cmd.read_pdbstr("""\ ATOM 1 N VAL y 18 -11.625 -46.699 12.351 1.00 -1.50 \ ATOM 2 CA VAL y 18 -12.451 -45.451 12.389 1.00 -1.50 \ ATOM 3 C VAL y 18 -13.152 -45.286 13.744 1.00 -1.50 \ ATOM 4 O VAL y 18 -13.209 -44.178 14.286 1.00 -1.50 \ ATOM 5 CB VAL y 18 -13.490 -45.400 11.233 1.00 -1.50 \ ATOM 6 CG1 VAL y 18 -14.123 -44.016 11.143 1.00 -1.50 \ ATOM 7 CG2 VAL y 18 -12.842 -45.774 9.896 1.00 -1.50 \ ATOM 8 N ILE y 19 -13.675 -46.390 14.282 1.00 0.64 \ ATOM 9 CA ILE y 19 -14.321 -46.411 15.605 1.00 0.64 \ ATOM 10 C ILE y 19 -13.319 -46.052 16.716 1.00 0.64 \ ATOM 11 O ILE y 19 -13.662 -45.337 17.666 1.00 0.64 \ ATOM 12 CB ILE y 19 -14.998 -47.788 15.897 1.00 0.64 \ ATOM 13 CG1 ILE y 19 -16.005 -48.137 14.794 1.00 0.64 \ ATOM 14 CG2 ILE y 19 -15.683 -47.794 17.275 1.00 0.64 \ ATOM 15 CD1 ILE y 19 -16.214 -49.629 14.589 1.00 0.64 \ ATOM 16 N ALA y 20 -12.086 -46.539 16.577 1.00 0.64 \ ATOM 17 CA ALA y 20 -11.019 -46.263 17.536 1.00 0.64 \ ATOM 18 C ALA y 20 -10.624 -44.782 17.562 1.00 0.64 \ ATOM 19 O ALA y 20 -10.338 -44.235 18.629 1.00 0.64 \ ATOM 20 CB ALA y 20 -9.808 -47.138 17.247 1.00 0.64 \ ATOM 21 N GLN y 21 -10.619 -44.146 16.390 1.00 0.64 \ ATOM 22 CA GLN y 21 -10.246 -42.729 16.254 1.00 0.64 \ ATOM 23 C GLN y 21 -11.295 -41.768 16.821 1.00 0.64 \ ATOM 24 O GLN y 21 -10.946 -40.726 17.392 1.00 0.64 \ ATOM 25 CB GLN y 21 -9.953 -42.384 14.788 1.00 0.64 \ ATOM 26 CG GLN y 21 -8.556 -42.773 14.322 1.00 0.64 \ ATOM 27 CD GLN y 21 -8.481 -43.086 12.837 1.00 0.64 \ ATOM 28 OE1 GLN y 21 -9.499 -43.155 12.147 1.00 0.64 \ ATOM 29 NE2 GLN y 21 -7.267 -43.292 12.341 1.00 0.64 \ ATOM 30 N LEU y 22 -12.570 -42.120 16.656 1.00 0.64 \ ATOM 31 CA LEU y 22 -13.679 -41.299 17.154 1.00 0.64 \ ATOM 32 C LEU y 22 -13.882 -41.429 18.668 1.00 0.64 \ ATOM 33 O LEU y 22 -14.410 -40.512 19.305 1.00 0.64 \ ATOM 34 CB LEU y 22 -14.975 -41.608 16.390 1.00 0.64 \ ATOM 35 CG LEU y 22 -15.048 -41.139 14.929 1.00 0.64 \ ATOM 36 CD1 LEU y 22 -15.866 -42.110 14.086 1.00 0.64 \ ATOM 37 CD2 LEU y 22 -15.591 -39.716 14.811 1.00 0.64 \ ATOM 38 N THR y 23 -13.458 -42.559 19.235 1.00 0.64 \ ATOM 39 CA THR y 23 -13.487 -42.765 20.688 1.00 0.64 \ ATOM 40 C THR y 23 -12.409 -41.920 21.388 1.00 0.64 \ ATOM 41 O THR y 23 -12.653 -41.354 22.460 1.00 0.64 \ ATOM 42 CB THR y 23 -13.305 -44.261 21.059 1.00 0.64 \ ATOM 43 OG1 THR y 23 -14.132 -45.070 20.215 1.00 0.64 \ ATOM 44 CG2 THR y 23 -13.678 -44.513 22.517 1.00 