cmd.read_pdbstr("""\ ATOM 1 N LEU A 7 52.920 -3.606 16.889 1.00 0.58 \ ATOM 2 CA LEU A 7 51.734 -3.893 17.762 1.00 0.58 \ ATOM 3 C LEU A 7 51.861 -5.305 18.349 1.00 0.58 \ ATOM 4 O LEU A 7 52.398 -6.207 17.706 1.00 0.58 \ ATOM 5 CB LEU A 7 50.475 -3.818 16.911 1.00 0.58 \ ATOM 6 CG LEU A 7 49.953 -2.477 16.337 1.00 0.58 \ ATOM 7 CD1 LEU A 7 48.897 -2.658 15.247 1.00 0.58 \ ATOM 8 CD2 LEU A 7 49.423 -1.632 17.486 1.00 0.58 \ ATOM 9 N PRO A 8 51.335 -5.533 19.559 1.00 0.41 \ ATOM 10 CA PRO A 8 51.434 -6.908 20.117 1.00 0.41 \ ATOM 11 C PRO A 8 50.795 -8.019 19.223 1.00 0.41 \ ATOM 12 O PRO A 8 50.074 -7.723 18.234 1.00 0.41 \ ATOM 13 CB PRO A 8 50.682 -6.814 21.474 1.00 0.41 \ ATOM 14 CG PRO A 8 50.527 -5.334 21.737 1.00 0.41 \ ATOM 15 CD PRO A 8 50.496 -4.649 20.398 1.00 0.41 \ ATOM 16 N PRO A 9 51.035 -9.301 19.587 1.00 -0.79 \ ATOM 17 CA PRO A 9 50.619 -10.392 18.689 1.00 -0.79 \ ATOM 18 C PRO A 9 49.127 -10.403 18.355 1.00 -0.79 \ ATOM 19 O PRO A 9 48.239 -10.515 19.294 1.00 -0.79 \ ATOM 20 CB PRO A 9 50.990 -11.675 19.508 1.00 -0.79 \ ATOM 21 CG PRO A 9 52.207 -11.219 20.305 1.00 -0.79 \ ATOM 22 CD PRO A 9 51.865 -9.788 20.714 1.00 -0.79 \ ATOM 23 N GLY A 10 48.850 -10.358 17.055 1.00 -0.48 \ ATOM 24 CA GLY A 10 47.477 -10.574 16.616 1.00 -0.48 \ ATOM 25 C GLY A 10 46.743 -9.271 16.330 1.00 -0.48 \ ATOM 26 O GLY A 10 45.707 -9.289 15.775 1.00 -0.48 \ ATOM 27 N TRP A 11 47.364 -8.150 16.666 1.00 2.12 \ ATOM 28 CA TRP A 11 46.707 -6.801 16.555 1.00 2.12 \ ATOM 29 C TRP A 11 46.931 -6.179 15.176 1.00 2.12 \ ATOM 30 O TRP A 11 48.040 -6.277 14.600 1.00 2.12 \ ATOM 31 CB TRP A 11 47.234 -5.875 17.666 1.00 2.12 \ ATOM 32 CG TRP A 11 46.667 -6.106 19.012 1.00 2.12 \ ATOM 33 CD1 TRP A 11 47.238 -6.779 20.018 1.00 2.12 \ ATOM 34 CD2 TRP A 11 45.363 -5.779 19.449 1.00 2.12 \ ATOM 35 NE1 TRP A 11 46.423 -6.823 21.139 1.00 2.12 \ ATOM 36 CE2 TRP A 11 45.243 -6.225 20.798 1.00 2.12 \ ATOM 37 CE3 TRP A 11 44.282 -5.083 18.851 1.00 2.12 \ ATOM 38 CZ2 TRP A 11 44.120 -6.013 21.560 1.00 2.12 \ ATOM 39 CZ3 TRP A 11 43.168 -4.919 19.605 1.00 2.12 \ ATOM 40 CH2 TRP A 11 43.096 -5.368 20.960 1.00 2.12 \ ATOM 41 N GLU A 12 45.886 -5.573 14.601 1.00 -0.42 \ ATOM 42 CA GLU A 12 45.922 -4.914 13.276 1.00 -0.42 \ ATOM 43 C GLU A 12 45.127 -3.580 13.309 1.00 -0.42 \ ATOM 44 O GLU A 12 44.251 -3.434 14.142 1.00 -0.42 \ ATOM 45 CB GLU A 12 45.232 -5.782 12.208 1.00 -0.42 \ ATOM 46 CG GLU A 12 45.865 -7.158 11.928 1.00 -0.42 \ ATOM 47 CD GLU A 12 47.345 -7.156 11.432 