cmd.read_pdbstr("""\ ATOM 1 N PHE D 1 16.296 10.390 -3.757 0.60 -1.00 \ ATOM 2 CA PHE D 1 15.083 11.232 -3.997 0.60 -1.00 \ ATOM 3 C PHE D 1 14.799 11.472 -5.469 0.60 -1.00 \ ATOM 4 O PHE D 1 14.161 12.485 -5.835 0.60 -1.00 \ ATOM 5 CB PHE D 1 15.264 12.609 -3.358 0.60 -1.00 \ ATOM 6 CG PHE D 1 15.798 12.567 -1.977 0.60 -1.00 \ ATOM 7 CD1 PHE D 1 15.615 11.455 -1.166 0.60 -1.00 \ ATOM 8 CD2 PHE D 1 16.468 13.645 -1.481 0.60 -1.00 \ ATOM 9 CE1 PHE D 1 16.114 11.426 0.098 0.60 -1.00 \ ATOM 10 CE2 PHE D 1 16.963 13.616 -0.210 0.60 -1.00 \ ATOM 11 CZ PHE D 1 16.782 12.510 0.585 0.60 -1.00 \ ATOM 12 N VAL D 2 15.238 10.500 -6.289 0.50 -1.00 \ ATOM 13 CA VAL D 2 15.506 10.635 -7.745 0.50 -1.00 \ ATOM 14 C VAL D 2 14.205 10.660 -8.565 0.50 -1.00 \ ATOM 15 O VAL D 2 13.133 10.732 -7.958 0.50 -1.00 \ ATOM 16 CB VAL D 2 16.392 9.453 -8.213 0.50 -1.00 \ ATOM 17 CG1 VAL D 2 17.458 9.921 -9.207 0.50 -1.00 \ ATOM 18 CG2 VAL D 2 17.048 8.788 -7.011 0.50 -1.00 \ ATOM 19 N ASN D 3 14.261 10.584 -9.908 1.00 -0.48 \ ATOM 20 CA ASN D 3 12.983 10.647 -10.685 1.00 -0.48 \ ATOM 21 C ASN D 3 12.422 9.338 -11.310 1.00 -0.48 \ ATOM 22 O ASN D 3 13.067 8.697 -12.155 1.00 -0.48 \ ATOM 23 CB ASN D 3 13.183 11.576 -11.836 1.00 -0.48 \ ATOM 24 CG ASN D 3 13.869 12.839 -11.434 1.00 -0.48 \ ATOM 25 OD1 ASN D 3 13.777 13.255 -10.299 1.00 -0.48 \ ATOM 26 ND2 ASN D 3 14.576 13.451 -12.371 1.00 -0.48 \ ATOM 27 N GLN D 4 11.160 9.030 -10.958 1.00 0.23 \ ATOM 28 CA GLN D 4 10.400 7.810 -11.367 1.00 0.23 \ ATOM 29 C GLN D 4 8.936 8.268 -11.677 1.00 0.23 \ ATOM 30 O GLN D 4 8.622 9.393 -11.312 1.00 0.23 \ ATOM 31 CB GLN D 4 10.314 6.832 -10.170 1.00 0.23 \ ATOM 32 CG GLN D 4 11.183 7.193 -8.952 1.00 0.23 \ ATOM 33 CD GLN D 4 10.690 6.632 -7.606 1.00 0.23 \ ATOM 34 OE1 GLN D 4 10.116 5.509 -7.514 1.00 0.23 \ ATOM 35 NE2 GLN D 4 10.952 7.415 -6.534 1.00 0.23 \ ATOM 36 N HIS D 5 8.092 7.451 -12.313 1.00 -0.03 \ ATOM 37 CA HIS D 5 6.654 7.778 -12.502 1.00 -0.03 \ ATOM 38 C HIS D 5 5.877 7.353 -11.256 1.00 -0.03 \ ATOM 39 O HIS D 5 6.020 6.227 -10.744 1.00 -0.03 \ ATOM 40 CB HIS D 5 5.964 7.147 -13.707 1.00 -0.03 \ ATOM 41 CG HIS D 5 6.607 7.431 -15.033 