cmd.read_pdbstr("""\ ATOM 1 N MET a 1 -48.250 -4.052 78.717 1.00 -1.00 \ ATOM 2 CA MET a 1 -47.396 -4.484 79.799 1.00 -1.00 \ ATOM 3 C MET a 1 -47.915 -3.913 81.093 1.00 -1.00 \ ATOM 4 O MET a 1 -48.447 -2.818 81.092 1.00 -1.00 \ ATOM 5 CB MET a 1 -45.979 -4.028 79.547 1.00 -1.00 \ ATOM 6 CG MET a 1 -45.835 -2.538 79.408 1.00 -1.00 \ ATOM 7 SD MET a 1 -44.094 -2.110 79.261 1.00 -1.00 \ ATOM 8 CE MET a 1 -43.391 -3.154 80.544 1.00 -1.00 \ ATOM 9 N ARG a 2 -47.778 -4.663 82.180 1.00 0.39 \ ATOM 10 CA ARG a 2 -48.146 -4.203 83.514 1.00 0.39 \ ATOM 11 C ARG a 2 -47.804 -2.730 83.665 1.00 0.39 \ ATOM 12 O ARG a 2 -46.799 -2.271 83.145 1.00 0.39 \ ATOM 13 CB ARG a 2 -47.430 -5.065 84.571 1.00 0.39 \ ATOM 14 CG ARG a 2 -47.438 -4.555 86.013 1.00 0.39 \ ATOM 15 CD ARG a 2 -48.321 -5.385 86.946 1.00 0.39 \ ATOM 16 NE ARG a 2 -47.579 -6.279 87.836 1.00 0.39 \ ATOM 17 CZ ARG a 2 -47.673 -6.264 89.165 1.00 0.39 \ ATOM 18 NH1 ARG a 2 -48.471 -5.392 89.761 1.00 0.39 \ ATOM 19 NH2 ARG a 2 -46.974 -7.121 89.900 1.00 0.39 \ ATOM 20 N ALA a 3 -48.656 -1.969 84.319 1.00 0.39 \ ATOM 21 CA ALA a 3 -48.400 -0.554 84.488 1.00 0.39 \ ATOM 22 C ALA a 3 -47.077 -0.331 85.198 1.00 0.39 \ ATOM 23 O ALA a 3 -46.253 0.479 84.768 1.00 0.39 \ ATOM 24 CB ALA a 3 -49.520 0.095 85.268 1.00 0.39 \ ATOM 25 N LYS a 4 -46.866 -1.060 86.288 1.00 0.39 \ ATOM 26 CA LYS a 4 -45.724 -0.793 87.145 1.00 0.39 \ ATOM 27 C LYS a 4 -44.411 -1.192 86.477 1.00 0.39 \ ATOM 28 O LYS a 4 -43.351 -0.676 86.819 1.00 0.39 \ ATOM 29 CB LYS a 4 -45.888 -1.510 88.483 1.00 0.39 \ ATOM 30 CG LYS a 4 -45.298 -2.892 88.548 1.00 0.39 \ ATOM 31 CD LYS a 4 -44.803 -3.180 89.943 1.00 0.39 \ ATOM 32 CE LYS a 4 -45.908 -2.978 90.950 1.00 0.39 \ ATOM 33 NZ LYS a 4 -45.446 -3.170 92.359 1.00 0.39 \ ATOM 34 N TRP a 5 -44.480 -2.102 85.513 1.00 0.39 \ ATOM 35 CA TRP a 5 -43.296 -2.479 84.761 1.00 0.39 \ ATOM 36 C TRP a 5 -42.992 -1.440 83.714 1.00 0.39 \ ATOM 37 O TRP a 5 -41.855 -1.312 83.245 1.00 0.39 \ ATOM 38 CB TRP a 5 -43.467 -3.834 84.087 1.00 0.39 \ ATOM 39 CG TRP a 5 -43.650 -4.997 84.979 1.00 0.39 \ ATOM 40 CD1 TRP a 5 -44.285 -6.152 84.652 