cmd.read_pdbstr("""\ ATOM 1 N MET a 1 -48.170 -4.086 78.348 1.00 -1.00 \ ATOM 2 CA MET a 1 -47.190 -4.528 79.325 1.00 -1.00 \ ATOM 3 C MET a 1 -47.551 -3.937 80.665 1.00 -1.00 \ ATOM 4 O MET a 1 -47.909 -2.770 80.731 1.00 -1.00 \ ATOM 5 CB MET a 1 -45.769 -4.124 78.906 1.00 -1.00 \ ATOM 6 CG MET a 1 -45.534 -2.626 78.664 1.00 -1.00 \ ATOM 7 SD MET a 1 -43.758 -2.201 78.633 1.00 -1.00 \ ATOM 8 CE MET a 1 -43.219 -2.988 80.157 1.00 -1.00 \ ATOM 9 N ARG a 2 -47.461 -4.752 81.715 1.00 0.39 \ ATOM 10 CA ARG a 2 -47.968 -4.398 83.039 1.00 0.39 \ ATOM 11 C ARG a 2 -47.613 -2.965 83.347 1.00 0.39 \ ATOM 12 O ARG a 2 -46.488 -2.545 83.117 1.00 0.39 \ ATOM 13 CB ARG a 2 -47.420 -5.353 84.109 1.00 0.39 \ ATOM 14 CG ARG a 2 -47.323 -4.785 85.519 1.00 0.39 \ ATOM 15 CD ARG a 2 -48.074 -5.630 86.542 1.00 0.39 \ ATOM 16 NE ARG a 2 -47.243 -6.455 87.438 1.00 0.39 \ ATOM 17 CZ ARG a 2 -47.352 -6.463 88.781 1.00 0.39 \ ATOM 18 NH1 ARG a 2 -48.232 -5.674 89.398 1.00 0.39 \ ATOM 19 NH2 ARG a 2 -46.589 -7.259 89.530 1.00 0.39 \ ATOM 20 N ALA a 3 -48.605 -2.203 83.785 1.00 0.39 \ ATOM 21 CA ALA a 3 -48.438 -0.788 84.099 1.00 0.39 \ ATOM 22 C ALA a 3 -47.146 -0.481 84.875 1.00 0.39 \ ATOM 23 O ALA a 3 -46.347 0.366 84.470 1.00 0.39 \ ATOM 24 CB ALA a 3 -49.641 -0.302 84.876 1.00 0.39 \ ATOM 25 N LYS a 4 -46.931 -1.191 85.974 1.00 0.39 \ ATOM 26 CA LYS a 4 -45.784 -0.922 86.829 1.00 0.39 \ ATOM 27 C LYS a 4 -44.449 -1.253 86.143 1.00 0.39 \ ATOM 28 O LYS a 4 -43.474 -0.552 86.353 1.00 0.39 \ ATOM 29 CB LYS a 4 -45.931 -1.674 88.164 1.00 0.39 \ ATOM 30 CG LYS a 4 -45.264 -3.025 88.249 1.00 0.39 \ ATOM 31 CD LYS a 4 -44.786 -3.248 89.659 1.00 0.39 \ ATOM 32 CE LYS a 4 -45.922 -3.192 90.649 1.00 0.39 \ ATOM 33 NZ LYS a 4 -45.446 -3.283 92.056 1.00 0.39 \ ATOM 34 N TRP a 5 -44.406 -2.293 85.318 1.00 0.39 \ ATOM 35 CA TRP a 5 -43.184 -2.606 84.569 1.00 0.39 \ ATOM 36 C TRP a 5 -42.977 -1.587 83.460 1.00 0.39 \ ATOM 37 O TRP a 5 -41.868 -1.384 82.983 1.00 0.39 \ ATOM 38 CB TRP a 5 -43.208 -4.013 83.939 1.00 0.39 \ ATOM 39 CG TRP a 5 -43.436 -5.198 84.843 1.00 0.39 \ ATOM 40 CD1 TRP a 5 -44.053 -6.375 84.496 