.946 0.505 1.00 1.92 \ ATOM 81 N ASP A 346 3.940 -10.696 2.544 1.00 -0.81 \ ATOM 82 CA ASP A 346 5.377 -10.907 2.427 1.00 -0.81 \ ATOM 83 C ASP A 346 5.914 -10.815 0.988 1.00 -0.81 \ ATOM 84 O ASP A 346 7.060 -11.202 0.730 1.00 -0.81 \ ATOM 85 CB ASP A 346 5.744 -12.280 3.012 1.00 -0.81 \ ATOM 86 N ARG A 347 5.108 -10.305 0.058 1.00 0.01 \ ATOM 87 CA ARG A 347 5.523 -10.263 -1.341 1.00 0.01 \ ATOM 88 C ARG A 347 6.647 -9.236 -1.530 1.00 0.01 \ ATOM 89 O ARG A 347 6.674 -8.215 -0.849 1.00 0.01 \ ATOM 90 CB ARG A 347 4.327 -9.948 -2.247 1.00 0.01 \ ATOM 91 N ARG A 348 7.600 -9.530 -2.418 1.00 -0.72 \ ATOM 92 CA ARG A 348 8.698 -8.603 -2.726 1.00 -0.72 \ ATOM 93 C ARG A 348 8.947 -8.598 -4.224 1.00 -0.72 \ ATOM 94 O ARG A 348 8.765 -9.619 -4.885 1.00 -0.72 \ ATOM 95 CB ARG A 348 9.998 -8.978 -2.005 1.00 -0.72 \ ATOM 96 CG ARG A 348 9.817 -9.782 -0.744 1.00 -0.72 \ ATOM 97 CD ARG A 348 11.125 -9.922 0.015 1.00 -0.72 \ ATOM 98 NE ARG A 348 11.468 -8.710 0.764 1.00 -0.72 \ ATOM 99 CZ ARG A 348 12.462 -7.886 0.443 1.00 -0.72 \ ATOM 100 NH1 ARG A 348 13.221 -8.146 -0.611 1.00 -0.72 \ ATOM 101 NH2 ARG A 348 12.703 -6.808 1.182 1.00 -0.72 \ ATOM 102 N PHE A 349 9.392 -7.464 -4.758 1.00 1.24 \ ATOM 103 CA PHE A 349 9.495 -7.319 -6.210 1.00 1.24 \ ATOM 104 C PHE A 349 10.811 -6.682 -6.655 1.00 1.24 \ ATOM 105 O PHE A 349 11.444 -5.936 -5.900 1.00 1.24 \ ATOM 106 CB PHE A 349 8.314 -6.500 -6.730 1.00 1.24 \ ATOM 107 CG PHE A 349 6.969 -7.044 -6.312 1.00 1.24 \ ATOM 108 CD1 PHE A 349 6.296 -7.978 -7.104 1.00 1.24 \ ATOM 109 CD2 PHE A 349 6.386 -6.638 -5.117 1.00 1.24 \ ATOM 110 CE1 PHE A 349 5.061 -8.478 -6.718 1.00 1.24 \ ATOM 111 CE2 PHE A 349 5.153 -7.134 -4.723 1.00 1.24 \ ATOM 112 CZ PHE A 349 4.487 -8.055 -5.517 1.00 1.24 \ ATOM 113 N SER A 350 11.211 -6.989 -7.889 1.00 -0.67 \ ATOM 114 CA SER A 350 12.439 -6.459 -8.484 1.00 -0.67 \ ATOM 115 C SER A 350 12.263 -5.032 -8.991 1.00 -0.67 \ ATOM 116 O SER A 350 13.232 -4.254 -9.075 1.00 -0.67 \ ATOM 117 CB SER A 350 12.891 -7.357 -9.643 1.00 -0.67 \ ATOM 118 OG SER A 350 13.118 -8.679 -9.189 1.00 -0.67 \ ATOM 119 N ARG A 351 11.026 -4.696 -9.334 1.00 -0.79 \ ATOM 120 CA ARG A 351 10.721 -3.395 -9.898 1.00 -0.79 \ ATOM 121 C ARG A 351 9.718 -2.603 -9.069 1.00 -0.79 \ ATOM 122 O ARG A 351 8.727 -3.149 -8.560 1.00 -0.79 \ ATOM 123 