1.00 0.39 \ ATOM 41 CD2 TRP a 5 -43.198 -5.155 86.342 1.00 0.39 \ ATOM 42 NE1 TRP a 5 -44.276 -7.018 85.722 1.00 0.39 \ ATOM 43 CE2 TRP a 5 -43.613 -6.430 86.769 1.00 0.39 \ ATOM 44 CE3 TRP a 5 -42.498 -4.345 87.239 1.00 0.39 \ ATOM 45 CZ2 TRP a 5 -43.353 -6.912 88.045 1.00 0.39 \ ATOM 46 CZ3 TRP a 5 -42.243 -4.829 88.504 1.00 0.39 \ ATOM 47 CH2 TRP a 5 -42.682 -6.095 88.897 1.00 0.39 \ ATOM 48 N ARG a 6 -44.030 -0.725 83.319 1.00 0.39 \ ATOM 49 CA ARG a 6 -43.857 0.361 82.391 1.00 0.39 \ ATOM 50 C ARG a 6 -43.344 1.582 83.158 1.00 0.39 \ ATOM 51 O ARG a 6 -42.471 2.312 82.679 1.00 0.39 \ ATOM 52 CB ARG a 6 -45.161 0.654 81.653 1.00 0.39 \ ATOM 53 CG ARG a 6 -45.164 2.005 80.998 1.00 0.39 \ ATOM 54 CD ARG a 6 -45.396 1.973 79.495 1.00 0.39 \ ATOM 55 NE ARG a 6 -46.236 3.117 79.126 1.00 0.39 \ ATOM 56 CZ ARG a 6 -45.790 4.348 78.826 1.00 0.39 \ ATOM 57 NH1 ARG a 6 -44.472 4.638 78.810 1.00 0.39 \ ATOM 58 NH2 ARG a 6 -46.683 5.300 78.530 1.00 0.39 \ ATOM 59 N LYS a 7 -43.860 1.787 84.361 1.00 0.39 \ ATOM 60 CA LYS a 7 -43.353 2.864 85.193 1.00 0.39 \ ATOM 61 C LYS a 7 -41.843 2.675 85.436 1.00 0.39 \ ATOM 62 O LYS a 7 -41.074 3.635 85.436 1.00 0.39 \ ATOM 63 CB LYS a 7 -44.106 2.912 86.504 1.00 0.39 \ ATOM 64 CG LYS a 7 -43.669 4.016 87.410 1.00 0.39 \ ATOM 65 CD LYS a 7 -44.350 3.874 88.749 1.00 0.39 \ ATOM 66 CE LYS a 7 -44.817 5.213 89.243 1.00 0.39 \ ATOM 67 NZ LYS a 7 -45.727 5.080 90.385 1.00 0.39 \ ATOM 68 N LYS a 8 -41.422 1.424 85.615 1.00 0.39 \ ATOM 69 CA LYS a 8 -40.010 1.118 85.757 1.00 0.39 \ ATOM 70 C LYS a 8 -39.272 1.301 84.436 1.00 0.39 \ ATOM 71 O LYS a 8 -38.110 1.727 84.424 1.00 0.39 \ ATOM 72 CB LYS a 8 -39.817 -0.305 86.259 1.00 0.39 \ ATOM 73 CG LYS a 8 -38.375 -0.743 86.303 1.00 0.39 \ ATOM 74 CD LYS a 8 -38.273 -2.237 86.315 1.00 0.39 \ ATOM 75 CE LYS a 8 -38.620 -2.789 87.661 1.00 0.39 \ ATOM 76 NZ LYS a 8 -37.462 -2.763 88.592 1.00 0.39 \ ATOM 77 N ARG a 9 -39.948 0.974 83.327 1.00 0.39 \ ATOM 78 CA ARG a 9 -39.338 1.090 81.999 1.00 0.39 \ ATOM 79 C ARG a 9 -38.829 2.488 81.817 1.00 0.39 \ ATOM 80 O ARG a 9 -37.677 2.685 81.397 1.00 0.39 \ ATOM 81 