1.00 -0.03 \ ATOM 42 ND1 HIS D 5 6.146 8.398 -15.883 1.00 -0.03 \ ATOM 43 CD2 HIS D 5 7.579 6.779 -15.698 1.00 -0.03 \ ATOM 44 CE1 HIS D 5 6.881 8.402 -16.981 1.00 -0.03 \ ATOM 45 NE2 HIS D 5 7.788 7.454 -16.869 1.00 -0.03 \ ATOM 46 N LEU D 6 5.029 8.246 -10.793 1.00 1.17 \ ATOM 47 CA LEU D 6 4.189 8.011 -9.591 1.00 1.17 \ ATOM 48 C LEU D 6 2.780 8.360 -9.940 1.00 1.17 \ ATOM 49 O LEU D 6 2.488 9.517 -10.246 1.00 1.17 \ ATOM 50 CB LEU D 6 4.644 8.898 -8.444 1.00 1.17 \ ATOM 51 CG LEU D 6 6.024 8.606 -7.875 1.00 1.17 \ ATOM 52 CD1 LEU D 6 6.626 9.782 -7.123 1.00 1.17 \ ATOM 53 CD2 LEU D 6 5.935 7.336 -7.069 1.00 1.17 \ ATOM 54 N CYS D 7 1.906 7.363 -9.913 1.00 1.69 \ ATOM 55 CA CYS D 7 0.575 7.560 -10.340 1.00 1.69 \ ATOM 56 C CYS D 7 -0.412 7.082 -9.310 1.00 1.69 \ ATOM 57 O CYS D 7 -0.138 6.145 -8.546 1.00 1.69 \ ATOM 58 CB CYS D 7 0.312 6.786 -11.646 1.00 1.69 \ ATOM 59 SG CYS D 7 1.394 7.299 -12.996 1.00 1.69 \ ATOM 60 N GLY D 8 -1.545 7.735 -9.276 1.00 0.76 \ ATOM 61 CA GLY D 8 -2.640 7.266 -8.431 1.00 0.76 \ ATOM 62 C GLY D 8 -2.333 7.142 -6.968 1.00 0.76 \ ATOM 63 O GLY D 8 -1.805 8.052 -6.337 1.00 0.76 \ ATOM 64 N SER D 9 -2.706 6.016 -6.403 1.00 -0.47 \ ATOM 65 CA SER D 9 -2.446 5.818 -4.997 1.00 -0.47 \ ATOM 66 C SER D 9 -0.945 5.889 -4.685 1.00 -0.47 \ ATOM 67 O SER D 9 -0.567 6.283 -3.581 1.00 -0.47 \ ATOM 68 CB SER D 9 -3.080 4.542 -4.515 1.00 -0.47 \ ATOM 69 OG SER D 9 -2.493 3.488 -5.147 1.00 -0.47 \ ATOM 70 N HIS D 10 -0.063 5.481 -5.607 1.00 -0.23 \ ATOM 71 CA HIS D 10 1.347 5.653 -5.385 1.00 -0.23 \ ATOM 72 C HIS D 10 1.835 7.103 -5.261 1.00 -0.23 \ ATOM 73 O HIS D 10 2.731 7.418 -4.480 1.00 -0.23 \ ATOM 74 CB HIS D 10 2.061 4.958 -6.530 1.00 -0.23 \ ATOM 75 CG HIS D 10 1.686 3.518 -6.637 1.00 -0.23 \ ATOM 76 ND1 HIS D 10 1.964 2.609 -5.629 1.00 -0.23 \ ATOM 77 CD2 HIS D 10 0.995 2.864 -7.574 1.00 -0.23 \ ATOM 78 CE1 HIS D 10 1.490 1.429 -5.986 1.00 -0.23 \ ATOM 79 NE2 HIS D 10 0.918 1.565 -7.171 1.00 -0.23 \ ATOM 80 N LEU D 11 1.230 7.971 -6.056 1.00 1.69 \ ATOM 81 CA LEU D 11 1.523 9.394 -6.012 1.00 1.69 \ ATOM 82 C LEU D 11 1.052 9.965 -4.664 1.00 1.69 \ ATOM 83 O LEU D 11 1.779 