1.00 0.39 \ ATOM 41 CD2 TRP a 5 -43.057 -5.340 86.222 1.00 0.39 \ ATOM 42 NE1 TRP a 5 -44.086 -7.233 85.572 1.00 0.39 \ ATOM 43 CE2 TRP a 5 -43.477 -6.624 86.642 1.00 0.39 \ ATOM 44 CE3 TRP a 5 -42.410 -4.515 87.139 1.00 0.39 \ ATOM 45 CZ2 TRP a 5 -43.262 -7.093 87.940 1.00 0.39 \ ATOM 46 CZ3 TRP a 5 -42.203 -4.988 88.414 1.00 0.39 \ ATOM 47 CH2 TRP a 5 -42.636 -6.260 88.806 1.00 0.39 \ ATOM 48 N ARG a 6 -44.062 -0.975 83.021 1.00 0.39 \ ATOM 49 CA ARG a 6 -43.944 0.077 82.039 1.00 0.39 \ ATOM 50 C ARG a 6 -43.256 1.239 82.727 1.00 0.39 \ ATOM 51 O ARG a 6 -42.354 1.849 82.170 1.00 0.39 \ ATOM 52 CB ARG a 6 -45.309 0.481 81.487 1.00 0.39 \ ATOM 53 CG ARG a 6 -45.323 1.846 80.869 1.00 0.39 \ ATOM 54 CD ARG a 6 -45.428 1.744 79.374 1.00 0.39 \ ATOM 55 NE ARG a 6 -46.551 2.536 78.862 1.00 0.39 \ ATOM 56 CZ ARG a 6 -46.429 3.768 78.344 1.00 0.39 \ ATOM 57 NH1 ARG a 6 -45.212 4.351 78.261 1.00 0.39 \ ATOM 58 NH2 ARG a 6 -47.523 4.418 77.901 1.00 0.39 \ ATOM 59 N LYS a 7 -43.674 1.507 83.961 1.00 0.39 \ ATOM 60 CA LYS a 7 -43.096 2.571 84.765 1.00 0.39 \ ATOM 61 C LYS a 7 -41.602 2.400 84.945 1.00 0.39 \ ATOM 62 O LYS a 7 -40.844 3.344 84.833 1.00 0.39 \ ATOM 63 CB LYS a 7 -43.755 2.613 86.118 1.00 0.39 \ ATOM 64 CG LYS a 7 -43.367 3.798 86.916 1.00 0.39 \ ATOM 65 CD LYS a 7 -43.791 3.584 88.332 1.00 0.39 \ ATOM 66 CE LYS a 7 -44.471 4.790 88.860 1.00 0.39 \ ATOM 67 NZ LYS a 7 -45.530 4.368 89.783 1.00 0.39 \ ATOM 68 N LYS a 8 -41.187 1.176 85.235 1.00 0.39 \ ATOM 69 CA LYS a 8 -39.776 0.838 85.333 1.00 0.39 \ ATOM 70 C LYS a 8 -39.087 1.106 84.005 1.00 0.39 \ ATOM 71 O LYS a 8 -38.079 1.799 83.956 1.00 0.39 \ ATOM 72 CB LYS a 8 -39.614 -0.623 85.748 1.00 0.39 \ ATOM 73 CG LYS a 8 -38.206 -1.124 85.738 1.00 0.39 \ ATOM 74 CD LYS a 8 -38.114 -2.519 86.309 1.00 0.39 \ ATOM 75 CE LYS a 8 -38.295 -2.494 87.809 1.00 0.39 \ ATOM 76 NZ LYS a 8 -37.875 -3.757 88.484 1.00 0.39 \ ATOM 77 N ARG a 9 -39.655 0.554 82.937 1.00 0.39 \ ATOM 78 CA ARG a 9 -39.157 0.734 81.576 1.00 0.39 \ ATOM 79 C ARG a 9 -38.747 2.163 81.358 1.00 0.39 \ ATOM 80 O ARG a 9 -37.610 2.438 80.931 1.00 0.39 \ ATOM 81 