cmd.read_pdbstr("""\ ATOM 1 N VAL y 18 -4.419 -52.694 19.200 1.00 -1.50 \ ATOM 2 CA VAL y 18 -5.302 -51.538 19.084 1.00 -1.50 \ ATOM 3 C VAL y 18 -6.182 -51.396 20.324 1.00 -1.50 \ ATOM 4 O VAL y 18 -6.402 -50.285 20.805 1.00 -1.50 \ ATOM 5 CB VAL y 18 -6.177 -51.607 17.816 1.00 -1.50 \ ATOM 6 CG1 VAL y 18 -7.080 -50.389 17.730 1.00 -1.50 \ ATOM 7 CG2 VAL y 18 -5.301 -51.694 16.581 1.00 -1.50 \ ATOM 8 N ILE y 19 -6.683 -52.521 20.833 1.00 0.64 \ ATOM 9 CA ILE y 19 -7.423 -52.532 22.094 1.00 0.64 \ ATOM 10 C ILE y 19 -6.461 -52.192 23.230 1.00 0.64 \ ATOM 11 O ILE y 19 -6.808 -51.475 24.181 1.00 0.64 \ ATOM 12 CB ILE y 19 -8.035 -53.921 22.374 1.00 0.64 \ ATOM 13 CG1 ILE y 19 -8.819 -54.423 21.162 1.00 0.64 \ ATOM 14 CG2 ILE y 19 -8.913 -53.885 23.617 1.00 0.64 \ ATOM 15 CD1 ILE y 19 -9.342 -55.832 21.328 1.00 0.64 \ ATOM 16 N ALA y 20 -5.242 -52.709 23.105 1.00 0.64 \ ATOM 17 CA ALA y 20 -4.174 -52.426 24.049 1.00 0.64 \ ATOM 18 C ALA y 20 -3.824 -50.944 23.993 1.00 0.64 \ ATOM 19 O ALA y 20 -3.671 -50.306 25.033 1.00 0.64 \ ATOM 20 CB ALA y 20 -2.954 -53.281 23.745 1.00 0.64 \ ATOM 21 N GLN y 21 -3.702 -50.409 22.776 1.00 0.64 \ ATOM 22 CA GLN y 21 -3.426 -48.984 22.558 1.00 0.64 \ ATOM 23 C GLN y 21 -4.470 -48.069 23.204 1.00 0.64 \ ATOM 24 O GLN y 21 -4.128 -47.151 23.961 1.00 0.64 \ ATOM 25 CB GLN y 21 -3.330 -48.680 21.056 1.00 0.64 \ ATOM 26 CG GLN y 21 -2.054 -49.174 20.409 1.00 0.64 \ ATOM 27 CD GLN y 21 -2.126 -49.189 18.895 1.00 0.64 \ ATOM 28 OE1 GLN y 21 -3.210 -49.178 18.310 1.00 0.64 \ ATOM 29 NE2 GLN y 21 -0.964 -49.207 18.251 1.00 0.64 \ ATOM 30 N LEU y 22 -5.740 -48.335 22.907 1.00 0.64 \ ATOM 31 CA LEU y 22 -6.840 -47.565 23.474 1.00 0.64 \ ATOM 32 C LEU y 22 -6.881 -47.684 25.001 1.00 0.64 \ ATOM 33 O LEU y 22 -7.170 -46.705 25.689 1.00 0.64 \ ATOM 34 CB LEU y 22 -8.180 -47.986 22.855 1.00 0.64 \ ATOM 35 CG LEU y 22 -8.315 -47.842 21.336 1.00 0.64 \ ATOM 36 CD1 LEU y 22 -9.604 -48.473 20.844 1.00 0.64 \ ATOM 37 CD2 LEU y 22 -8.252 -46.375 20.940 1.00 0.64 \ ATOM 38 N THR y 23 -6.588 -48.874 25.526 1.00 0.64 \ ATOM 39 CA THR y 23 -6.527 -49.064 26.977 1.00 0.64 \ ATOM 40 C THR y 23 -5.419 -48.211 27.597 1.00 0.64 \ ATOM 41 O THR y 23 -5.642 -47.516 28.590 1.00 0.64 \ ATOM 42 CB THR y 23 -6.283 -50.536 27.350 1.00 0.64 \ ATOM 43 OG1 THR y 23 -7.209 -51.366 26.639 1.00 0.64 \ ATOM 44 CG2 THR y 23 -6.459 -50.739 28.859 1.00 0.64 \ ATOM 45 N MET y 24 -4.228 -48.271 27.005 1.00 0.64 \ ATOM 46 CA MET y 24 -3.105 -47.458 27.455 1.00 0.64 \ ATOM 47 C MET y 24 -3.482 -45.980 27.466 1.00 0.64 \ ATOM 48 O MET y 24 -3.339 -45.309 28.492 1.00 0.64 \ ATOM 49 CB MET y 24 -1.864 -47.689 26.584 1.00 0.64 \ ATOM 50 CG MET y 24 -1.318 -49.107 26.638 1.00 0.64 \ ATOM 51 SD MET y 24 -1.324 -49.764 28.316 1.00 0.64 \ ATOM 52 CE MET y 24 -1.562 -51.512 28.003 1.00 0.64 \ ATOM 53 N ILE y 25 -3.982 -45.475 26.338 1.00 -1.50 \ ATOM 54 CA ILE y 25 -4.342 -44.058 26.265 1.00 -1.50 \ ATOM 55 C ILE y 25 -5.492 -43.716 27.225 1.00 -1.50 \ ATOM 56 O ILE y 25 -5.638 -42.569 27.642 1.00 -1.50 \ ATOM 57 CB ILE y 25 -4.646 -43.587 24.806 1.00 -1.50 \ ATOM 58 CG1 ILE y 25 -4.647 -42.056 24.709 1.00 -1.50 \ ATOM 59 CG2 ILE y 25 -5.957 -44.154 24.302 1.00 -1.50 \ ATOM 60 CD1 ILE y 25 -3.336 -41.409 25.089 1.00 -1.50 \ ATOM 61 N ALA y 26 -6.279 -44.719 27.604 1.00 0.64 \ ATOM 62 CA ALA y 26 -7.332 -44.526 28.601 1.00 0.64 \ ATOM 63 C ALA y 26 -6.770 -44.360 30.019 1.00 0.64 \ ATOM 64 O ALA y 26 -7.156 -43.439 30.736 1.00 0.64 \ ATOM 65 CB ALA y 26 -8.331 -45.671 28.556 1.00 0.64 \ ATOM 66 N MET y 27 -5.871 -45.253 30.424 1.00 -1.50 \ ATOM 67 CA MET y 27 -5.267 -45.174 31.757 1.00 -1.50 \ ATOM 68 C MET y 27 -4.420 -43.918 31.892 1.00 -1.50 \ ATOM 69 O MET y 27 -4.582 -43.127 32.828 1.00 -1.50 \ ATOM 70 CB MET y 27 -4.390 -46.397 32.025 1.00 -1.50 \ ATOM 71 CG MET y 27 -5.064 -47.733 31.760 1.00 -1.50 \ ATOM 72 SD MET y 27 -4.087 -49.108 32.401 1.00 -1.50 \ ATOM 73 CE MET y 27 -4.021 -48.700 34.149 1.00 -1.50 \ ATOM 74 N ILE y 28 -3.508 -43.756 30.942 1.00 0.64 \ ATOM 75 CA ILE y 28 -2.665 -42.573 30.854 1.00 0.64 \ ATOM 76 C ILE y 28 -3.519 -41.313 30.841 1.00 0.64 \ ATOM 77 O ILE y 28 -3.219 -40.342 31.530 1.00 0.64 \ ATOM 78 CB ILE y 28 -1.797 -42.639 29.582 1.00 0.64 \ ATOM 79 CG1 ILE y 28 -0.642 -43.629 29.783 1.00 0.64 \ ATOM 80 CG2 ILE y 28 -1.277 -41.262 29.187 1.00 0.64 \ ATOM 81 CD1 ILE y 28 0.157 -43.904 28.502 1.00 0.64 \ ATOM 82 N GLY y 29 -4.594 -41.337 30.059 1.00 -1.50 \ ATOM 83 CA GLY y 29 -5.464 -40.183 29.930 1.00 -1.50 \ ATOM 84 C GLY y 29 -6.261 -39.862 31.185 1.00 -1.50 \ ATOM 85 O GLY y 29 -6.592 -38.708 31.441 1.00 -1.50 \ ATOM 86 N ILE y 30 -6.581 -40.884 31.967 1.00 0.64 \ ATOM 87 CA ILE y 30 -7.364 -40.678 33.177 1.00 0.64 \ ATOM 88 C ILE y 30 -6.456 -40.233 34.317 1.00 0.64 \ ATOM 89 O ILE y 30 -6.908 -39.562 35.249 1.00 0.64 \ ATOM 90 CB ILE y 30 -8.165 -41.951 33.581 1.00 0.64 \ ATOM 91 CG1 ILE y 30 -9.477 -41.576 34.270 1.00 0.64 \ ATOM 92 CG2 ILE y 30 -7.337 -42.862 34.467 1.00 0.64 \ ATOM 93 CD1 ILE y 30 -10.390 -40.718 33.405 1.00 0.64 \ ATOM 94 N ALA y 31 -5.175 -40.595 34.216 1.00 0.64 \ ATOM 95 CA ALA y 31 -4.168 -40.282 35.236 1.00 0.64 \ ATOM 96 C ALA y 31 -4.140 -38.814 35.683 1.00 0.64 \ ATOM 97 O ALA y 31 -4.083 -38.516 36.879 1.00 0.64 \ ATOM 98 CB ALA y 31 -2.782 -40.701 34.741 1.00 0.64 \ ATOM 99 N GLY y 32 -4.175 -37.910 34.706 1.00 0.64 \ ATOM 100 CA GLY y 32 -4.122 -36.479 34.953 1.00 0.64 \ ATOM 101 C GLY y 32 -5.295 -35.923 35.740 1.00 0.64 \ ATOM 102 O GLY y 32 -5.096 -35.329 36.801 1.00 0.64 \ ATOM 103 N PRO y 33 -6.523 -36.080 35.212 1.00 0.64 \ ATOM 104 CA PRO y 33 -7.718 -35.617 35.928 1.00 0.64 \ ATOM 105 C PRO y 33 -7.877 -36.330 37.273 1.00 0.64 \ ATOM 106 O PRO y 33 -8.464 -35.786 38.215 1.00 0.64 \ ATOM 107 CB PRO y 33 -8.860 -35.987 34.979 1.00 0.64 \ ATOM 108 CG PRO y 33 -8.220 -35.958 33.607 1.00 0.64 \ ATOM 109 CD PRO y 33 -6.835 -36.503 33.832 1.00 0.64 \ ATOM 110 N MET y 34 -7.343 -37.542 37.356 1.00 -1.50 \ ATOM 111 CA MET y 34 -7.389 -38.302 38.597 1.00 -1.50 \ ATOM 112 C MET y 34 -6.578 -37.600 39.689 1.00 -1.50 \ ATOM 113 O MET y 34 -6.978 -37.601 40.853 1.00 -1.50 \ ATOM 114 CB MET y 34 -6.897 -39.738 38.383 1.00 -1.50 \ ATOM 115 CG MET y 34 -6.838 -40.587 39.649 1.00 -1.50 \ ATOM 116 SD MET y 34 -8.413 -40.706 40.518 1.00 -1.50 \ ATOM 117 CE MET y 34 -9.511 -41.248 39.209 1.00 -1.50 \ ATOM 118 N ILE y 35 -5.447 -37.002 39.318 1.00 -1.50 \ ATOM 119 CA ILE y 35 -4.634 -36.270 40.289 1.00 -1.50 \ ATOM 120 C ILE y 35 -5.416 -35.067 40.813 1.00 -1.50 \ ATOM 121 O ILE y 35 -5.446 -34.813 42.020 1.00 -1.50 \ ATOM 122 CB ILE y 35 -3.273 -35.826 39.704 1.00 -1.50 \ ATOM 123 CG1 ILE y 35 -2.376 -37.038 39.448 1.00 -1.50 \ ATOM 124 CG2 ILE y 35 -2.550 -34.895 40.659 1.00 -1.50 \ ATOM 125 CD1 ILE y 35 -1.236 -36.743 38.474 1.00 -1.50 \ ATOM 126 N ILE y 36 -6.067 -34.347 39.908 1.00 0.64 \ ATOM 127 CA ILE y 36 -6.881 -33.199 40.302 1.00 0.64 \ ATOM 128 C ILE y 36 -8.066 -33.614 41.189 1.00 0.64 \ ATOM 129 O ILE y 36 -8.339 -32.984 42.211 1.00 0.64 \ ATOM 130 CB ILE y 36 -7.402 -32.453 39.087 1.00 0.64 \ ATOM 131 CG1 ILE y 36 -6.250 -32.155 38.124 1.00 0.64 \ ATOM 132 CG2 ILE y 36 -8.077 -31.152 39.509 1.00 0.64 \ ATOM 133 CD1 ILE y 36 -5.136 -31.313 38.733 1.00 0.64 \ ATOM 134 N PHE y 37 -8.761 -34.677 40.797 1.00 0.64 \ ATOM 135 CA PHE y 37 -9.901 -35.181 41.565 1.00 0.64 \ ATOM 136 C PHE y 37 -9.510 -35.575 42.995 1.00 0.64 \ ATOM 137 O PHE y 37 -10.181 -35.189 43.955 1.00 0.64 \ ATOM 138 CB PHE y 37 -10.536 -36.382 40.847 1.00 0.64 \ ATOM 139 CG PHE y 37 -11.765 -36.919 41.531 1.00 0.64 \ ATOM 140 CD1 PHE y 37 -13.007 -36.350 41.294 1.00 0.64 \ ATOM 141 CD2 PHE y 37 -11.680 -37.986 42.416 1.00 0.64 \ ATOM 142 CE1 PHE y 37 -14.141 -36.839 41.922 1.00 0.64 \ ATOM 143 CE2 PHE y 37 -12.812 -38.478 43.049 1.00 0.64 \ ATOM 144 CZ PHE y 37 -14.041 -37.903 42.802 1.00 0.64 \ ATOM 145 N LEU y 38 -8.437 -36.356 43.130 1.00 0.64 \ ATOM 146 CA LEU y 38 -7.985 -36.815 44.440 1.00 0.64 \ ATOM 147 C LEU y 38 -7.631 -35.656 45.366 1.00 0.64 \ ATOM 148 O LEU y 38 -8.025 -35.634 46.534 1.00 0.64 \ ATOM 149 CB LEU y 38 -6.785 -37.752 44.298 1.00 0.64 \ ATOM 150 CG LEU y 38 -7.105 -39.108 43.665 1.00 0.64 \ ATOM 151 CD1 LEU y 38 -5.835 -39.890 43.433 1.00 0.64 \ ATOM 152 CD2 LEU y 38 -8.072 -39.875 44.550 1.00 0.64 \ ATOM 153 N LEU y 39 -6.892 -34.687 44.839 1.00 0.64 \ ATOM 154 CA LEU y 39 -6.511 -33.521 45.624 1.00 0.64 \ ATOM 155 C LEU y 39 -7.738 -32.704 46.025 1.00 0.64 \ ATOM 156 O LEU y 39 -7.841 -32.260 47.169 1.00 0.64 \ ATOM 157 CB LEU y 39 -5.478 -32.674 44.868 1.00 0.64 \ ATOM 158 CG LEU y 39 -4.076 -33.291 44.921 1.00 0.64 \ ATOM 159 CD1 LEU y 39 -3.099 -32.515 44.059 1.00 0.64 \ ATOM 160 CD2 LEU y 39 -3.596 -33.362 46.365 1.00 0.64 \ ATOM 161 N ALA y 40 -8.680 -32.547 45.093 1.00 0.64 \ ATOM 162 CA ALA y 40 -9.930 -31.842 45.370 1.00 0.64 \ ATOM 163 C ALA y 40 -10.715 -32.488 46.512 1.00 0.64 \ ATOM 164 O ALA y 40 -11.226 -31.804 47.397 1.00 0.64 \ ATOM 165 CB ALA y 40 -10.786 -31.787 44.130 1.00 0.64 \ ATOM 166 N VAL y 41 -10.812 -33.810 46.477 1.00 -1.50 \ ATOM 167 CA VAL y 41 -11.550 -34.547 47.488 1.00 -1.50 \ ATOM 168 C VAL y 41 -10.997 -34.265 48.873 1.00 -1.50 \ ATOM 169 O VAL y 41 -11.752 -34.121 49.839 1.00 -1.50 \ ATOM 170 CB VAL y 41 -11.498 -36.067 47.212 1.00 -1.50 \ ATOM 171 CG1 VAL y 41 -11.981 -36.850 48.414 1.00 -1.50 \ ATOM 172 CG2 VAL y 41 -12.314 -36.408 45.978 1.00 -1.50 \ ATOM 173 N ARG y 42 -9.677 -34.170 48.976 1.00 0.64 \ ATOM 174 CA ARG y 42 -9.064 -34.000 50.286 1.00 0.64 \ ATOM 175 C ARG y 42 -8.577 -32.573 50.556 1.00 0.64 \ ATOM 176 O ARG y 42 -7.703 -32.362 51.399 1.00 0.64 \ ATOM 177 CB ARG y 42 -7.952 -35.030 50.508 1.00 0.64 \ ATOM 178 CG ARG y 42 -6.867 -35.067 49.469 1.00 0.64 \ ATOM 179 CD ARG y 42 -6.474 -36.515 49.171 1.00 0.64 \ ATOM 180 NE ARG y 42 -5.098 -36.818 49.556 1.00 0.64 \ ATOM 181 CZ ARG y 42 -4.544 -38.022 49.455 1.00 0.64 \ ATOM 182 NH1 ARG y 42 -3.285 -38.209 49.834 1.00 0.64 \ ATOM 183 NH2 ARG y 42 -5.253 -39.043 48.984 1.00 0.64 \ ATOM 184 N ARG y 43 -9.166 -31.606 49.854 1.00 -1.50 \ ATOM 185 CA ARG y 43 -8.834 -30.193 50.033 1.00 -1.50 \ ATOM 186 C ARG y 43 -7.328 -29.944 49.957 1.00 -1.50 \ ATOM 187 O ARG y 43 -6.743 -29.320 50.838 1.00 -1.50 \ ATOM 188 CB ARG y 43 -9.399 -29.674 51.360 1.00 -1.50 \ ATOM 189 CG ARG y 43 -10.915 -29.659 51.415 1.00 -1.50 \ ATOM 190 CD ARG y 43 -11.425 -29.393 52.820 1.00 -1.50 \ ATOM 191 NE ARG y 43 -12.876 -29.222 52.847 1.00 -1.50 \ ATOM 192 CZ ARG y 43 -13.606 -29.184 53.958 1.00 -1.50 \ ATOM 193 NH1 ARG y 43 -13.025 -29.312 55.144 1.00 -1.50 \ ATOM 194 NH2 ARG y 43 -14.921 -29.023 53.883 1.00 -1.50 \ ATOM 195 N GLY y 44 -6.704 -30.459 48.906 1.00 0.64 \ ATOM 196 CA GLY y 44 -5.274 -30.301 48.724 1.00 0.64 \ ATOM 197 C GLY y 44 -4.894 -28.916 48.226 1.00 0.64 \ ATOM 198 O GLY y 44 -5.751 -28.077 47.929 1.00 0.64 \ ATOM 199 N ASN y 45 -3.592 -28.676 48.140 1.00 -1.50 \ ATOM 200 CA ASN y 45 -3.084 -27.373 47.756 1.00 -1.50 \ ATOM 201 C ASN y 45 -3.130 -27.169 46.240 1.00 -1.50 \ ATOM 202 O ASN y 45 -2.093 -26.965 45.610 1.00 -1.50 \ ATOM 203 CB ASN y 45 -1.657 -27.196 48.291 1.00 -1.50 \ ATOM 204 CG ASN y 45 -1.284 -25.737 48.506 1.00 -1.50 \ ATOM 205 OD1 ASN y 45 -2.150 -24.859 48.580 1.00 -1.50 \ ATOM 206 ND2 ASN y 45 0.013 -25.473 48.621 1.00 -1.50 \ ATOM 207 N LEU y 46 -4.336 -27.223 45.669 1.00 0.64 \ ATOM 208 CA LEU y 46 -4.548 -26.940 44.251 1.00 0.64 \ ATOM 209 C LEU y 46 -4.360 -25.463 43.931 1.00 0.64 \ ATOM 210 O LEU y 46 -4.380 -25.067 42.760 1.00 0.64 \ ATOM 211 CB LEU y 46 -5.955 -27.357 43.817 1.00 0.64 \ ATOM 212 CG LEU y 46 -6.261 -28.847 43.736 1.00 0.64 \ ATOM 213 CD1 LEU y 46 -7.727 -29.046 43.418 1.00 0.64 \ ATOM 214 CD2 LEU y 46 -5.391 -29.459 42.656 1.00 0.64 \ ATOM 215 OXT LEU y 46 -4.209 -24.636 44.830 1.00 0.64 \ """, "e4ub8y1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e4ub8y1_csv", state=0, origin=1) cmd.zoom("e4ub8y1_csv", animate=-1)