10.707 -3.987 1.00 1.69 \ ATOM 84 CB LEU D 11 0.866 10.063 -7.191 1.00 1.69 \ ATOM 85 CG LEU D 11 1.020 11.560 -7.376 1.00 1.69 \ ATOM 86 CD1 LEU D 11 2.506 11.946 -7.224 1.00 1.69 \ ATOM 87 CD2 LEU D 11 0.367 12.020 -8.645 1.00 1.69 \ ATOM 88 N VAL D 12 -0.137 9.603 -4.217 1.00 0.76 \ ATOM 89 CA VAL D 12 -0.528 10.144 -2.945 1.00 0.76 \ ATOM 90 C VAL D 12 0.280 9.603 -1.748 1.00 0.76 \ ATOM 91 O VAL D 12 0.522 10.364 -0.786 1.00 0.76 \ ATOM 92 CB VAL D 12 -2.055 10.090 -2.717 1.00 0.76 \ ATOM 93 CG1 VAL D 12 -2.810 10.863 -3.785 1.00 0.76 \ ATOM 94 CG2 VAL D 12 -2.532 8.691 -2.659 1.00 0.76 \ ATOM 95 N GLU D 13 0.727 8.326 -1.808 1.00 0.64 \ ATOM 96 CA GLU D 13 1.651 7.761 -0.807 1.00 0.64 \ ATOM 97 C GLU D 13 2.932 8.606 -0.732 1.00 0.64 \ ATOM 98 O GLU D 13 3.434 8.902 0.337 1.00 0.64 \ ATOM 99 CB GLU D 13 2.039 6.313 -1.128 1.00 0.64 \ ATOM 100 CG GLU D 13 0.895 5.340 -0.880 1.00 0.64 \ ATOM 101 CD GLU D 13 0.777 4.894 0.558 1.00 0.64 \ ATOM 102 OE1 GLU D 13 1.686 5.284 1.381 1.00 0.64 \ ATOM 103 OE2 GLU D 13 -0.246 4.169 0.850 1.00 0.64 \ ATOM 104 N ALA D 14 3.423 8.999 -1.892 1.00 0.02 \ ATOM 105 CA ALA D 14 4.651 9.762 -2.001 1.00 0.02 \ ATOM 106 C ALA D 14 4.435 11.136 -1.408 1.00 0.02 \ ATOM 107 O ALA D 14 5.310 11.637 -0.743 1.00 0.02 \ ATOM 108 CB ALA D 14 5.090 9.865 -3.446 1.00 0.02 \ ATOM 109 N LEU D 15 3.342 11.817 -1.746 1.00 1.69 \ ATOM 110 CA LEU D 15 2.993 13.107 -1.094 1.00 1.69 \ ATOM 111 C LEU D 15 2.915 13.025 0.391 1.00 1.69 \ ATOM 112 O LEU D 15 3.383 13.918 1.124 1.00 1.69 \ ATOM 113 CB LEU D 15 1.648 13.631 -1.560 1.00 1.69 \ ATOM 114 CG LEU D 15 1.630 14.158 -2.976 1.00 1.69 \ ATOM 115 CD1 LEU D 15 0.214 14.357 -3.529 1.00 1.69 \ ATOM 116 CD2 LEU D 15 2.477 15.433 -3.117 1.00 1.69 \ ATOM 117 N TYR D 16 2.315 11.951 0.881 1.00 -0.21 \ ATOM 118 CA TYR D 16 2.222 11.759 2.290 1.00 -0.21 \ ATOM 119 C TYR D 16 3.624 11.638 2.862 1.00 -0.21 \ ATOM 120 O TYR D 16 3.921 12.204 3.926 1.00 -0.21 \ ATOM 121 CB TYR D 16 1.395 10.478 2.585 1.00 -0.21 \ ATOM 122 CG TYR D 16 1.393 10.124 4.042 1.00 -0.21 \ ATOM 123 CD1 TYR D 16 0.671 10.871 4.954 1.00 -0.21 \ ATOM 124 CD2 TYR D 16 2.212 9.152 