1.00 -0.42 \ ATOM 48 OE1 GLU A 12 47.925 -6.064 11.119 1.00 -0.42 \ ATOM 49 OE2 GLU A 12 47.940 -8.274 11.355 1.00 -0.42 \ ATOM 50 N LYS A 13 45.394 -2.663 12.372 1.00 -0.52 \ ATOM 51 CA LYS A 13 44.786 -1.297 12.352 1.00 -0.52 \ ATOM 52 C LYS A 13 43.650 -1.351 11.362 1.00 -0.52 \ ATOM 53 O LYS A 13 43.743 -2.079 10.361 1.00 -0.52 \ ATOM 54 CB LYS A 13 45.880 -0.287 11.931 1.00 -0.52 \ ATOM 55 CG LYS A 13 45.864 1.082 12.606 1.00 -0.52 \ ATOM 56 CD LYS A 13 46.937 2.032 12.031 1.00 -0.52 \ ATOM 57 CE LYS A 13 46.734 2.298 10.530 1.00 -0.52 \ ATOM 58 NZ LYS A 13 46.901 3.735 10.119 1.00 -0.52 \ ATOM 59 N ALA A 14 42.527 -0.669 11.629 1.00 -0.61 \ ATOM 60 CA ALA A 14 41.362 -0.671 10.745 1.00 -0.61 \ ATOM 61 C ALA A 14 40.774 0.753 10.842 1.00 -0.61 \ ATOM 62 O ALA A 14 41.295 1.556 11.637 1.00 -0.61 \ ATOM 63 CB ALA A 14 40.341 -1.698 11.196 1.00 -0.61 \ ATOM 64 N MET A 15 39.738 1.035 10.049 1.00 -0.78 \ ATOM 65 CA MET A 15 39.004 2.309 10.125 1.00 -0.78 \ ATOM 66 C MET A 15 37.594 2.022 10.319 1.00 -0.78 \ ATOM 67 O MET A 15 36.998 1.137 9.624 1.00 -0.78 \ ATOM 68 CB MET A 15 39.152 3.070 8.791 1.00 -0.78 \ ATOM 69 CG MET A 15 40.597 3.333 8.443 1.00 -0.78 \ ATOM 70 SD MET A 15 40.731 4.544 7.098 1.00 -0.78 \ ATOM 71 CE MET A 15 41.770 5.739 7.966 1.00 -0.78 \ ATOM 72 N SER A 16 36.996 2.764 11.226 1.00 -0.03 \ ATOM 73 CA SER A 16 35.618 2.586 11.536 1.00 -0.03 \ ATOM 74 C SER A 16 34.762 2.868 10.257 1.00 -0.03 \ ATOM 75 O SER A 16 35.009 3.901 9.604 1.00 -0.03 \ ATOM 76 CB SER A 16 35.249 3.630 12.602 1.00 -0.03 \ ATOM 77 OG SER A 16 33.838 3.664 12.728 1.00 -0.03 \ ATOM 78 N ARG A 17 33.801 1.995 9.955 1.00 -0.74 \ ATOM 79 CA ARG A 17 32.819 2.222 8.849 1.00 -0.74 \ ATOM 80 C ARG A 17 31.885 3.355 9.104 1.00 -0.74 \ ATOM 81 O ARG A 17 31.310 3.959 8.194 1.00 -0.74 \ ATOM 82 CB ARG A 17 31.903 1.031 8.682 1.00 -0.74 \ ATOM 83 CG ARG A 17 32.656 -0.084 8.091 1.00 -0.74 \ ATOM 84 CD ARG A 17 32.966 0.206 6.648 1.00 -0.74 \ ATOM 85 NE ARG A 17 34.055 -0.687 6.315 1.00 -0.74 \ ATOM 86 CZ ARG A 17 33.899 -1.938 5.854 1.00 -0.74 \ ATOM 87 NH1 ARG A 17 32.692 -2.476 5.613 1.00 -0.74 \ ATOM 88 NH2 ARG A 17 35.002 -2.663 5.681 1.00 -0.74 \ ATOM 89 N SER A 18 31.643 3.631 10.363 1.00 -0.74 \ ATOM 90 CA SER A 18 30.651 4.676 10.589 1.00 -0.74 \ ATOM 91 C SER A 18 31.300 6.051 10.826 1.00 -0.74 \ ATOM 92 O SER A 18 30.729 7.036 10.430 1.00 -0.74 \ ATOM 93 CB SER A 18 29.565 4.233 11.586 1.00 -0.74 \ ATOM 94 OG SER A 18 30.136 3.998 12.854 1.00 -0.74 \ ATOM 95 N SER A 19 32.539 6.118 11.311 1.00 -1.00 \ ATOM 96 CA SER A 19 33.144 7.411 11.627 1.00 -1.00 \ ATOM 97 C SER A 19 34.428 7.685 10.916 1.00 -1.00 \ ATOM 98 O SER A 19 34.848 8.828 10.874 1.00 -1.00 \ ATOM 99 CB SER A 19 33.381 7.524 13.132 1.00 -1.00 \ ATOM 100 OG SER A 19 34.487 6.734 13.505 1.00 -1.00 \ ATOM 101 N GLY A 20 35.072 6.648 10.342 1.00 -0.06 \ ATOM 102 CA GLY A 20 36.371 6.798 9.671 1.00 -0.06 \ ATOM 103 C GLY A 20 37.633 6.751 10.589 1.00 -0.06 \ ATOM 104 O GLY A 20 38.798 6.733 10.124 1.00 -0.06 \ ATOM 105 N ARG A 21 37.398 6.817 11.899 1.00 -0.71 \ ATOM 106 CA ARG A 21 38.498 6.879 12.826 1.00 -0.71 \ ATOM 107 C ARG A 21 39.218 5.525 12.895 1.00 -0.71 \ ATOM 108 O ARG A 21 38.573 4.493 12.788 1.00 -0.71 \ ATOM 109 CB ARG A 21 37.979 7.256 14.217 1.00 -0.71 \ ATOM 110 CG ARG A 21 38.459 8.649 14.651 1.00 -0.71 \ ATOM 111 CD ARG A 21 37.662 9.130 15.858 1.00 -0.71 \ ATOM 112 NE ARG A 21 37.810 8.256 17.007 1.00 -0.71 \ ATOM 113 CZ ARG A 21 36.818 7.679 17.694 1.00 -0.71 \ ATOM 114 NH1 ARG A 21 35.535 7.865 17.338 1.00 -0.71 \ ATOM 115 NH2 ARG A 21 37.126 6.993 18.816 1.00 -0.71 \ ATOM 116 N VAL A 22 40.524 5.588 13.092 1.00 -0.70 \ ATOM 117 CA VAL A 22 41.359 4.404 13.192 1.00 -0.70 \ ATOM 118 C VAL A 22 40.942 3.643 14.516 1.00 -0.70 \ ATOM 119 O VAL A 22 40.613 4.256 15.552 1.00 -0.70 \ ATOM 120 CB VAL A 22 42.817 4.858 13.153 1.00 -0.70 \ ATOM 121 CG1 VAL A 22 43.743 3.845 13.784 1.00 -0.70 \ ATOM 122 CG2 VAL A 22 43.196 5.149 11.688 1.00 -0.70 \ ATOM 123 N TYR A 23 40.894 2.308 14.440 1.00 1.43 \ ATOM 124 CA TYR A 23 40.734 1.512 15.693 1.00 1.43 \ ATOM 125 C TYR A 23 41.660 0.298 15.500 1.00 1.43 \ ATOM 126 O TYR A 23 42.346 0.205 14.504 1.00 1.43 \ ATOM 127 CB TYR A 23 39.329 1.032 15.927 1.00 1.43 \ ATOM 128 CG TYR A 23 38.750 0.048 14.956 1.00 1.43 \ ATOM 129 CD1 TYR A 23 38.220 0.508 13.740 1.00 1.43 \ ATOM 130 CD2 TYR A 23 38.625 -1.340 15.289 1.00 1.43 \ ATOM 131 CE1 TYR A 23 37.656 -0.390 12.847 1.00 1.43 \ ATOM 132 CE2 TYR A 23 38.047 -2.263 14.390 1.00 1.43 \ ATOM 133 CZ TYR A 23 37.544 -1.755 13.192 1.00 1.43 \ ATOM 134 OH TYR A 23 36.955 -2.593 12.282 1.00 1.43 \ ATOM 135 N TYR A 24 41.727 -0.550 16.506 1.00 1.92 \ ATOM 136 CA TYR A 24 42.662 -1.698 16.475 1.00 1.92 \ ATOM 137 C TYR A 24 41.803 -2.955 16.743 1.00 1.92 \ ATOM 138 O TYR A 24 40.876 -2.933 17.541 1.00 1.92 \ ATOM 139 CB TYR A 24 43.666 -1.522 17.586 1.00 1.92 \ ATOM 140 CG TYR A 24 44.485 -0.299 17.344 1.00 1.92 \ ATOM 141 CD1 TYR A 24 