cmd.read_pdbstr("""\ ATOM 1 N VAL Y 18 21.079 307.504 361.717 1.00 -1.50 \ ATOM 2 CA VAL Y 18 20.090 307.202 360.684 1.00 -1.50 \ ATOM 3 C VAL Y 18 20.020 308.330 359.656 1.00 -1.50 \ ATOM 4 O VAL Y 18 20.359 308.147 358.484 1.00 -1.50 \ ATOM 5 CB VAL Y 18 18.689 306.972 361.292 1.00 -1.50 \ ATOM 6 CG1 VAL Y 18 17.710 306.513 360.222 1.00 -1.50 \ ATOM 7 CG2 VAL Y 18 18.757 305.971 362.447 1.00 -1.50 \ ATOM 8 N ILE Y 19 19.574 309.497 360.109 1.00 0.64 \ ATOM 9 CA ILE Y 19 19.593 310.707 359.296 1.00 0.64 \ ATOM 10 C ILE Y 19 21.038 311.168 359.122 1.00 0.64 \ ATOM 11 O ILE Y 19 21.383 311.835 358.143 1.00 0.64 \ ATOM 12 CB ILE Y 19 18.780 311.841 359.951 1.00 0.64 \ ATOM 13 CG1 ILE Y 19 17.729 311.263 360.901 1.00 0.64 \ ATOM 14 CG2 ILE Y 19 18.113 312.704 358.890 1.00 0.64 \ ATOM 15 CD1 ILE Y 19 17.071 312.301 361.788 1.00 0.64 \ ATOM 16 N ALA Y 20 21.870 310.818 360.098 1.00 0.64 \ ATOM 17 CA ALA Y 20 23.282 311.169 360.082 1.00 0.64 \ ATOM 18 C ALA Y 20 24.013 310.531 358.898 1.00 0.64 \ ATOM 19 O ALA Y 20 24.652 311.227 358.102 1.00 0.64 \ ATOM 20 CB ALA Y 20 23.920 310.763 361.393 1.00 0.64 \ ATOM 21 N GLN Y 21 23.910 309.208 358.792 1.00 0.64 \ ATOM 22 CA GLN Y 21 24.522 308.440 357.700 1.00 0.64 \ ATOM 23 C GLN Y 21 24.081 308.937 356.321 1.00 0.64 \ ATOM 24 O GLN Y 21 24.892 309.074 355.391 1.00 0.64 \ ATOM 25 CB GLN Y 21 24.186 306.952 357.858 1.00 0.64 \ ATOM 26 CG GLN Y 21 24.872 306.300 359.040 1.00 0.64 \ ATOM 27 CD GLN Y 21 24.145 305.072 359.537 1.00 0.64 \ ATOM 28 OE1 GLN Y 21 23.050 304.753 359.070 1.00 0.64 \ ATOM 29 NE2 GLN Y 21 24.741 304.385 360.508 1.00 0.64 \ ATOM 30 N LEU Y 22 22.781 309.193 356.205 1.00 0.64 \ ATOM 31 CA LEU Y 22 22.188 309.708 354.978 1.00 0.64 \ ATOM 32 C LEU Y 22 22.712 311.113 354.651 1.00 0.64 \ ATOM 33 O LEU Y 22 22.969 311.425 353.488 1.00 0.64 \ ATOM 34 CB LEU Y 22 20.657 309.687 355.080 1.00 0.64 \ ATOM 35 CG LEU Y 22 20.046 308.298 355.323 1.00 0.64 \ ATOM 36 CD1 LEU Y 22 18.543 308.388 355.519 1.00 0.64 \ ATOM 37 CD2 LEU Y 22 20.388 307.322 354.198 1.00 0.64 \ ATOM 38 N THR Y 23 22.880 311.947 355.677 1.00 0.64 \ ATOM 39 CA THR Y 23 23.451 313.285 355.507 1.00 0.64 \ ATOM 40 C THR Y 23 24.874 313.203 354.943 1.00 0.64 \ ATOM 41 O THR Y 23 25.218 313.868 353.945 1.00 0.64 \ ATOM 42 CB THR Y 23 23.502 314.046 356.852 1.00 0.64 \ ATOM 43 OG1 THR Y 23 22.214 314.011 357.481 1.00 0.64 \ ATOM 44 CG2 THR Y 23 23.925 315.494 356.635 1.00 