cmd.read_pdbstr("""\ ATOM 1 N MET a 1 -48.179 -4.191 78.348 1.00 -1.00 \ ATOM 2 CA MET a 1 -47.379 -4.658 79.472 1.00 -1.00 \ ATOM 3 C MET a 1 -47.920 -4.140 80.787 1.00 -1.00 \ ATOM 4 O MET a 1 -48.529 -3.064 80.816 1.00 -1.00 \ ATOM 5 CB MET a 1 -45.936 -4.213 79.307 1.00 -1.00 \ ATOM 6 CG MET a 1 -45.690 -2.737 79.579 1.00 -1.00 \ ATOM 7 SD MET a 1 -43.965 -2.329 79.219 1.00 -1.00 \ ATOM 8 CE MET a 1 -43.128 -3.639 80.126 1.00 -1.00 \ ATOM 9 N ARG a 2 -47.698 -4.897 81.864 1.00 0.39 \ ATOM 10 CA ARG a 2 -48.118 -4.484 83.202 1.00 0.39 \ ATOM 11 C ARG a 2 -47.753 -3.031 83.424 1.00 0.39 \ ATOM 12 O ARG a 2 -46.638 -2.624 83.126 1.00 0.39 \ ATOM 13 CB ARG a 2 -47.470 -5.360 84.280 1.00 0.39 \ ATOM 14 CG ARG a 2 -47.558 -4.794 85.706 1.00 0.39 \ ATOM 15 CD ARG a 2 -48.450 -5.637 86.632 1.00 0.39 \ ATOM 16 NE ARG a 2 -47.718 -6.694 87.329 1.00 0.39 \ ATOM 17 CZ ARG a 2 -47.584 -6.765 88.652 1.00 0.39 \ ATOM 18 NH1 ARG a 2 -48.142 -5.850 89.430 1.00 0.39 \ ATOM 19 NH2 ARG a 2 -46.894 -7.753 89.203 1.00 0.39 \ ATOM 20 N ALA a 3 -48.713 -2.247 83.893 1.00 0.39 \ ATOM 21 CA ALA a 3 -48.502 -0.836 84.187 1.00 0.39 \ ATOM 22 C ALA a 3 -47.184 -0.560 84.897 1.00 0.39 \ ATOM 23 O ALA a 3 -46.356 0.223 84.423 1.00 0.39 \ ATOM 24 CB ALA a 3 -49.646 -0.315 85.033 1.00 0.39 \ ATOM 25 N LYS a 4 -47.005 -1.216 86.039 1.00 0.39 \ ATOM 26 CA LYS a 4 -45.885 -0.954 86.929 1.00 0.39 \ ATOM 27 C LYS a 4 -44.548 -1.288 86.289 1.00 0.39 \ ATOM 28 O LYS a 4 -43.535 -0.704 86.639 1.00 0.39 \ ATOM 29 CB LYS a 4 -46.064 -1.739 88.230 1.00 0.39 \ ATOM 30 CG LYS a 4 -45.263 -3.020 88.312 1.00 0.39 \ ATOM 31 CD LYS a 4 -44.745 -3.225 89.710 1.00 0.39 \ ATOM 32 CE LYS a 4 -45.871 -3.141 90.718 1.00 0.39 \ ATOM 33 NZ LYS a 4 -45.386 -3.303 92.122 1.00 0.39 \ ATOM 34 N TRP a 5 -44.558 -2.222 85.349 1.00 0.39 \ ATOM 35 CA TRP a 5 -43.356 -2.559 84.597 1.00 0.39 \ ATOM 36 C TRP a 5 -43.091 -1.547 83.494 1.00 0.39 \ ATOM 37 O TRP a 5 -42.065 -1.601 82.817 1.00 0.39 \ ATOM 38 CB TRP a 5 -43.449 -3.941 83.943 1.00 0.39 \ ATOM 39 CG TRP a 5 -43.636 -5.164 84.804 1.00 0.39 \ ATOM 40 CD1 TRP a 5 -44.208 -6.325 