CB ARG a 9 -40.228 0.361 80.555 1.00 0.39 \ ATOM 82 CG ARG a 9 -39.922 -0.822 79.684 1.00 0.39 \ ATOM 83 CD ARG a 9 -39.557 -0.326 78.316 1.00 0.39 \ ATOM 84 NE ARG a 9 -40.401 -0.781 77.208 1.00 0.39 \ ATOM 85 CZ ARG a 9 -40.533 -2.038 76.794 1.00 0.39 \ ATOM 86 NH1 ARG a 9 -39.944 -3.044 77.423 1.00 0.39 \ ATOM 87 NH2 ARG a 9 -41.289 -2.293 75.747 1.00 0.39 \ ATOM 88 N THR a 10 -39.676 3.071 81.678 1.00 -2.46 \ ATOM 89 CA THR a 10 -39.466 4.492 81.432 1.00 -2.46 \ ATOM 90 C THR a 10 -38.559 5.082 82.507 1.00 -2.46 \ ATOM 91 O THR a 10 -37.812 6.012 82.235 1.00 -2.46 \ ATOM 92 CB THR a 10 -40.824 5.284 81.314 1.00 -2.46 \ ATOM 93 OG1 THR a 10 -40.690 6.610 81.832 1.00 -2.46 \ ATOM 94 CG2 THR a 10 -41.916 4.628 82.054 1.00 -2.46 \ ATOM 95 N ARG a 11 -38.576 4.513 83.706 1.00 0.39 \ ATOM 96 CA ARG a 11 -37.754 5.035 84.791 1.00 0.39 \ ATOM 97 C ARG a 11 -36.262 4.840 84.467 1.00 0.39 \ ATOM 98 O ARG a 11 -35.413 5.682 84.797 1.00 0.39 \ ATOM 99 CB ARG a 11 -38.124 4.355 86.109 1.00 0.39 \ ATOM 100 CG ARG a 11 -38.268 5.280 87.305 1.00 0.39 \ ATOM 101 CD ARG a 11 -39.619 5.973 87.285 1.00 0.39 \ ATOM 102 NE ARG a 11 -40.188 6.262 88.611 1.00 0.39 \ ATOM 103 CZ ARG a 11 -40.523 5.333 89.510 1.00 0.39 \ ATOM 104 NH1 ARG a 11 -40.310 4.041 89.256 1.00 0.39 \ ATOM 105 NH2 ARG a 11 -41.052 5.689 90.678 1.00 0.39 \ ATOM 106 N ARG a 12 -35.950 3.731 83.806 1.00 0.39 \ ATOM 107 CA ARG a 12 -34.594 3.483 83.333 1.00 0.39 \ ATOM 108 C ARG a 12 -34.234 4.474 82.256 1.00 0.39 \ ATOM 109 O ARG a 12 -33.169 5.057 82.274 1.00 0.39 \ ATOM 110 CB ARG a 12 -34.447 2.066 82.781 1.00 0.39 \ ATOM 111 CG ARG a 12 -34.640 0.969 83.778 1.00 0.39 \ ATOM 112 CD ARG a 12 -34.591 -0.354 83.093 1.00 0.39 \ ATOM 113 NE ARG a 12 -34.995 -1.429 83.985 1.00 0.39 \ ATOM 114 CZ ARG a 12 -35.423 -2.615 83.568 1.00 0.39 \ ATOM 115 NH1 ARG a 12 -35.506 -2.864 82.260 1.00 0.39 \ ATOM 116 NH2 ARG a 12 -35.775 -3.548 84.450 1.00 0.39 \ ATOM 117 N LEU a 13 -35.134 4.642 81.306 1.00 0.39 \ ATOM 118 CA LEU a 13 -34.896 5.521 80.178 1.00 0.39 \ ATOM 119 C LEU a 13 -34.428 6.894 80.651 1.00 0.39 \ ATOM 120 O LEU a 13 -33.469 