0.64 \ ATOM 45 N MET Y 24 25.693 312.376 355.592 1.00 0.64 \ ATOM 46 CA MET Y 24 27.042 312.097 355.113 1.00 0.64 \ ATOM 47 C MET Y 24 27.032 311.680 353.647 1.00 0.64 \ ATOM 48 O MET Y 24 27.677 312.333 352.819 1.00 0.64 \ ATOM 49 CB MET Y 24 27.716 311.019 355.969 1.00 0.64 \ ATOM 50 CG MET Y 24 27.939 311.425 357.414 1.00 0.64 \ ATOM 51 SD MET Y 24 28.549 313.125 357.558 1.00 0.64 \ ATOM 52 CE MET Y 24 27.089 313.975 358.165 1.00 0.64 \ ATOM 53 N ILE Y 25 26.302 310.611 353.320 1.00 -1.50 \ ATOM 54 CA ILE Y 25 26.279 310.139 351.928 1.00 -1.50 \ ATOM 55 C ILE Y 25 25.713 311.201 350.967 1.00 -1.50 \ ATOM 56 O ILE Y 25 25.972 311.160 349.769 1.00 -1.50 \ ATOM 57 CB ILE Y 25 25.575 308.750 351.751 1.00 -1.50 \ ATOM 58 CG1 ILE Y 25 25.805 308.178 350.339 1.00 -1.50 \ ATOM 59 CG2 ILE Y 25 24.088 308.846 352.042 1.00 -1.50 \ ATOM 60 CD1 ILE Y 25 27.265 307.954 349.959 1.00 -1.50 \ ATOM 61 N ALA Y 26 24.956 312.157 351.499 1.00 0.64 \ ATOM 62 CA ALA Y 26 24.437 313.257 350.689 1.00 0.64 \ ATOM 63 C ALA Y 26 25.523 314.274 350.307 1.00 0.64 \ ATOM 64 O ALA Y 26 25.676 314.606 349.126 1.00 0.64 \ ATOM 65 CB ALA Y 26 23.281 313.946 351.402 1.00 0.64 \ ATOM 66 N MET Y 27 26.289 314.752 351.286 1.00 -1.50 \ ATOM 67 CA MET Y 27 27.395 315.671 350.972 1.00 -1.50 \ ATOM 68 C MET Y 27 28.488 314.979 350.151 1.00 -1.50 \ ATOM 69 O MET Y 27 28.930 315.485 349.109 1.00 -1.50 \ ATOM 70 CB MET Y 27 28.013 316.250 352.248 1.00 -1.50 \ ATOM 71 CG MET Y 27 27.087 317.126 353.091 1.00 -1.50 \ ATOM 72 SD MET Y 27 26.860 316.470 354.755 1.00 -1.50 \ ATOM 73 CE MET Y 27 28.562 316.258 355.276 1.00 -1.50 \ ATOM 74 N ILE Y 28 28.927 313.826 350.651 1.00 0.64 \ ATOM 75 CA ILE Y 28 29.928 313.011 349.986 1.00 0.64 \ ATOM 76 C ILE Y 28 29.487 312.679 348.566 1.00 0.64 \ ATOM 77 O ILE Y 28 30.268 312.789 347.623 1.00 0.64 \ ATOM 78 CB ILE Y 28 30.186 311.706 350.776 1.00 0.64 \ ATOM 79 CG1 ILE Y 28 30.979 312.005 352.047 1.00 0.64 \ ATOM 80 CG2 ILE Y 28 30.929 310.684 349.927 1.00 0.64 \ ATOM 81 CD1 ILE Y 28 31.127 310.807 352.967 1.00 0.64 \ ATOM 82 N GLY Y 29 28.226 312.292 348.419 1.00 -1.50 \ ATOM 83 CA GLY Y 29 27.680 311.888 347.133 1.00 -1.50 \ ATOM 84 C GLY Y 29 27.549 313.049 346.164 1.00 -1.50 \ ATOM 85 O GLY Y 29 27.674 312.884 344.944 1.00 -1.50 \ ATOM 86 N ILE Y 30 27.306 314.236 346.706 1.00 0.64 \ ATOM 87 CA ILE Y 30 27.174 315.418 345.871 1.00 0.64 \ ATOM 88 C ILE Y 30 28.552 315.899 345.410 