4.513 1.00 -0.21 \ ATOM 125 CE1 TYR D 16 0.732 10.582 6.289 1.00 -0.21 \ ATOM 126 CE2 TYR D 16 2.301 8.876 5.862 1.00 -0.21 \ ATOM 127 CZ TYR D 16 1.538 9.598 6.732 1.00 -0.21 \ ATOM 128 OH TYR D 16 1.581 9.337 8.102 1.00 -0.21 \ ATOM 129 N LEU D 17 4.469 10.834 2.206 1.00 -0.24 \ ATOM 130 CA LEU D 17 5.848 10.681 2.696 1.00 -0.24 \ ATOM 131 C LEU D 17 6.646 12.011 2.785 1.00 -0.24 \ ATOM 132 O LEU D 17 7.364 12.289 3.742 1.00 -0.24 \ ATOM 133 CB LEU D 17 6.566 9.710 1.801 1.00 -0.24 \ ATOM 134 CG LEU D 17 8.010 9.399 2.160 1.00 -0.24 \ ATOM 135 CD1 LEU D 17 7.994 8.237 3.128 1.00 -0.24 \ ATOM 136 CD2 LEU D 17 8.834 9.089 0.921 1.00 -0.24 \ ATOM 137 N VAL D 18 6.557 12.826 1.761 0.50 0.30 \ ATOM 138 CA VAL D 18 7.366 14.059 1.719 0.50 0.30 \ ATOM 139 C VAL D 18 6.756 15.157 2.574 0.50 0.30 \ ATOM 140 O VAL D 18 7.485 15.903 3.232 0.50 0.30 \ ATOM 141 CB VAL D 18 7.641 14.521 0.254 0.50 0.30 \ ATOM 142 CG1 VAL D 18 8.533 13.490 -0.427 0.50 0.30 \ ATOM 143 CG2 VAL D 18 6.357 14.793 -0.541 0.50 0.30 \ ATOM 144 N CYS D 19 5.420 15.233 2.620 1.00 1.69 \ ATOM 145 CA CYS D 19 4.759 16.364 3.300 1.00 1.69 \ ATOM 146 C CYS D 19 4.417 16.062 4.750 1.00 1.69 \ ATOM 147 O CYS D 19 4.466 16.965 5.583 1.00 1.69 \ ATOM 148 CB CYS D 19 3.484 16.803 2.545 1.00 1.69 \ ATOM 149 SG CYS D 19 3.747 17.287 0.861 1.00 1.69 \ ATOM 150 N GLY D 20 3.943 14.836 5.028 1.00 -0.12 \ ATOM 151 CA GLY D 20 3.601 14.474 6.372 1.00 -0.12 \ ATOM 152 C GLY D 20 2.695 15.450 7.078 1.00 -0.12 \ ATOM 153 O GLY D 20 1.655 15.809 6.561 1.00 -0.12 \ ATOM 154 N GLU D 21 3.100 15.878 8.292 1.00 0.18 \ ATOM 155 CA GLU D 21 2.287 16.751 9.166 1.00 0.18 \ ATOM 156 C GLU D 21 1.995 18.100 8.530 1.00 0.18 \ ATOM 157 O GLU D 21 1.052 18.778 8.940 1.00 0.18 \ ATOM 158 CB GLU D 21 3.075 17.013 10.466 1.00 0.18 \ ATOM 159 CG GLU D 21 4.433 17.651 10.126 1.00 0.18 \ ATOM 160 CD GLU D 21 5.575 17.427 11.100 1.00 0.18 \ ATOM 161 OE1 GLU D 21 5.601 18.157 12.119 1.00 0.18 \ ATOM 162 OE2 GLU D 21 6.469 16.594 10.813 1.00 0.18 \ ATOM 163 N ARG D 22 2.785 18.477 7.506 1.00 -0.58 \ ATOM 164 CA ARG D 22 2.517 19.730 6.756 1.00 -0.58 \ ATOM 165 C ARG D 22 1.149 19.665 