84.399 1.00 0.39 \ ATOM 41 CD2 TRP a 5 -43.239 -5.372 86.169 1.00 0.39 \ ATOM 42 NE1 TRP a 5 -44.203 -7.239 85.413 1.00 0.39 \ ATOM 43 CE2 TRP a 5 -43.611 -6.679 86.513 1.00 0.39 \ ATOM 44 CE3 TRP a 5 -42.619 -4.587 87.128 1.00 0.39 \ ATOM 45 CZ2 TRP a 5 -43.388 -7.213 87.776 1.00 0.39 \ ATOM 46 CZ3 TRP a 5 -42.399 -5.126 88.374 1.00 0.39 \ ATOM 47 CH2 TRP a 5 -42.788 -6.419 88.689 1.00 0.39 \ ATOM 48 N ARG a 6 -44.041 -0.661 83.266 1.00 0.39 \ ATOM 49 CA ARG a 6 -43.783 0.408 82.340 1.00 0.39 \ ATOM 50 C ARG a 6 -43.378 1.638 83.145 1.00 0.39 \ ATOM 51 O ARG a 6 -42.688 2.537 82.662 1.00 0.39 \ ATOM 52 CB ARG a 6 -44.991 0.687 81.462 1.00 0.39 \ ATOM 53 CG ARG a 6 -44.628 1.657 80.382 1.00 0.39 \ ATOM 54 CD ARG a 6 -45.574 1.652 79.227 1.00 0.39 \ ATOM 55 NE ARG a 6 -46.410 2.849 79.243 1.00 0.39 \ ATOM 56 CZ ARG a 6 -45.977 4.097 79.044 1.00 0.39 \ ATOM 57 NH1 ARG a 6 -44.677 4.362 78.816 1.00 0.39 \ ATOM 58 NH2 ARG a 6 -46.868 5.089 79.069 1.00 0.39 \ ATOM 59 N LYS a 7 -43.809 1.674 84.394 1.00 0.39 \ ATOM 60 CA LYS a 7 -43.281 2.657 85.302 1.00 0.39 \ ATOM 61 C LYS a 7 -41.795 2.348 85.465 1.00 0.39 \ ATOM 62 O LYS a 7 -40.961 3.244 85.425 1.00 0.39 \ ATOM 63 CB LYS a 7 -44.009 2.612 86.627 1.00 0.39 \ ATOM 64 CG LYS a 7 -43.873 3.872 87.411 1.00 0.39 \ ATOM 65 CD LYS a 7 -44.529 3.710 88.746 1.00 0.39 \ ATOM 66 CE LYS a 7 -44.598 5.017 89.461 1.00 0.39 \ ATOM 67 NZ LYS a 7 -45.054 4.823 90.854 1.00 0.39 \ ATOM 68 N LYS a 8 -41.455 1.069 85.618 1.00 0.39 \ ATOM 69 CA LYS a 8 -40.053 0.693 85.700 1.00 0.39 \ ATOM 70 C LYS a 8 -39.401 1.027 84.372 1.00 0.39 \ ATOM 71 O LYS a 8 -38.430 1.745 84.357 1.00 0.39 \ ATOM 72 CB LYS a 8 -39.887 -0.791 86.049 1.00 0.39 \ ATOM 73 CG LYS a 8 -38.483 -1.205 86.500 1.00 0.39 \ ATOM 74 CD LYS a 8 -38.429 -2.706 86.809 1.00 0.39 \ ATOM 75 CE LYS a 8 -38.033 -3.014 88.255 1.00 0.39 \ ATOM 76 NZ LYS a 8 -36.550 -3.164 88.503 1.00 0.39 \ ATOM 77 N ARG a 9 -39.983 0.558 83.266 1.00 0.39 \ ATOM 78 CA ARG a 9 -39.375 0.674 81.932 1.00 0.39 \ ATOM 79 C ARG a 9 -38.921 2.077 81.648 1.00 0.39 \ ATOM 80 O ARG a 9 -37.754 2.301 81.283 1.00 0.39 \ ATOM 