7.463 80.120 1.00 0.39 \ ATOM 121 CB LEU a 13 -36.172 5.647 79.342 1.00 0.39 \ ATOM 122 CG LEU a 13 -36.132 5.877 77.834 1.00 0.39 \ ATOM 123 CD1 LEU a 13 -37.289 6.755 77.459 1.00 0.39 \ ATOM 124 CD2 LEU a 13 -34.853 6.512 77.404 1.00 0.39 \ ATOM 125 N LYS a 14 -35.102 7.401 81.676 1.00 0.39 \ ATOM 126 CA LYS a 14 -34.851 8.759 82.144 1.00 0.39 \ ATOM 127 C LYS a 14 -33.429 8.852 82.680 1.00 0.39 \ ATOM 128 O LYS a 14 -32.721 9.841 82.428 1.00 0.39 \ ATOM 129 CB LYS a 14 -35.876 9.173 83.215 1.00 0.39 \ ATOM 130 CG LYS a 14 -37.281 9.484 82.650 1.00 0.39 \ ATOM 131 CD LYS a 14 -38.215 10.184 83.653 1.00 0.39 \ ATOM 132 CE LYS a 14 -38.667 9.219 84.737 1.00 0.39 \ ATOM 133 NZ LYS a 14 -39.832 9.743 85.517 1.00 0.39 \ ATOM 134 N ARG a 15 -33.035 7.792 83.397 1.00 0.39 \ ATOM 135 CA ARG a 15 -31.724 7.643 84.028 1.00 0.39 \ ATOM 136 C ARG a 15 -30.618 7.560 82.976 1.00 0.39 \ ATOM 137 O ARG a 15 -29.500 8.029 83.199 1.00 0.39 \ ATOM 138 CB ARG a 15 -31.741 6.401 84.932 1.00 0.39 \ ATOM 139 CG ARG a 15 -30.480 6.127 85.746 1.00 0.39 \ ATOM 140 CD ARG a 15 -30.758 5.465 87.126 1.00 0.39 \ ATOM 141 NE ARG a 15 -31.905 4.552 87.121 1.00 0.39 \ ATOM 142 CZ ARG a 15 -31.855 3.281 86.709 1.00 0.39 \ ATOM 143 NH1 ARG a 15 -30.697 2.766 86.267 1.00 0.39 \ ATOM 144 NH2 ARG a 15 -32.959 2.525 86.732 1.00 0.39 \ ATOM 145 N LYS a 16 -30.943 6.995 81.816 1.00 0.39 \ ATOM 146 CA LYS a 16 -29.970 6.843 80.744 1.00 0.39 \ ATOM 147 C LYS a 16 -29.821 8.105 79.893 1.00 0.39 \ ATOM 148 O LYS a 16 -28.731 8.423 79.388 1.00 0.39 \ ATOM 149 CB LYS a 16 -30.350 5.674 79.850 1.00 0.39 \ ATOM 150 CG LYS a 16 -29.242 5.332 78.878 1.00 0.39 \ ATOM 151 CD LYS a 16 -28.961 3.839 78.756 1.00 0.39 \ ATOM 152 CE LYS a 16 -27.659 3.656 78.006 1.00 0.39 \ ATOM 153 NZ LYS a 16 -27.532 4.655 76.891 1.00 0.39 \ ATOM 154 N ARG a 17 -30.924 8.819 79.713 1.00 0.39 \ ATOM 155 CA ARG a 17 -30.848 10.088 79.012 1.00 0.39 \ ATOM 156 C ARG a 17 -30.273 11.058 79.999 1.00 0.39 \ ATOM 157 O ARG a 17 -29.607 12.005 79.624 1.00 0.39 \ ATOM 158 CB ARG a 17 -32.219 10.548 78.502 1.00 0.39 \ ATOM 159 CG ARG a 17 -32.993 9.430 