CB ARG a 9 -40.307 0.780 80.877 1.00 0.39 \ ATOM 82 CG ARG a 9 -39.626 0.447 79.569 1.00 0.39 \ ATOM 83 CD ARG a 9 -40.623 0.617 78.448 1.00 0.39 \ ATOM 84 NE ARG a 9 -40.478 -0.226 77.249 1.00 0.39 \ ATOM 85 CZ ARG a 9 -40.940 -1.460 77.130 1.00 0.39 \ ATOM 86 NH1 ARG a 9 -41.525 -2.037 78.135 1.00 0.39 \ ATOM 87 NH2 ARG a 9 -40.798 -2.126 76.012 1.00 0.39 \ ATOM 88 N THR a 10 -39.675 3.463 82.161 1.00 -2.46 \ ATOM 89 CA THR a 10 -39.329 4.837 81.847 1.00 -2.46 \ ATOM 90 C THR a 10 -38.512 5.467 82.970 1.00 -2.46 \ ATOM 91 O THR a 10 -37.739 6.394 82.724 1.00 -2.46 \ ATOM 92 CB THR a 10 -40.568 5.669 81.528 1.00 -2.46 \ ATOM 93 OG1 THR a 10 -40.931 6.442 82.662 1.00 -2.46 \ ATOM 94 CG2 THR a 10 -41.717 4.779 81.090 1.00 -2.46 \ ATOM 95 N ARG a 11 -38.640 4.954 84.190 1.00 0.39 \ ATOM 96 CA ARG a 11 -37.732 5.390 85.247 1.00 0.39 \ ATOM 97 C ARG a 11 -36.277 5.179 84.745 1.00 0.39 \ ATOM 98 O ARG a 11 -35.419 6.074 84.837 1.00 0.39 \ ATOM 99 CB ARG a 11 -38.004 4.624 86.552 1.00 0.39 \ ATOM 100 CG ARG a 11 -38.389 5.452 87.773 1.00 0.39 \ ATOM 101 CD ARG a 11 -39.729 6.130 87.594 1.00 0.39 \ ATOM 102 NE ARG a 11 -40.420 6.519 88.844 1.00 0.39 \ ATOM 103 CZ ARG a 11 -40.829 5.669 89.797 1.00 0.39 \ ATOM 104 NH1 ARG a 11 -40.577 4.364 89.679 1.00 0.39 \ ATOM 105 NH2 ARG a 11 -41.465 6.119 90.877 1.00 0.39 \ ATOM 106 N ARG a 12 -36.022 4.011 84.167 1.00 0.39 \ ATOM 107 CA ARG a 12 -34.709 3.723 83.629 1.00 0.39 \ ATOM 108 C ARG a 12 -34.390 4.678 82.508 1.00 0.39 \ ATOM 109 O ARG a 12 -33.276 5.166 82.403 1.00 0.39 \ ATOM 110 CB ARG a 12 -34.624 2.291 83.109 1.00 0.39 \ ATOM 111 CG ARG a 12 -34.637 1.209 84.134 1.00 0.39 \ ATOM 112 CD ARG a 12 -35.002 -0.034 83.444 1.00 0.39 \ ATOM 113 NE ARG a 12 -35.059 -1.182 84.330 1.00 0.39 \ ATOM 114 CZ ARG a 12 -35.485 -2.379 83.942 1.00 0.39 \ ATOM 115 NH1 ARG a 12 -35.885 -2.549 82.696 1.00 0.39 \ ATOM 116 NH2 ARG a 12 -35.524 -3.392 84.792 1.00 0.39 \ ATOM 117 N LEU a 13 -35.379 4.937 81.665 1.00 0.39 \ ATOM 118 CA LEU a 13 -35.148 5.736 80.469 1.00 0.39 \ ATOM 119 C LEU a 13 -34.642 7.113 80.849 1.00 0.39 \ ATOM 120 O LEU a 13 -33.813 