1.00 0.64 \ ATOM 89 O ILE Y 30 28.682 316.470 344.327 1.00 0.64 \ ATOM 90 CB ILE Y 30 26.401 316.554 346.610 1.00 0.64 \ ATOM 91 CG1 ILE Y 30 25.122 316.929 345.859 1.00 0.64 \ ATOM 92 CG2 ILE Y 30 27.278 317.771 346.841 1.00 0.64 \ ATOM 93 CD1 ILE Y 30 23.982 315.954 346.079 1.00 0.64 \ ATOM 94 N ALA Y 31 29.579 315.631 346.218 1.00 0.64 \ ATOM 95 CA ALA Y 31 30.944 316.107 345.937 1.00 0.64 \ ATOM 96 C ALA Y 31 31.417 315.913 344.486 1.00 0.64 \ ATOM 97 O ALA Y 31 31.915 316.845 343.850 1.00 0.64 \ ATOM 98 CB ALA Y 31 31.935 315.465 346.907 1.00 0.64 \ ATOM 99 N GLY Y 32 31.251 314.702 343.973 1.00 0.64 \ ATOM 100 CA GLY Y 32 31.679 314.374 342.628 1.00 0.64 \ ATOM 101 C GLY Y 32 31.018 315.182 341.533 1.00 0.64 \ ATOM 102 O GLY Y 32 31.709 315.881 340.782 1.00 0.64 \ ATOM 103 N PRO Y 33 29.682 315.075 341.415 1.00 0.64 \ ATOM 104 CA PRO Y 33 28.949 315.829 340.389 1.00 0.64 \ ATOM 105 C PRO Y 33 29.147 317.336 340.517 1.00 0.64 \ ATOM 106 O PRO Y 33 29.116 318.046 339.507 1.00 0.64 \ ATOM 107 CB PRO Y 33 27.489 315.461 340.663 1.00 0.64 \ ATOM 108 CG PRO Y 33 27.570 314.072 341.272 1.00 0.64 \ ATOM 109 CD PRO Y 33 28.818 314.098 342.110 1.00 0.64 \ ATOM 110 N MET Y 34 29.364 317.808 341.741 1.00 -1.50 \ ATOM 111 CA MET Y 34 29.592 319.224 342.001 1.00 -1.50 \ ATOM 112 C MET Y 34 30.871 319.719 341.322 1.00 -1.50 \ ATOM 113 O MET Y 34 30.893 320.803 340.741 1.00 -1.50 \ ATOM 114 CB MET Y 34 29.630 319.493 343.514 1.00 -1.50 \ ATOM 115 CG MET Y 34 29.760 320.964 343.911 1.00 -1.50 \ ATOM 116 SD MET Y 34 28.519 322.044 343.148 1.00 -1.50 \ ATOM 117 CE MET Y 34 26.993 321.189 343.556 1.00 -1.50 \ ATOM 118 N ILE Y 35 31.924 318.911 341.379 1.00 -1.50 \ ATOM 119 CA ILE Y 35 33.177 319.229 340.697 1.00 -1.50 \ ATOM 120 C ILE Y 35 32.976 319.385 339.181 1.00 -1.50 \ ATOM 121 O ILE Y 35 33.421 320.360 338.582 1.00 -1.50 \ ATOM 122 CB ILE Y 35 34.266 318.154 340.989 1.00 -1.50 \ ATOM 123 CG1 ILE Y 35 34.639 318.155 342.484 1.00 -1.50 \ ATOM 124 CG2 ILE Y 35 35.503 318.360 340.092 1.00 -1.50 \ ATOM 125 CD1 ILE Y 35 35.392 316.912 342.947 1.00 -1.50 \ ATOM 126 N ILE Y 36 32.288 318.429 338.568 1.00 0.64 \ ATOM 127 CA ILE Y 36 32.032 318.484 337.135 1.00 0.64 \ ATOM 128 C ILE Y 36 31.225 319.734 336.791 1.00 0.64 \ ATOM 129 O ILE Y 36 31.529 320.447 335.834 1.00 0.64 \ ATOM 130 CB ILE Y 36 31.291 317.220 336.656 1.00 0.64 \ ATOM 131 CG1 ILE Y 36 32.073 315.957 337.052 1.00 0.64 \ ATOM 132 