77.804 1.00 0.39 \ ATOM 160 CD ARG a 17 -34.072 9.898 76.823 1.00 0.39 \ ATOM 161 NE ARG a 17 -35.303 10.260 77.520 1.00 0.39 \ ATOM 162 CZ ARG a 17 -36.524 10.111 77.024 1.00 0.39 \ ATOM 163 NH1 ARG a 17 -36.707 9.587 75.809 1.00 0.39 \ ATOM 164 NH2 ARG a 17 -37.563 10.488 77.753 1.00 0.39 \ ATOM 165 N ARG a 18 -30.539 10.812 81.277 1.00 0.39 \ ATOM 166 CA ARG a 18 -29.958 11.627 82.315 1.00 0.39 \ ATOM 167 C ARG a 18 -28.471 11.551 82.088 1.00 0.39 \ ATOM 168 O ARG a 18 -27.816 12.580 81.958 1.00 0.39 \ ATOM 169 CB ARG a 18 -30.345 11.132 83.709 1.00 0.39 \ ATOM 170 CG ARG a 18 -30.491 12.227 84.757 1.00 0.39 \ ATOM 171 CD ARG a 18 -30.936 11.644 86.074 1.00 0.39 \ ATOM 172 NE ARG a 18 -32.126 10.814 85.922 1.00 0.39 \ ATOM 173 CZ ARG a 18 -32.743 10.211 86.942 1.00 0.39 \ ATOM 174 NH1 ARG a 18 -32.271 10.365 88.188 1.00 0.39 \ ATOM 175 NH2 ARG a 18 -33.836 9.453 86.732 1.00 0.39 \ ATOM 176 N LYS a 19 -27.979 10.316 81.960 1.00 0.39 \ ATOM 177 CA LYS a 19 -26.553 10.008 81.752 1.00 0.39 \ ATOM 178 C LYS a 19 -25.965 10.692 80.528 1.00 0.39 \ ATOM 179 O LYS a 19 -25.141 11.592 80.631 1.00 0.39 \ ATOM 180 CB LYS a 19 -26.346 8.489 81.620 1.00 0.39 \ ATOM 181 CG LYS a 19 -25.126 7.908 82.342 1.00 0.39 \ ATOM 182 CD LYS a 19 -25.527 7.360 83.722 1.00 0.39 \ ATOM 183 CE LYS a 19 -24.328 6.713 84.482 1.00 0.39 \ ATOM 184 NZ LYS a 19 -24.680 5.868 85.708 1.00 0.39 \ ATOM 185 N VAL a 20 -26.406 10.240 79.373 1.00 -2.46 \ ATOM 186 CA VAL a 20 -25.889 10.711 78.114 1.00 -2.46 \ ATOM 187 C VAL a 20 -25.915 12.233 77.974 1.00 -2.46 \ ATOM 188 O VAL a 20 -25.119 12.831 77.252 1.00 -2.46 \ ATOM 189 CB VAL a 20 -26.679 10.051 76.974 1.00 -2.46 \ ATOM 190 CG1 VAL a 20 -26.797 10.961 75.741 1.00 -2.46 \ ATOM 191 CG2 VAL a 20 -26.053 8.696 76.636 1.00 -2.46 \ ATOM 192 N ARG a 21 -26.811 12.885 78.687 1.00 0.39 \ ATOM 193 CA ARG a 21 -26.942 14.311 78.471 1.00 0.39 \ ATOM 194 C ARG a 21 -25.800 14.981 79.199 1.00 0.39 \ ATOM 195 O ARG a 21 -25.141 15.875 78.664 1.00 0.39 \ ATOM 196 CB ARG a 21 -28.298 14.830 78.947 1.00 0.39 \ ATOM 197 CG ARG a 21 -28.747 16.085 78.230 1.00 0.39 \ ATOM 198 CD