7.692 80.174 1.00 0.39 \ ATOM 121 CB LEU a 13 -36.425 5.864 79.631 1.00 0.39 \ ATOM 122 CG LEU a 13 -36.273 5.975 78.107 1.00 0.39 \ ATOM 123 CD1 LEU a 13 -37.428 6.723 77.563 1.00 0.39 \ ATOM 124 CD2 LEU a 13 -34.994 6.634 77.636 1.00 0.39 \ ATOM 125 N LYS a 14 -35.135 7.637 81.947 1.00 0.39 \ ATOM 126 CA LYS a 14 -34.761 8.985 82.279 1.00 0.39 \ ATOM 127 C LYS a 14 -33.330 8.989 82.809 1.00 0.39 \ ATOM 128 O LYS a 14 -32.581 9.953 82.596 1.00 0.39 \ ATOM 129 CB LYS a 14 -35.748 9.574 83.281 1.00 0.39 \ ATOM 130 CG LYS a 14 -37.174 9.450 82.817 1.00 0.39 \ ATOM 131 CD LYS a 14 -38.116 10.199 83.719 1.00 0.39 \ ATOM 132 CE LYS a 14 -38.430 9.423 84.977 1.00 0.39 \ ATOM 133 NZ LYS a 14 -39.470 10.127 85.800 1.00 0.39 \ ATOM 134 N ARG a 15 -32.953 7.890 83.468 1.00 0.39 \ ATOM 135 CA ARG a 15 -31.626 7.759 84.046 1.00 0.39 \ ATOM 136 C ARG a 15 -30.545 7.810 82.960 1.00 0.39 \ ATOM 137 O ARG a 15 -29.501 8.449 83.146 1.00 0.39 \ ATOM 138 CB ARG a 15 -31.522 6.468 84.833 1.00 0.39 \ ATOM 139 CG ARG a 15 -31.242 6.662 86.311 1.00 0.39 \ ATOM 140 CD ARG a 15 -30.466 5.457 86.898 1.00 0.39 \ ATOM 141 NE ARG a 15 -31.115 4.198 86.541 1.00 0.39 \ ATOM 142 CZ ARG a 15 -32.197 3.712 87.159 1.00 0.39 \ ATOM 143 NH1 ARG a 15 -32.747 4.379 88.177 1.00 0.39 \ ATOM 144 NH2 ARG a 15 -32.736 2.559 86.764 1.00 0.39 \ ATOM 145 N LYS a 16 -30.804 7.154 81.827 1.00 0.39 \ ATOM 146 CA LYS a 16 -29.888 7.181 80.689 1.00 0.39 \ ATOM 147 C LYS a 16 -29.775 8.574 80.061 1.00 0.39 \ ATOM 148 O LYS a 16 -28.670 9.019 79.671 1.00 0.39 \ ATOM 149 CB LYS a 16 -30.324 6.171 79.629 1.00 0.39 \ ATOM 150 CG LYS a 16 -29.501 4.877 79.680 1.00 0.39 \ ATOM 151 CD LYS a 16 -29.426 4.150 78.315 1.00 0.39 \ ATOM 152 CE LYS a 16 -28.018 4.288 77.631 1.00 0.39 \ ATOM 153 NZ LYS a 16 -27.631 5.698 77.213 1.00 0.39 \ ATOM 154 N ARG a 17 -30.914 9.260 79.964 1.00 0.39 \ ATOM 155 CA ARG a 17 -30.935 10.569 79.334 1.00 0.39 \ ATOM 156 C ARG a 17 -30.363 11.495 80.358 1.00 0.39 \ ATOM 157 O ARG a 17 -29.615 12.396 80.028 1.00 0.39 \ ATOM 158 CB ARG a 17 -32.348 10.977 78.873 1.00 0.39 \ ATOM 159 CG ARG a 17 -33.021 9.865 