0.64 \ ATOM 45 N MET y 24 -11.226 -41.842 20.775 1.00 0.64 \ ATOM 46 CA MET y 24 -10.107 -41.078 21.328 1.00 0.64 \ ATOM 47 C MET y 24 -10.455 -39.596 21.427 1.00 0.64 \ ATOM 48 O MET y 24 -10.362 -39.010 22.511 1.00 0.64 \ ATOM 49 CB MET y 24 -8.825 -41.274 20.502 1.00 0.64 \ ATOM 50 CG MET y 24 -8.189 -42.666 20.575 1.00 0.64 \ ATOM 51 SD MET y 24 -8.174 -43.434 22.216 1.00 0.64 \ ATOM 52 CE MET y 24 -9.553 -44.580 22.078 1.00 0.64 \ ATOM 53 N ILE y 25 -10.875 -39.009 20.304 1.00 -1.50 \ ATOM 54 CA ILE y 25 -11.262 -37.588 20.251 1.00 -1.50 \ ATOM 55 C ILE y 25 -12.499 -37.293 21.116 1.00 -1.50 \ ATOM 56 O ILE y 25 -12.762 -36.138 21.450 1.00 -1.50 \ ATOM 57 CB ILE y 25 -11.434 -37.061 18.774 1.00 -1.50 \ ATOM 58 CG1 ILE y 25 -11.589 -35.528 18.721 1.00 -1.50 \ ATOM 59 CG2 ILE y 25 -12.601 -37.751 18.065 1.00 -1.50 \ ATOM 60 CD1 ILE y 25 -10.332 -34.726 19.063 1.00 -1.50 \ ATOM 61 N ALA y 26 -13.242 -38.339 21.481 1.00 0.64 \ ATOM 62 CA ALA y 26 -14.363 -38.203 22.408 1.00 0.64 \ ATOM 63 C ALA y 26 -13.879 -38.009 23.849 1.00 0.64 \ ATOM 64 O ALA y 26 -14.336 -37.087 24.530 1.00 0.64 \ ATOM 65 CB ALA y 26 -15.309 -39.391 22.301 1.00 0.64 \ ATOM 66 N MET y 27 -12.956 -38.862 24.301 1.00 -1.50 \ ATOM 67 CA MET y 27 -12.347 -38.717 25.631 1.00 -1.50 \ ATOM 68 C MET y 27 -11.493 -37.457 25.729 1.00 -1.50 \ ATOM 69 O MET y 27 -11.574 -36.716 26.713 1.00 -1.50 \ ATOM 70 CB MET y 27 -11.478 -39.922 25.991 1.00 -1.50 \ ATOM 71 CG MET y 27 -12.175 -41.000 26.806 1.00 -1.50 \ ATOM 72 SD MET y 27 -12.516 -42.465 25.818 1.00 -1.50 \ ATOM 73 CE MET y 27 -10.859 -43.033 25.415 1.00 -1.50 \ ATOM 74 N ILE y 28 -10.662 -37.238 24.712 1.00 0.64 \ ATOM 75 CA ILE y 28 -9.837 -36.040 24.624 1.00 0.64 \ ATOM 76 C ILE y 28 -10.721 -34.795 24.512 1.00 0.64 \ ATOM 77 O ILE y 28 -10.470 -33.795 25.179 1.00 0.64 \ ATOM 78 CB ILE y 28 -8.841 -36.131 23.441 1.00 0.64 \ ATOM 79 CG1 ILE y 28 -7.775 -37.189 23.731 1.00 0.64 \ ATOM 80 CG2 ILE y 28 -8.194 -34.780 23.160 1.00 0.64 \ ATOM 81 CD1 ILE y 28 -7.061 -37.716 22.503 1.00 0.64 \ ATOM 82 N GLY y 29 -11.767 -34.878 23.690 1.00 -1.50 \ ATOM 83 CA GLY y 29 -12.679 -33.756 23.464 1.00 -1.50 \ ATOM 84 C GLY y 29 -13.445 -33.329 24.703 1.00 -1.50 \ ATOM 85 O GLY y 29 -13.638 -32.136 24.940 1.00 -1.50 \ ATOM 86 N ILE y 30 -13.870 -34.307 25.500 1.00 0.64 \ ATOM 87 CA ILE y 30 -14.642 -34.039 26.711 1.00 0.64 \ ATOM 88 C ILE y 30 -13.764 -33.531 27.871 1.00 0.64 \ ATOM 89 O ILE y 30 -14.251 -32.822 28.746 1.00 0.64 \ ATOM 90 CB ILE y 30 -15.486 -35.283 27.138 1.00 0.64 \ ATOM 91 CG1 ILE y 30 -16.766 -34.868 27.873 1.00 0.64 \ ATOM 92 CG2 ILE y 30 -14.658 -36.260 27.974 1.00 0.64 \ ATOM 93 CD1 ILE y 30 -17.859 -34.310 26.969 1.00 0.64 \ ATOM 94 N ALA y 31 -12.477 -33.884 27.862 1.00 0.64 \ ATOM 95 CA ALA y 31 -11.568 -33.540 28.961 1.00 0.64 \ ATOM 96 C ALA y 31 -11.654 -32.066 29.383 1.00 0.64 \ ATOM 97 O ALA y 31 -11.868 -31.770 30.559 1.00 0.64 \ ATOM 98 CB ALA y 31 -10.134 -33.930 28.622 1.00 0.64 \ ATOM 99 N GLY y 32 -11.509 -31.154 28.422 1.00 0.64 \ ATOM 100 CA GLY y 32 -11.611 -29.717 28.688 1.00 0.64 \ ATOM 101 C GLY y 32 -12.916 -29.279 29.334 1.00 0.64 \ ATOM 102 O GLY y 32 -12.899 -28.685 30.410 1.00 0.64 \ ATOM 103 N PRO y 33 -14.060 -29.549 28.673 1.00 0.64 \ ATOM 104 CA PRO y 33 -15.363 -29.218 29.257 1.00 0.64 \ ATOM 105 C PRO y 33 -15.637 -29.912 30.599 1.00 0.64 \ ATOM 106 O PRO y 33 -16.361 -29.358 31.426 1.00 0.64 \ ATOM 107 CB PRO y 33 -16.357 -29.692 28.190 1.00 0.64 \ ATOM 108 CG PRO y 33 -15.593 -29.581 26.910 1.00 0.64 \ ATOM 109 CD PRO y 33 -14.186 -29.965 27.264 1.00 0.64 \ ATOM 110 N MET y 34 -15.061 -31.097 30.809 1.00 -1.50 \ ATOM 111 CA MET y 34 -15.181 -31.811 32.085 1.00 -1.50 \ ATOM 112 C MET y 34 -14.480 -31.058 33.223 1.00 -1.50 \ ATOM 113 O MET y 34 -15.034 -30.936 34.316 1.00 -1.50 \ ATOM 114 CB MET y 34 -14.639 -33.245 31.967 1.00 -1.50 \ ATOM 115 CG MET y 34 -14.996 -34.184 33.139 1.00 -1.50 \ ATOM 116 SD MET y 34 -16.778 -34.329 33.479 1.00 -1.50 \ ATOM 117 CE MET y 34 -17.448 -34.896 31.903 1.00 -1.50 \ ATOM 118 N ILE y 35 -13.274 -30.555 32.950 1.00 -1.50 \ ATOM 119 CA ILE y 35 -12.516 -29.740 33.908 1.00 -1.50 \ ATOM 120 C ILE y 35 -13.346 -28.549 34.390 1.00 -1.50 \ ATOM 121 O ILE y 35 -13.450 -28.301 35.596 1.00 -1.50 \ ATOM 122 CB ILE y 35 -11.165 -29.241 33.319 1.00 -1.50 \ ATOM 123 CG1 ILE y 35 -10.203 -30.414 33.084 1.00 -1.50 \ ATOM 124 CG2 ILE y 35 -10.508 -28.188 34.241 1.00 -1.50 \ ATOM 125 CD1 ILE y 35 -8.961 -30.058 32.245 1.00 -1.50 \ ATOM 126 N ILE y 36 -13.952 -27.835 33.443 1.00 0.64 \ ATOM 127 CA ILE y 36 -14.766 -26.662 33.749 1.00 0.64 \ ATOM 128 C ILE y 36 -15.996 -27.059 34.558 1.00 0.64 \ ATOM 129 O ILE y 36 -16.325 -26.405 35.550 1.00 0.64 \ ATOM 130 CB ILE y 36 -15.200 -25.897 32.457 1.00 0.64 \ ATOM 131 CG1 ILE y 36 -13.988 -25.559 31.567 1.00 0.64 \ ATOM 132 CG2 