81 CB ARG a 9 -40.338 0.248 80.826 1.00 0.39 \ ATOM 82 CG ARG a 9 -39.732 0.242 79.421 1.00 0.39 \ ATOM 83 CD ARG a 9 -40.827 0.432 78.383 1.00 0.39 \ ATOM 84 NE ARG a 9 -40.900 -0.484 77.223 1.00 0.39 \ ATOM 85 CZ ARG a 9 -40.681 -1.800 77.201 1.00 0.39 \ ATOM 86 NH1 ARG a 9 -40.314 -2.462 78.279 1.00 0.39 \ ATOM 87 NH2 ARG a 9 -40.823 -2.463 76.065 1.00 0.39 \ ATOM 88 N THR a 10 -39.831 3.030 81.830 1.00 -2.46 \ ATOM 89 CA THR a 10 -39.473 4.406 81.551 1.00 -2.46 \ ATOM 90 C THR a 10 -38.540 4.940 82.631 1.00 -2.46 \ ATOM 91 O THR a 10 -37.597 5.669 82.318 1.00 -2.46 \ ATOM 92 CB THR a 10 -40.692 5.332 81.423 1.00 -2.46 \ ATOM 93 OG1 THR a 10 -41.091 5.758 82.718 1.00 -2.46 \ ATOM 94 CG2 THR a 10 -41.843 4.645 80.674 1.00 -2.46 \ ATOM 95 N ARG a 11 -38.763 4.552 83.883 1.00 0.39 \ ATOM 96 CA ARG a 11 -37.884 4.997 84.962 1.00 0.39 \ ATOM 97 C ARG a 11 -36.367 4.764 84.659 1.00 0.39 \ ATOM 98 O ARG a 11 -35.502 5.612 84.934 1.00 0.39 \ ATOM 99 CB ARG a 11 -38.294 4.305 86.256 1.00 0.39 \ ATOM 100 CG ARG a 11 -38.513 5.257 87.392 1.00 0.39 \ ATOM 101 CD ARG a 11 -39.601 4.785 88.323 1.00 0.39 \ ATOM 102 NE ARG a 11 -40.018 5.874 89.201 1.00 0.39 \ ATOM 103 CZ ARG a 11 -40.905 5.759 90.185 1.00 0.39 \ ATOM 104 NH1 ARG a 11 -41.484 4.589 90.436 1.00 0.39 \ ATOM 105 NH2 ARG a 11 -41.205 6.819 90.928 1.00 0.39 \ ATOM 106 N ARG a 12 -36.071 3.610 84.074 1.00 0.39 \ ATOM 107 CA ARG a 12 -34.733 3.253 83.652 1.00 0.39 \ ATOM 108 C ARG a 12 -34.289 4.215 82.565 1.00 0.39 \ ATOM 109 O ARG a 12 -33.266 4.876 82.663 1.00 0.39 \ ATOM 110 CB ARG a 12 -34.708 1.828 83.106 1.00 0.39 \ ATOM 111 CG ARG a 12 -35.308 0.757 83.960 1.00 0.39 \ ATOM 112 CD ARG a 12 -34.320 -0.355 84.011 1.00 0.39 \ ATOM 113 NE ARG a 12 -34.871 -1.621 84.447 1.00 0.39 \ ATOM 114 CZ ARG a 12 -35.540 -2.444 83.649 1.00 0.39 \ ATOM 115 NH1 ARG a 12 -35.758 -2.092 82.391 1.00 0.39 \ ATOM 116 NH2 ARG a 12 -36.005 -3.607 84.107 1.00 0.39 \ ATOM 117 N LEU a 13 -35.099 4.262 81.516 1.00 0.39 \ ATOM 118 CA LEU a 13 -34.855 5.041 80.315 1.00 0.39 \ ATOM 119 C LEU a 13 -34.538 6.485 80.659 1.00 0.39 \ ATOM 120 O LEU a 13 -33.835 