78.035 1.00 0.39 \ ATOM 160 CD ARG a 17 -34.185 10.241 77.124 1.00 0.39 \ ATOM 161 NE ARG a 17 -35.443 10.372 77.849 1.00 0.39 \ ATOM 162 CZ ARG a 17 -36.645 10.107 77.352 1.00 0.39 \ ATOM 163 NH1 ARG a 17 -36.803 9.653 76.121 1.00 0.39 \ ATOM 164 NH2 ARG a 17 -37.702 10.300 78.110 1.00 0.39 \ ATOM 165 N ARG a 18 -30.675 11.233 81.620 1.00 0.39 \ ATOM 166 CA ARG a 18 -30.004 11.952 82.691 1.00 0.39 \ ATOM 167 C ARG a 18 -28.512 11.756 82.506 1.00 0.39 \ ATOM 168 O ARG a 18 -27.794 12.741 82.460 1.00 0.39 \ ATOM 169 CB ARG a 18 -30.454 11.488 84.074 1.00 0.39 \ ATOM 170 CG ARG a 18 -30.420 12.562 85.128 1.00 0.39 \ ATOM 171 CD ARG a 18 -30.537 11.935 86.505 1.00 0.39 \ ATOM 172 NE ARG a 18 -31.691 11.019 86.575 1.00 0.39 \ ATOM 173 CZ ARG a 18 -31.986 10.250 87.634 1.00 0.39 \ ATOM 174 NH1 ARG a 18 -31.218 10.280 88.729 1.00 0.39 \ ATOM 175 NH2 ARG a 18 -33.050 9.446 87.609 1.00 0.39 \ ATOM 176 N LYS a 19 -28.054 10.512 82.333 1.00 0.39 \ ATOM 177 CA LYS a 19 -26.633 10.254 82.046 1.00 0.39 \ ATOM 178 C LYS a 19 -26.096 10.944 80.781 1.00 0.39 \ ATOM 179 O LYS a 19 -25.247 11.828 80.864 1.00 0.39 \ ATOM 180 CB LYS a 19 -26.363 8.755 81.936 1.00 0.39 \ ATOM 181 CG LYS a 19 -25.440 8.197 83.023 1.00 0.39 \ ATOM 182 CD LYS a 19 -26.198 8.059 84.351 1.00 0.39 \ ATOM 183 CE LYS a 19 -25.240 7.857 85.534 1.00 0.39 \ ATOM 184 NZ LYS a 19 -25.197 6.442 86.081 1.00 0.39 \ ATOM 185 N VAL a 20 -26.589 10.549 79.613 1.00 -2.46 \ ATOM 186 CA VAL a 20 -26.045 11.077 78.360 1.00 -2.46 \ ATOM 187 C VAL a 20 -25.965 12.603 78.376 1.00 -2.46 \ ATOM 188 O VAL a 20 -25.095 13.206 77.766 1.00 -2.46 \ ATOM 189 CB VAL a 20 -26.882 10.598 77.135 1.00 -2.46 \ ATOM 190 CG1 VAL a 20 -26.828 11.591 75.991 1.00 -2.46 \ ATOM 191 CG2 VAL a 20 -26.393 9.236 76.651 1.00 -2.46 \ ATOM 192 N ARG a 21 -26.859 13.235 79.112 1.00 0.39 \ ATOM 193 CA ARG a 21 -26.879 14.674 79.090 1.00 0.39 \ ATOM 194 C ARG a 21 -25.735 15.229 79.891 1.00 0.39 \ ATOM 195 O ARG a 21 -25.186 16.268 79.534 1.00 0.39 \ ATOM 196 CB ARG a 21 -28.197 15.221 79.609 1.00 0.39 \ ATOM 197 CG ARG a 21 -28.891 16.066 78.568 1.00 0.39 \ ATOM 198 CD