ARG a 21 -30.006 16.585 78.825 1.00 0.39 \ ATOM 199 NE ARG a 21 -30.158 18.024 78.725 1.00 0.39 \ ATOM 200 CZ ARG a 21 -31.078 18.693 79.413 1.00 0.39 \ ATOM 201 NH1 ARG a 21 -31.200 20.008 79.300 1.00 0.39 \ ATOM 202 NH2 ARG a 21 -31.894 18.035 80.223 1.00 0.39 \ ATOM 203 N ALA a 22 -25.547 14.497 80.411 1.00 -2.46 \ ATOM 204 CA ALA a 22 -24.494 15.027 81.245 1.00 -2.46 \ ATOM 205 C ALA a 22 -23.134 14.630 80.717 1.00 -2.46 \ ATOM 206 O ALA a 22 -22.125 15.123 81.201 1.00 -2.46 \ ATOM 207 CB ALA a 22 -24.665 14.558 82.650 1.00 -2.46 \ ATOM 208 N ARG a 23 -23.088 13.731 79.735 1.00 0.39 \ ATOM 209 CA ARG a 23 -21.843 13.477 79.010 1.00 0.39 \ ATOM 210 C ARG a 23 -21.409 14.793 78.419 1.00 0.39 \ ATOM 211 O ARG a 23 -20.230 15.074 78.267 1.00 0.39 \ ATOM 212 CB ARG a 23 -22.016 12.440 77.904 1.00 0.39 \ ATOM 213 CG ARG a 23 -21.752 11.004 78.295 1.00 0.39 \ ATOM 214 CD ARG a 23 -21.967 10.092 77.105 1.00 0.39 \ ATOM 215 NE ARG a 23 -20.764 9.347 76.754 1.00 0.39 \ ATOM 216 CZ ARG a 23 -19.829 9.760 75.892 1.00 0.39 \ ATOM 217 NH1 ARG a 23 -18.761 9.002 75.652 1.00 0.39 \ ATOM 218 NH2 ARG a 23 -19.946 10.925 75.269 1.00 0.39 \ ATOM 219 N SER a 24 -22.399 15.606 78.101 1.00 -1.00 \ ATOM 220 CA SER a 24 -22.172 16.909 77.526 1.00 -1.00 \ ATOM 221 C SER a 24 -22.123 18.023 78.579 1.00 -1.00 \ ATOM 222 O SER a 24 -21.674 19.124 78.287 1.00 -1.00 \ ATOM 223 CB SER a 24 -23.263 17.198 76.496 1.00 -1.00 \ ATOM 224 OG SER a 24 -23.227 18.557 76.100 1.00 -1.00 \ ATOM 225 N LYS a 25 -22.581 17.723 79.792 1.00 -1.00 \ ATOM 226 CA LYS a 25 -22.701 18.697 80.890 1.00 -1.00 \ ATOM 227 C LYS a 25 -21.635 19.796 80.903 1.00 -1.00 \ ATOM 228 O LYS a 25 -21.838 20.876 80.346 1.00 -1.00 \ ATOM 229 CB LYS a 25 -22.672 17.959 82.234 1.00 -1.00 \ ATOM 230 CG LYS a 25 -22.629 18.858 83.455 1.00 -1.00 \ ATOM 231 CD LYS a 25 -22.206 18.099 84.725 1.00 -1.00 \ ATOM 232 CE LYS a 25 -23.262 17.094 85.232 1.00 -1.00 \ ATOM 233 NZ LYS a 25 -24.487 17.722 85.838 1.00 -1.00 \ """, "e4ujha1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e4ujha1_csv", state=0, origin=1) cmd.zoom("e4ujha1_csv", animate=-1)