7.158 79.923 1.00 0.39 \ ATOM 121 CB LEU a 13 -36.089 4.918 79.399 1.00 0.39 \ ATOM 122 CG LEU a 13 -36.562 5.809 78.245 1.00 0.39 \ ATOM 123 CD1 LEU a 13 -37.183 7.053 78.803 1.00 0.39 \ ATOM 124 CD2 LEU a 13 -35.498 6.130 77.211 1.00 0.39 \ ATOM 125 N LYS a 14 -35.059 6.955 81.785 1.00 0.39 \ ATOM 126 CA LYS a 14 -34.745 8.289 82.256 1.00 0.39 \ ATOM 127 C LYS a 14 -33.282 8.343 82.660 1.00 0.39 \ ATOM 128 O LYS a 14 -32.509 9.168 82.172 1.00 0.39 \ ATOM 129 CB LYS a 14 -35.626 8.662 83.432 1.00 0.39 \ ATOM 130 CG LYS a 14 -37.068 8.685 83.119 1.00 0.39 \ ATOM 131 CD LYS a 14 -37.677 9.954 83.655 1.00 0.39 \ ATOM 132 CE LYS a 14 -38.757 9.706 84.713 1.00 0.39 \ ATOM 133 NZ LYS a 14 -39.335 11.014 85.158 1.00 0.39 \ ATOM 134 N ARG a 15 -32.923 7.441 83.566 1.00 0.39 \ ATOM 135 CA ARG a 15 -31.569 7.315 84.059 1.00 0.39 \ ATOM 136 C ARG a 15 -30.521 7.286 82.939 1.00 0.39 \ ATOM 137 O ARG a 15 -29.429 7.816 83.116 1.00 0.39 \ ATOM 138 CB ARG a 15 -31.464 6.062 84.908 1.00 0.39 \ ATOM 139 CG ARG a 15 -30.683 6.269 86.165 1.00 0.39 \ ATOM 140 CD ARG a 15 -31.196 5.371 87.268 1.00 0.39 \ ATOM 141 NE ARG a 15 -31.373 4.009 86.784 1.00 0.39 \ ATOM 142 CZ ARG a 15 -32.163 3.112 87.372 1.00 0.39 \ ATOM 143 NH1 ARG a 15 -32.852 3.444 88.474 1.00 0.39 \ ATOM 144 NH2 ARG a 15 -32.269 1.887 86.857 1.00 0.39 \ ATOM 145 N LYS a 16 -30.856 6.686 81.793 1.00 0.39 \ ATOM 146 CA LYS a 16 -29.975 6.665 80.614 1.00 0.39 \ ATOM 147 C LYS a 16 -29.744 8.056 80.027 1.00 0.39 \ ATOM 148 O LYS a 16 -28.616 8.440 79.724 1.00 0.39 \ ATOM 149 CB LYS a 16 -30.554 5.752 79.515 1.00 0.39 \ ATOM 150 CG LYS a 16 -29.930 4.354 79.424 1.00 0.39 \ ATOM 151 CD LYS a 16 -29.555 3.938 77.976 1.00 0.39 \ ATOM 152 CE LYS a 16 -28.015 3.945 77.727 1.00 0.39 \ ATOM 153 NZ LYS a 16 -27.341 5.297 77.802 1.00 0.39 \ ATOM 154 N ARG a 17 -30.838 8.793 79.844 1.00 0.39 \ ATOM 155 CA ARG a 17 -30.783 10.097 79.216 1.00 0.39 \ ATOM 156 C ARG a 17 -30.124 10.996 80.224 1.00 0.39 \ ATOM 157 O ARG a 17 -29.298 11.814 79.876 1.00 0.39 \ ATOM 158 CB ARG a 17 -32.183 10.598 78.807 1.00 0.39 \ ATOM 159 CG ARG a 17 -33.075 9.518 