44.082 0.982 17.861 1.00 1.92 \ ATOM 142 CD2 TYR A 24 45.587 -0.388 16.508 1.00 1.92 \ ATOM 143 CE1 TYR A 24 44.818 2.115 17.559 1.00 1.92 \ ATOM 144 CE2 TYR A 24 46.378 0.724 16.223 1.00 1.92 \ ATOM 145 CZ TYR A 24 45.982 1.956 16.743 1.00 1.92 \ ATOM 146 OH TYR A 24 46.772 3.002 16.417 1.00 1.92 \ ATOM 147 N PHE A 25 42.101 -4.023 16.023 1.00 -0.07 \ ATOM 148 CA PHE A 25 41.404 -5.273 16.319 1.00 -0.07 \ ATOM 149 C PHE A 25 42.452 -6.388 16.271 1.00 -0.07 \ ATOM 150 O PHE A 25 43.534 -6.255 15.632 1.00 -0.07 \ ATOM 151 CB PHE A 25 40.267 -5.486 15.378 1.00 -0.07 \ ATOM 152 CG PHE A 25 40.717 -5.899 14.067 1.00 -0.07 \ ATOM 153 CD1 PHE A 25 41.212 -4.949 13.157 1.00 -0.07 \ ATOM 154 CD2 PHE A 25 40.739 -7.289 13.738 1.00 -0.07 \ ATOM 155 CE1 PHE A 25 41.683 -5.353 11.862 1.00 -0.07 \ ATOM 156 CE2 PHE A 25 41.221 -7.685 12.480 1.00 -0.07 \ ATOM 157 CZ PHE A 25 41.704 -6.734 11.541 1.00 -0.07 \ ATOM 158 N ASN A 26 42.116 -7.446 17.022 1.00 1.17 \ ATOM 159 CA ASN A 26 42.983 -8.640 17.202 1.00 1.17 \ ATOM 160 C ASN A 26 42.313 -9.869 16.593 1.00 1.17 \ ATOM 161 O ASN A 26 41.197 -10.221 16.925 1.00 1.17 \ ATOM 162 CB ASN A 26 43.257 -8.790 18.710 1.00 1.17 \ ATOM 163 CG ASN A 26 44.341 -9.835 18.941 1.00 1.17 \ ATOM 164 OD1 ASN A 26 44.153 -10.958 18.514 1.00 1.17 \ ATOM 165 ND2 ASN A 26 45.397 -9.471 19.583 1.00 1.17 \ ATOM 166 N HIS A 27 42.950 -10.483 15.586 1.00 -0.56 \ ATOM 167 CA HIS A 27 42.274 -11.523 14.825 1.00 -0.56 \ ATOM 168 C HIS A 27 42.443 -12.882 15.556 1.00 -0.56 \ ATOM 169 O HIS A 27 41.856 -13.867 15.137 1.00 -0.56 \ ATOM 170 CB HIS A 27 42.843 -11.648 13.367 1.00 -0.56 \ ATOM 171 CG HIS A 27 44.362 -11.753 13.299 1.00 -0.56 \ ATOM 172 ND1 HIS A 27 45.043 -12.936 13.506 1.00 -0.56 \ ATOM 173 CD2 HIS A 27 45.320 -10.822 13.006 1.00 -0.56 \ ATOM 174 CE1 HIS A 27 46.351 -12.732 13.379 1.00 -0.56 \ ATOM 175 NE2 HIS A 27 46.548 -11.454 13.103 1.00 -0.56 \ ATOM 176 N ILE A 28 43.169 -12.868 16.657 1.00 -0.85 \ ATOM 177 CA ILE A 28 43.230 -14.100 17.502 1.00 -0.85 \ ATOM 178 C ILE A 28 42.128 -14.078 18.598 1.00 -0.85 \ ATOM 179 O ILE A 28 41.496 -15.109 18.922 1.00 -0.85 \ ATOM 180 CB ILE A 28 44.616 -14.231 18.165 1.00 -0.85 \ ATOM 181 CG1 ILE A 28 45.716 -14.279 17.098 1.00 -0.85 \ ATOM 182 CG2 ILE A 28 44.635 -15.515 19.037 1.00 -0.85 \ ATOM 183 CD1 ILE A 28 47.057 -14.067 17.711 1.00 -0.85 \ """, "e4u85A2_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e4u85A2_csv", state=0, origin=1) cmd.zoom("e4u85A2_csv", animate=-1)