6.053 1.00 -0.58 \ ATOM 166 O ARG D 22 0.521 20.708 5.852 1.00 -0.58 \ ATOM 167 CB ARG D 22 3.618 20.050 5.753 1.00 -0.58 \ ATOM 168 CG ARG D 22 4.987 20.280 6.353 1.00 -0.58 \ ATOM 169 CD ARG D 22 6.010 20.446 5.251 1.00 -0.58 \ ATOM 170 NE ARG D 22 5.730 21.663 4.466 1.00 -0.58 \ ATOM 171 CZ ARG D 22 6.326 22.001 3.312 1.00 -0.58 \ ATOM 172 NH1 ARG D 22 5.967 23.135 2.703 1.00 -0.58 \ ATOM 173 NH2 ARG D 22 7.278 21.254 2.766 1.00 -0.58 \ ATOM 174 N GLY D 23 0.719 18.448 5.685 1.00 1.69 \ ATOM 175 CA GLY D 23 -0.438 18.243 4.836 1.00 1.69 \ ATOM 176 C GLY D 23 -0.081 18.449 3.389 1.00 1.69 \ ATOM 177 O GLY D 23 1.030 18.893 3.048 1.00 1.69 \ ATOM 178 N PHE D 24 -1.019 18.116 2.523 1.00 1.16 \ ATOM 179 CA PHE D 24 -0.829 18.306 1.085 1.00 1.16 \ ATOM 180 C PHE D 24 -2.185 18.386 0.405 1.00 1.16 \ ATOM 181 O PHE D 24 -3.217 18.123 1.002 1.00 1.16 \ ATOM 182 CB PHE D 24 0.065 17.201 0.530 1.00 1.16 \ ATOM 183 CG PHE D 24 -0.559 15.814 0.589 1.00 1.16 \ ATOM 184 CD1 PHE D 24 -1.438 15.375 -0.399 1.00 1.16 \ ATOM 185 CD2 PHE D 24 -0.262 14.965 1.639 1.00 1.16 \ ATOM 186 CE1 PHE D 24 -1.991 14.137 -0.325 1.00 1.16 \ ATOM 187 CE2 PHE D 24 -0.824 13.714 1.715 1.00 1.16 \ ATOM 188 CZ PHE D 24 -1.688 13.308 0.752 1.00 1.16 \ ATOM 189 N PHE D 25 -2.159 18.733 -0.872 1.00 0.51 \ ATOM 190 CA PHE D 25 -3.368 18.620 -1.628 1.00 0.51 \ ATOM 191 C PHE D 25 -3.001 17.766 -2.834 1.00 0.51 \ ATOM 192 O PHE D 25 -1.883 17.878 -3.407 1.00 0.51 \ ATOM 193 CB PHE D 25 -3.907 20.024 -2.077 1.00 0.51 \ ATOM 194 CG PHE D 25 -2.888 20.858 -2.823 1.00 0.51 \ ATOM 195 CD1 PHE D 25 -1.963 21.636 -2.118 1.00 0.51 \ ATOM 196 CD2 PHE D 25 -2.844 20.878 -4.245 1.00 0.51 \ ATOM 197 CE1 PHE D 25 -1.026 22.390 -2.772 1.00 0.51 \ ATOM 198 CE2 PHE D 25 -1.866 21.621 -4.891 1.00 0.51 \ ATOM 199 CZ PHE D 25 -0.978 22.387 -4.156 1.00 0.51 \ ATOM 200 N TYR D 26 -3.972 16.976 -3.259 1.00 -0.23 \ ATOM 201 CA TYR D 26 -3.866 16.126 -4.438 1.00 -0.23 \ ATOM 202 C TYR D 26 -5.004 16.547 -5.357 1.00 -0.23 \ ATOM 203 O TYR D 26 -6.180 16.312 -5.042 1.00 -0.23 \ ATOM 204 CB TYR D 26 -4.002 14.622 -4.084 1.00 -0.23 \ ATOM 205 CG TYR D 26 -4.082 13.742 -5.309 