78.115 1.00 0.39 \ ATOM 160 CD ARG a 17 -34.077 10.030 77.042 1.00 0.39 \ ATOM 161 NE ARG a 17 -35.428 10.191 77.580 1.00 0.39 \ ATOM 162 CZ ARG a 17 -36.556 9.718 77.038 1.00 0.39 \ ATOM 163 NH1 ARG a 17 -36.557 9.022 75.900 1.00 0.39 \ ATOM 164 NH2 ARG a 17 -37.709 9.943 77.655 1.00 0.39 \ ATOM 165 N ARG a 18 -30.454 10.809 81.492 1.00 0.39 \ ATOM 166 CA ARG a 18 -29.777 11.538 82.555 1.00 0.39 \ ATOM 167 C ARG a 18 -28.268 11.344 82.405 1.00 0.39 \ ATOM 168 O ARG a 18 -27.513 12.304 82.464 1.00 0.39 \ ATOM 169 CB ARG a 18 -30.270 11.078 83.938 1.00 0.39 \ ATOM 170 CG ARG a 18 -30.332 12.174 85.007 1.00 0.39 \ ATOM 171 CD ARG a 18 -30.910 11.644 86.324 1.00 0.39 \ ATOM 172 NE ARG a 18 -32.334 11.271 86.231 1.00 0.39 \ ATOM 173 CZ ARG a 18 -32.962 10.426 87.066 1.00 0.39 \ ATOM 174 NH1 ARG a 18 -32.295 9.844 88.073 1.00 0.39 \ ATOM 175 NH2 ARG a 18 -34.262 10.150 86.899 1.00 0.39 \ ATOM 176 N LYS a 19 -27.842 10.108 82.158 1.00 0.39 \ ATOM 177 CA LYS a 19 -26.432 9.795 81.899 1.00 0.39 \ ATOM 178 C LYS a 19 -25.862 10.574 80.703 1.00 0.39 \ ATOM 179 O LYS a 19 -24.984 11.433 80.858 1.00 0.39 \ ATOM 180 CB LYS a 19 -26.262 8.290 81.664 1.00 0.39 \ ATOM 181 CG LYS a 19 -25.776 7.517 82.868 1.00 0.39 \ ATOM 182 CD LYS a 19 -26.320 8.118 84.170 1.00 0.39 \ ATOM 183 CE LYS a 19 -25.506 7.654 85.383 1.00 0.39 \ ATOM 184 NZ LYS a 19 -25.491 6.154 85.546 1.00 0.39 \ ATOM 185 N VAL a 20 -26.382 10.270 79.514 1.00 -2.46 \ ATOM 186 CA VAL a 20 -25.905 10.871 78.272 1.00 -2.46 \ ATOM 187 C VAL a 20 -25.905 12.393 78.346 1.00 -2.46 \ ATOM 188 O VAL a 20 -25.075 13.064 77.744 1.00 -2.46 \ ATOM 189 CB VAL a 20 -26.759 10.391 77.069 1.00 -2.46 \ ATOM 190 CG1 VAL a 20 -26.966 11.499 76.028 1.00 -2.46 \ ATOM 191 CG2 VAL a 20 -26.137 9.163 76.437 1.00 -2.46 \ ATOM 192 N ARG a 21 -26.821 12.948 79.114 1.00 0.39 \ ATOM 193 CA ARG a 21 -26.922 14.380 79.110 1.00 0.39 \ ATOM 194 C ARG a 21 -25.786 14.956 79.903 1.00 0.39 \ ATOM 195 O ARG a 21 -25.155 15.921 79.460 1.00 0.39 \ ATOM 196 CB ARG a 21 -28.257 14.852 79.653 1.00 0.39 \ ATOM 197 CG ARG a 21 -29.119 15.447 78.572 1.00 0.39 \ ATOM 198 CD