ILE y 36 -16.027 -24.651 32.798 1.00 0.64 \ ATOM 133 CD1 ILE y 36 -12.806 -24.905 32.287 1.00 0.64 \ ATOM 134 N PHE y 37 -16.655 -28.132 34.125 1.00 0.64 \ ATOM 135 CA PHE y 37 -17.859 -28.643 34.767 1.00 0.64 \ ATOM 136 C PHE y 37 -17.591 -29.060 36.210 1.00 0.64 \ ATOM 137 O PHE y 37 -18.317 -28.658 37.121 1.00 0.64 \ ATOM 138 CB PHE y 37 -18.425 -29.823 33.976 1.00 0.64 \ ATOM 139 CG PHE y 37 -19.695 -30.386 34.545 1.00 0.64 \ ATOM 140 CD1 PHE y 37 -20.925 -29.782 34.273 1.00 0.64 \ ATOM 141 CD2 PHE y 37 -19.668 -31.528 35.347 1.00 0.64 \ ATOM 142 CE1 PHE y 37 -22.106 -30.301 34.794 1.00 0.64 \ ATOM 143 CE2 PHE y 37 -20.846 -32.059 35.875 1.00 0.64 \ ATOM 144 CZ PHE y 37 -22.067 -31.445 35.597 1.00 0.64 \ ATOM 145 N LEU y 38 -16.550 -29.862 36.410 1.00 0.64 \ ATOM 146 CA LEU y 38 -16.168 -30.300 37.750 1.00 0.64 \ ATOM 147 C LEU y 38 -15.898 -29.106 38.662 1.00 0.64 \ ATOM 148 O LEU y 38 -16.359 -29.080 39.805 1.00 0.64 \ ATOM 149 CB LEU y 38 -14.962 -31.245 37.701 1.00 0.64 \ ATOM 150 CG LEU y 38 -15.245 -32.684 37.248 1.00 0.64 \ ATOM 151 CD1 LEU y 38 -13.949 -33.403 36.925 1.00 0.64 \ ATOM 152 CD2 LEU y 38 -16.047 -33.460 38.302 1.00 0.64 \ ATOM 153 N LEU y 39 -15.180 -28.111 38.144 1.00 0.64 \ ATOM 154 CA LEU y 39 -14.898 -26.895 38.900 1.00 0.64 \ ATOM 155 C LEU y 39 -16.137 -26.042 39.209 1.00 0.64 \ ATOM 156 O LEU y 39 -16.246 -25.482 40.299 1.00 0.64 \ ATOM 157 CB LEU y 39 -13.812 -26.068 38.222 1.00 0.64 \ ATOM 158 CG LEU y 39 -12.392 -26.604 38.413 1.00 0.64 \ ATOM 159 CD1 LEU y 39 -11.409 -25.856 37.527 1.00 0.64 \ ATOM 160 CD2 LEU y 39 -11.963 -26.538 39.878 1.00 0.64 \ ATOM 161 N ALA y 40 -17.066 -25.955 38.257 1.00 0.64 \ ATOM 162 CA ALA y 40 -18.301 -25.191 38.449 1.00 0.64 \ ATOM 163 C ALA y 40 -19.209 -25.822 39.511 1.00 0.64 \ ATOM 164 O ALA y 40 -19.842 -25.114 40.293 1.00 0.64 \ ATOM 165 CB ALA y 40 -19.049 -25.038 37.133 1.00 0.64 \ ATOM 166 N VAL y 41 -19.265 -27.151 39.520 1.00 -1.50 \ ATOM 167 CA VAL y 41 -20.035 -27.914 40.502 1.00 -1.50 \ ATOM 168 C VAL y 41 -19.459 -27.714 41.911 1.00 -1.50 \ ATOM 169 O VAL y 41 -20.205 -27.581 42.884 1.00 -1.50 \ ATOM 170 CB VAL y 41 -20.089 -29.424 40.111 1.00 -1.50 \ ATOM 171 CG1 VAL y 41 -20.565 -30.300 41.275 1.00 -1.50 \ ATOM 172 CG2 VAL y 41 -20.987 -29.625 38.891 1.00 -1.50 \ ATOM 173 N ARG y 42 -18.136 -27.655 42.002 1.00 0.64 \ ATOM 174 CA ARG y 42 -17.445 -27.562 43.285 1.00 0.64 \ ATOM 175 C ARG y 42 -17.143 -26.125 43.727 1.00 0.64 \ ATOM 176 O ARG y 42 -16.385 -25.916 44.678 1.00 0.64 \ ATOM 177 CB ARG y 42 -16.156 -28.383 43.228 1.00 0.64 \ ATOM 178 CG ARG y 42 -16.397 -29.891 43.206 1.00 0.64 \ ATOM 179 CD ARG y 42 -15.422 -30.599 42.277 1.00 0.64 \ ATOM 180 NE ARG y 42 -14.036 -30.495 42.726 1.00 0.64 \ ATOM 181 CZ ARG y 42 -13.268 -31.537 43.026 1.00 0.64 \ ATOM 182 NH1 ARG y 42 -13.742 -32.773 42.916 1.00 0.64 \ ATOM 183 NH2 ARG y 42 -12.020 -31.343 43.428 1.00 0.64 \ ATOM 184 N ARG y 43 -17.745 -25.150 43.044 1.00 -1.50 \ ATOM 185 CA ARG y 43 -17.509 -23.719 43.294 1.00 -1.50 \ ATOM 186 C ARG y 43 -16.018 -23.381 43.261 1.00 -1.50 \ ATOM 187 O ARG y 43 -15.512 -22.640 44.113 1.00 -1.50 \ ATOM 188 CB ARG y 43 -18.142 -23.267 44.622 1.00 -1.50 \ ATOM 189 CG ARG y 43 -19.672 -23.218 44.641 1.00 -1.50 \ ATOM 190 CD ARG y 43 -20.163 -22.764 46.020 1.00 -1.50 \ ATOM 191 NE ARG y 43 -21.613 -22.889 46.185 1.00 -1.50 \ ATOM 192 CZ ARG y 43 -22.264 -22.720 47.338 1.00 -1.50 \ ATOM 193 NH1 ARG y 43 -21.605 -22.419 48.454 1.00 -1.50 \ ATOM 194 NH2 ARG y 43 -23.584 -22.856 47.380 1.00 -1.50 \ ATOM 195 N GLY y 44 -15.317 -23.936 42.276 1.00 0.64 \ ATOM 196 CA GLY y 44 -13.877 -23.734 42.139 1.00 0.64 \ ATOM 197 C GLY y 44 -13.505 -22.337 41.677 1.00 0.64 \ ATOM 198 O GLY y 44 -14.370 -21.523 41.359 1.00 0.64 \ ATOM 199 N ASN y 45 -12.207 -22.068 41.633 1.00 -1.50 \ ATOM 200 CA ASN y 45 -11.700 -20.748 41.291 1.00 -1.50 \ ATOM 201 C ASN y 45 -11.615 -20.525 39.771 1.00 -1.50 \ ATOM 202 O ASN y 45 -10.531 -20.360 39.209 1.00 -1.50 \ ATOM 203 CB ASN y 45 -10.348 -20.518 41.973 1.00 -1.50 \ ATOM 204 CG ASN y 45 -9.879 -19.076 41.881 1.00 -1.50 \ ATOM 205 OD1 ASN y 45 -10.677 -18.148 41.750 1.00 -1.50 \ ATOM 206 ND2 ASN y 45 -8.571 -18.883 41.952 1.00 -1.50 \ ATOM 207 N LEU y 46 -12.775 -20.530 39.120 1.00 0.64 \ ATOM 208 CA LEU y 46 -12.861 -20.246 37.688 1.00 0.64 \ ATOM 209 C LEU y 46 -12.666 -18.754 37.391 1.00 0.64 \ ATOM 210 O LEU y 46 -12.283 -18.370 36.284 1.00 0.64 \ ATOM 211 CB LEU y 46 -14.205 -20.724 37.123 1.00 0.64 \ ATOM 212 CG LEU y 46 -14.486 -22.228 37.048 1.00 0.64 \ ATOM 213 CD1 LEU y 46 -15.920 -22.475 36.598 1.00 0.64 \ ATOM 214 CD2 LEU y 46 -13.512 -22.940 36.121 1.00 0.64 \ ATOM 215 OXT LEU y 46 -12.889 -17.892 38.245 1.00 0.64 \ """, "e4rvyy1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e4rvyy1_csv", state=0, origin=1) cmd.zoom("e4rvyy1_csv", animate=-1)