1.00 -0.23 \ ATOM 206 CD1 TYR D 26 -3.051 13.758 -6.267 1.00 -0.23 \ ATOM 207 CD2 TYR D 26 -5.186 12.931 -5.528 1.00 -0.23 \ ATOM 208 CE1 TYR D 26 -3.110 12.948 -7.398 1.00 -0.23 \ ATOM 209 CE2 TYR D 26 -5.279 12.142 -6.650 1.00 -0.23 \ ATOM 210 CZ TYR D 26 -4.234 12.153 -7.567 1.00 -0.23 \ ATOM 211 OH TYR D 26 -4.309 11.399 -8.681 1.00 -0.23 \ ATOM 212 N THR D 27 -4.673 17.268 -6.403 1.00 -0.98 \ ATOM 213 CA THR D 27 -5.722 17.869 -7.271 1.00 -0.98 \ ATOM 214 C THR D 27 -5.404 17.515 -8.707 1.00 -0.98 \ ATOM 215 O THR D 27 -4.825 18.287 -9.455 1.00 -0.98 \ ATOM 216 CB THR D 27 -5.907 19.400 -6.986 1.00 -0.98 \ ATOM 217 OG1 THR D 27 -4.643 20.055 -6.927 1.00 -0.98 \ ATOM 218 CG2 THR D 27 -6.506 19.609 -5.662 1.00 -0.98 \ ATOM 219 N PRO D 28 -5.798 16.303 -9.098 1.00 -0.78 \ ATOM 220 CA PRO D 28 -5.422 15.841 -10.418 1.00 -0.78 \ ATOM 221 C PRO D 28 -6.093 16.575 -11.599 1.00 -0.78 \ ATOM 222 O PRO D 28 -5.509 16.587 -12.695 1.00 -0.78 \ ATOM 223 CB PRO D 28 -5.740 14.317 -10.349 1.00 -0.78 \ ATOM 224 CG PRO D 28 -6.755 14.181 -9.298 1.00 -0.78 \ ATOM 225 CD PRO D 28 -6.480 15.270 -8.311 1.00 -0.78 \ ATOM 226 N LYS D 29 -7.235 17.229 -11.401 0.50 -0.90 \ ATOM 227 CA LYS D 29 -7.788 18.069 -12.465 0.50 -0.90 \ ATOM 228 C LYS D 29 -6.938 19.299 -12.738 0.50 -0.90 \ ATOM 229 O LYS D 29 -6.960 19.815 -13.858 0.50 -0.90 \ ATOM 230 CB LYS D 29 -9.233 18.494 -12.186 0.50 -0.90 \ ATOM 231 CG LYS D 29 -9.389 19.515 -11.093 0.50 -0.90 \ ATOM 232 CD LYS D 29 -9.074 20.923 -11.563 0.50 -0.90 \ ATOM 233 CE LYS D 29 -9.453 21.933 -10.499 0.50 -0.90 \ ATOM 234 NZ LYS D 29 -10.937 22.077 -10.583 0.50 -0.90 \ ATOM 235 N THR D 30 -6.160 19.753 -11.750 0.60 -1.45 \ ATOM 236 CA THR D 30 -5.357 20.955 -11.947 0.60 -1.45 \ ATOM 237 C THR D 30 -4.298 20.711 -13.002 0.60 -1.45 \ ATOM 238 O THR D 30 -3.687 19.660 -13.036 0.60 -1.45 \ ATOM 239 CB THR D 30 -4.777 21.415 -10.611 0.60 -1.45 \ ATOM 240 OG1 THR D 30 -5.862 21.699 -9.715 0.60 -1.45 \ ATOM 241 CG2 THR D 30 -3.899 22.640 -10.793 0.60 -1.45 \ """, "e4rxwD1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e4rxwD1_csv", state=0, origin=1) cmd.zoom("e4rxwD1_csv", animate=-1)