ARG a 21 -30.163 16.372 79.151 1.00 0.39 \ ATOM 199 NE ARG a 21 -29.773 17.769 79.044 1.00 0.39 \ ATOM 200 CZ ARG a 21 -30.534 18.778 79.438 1.00 0.39 \ ATOM 201 NH1 ARG a 21 -30.100 20.019 79.305 1.00 0.39 \ ATOM 202 NH2 ARG a 21 -31.725 18.541 79.959 1.00 0.39 \ ATOM 203 N ALA a 22 -25.507 14.356 81.057 1.00 -2.46 \ ATOM 204 CA ALA a 22 -24.468 14.893 81.928 1.00 -2.46 \ ATOM 205 C ALA a 22 -23.136 14.863 81.179 1.00 -2.46 \ ATOM 206 O ALA a 22 -22.386 15.836 81.169 1.00 -2.46 \ ATOM 207 CB ALA a 22 -24.399 14.118 83.229 1.00 -2.46 \ ATOM 208 N ARG a 23 -22.914 13.746 80.493 1.00 0.39 \ ATOM 209 CA ARG a 23 -21.827 13.490 79.546 1.00 0.39 \ ATOM 210 C ARG a 23 -21.467 14.664 78.592 1.00 0.39 \ ATOM 211 O ARG a 23 -20.530 14.591 77.796 1.00 0.39 \ ATOM 212 CB ARG a 23 -22.227 12.235 78.754 1.00 0.39 \ ATOM 213 CG ARG a 23 -21.278 11.794 77.705 1.00 0.39 \ ATOM 214 CD ARG a 23 -21.903 10.816 76.744 1.00 0.39 \ ATOM 215 NE ARG a 23 -21.059 9.637 76.629 1.00 0.39 \ ATOM 216 CZ ARG a 23 -19.846 9.644 76.077 1.00 0.39 \ ATOM 217 NH1 ARG a 23 -19.141 8.523 76.037 1.00 0.39 \ ATOM 218 NH2 ARG a 23 -19.327 10.768 75.578 1.00 0.39 \ ATOM 219 N SER a 24 -22.193 15.765 78.692 1.00 -1.00 \ ATOM 220 CA SER a 24 -21.922 16.927 77.856 1.00 -1.00 \ ATOM 221 C SER a 24 -22.296 18.217 78.597 1.00 -1.00 \ ATOM 222 O SER a 24 -22.501 19.274 77.981 1.00 -1.00 \ ATOM 223 CB SER a 24 -22.691 16.812 76.534 1.00 -1.00 \ ATOM 224 OG SER a 24 -23.188 18.071 76.101 1.00 -1.00 \ ATOM 225 N LYS a 25 -22.385 18.113 79.923 1.00 -1.00 \ ATOM 226 CA LYS a 25 -22.820 19.221 80.767 1.00 -1.00 \ ATOM 227 C LYS a 25 -22.015 20.515 80.555 1.00 -1.00 \ ATOM 228 O LYS a 25 -21.038 20.563 79.793 1.00 -1.00 \ ATOM 229 CB LYS a 25 -22.744 18.813 82.234 1.00 -1.00 \ ATOM 230 CG LYS a 25 -24.072 18.796 82.941 1.00 -1.00 \ ATOM 231 CD LYS a 25 -23.905 18.290 84.376 1.00 -1.00 \ ATOM 232 CE LYS a 25 -22.885 17.148 84.448 1.00 -1.00 \ ATOM 233 NZ LYS a 25 -23.064 16.269 85.643 1.00 -1.00 \ """, "e4ujwa1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e4ujwa1_csv", state=0, origin=1) cmd.zoom("e4ujwa1_csv", animate=-1)