CG2 ILE Y 36 31.055 317.272 335.159 1.00 0.64 \ ATOM 133 CD1 ILE Y 36 33.540 315.970 336.611 1.00 0.64 \ ATOM 134 N PHE Y 37 30.216 320.009 337.607 1.00 0.64 \ ATOM 135 CA PHE Y 37 29.350 321.160 337.412 1.00 0.64 \ ATOM 136 C PHE Y 37 30.134 322.473 337.474 1.00 0.64 \ ATOM 137 O PHE Y 37 29.986 323.336 336.599 1.00 0.64 \ ATOM 138 CB PHE Y 37 28.243 321.159 338.463 1.00 0.64 \ ATOM 139 CG PHE Y 37 27.322 322.334 338.375 1.00 0.64 \ ATOM 140 CD1 PHE Y 37 26.379 322.415 337.367 1.00 0.64 \ ATOM 141 CD2 PHE Y 37 27.412 323.368 339.296 1.00 0.64 \ ATOM 142 CE1 PHE Y 37 25.530 323.500 337.282 1.00 0.64 \ ATOM 143 CE2 PHE Y 37 26.570 324.455 339.219 1.00 0.64 \ ATOM 144 CZ PHE Y 37 25.624 324.521 338.210 1.00 0.64 \ ATOM 145 N LEU Y 38 30.974 322.612 338.498 1.00 0.64 \ ATOM 146 CA LEU Y 38 31.744 323.838 338.696 1.00 0.64 \ ATOM 147 C LEU Y 38 32.661 324.137 337.515 1.00 0.64 \ ATOM 148 O LEU Y 38 32.797 325.295 337.106 1.00 0.64 \ ATOM 149 CB LEU Y 38 32.542 323.787 340.002 1.00 0.64 \ ATOM 150 CG LEU Y 38 31.662 323.845 341.250 1.00 0.64 \ ATOM 151 CD1 LEU Y 38 32.477 323.688 342.525 1.00 0.64 \ ATOM 152 CD2 LEU Y 38 30.859 325.138 341.268 1.00 0.64 \ ATOM 153 N LEU Y 39 33.291 323.092 336.985 1.00 0.64 \ ATOM 154 CA LEU Y 39 34.161 323.205 335.810 1.00 0.64 \ ATOM 155 C LEU Y 39 33.377 323.487 334.525 1.00 0.64 \ ATOM 156 O LEU Y 39 33.844 324.219 333.652 1.00 0.64 \ ATOM 157 CB LEU Y 39 35.017 321.940 335.641 1.00 0.64 \ ATOM 158 CG LEU Y 39 36.132 321.771 336.676 1.00 0.64 \ ATOM 159 CD1 LEU Y 39 36.681 320.349 336.678 1.00 0.64 \ ATOM 160 CD2 LEU Y 39 37.237 322.775 336.415 1.00 0.64 \ ATOM 161 N ALA Y 40 32.195 322.889 334.406 1.00 0.64 \ ATOM 162 CA ALA Y 40 31.334 323.122 333.258 1.00 0.64 \ ATOM 163 C ALA Y 40 30.883 324.582 333.194 1.00 0.64 \ ATOM 164 O ALA Y 40 30.800 325.171 332.119 1.00 0.64 \ ATOM 165 CB ALA Y 40 30.141 322.194 333.305 1.00 0.64 \ ATOM 166 N VAL Y 41 30.590 325.151 334.356 1.00 -1.50 \ ATOM 167 CA VAL Y 41 30.198 326.551 334.466 1.00 -1.50 \ ATOM 168 C VAL Y 41 31.373 327.481 334.144 1.00 -1.50 \ ATOM 169 O VAL Y 41 31.212 328.527 333.510 1.00 -1.50 \ ATOM 170 CB VAL Y 41 29.668 326.856 335.892 1.00 -1.50 \ ATOM 171 CG1 VAL Y 41 29.553 328.359 336.122 1.00 -1.50 \ ATOM 172 CG2 VAL Y 41 28.332 326.165 336.123 1.00 -1.50 \ ATOM 173 N ARG Y 42 32.559 327.084 334.585 1.00 0.64 \ ATOM 174 CA ARG Y 42 33.755 327.904 334.452 1.00 0.64 \ ATOM 175 C ARG Y 42 