ARG a 21 -30.069 16.784 79.123 1.00 0.39 \ ATOM 199 NE ARG a 21 -29.893 18.200 78.946 1.00 0.39 \ ATOM 200 CZ ARG a 21 -30.658 19.118 79.497 1.00 0.39 \ ATOM 201 NH1 ARG a 21 -30.401 20.392 79.275 1.00 0.39 \ ATOM 202 NH2 ARG a 21 -31.670 18.768 80.259 1.00 0.39 \ ATOM 203 N ALA a 22 -25.366 14.541 80.962 1.00 -2.46 \ ATOM 204 CA ALA a 22 -24.264 15.000 81.793 1.00 -2.46 \ ATOM 205 C ALA a 22 -22.951 15.102 80.993 1.00 -2.46 \ ATOM 206 O ALA a 22 -22.231 16.076 81.123 1.00 -2.46 \ ATOM 207 CB ALA a 22 -24.106 14.088 82.972 1.00 -2.46 \ ATOM 208 N ARG a 23 -22.672 14.090 80.168 1.00 0.39 \ ATOM 209 CA ARG a 23 -21.624 14.104 79.145 1.00 0.39 \ ATOM 210 C ARG a 23 -21.335 15.454 78.512 1.00 0.39 \ ATOM 211 O ARG a 23 -20.199 15.769 78.139 1.00 0.39 \ ATOM 212 CB ARG a 23 -22.000 13.182 77.999 1.00 0.39 \ ATOM 213 CG ARG a 23 -21.901 11.732 78.204 1.00 0.39 \ ATOM 214 CD ARG a 23 -21.902 11.095 76.831 1.00 0.39 \ ATOM 215 NE ARG a 23 -21.130 9.872 76.854 1.00 0.39 \ ATOM 216 CZ ARG a 23 -19.959 9.716 76.247 1.00 0.39 \ ATOM 217 NH1 ARG a 23 -19.322 8.563 76.361 1.00 0.39 \ ATOM 218 NH2 ARG a 23 -19.415 10.696 75.531 1.00 0.39 \ ATOM 219 N SER a 24 -22.390 16.222 78.334 1.00 -1.00 \ ATOM 220 CA SER a 24 -22.299 17.485 77.647 1.00 -1.00 \ ATOM 221 C SER a 24 -22.250 18.708 78.591 1.00 -1.00 \ ATOM 222 O SER a 24 -22.001 19.811 78.140 1.00 -1.00 \ ATOM 223 CB SER a 24 -23.478 17.593 76.680 1.00 -1.00 \ ATOM 224 OG SER a 24 -23.452 18.830 75.981 1.00 -1.00 \ ATOM 225 N LYS a 25 -22.502 18.504 79.882 1.00 -1.00 \ ATOM 226 CA LYS a 25 -22.515 19.587 80.874 1.00 -1.00 \ ATOM 227 C LYS a 25 -21.524 20.720 80.603 1.00 -1.00 \ ATOM 228 O LYS a 25 -21.909 21.884 80.498 1.00 -1.00 \ ATOM 229 CB LYS a 25 -22.216 19.038 82.266 1.00 -1.00 \ ATOM 230 CG LYS a 25 -23.408 18.581 83.018 1.00 -1.00 \ ATOM 231 CD LYS a 25 -23.122 18.659 84.513 1.00 -1.00 \ ATOM 232 CE LYS a 25 -22.347 17.451 85.052 1.00 -1.00 \ ATOM 233 NZ LYS a 25 -21.986 17.677 86.507 1.00 -1.00 \ """, "e4uk1a1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e4uk1a1_csv", state=0, origin=1) cmd.zoom("e4uk1a1_csv", animate=-1)