CB ARG A 351 10.198 -3.567 -11.323 1.00 -0.79 \ ATOM 124 CG ARG A 351 11.312 -3.544 -12.345 1.00 -0.79 \ ATOM 125 CD ARG A 351 10.888 -4.108 -13.680 1.00 -0.79 \ ATOM 126 NE ARG A 351 9.689 -3.474 -14.214 1.00 -0.79 \ ATOM 127 CZ ARG A 351 9.284 -3.648 -15.470 1.00 -0.79 \ ATOM 128 NH1 ARG A 351 10.014 -4.411 -16.291 1.00 -0.79 \ ATOM 129 NH2 ARG A 351 8.173 -3.070 -15.911 1.00 -0.79 \ ATOM 130 N SER A 352 9.985 -1.306 -8.959 1.00 -0.72 \ ATOM 131 CA SER A 352 9.084 -0.370 -8.305 1.00 -0.72 \ ATOM 132 C SER A 352 7.648 -0.493 -8.811 1.00 -0.72 \ ATOM 133 O SER A 352 6.704 -0.566 -8.022 1.00 -0.72 \ ATOM 134 CB SER A 352 9.572 1.062 -8.534 1.00 -0.72 \ ATOM 135 OG SER A 352 8.912 1.953 -7.646 1.00 -0.72 \ ATOM 136 N ASP A 353 7.478 -0.522 -10.132 1.00 -0.74 \ ATOM 137 CA ASP A 353 6.134 -0.520 -10.706 1.00 -0.74 \ ATOM 138 C ASP A 353 5.369 -1.795 -10.393 1.00 -0.74 \ ATOM 139 O ASP A 353 4.133 -1.782 -10.376 1.00 -0.74 \ ATOM 140 CB ASP A 353 6.185 -0.297 -12.239 1.00 -0.74 \ ATOM 141 CG ASP A 353 7.042 -1.309 -12.963 1.00 -0.74 \ ATOM 142 OD1 ASP A 353 8.206 -1.483 -12.608 1.00 -0.74 \ ATOM 143 OD2 ASP A 353 6.546 -1.944 -13.910 1.00 -0.74 \ ATOM 144 N GLU A 354 6.102 -2.883 -10.153 1.00 -0.74 \ ATOM 145 CA GLU A 354 5.486 -4.151 -9.742 1.00 -0.74 \ ATOM 146 C GLU A 354 4.810 -4.030 -8.396 1.00 -0.74 \ ATOM 147 O GLU A 354 3.745 -4.612 -8.154 1.00 -0.74 \ ATOM 148 CB GLU A 354 6.530 -5.261 -9.647 1.00 -0.74 \ ATOM 149 CG GLU A 354 6.888 -5.869 -10.944 1.00 -0.74 \ ATOM 150 CD GLU A 354 7.694 -7.151 -10.777 1.00 -0.74 \ ATOM 151 OE1 GLU A 354 8.896 -7.066 -10.443 1.00 -0.74 \ ATOM 152 OE2 GLU A 354 7.109 -8.240 -10.989 1.00 -0.74 \ ATOM 153 N LEU A 355 5.471 -3.309 -7.500 1.00 0.59 \ ATOM 154 CA LEU A 355 4.929 -3.117 -6.171 1.00 0.59 \ ATOM 155 C LEU A 355 3.695 -2.201 -6.237 1.00 0.59 \ ATOM 156 O LEU A 355 2.676 -2.451 -5.575 1.00 0.59 \ ATOM 157 CB LEU A 355 6.002 -2.544 -5.236 1.00 0.59 \ ATOM 158 CG LEU A 355 5.476 -2.190 -3.850 1.00 0.59 \ ATOM 159 CD1 LEU A 355 4.817 -3.402 -3.155 1.00 0.59 \ ATOM 160 CD2 LEU A 355 6.610 -1.669 -2.967 1.00 0.59 \ ATOM 161 N THR A 356 3.785 -1.151 -7.059 1.00 -0.65 \ ATOM 162 CA THR A 356 2.674 -0.220 -7.217 1.00 -0.65 \ ATOM 163 C THR A 356 1.425 -0.957 -7.768 1.00 -0.65 \ ATOM 164 O THR A 356 0.289 -0.738 -7.321 1.00 -0.65 \ ATOM 165 CB THR A 356 3.092 0.948 -8.130 1.00 -0.65 \ ATOM 166 OG1 THR A 356 4.138 1.689 -7.485 1.00 -0.65 \ ATOM 167 CG2 THR A 356 1.926 1.868 -8.370 1.00 -0.65 \ ATOM 168 N ARG A 357 1.651 -1.872 -8.705 1.00 -0.68 \ ATOM 169 CA ARG A 357 0.560 -2.688 -9.256 1.00 -0.68 \ ATOM 170 C ARG A 357 0.034 -3.634 -8.194 1.00 -0.68 \ ATOM 171 O ARG A 357 -1.177 -3.780 -7.991 1.00 -0.68 \ ATOM 172 CB ARG A 357 1.036 -3.481 -10.486 1.00 -0.68 \ ATOM 173 CG ARG A 357 -0.053 -4.341 -11.136 1.00 -0.68 \ ATOM 174 CD ARG A 357 0.458 -4.964 -12.421 1.00 -0.68 \ ATOM 175 NE ARG A 357 1.519 -5.896 -12.110 1.00 -0.68 \ ATOM 176 CZ ARG A 357 2.205 -6.606 -13.000 1.00 -0.68 \ ATOM 177 NH1 ARG A 357 1.983 -6.454 -14.306 1.00 -0.68 \ ATOM 178 NH2 ARG A 357 3.135 -7.460 -12.568 1.00 -0.68 \ ATOM 179 N HIS A 358 0.956 -4.283 -7.506 1.00 1.92 \ ATOM 180 CA HIS A 358 0.570 -5.266 -6.510 1.00 1.92 \ ATOM 181 C HIS A 358 -0.277 -4.668 -5.391 1.00 1.92 \ ATOM 182 O HIS A 358 -1.215 -5.292 -4.880 1.00 1.92 \ ATOM 183 CB HIS A 358 1.808 -5.905 -5.884 1.00 1.92 \ ATOM 184 CG HIS A 358 1.519 -6.549 -4.568 1.00 1.92 \ ATOM 185 ND1 HIS A 358 0.890 -7.770 -4.471 1.00 1.92 \ ATOM 186 CD2 HIS A 358 1.758 -6.140 -3.297 1.00 1.92 \ ATOM 187 CE1 HIS A 358 0.737 -8.075 -3.193 1.00 1.92 \ ATOM 188 NE2 HIS A 358 1.266 -7.110 -2.464 1.00 1.92 \ ATOM 189 N ILE A 359 0.073 -3.457 -4.982 1.00 -0.83 \ ATOM 190 CA ILE A 359 -0.563 -2.870 -3.815 1.00 -0.83 \ ATOM 191 C ILE A 359 -2.054 -2.608 -4.103 1.00 -0.83 \ ATOM 192 O ILE A 359 -2.865 -2.506 -3.182 1.00 -0.83 \ ATOM 193 CB ILE A 359 0.176 -1.599 -3.410 1.00 -0.83 \ ATOM 194 CG1 ILE A 359 0.145 -1.414 -1.903 1.00 -0.83 \ ATOM 195 CG2 ILE A 359 -0.375 -0.389 -4.142 1.00 -0.83 \ ATOM 196 CD1 ILE A 359 0.988 -0.269 -1.559 1.00 -0.83 \ ATOM 197 N ARG A 360 -2.438 -2.578 -5.387 1.00 -0.32 \ ATOM 198 CA ARG A 360 -3.853 -2.424 -5.718 1.00 -0.32 \ ATOM 199 C ARG A 360 -4.693 -3.589 -5.203 1.00 -0.32 \ ATOM 200 O ARG A 360 -5.912 -3.455 -5.062 1.00 -0.32 \ ATOM 201 CB ARG A 360 -4.065 -2.282 -7.236 1.00 -0.32 \ ATOM 202 CG ARG A 360 -3.449 -1.019 -7.822 1.00 -0.32 \ ATOM 203 CD ARG A 360 -3.690 -0.873 -9.321 1.00 -0.32 \ ATOM 204 NE ARG A 360 -3.073 0.379 -9.749 1.00 -0.32 \ ATOM 205 CZ ARG A 360 -2.131 0.492 -10.678 1.00 -0.32 \ ATOM 206 NH1 ARG A 360 -1.702 -0.567 -11.350 1.00 -0.32 \ ATOM 207 NH2 ARG A 360 -1.632 1.686 -10.952 1.00 -0.32 \ ATOM 208 N ILE A 361 -4.058 -4.723 -4.907 1.00 -0.43 \ ATOM 209 CA ILE A 361 -4.812 -5.855 -4.352 1.00 -0.43 \ ATOM 210 C ILE A 361 -5.332 -5.466 -2.981 1.00 -0.43 \ ATOM 211 O ILE A 361 -6.408 -5.887 -2.546 1.00 -0.43 \ ATOM 212 CB ILE A 361 -3.954 -7.106 -4.216 1.00 -0.43 \ ATOM 213 CG1 ILE A 361 -3.438 -7.572 -5.568 1.00 -0.43 \ ATOM 214 CG2 ILE A 361 -4.733 -8.232 -3.550 1.00 -0.43 \ ATOM 215 CD1 ILE A 361 -2.377 -8.623 -5.376 1.00 -0.43 \ ATOM 216 N HIS A 362 -4.563 -4.624 -2.311 1.00 1.92 \ ATOM 217 CA HIS A 362 -4.901 -4.230 -0.943 1.00 1.92 \ ATOM 218 C HIS A 362 -5.794 -3.008 -0.915 1.00 1.92 \ ATOM 219 O HIS A 362 -6.655 -2.882 -0.042 1.00 1.92 \ ATOM 220 CB HIS A 362 -3.638 -3.950 -0.139 1.00 1.92 \ ATOM 221 CG HIS A 362 -2.682 -5.097 -0.098 1.00 1.92 \ ATOM 222 ND1 HIS A 362 -2.983 -6.301 0.507 1.00 1.92 \ ATOM 223 CD2 HIS A 362 -1.419 -5.213 -0.566 1.00 1.92 \ ATOM 224 CE1 HIS A 362 -1.945 -7.111 0.403 1.00 1.92 \ ATOM 225 NE2 HIS A 362 -0.987 -6.478 -0.255 1.00 1.92 \ ATOM 226 N THR A 363 -5.561 -2.081 -1.839 1.00 0.45 \ ATOM 227 CA THR A 363 -6.348 -0.857 -1.868 1.00 0.45 \ ATOM 228 C THR A 363 -7.689 -1.099 -2.537 1.00 0.45 \ ATOM 229 O THR A 363 -8.640 -0.335 -2.321 1.00 0.45 \ ATOM 230 CB THR A 363 -5.632 0.281 -2.605 1.00 0.45 \ ATOM 231 OG1 THR A 363 -5.435 -0.104 -3.968 1.00 0.45 \ ATOM 232 CG2 THR A 363 -4.287 0.572 -1.965 1.00 0.45 \ ATOM 233 N GLY A 364 -7.762 -2.154 -3.349 1.00 1.14 \ ATOM 234 CA GLY A 364 -8.980 -2.498 -4.055 1.00 1.14 \ ATOM 235 C GLY A 364 -9.192 -1.614 -5.261 1.00 1.14 \ ATOM 236 O GLY A 364 -10.253 -1.661 -5.892 1.00 1.14 \ ATOM 237 N GLN A 365 -8.178 -0.811 -5.588 1.00 -1.00 \ ATOM 238 CA GLN A 365 -8.276 0.143 -6.688 1.00 -1.00 \ ATOM 239 C GLN A 365 -8.435 -0.619 -7.984 1.00 -1.00 \ ATOM 240 O GLN A 365 -7.634 -1.492 -8.300 1.00 -1.00 \ ATOM 241 CB GLN A 365 -7.037 1.052 -6.757 1.00 -1.00 \ ATOM 242 CG GLN A 365 -7.188 2.254 -7.711 1.00 -1.00 \ ATOM 243 CD GLN A 365 -5.858 2.888 -8.129 1.00 -1.00 \ ATOM 244 OE1 GLN A 365 -4.775 2.374 -7.820 1.00 -1.00 \ ATOM 245 NE2 GLN A 365 -5.939 4.004 -8.857 1.00 -1.00 \ """, "e4r2aA2_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e4r2aA2_csv", state=0, origin=1) cmd.zoom("e4r2aA2_csv", animate=-1)