34.517 327.607 333.166 1.00 0.64 \ ATOM 176 O ARG Y 42 35.641 328.080 332.982 1.00 0.64 \ ATOM 177 CB ARG Y 42 34.652 327.721 335.681 1.00 0.64 \ ATOM 178 CG ARG Y 42 34.010 328.275 336.951 1.00 0.64 \ ATOM 179 CD ARG Y 42 34.533 327.620 338.220 1.00 0.64 \ ATOM 180 NE ARG Y 42 35.928 327.944 338.487 1.00 0.64 \ ATOM 181 CZ ARG Y 42 36.427 328.091 339.708 1.00 0.64 \ ATOM 182 NH1 ARG Y 42 35.637 327.945 340.762 1.00 0.64 \ ATOM 183 NH2 ARG Y 42 37.709 328.388 339.878 1.00 0.64 \ ATOM 184 N ARG Y 43 33.877 326.846 332.277 1.00 -1.50 \ ATOM 185 CA ARG Y 43 34.475 326.409 331.015 1.00 -1.50 \ ATOM 186 C ARG Y 43 35.883 325.857 331.239 1.00 -1.50 \ ATOM 187 O ARG Y 43 36.851 326.287 330.601 1.00 -1.50 \ ATOM 188 CB ARG Y 43 34.475 327.545 329.981 1.00 -1.50 \ ATOM 189 CG ARG Y 43 33.122 328.244 329.842 1.00 -1.50 \ ATOM 190 CD ARG Y 43 33.032 329.096 328.577 1.00 -1.50 \ ATOM 191 NE ARG Y 43 32.882 328.271 327.380 1.00 -1.50 \ ATOM 192 CZ ARG Y 43 32.812 328.745 326.140 1.00 -1.50 \ ATOM 193 NH1 ARG Y 43 32.877 330.053 325.920 1.00 -1.50 \ ATOM 194 NH2 ARG Y 43 32.678 327.909 325.118 1.00 -1.50 \ ATOM 195 N GLY Y 44 35.984 324.908 332.164 1.00 0.64 \ ATOM 196 CA GLY Y 44 37.266 324.364 332.567 1.00 0.64 \ ATOM 197 C GLY Y 44 37.703 323.194 331.711 1.00 0.64 \ ATOM 198 O GLY Y 44 37.033 322.825 330.749 1.00 0.64 \ ATOM 199 N ASN Y 45 38.824 322.593 332.085 1.00 -1.50 \ ATOM 200 CA ASN Y 45 39.470 321.605 331.240 1.00 -1.50 \ ATOM 201 C ASN Y 45 38.950 320.161 331.407 1.00 -1.50 \ ATOM 202 O ASN Y 45 39.730 319.232 331.624 1.00 -1.50 \ ATOM 203 CB ASN Y 45 40.987 321.681 331.435 1.00 -1.50 \ ATOM 204 CG ASN Y 45 41.753 320.993 330.319 1.00 -1.50 \ ATOM 205 OD1 ASN Y 45 41.192 320.683 329.264 1.00 -1.50 \ ATOM 206 ND2 ASN Y 45 43.039 320.745 330.548 1.00 -1.50 \ ATOM 207 N LEU Y 46 37.633 319.992 331.293 1.00 0.64 \ ATOM 208 CA LEU Y 46 36.992 318.671 331.263 1.00 0.64 \ ATOM 209 C LEU Y 46 37.401 317.841 330.054 1.00 0.64 \ ATOM 210 O LEU Y 46 37.242 316.606 330.041 1.00 0.64 \ ATOM 211 CB LEU Y 46 35.469 318.819 331.249 1.00 0.64 \ ATOM 212 CG LEU Y 46 34.851 319.424 332.510 1.00 0.64 \ ATOM 213 CD1 LEU Y 46 33.376 319.686 332.286 1.00 0.64 \ ATOM 214 CD2 LEU Y 46 35.067 318.506 333.713 1.00 0.64 \ ATOM 215 OXT LEU Y 46 37.882 318.393 329.063 1.00 0.64 \ """, "e4ub6Y1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e4ub6Y1_csv", state=0, origin=1) cmd.zoom("e4ub6Y1_csv", animate=-1)