cmd.read_pdbstr("""\ ATOM 1 N MET a 1 -47.889 -4.001 77.996 1.00 -1.00 \ ATOM 2 CA MET a 1 -47.058 -4.443 79.105 1.00 -1.00 \ ATOM 3 C MET a 1 -47.624 -3.962 80.417 1.00 -1.00 \ ATOM 4 O MET a 1 -48.246 -2.911 80.460 1.00 -1.00 \ ATOM 5 CB MET a 1 -45.647 -3.924 78.934 1.00 -1.00 \ ATOM 6 CG MET a 1 -45.522 -2.432 79.104 1.00 -1.00 \ ATOM 7 SD MET a 1 -43.785 -1.998 79.097 1.00 -1.00 \ ATOM 8 CE MET a 1 -43.140 -3.345 80.086 1.00 -1.00 \ ATOM 9 N ARG a 2 -47.405 -4.731 81.475 1.00 0.39 \ ATOM 10 CA ARG a 2 -47.864 -4.377 82.808 1.00 0.39 \ ATOM 11 C ARG a 2 -47.680 -2.896 83.098 1.00 0.39 \ ATOM 12 O ARG a 2 -46.767 -2.271 82.574 1.00 0.39 \ ATOM 13 CB ARG a 2 -47.119 -5.217 83.842 1.00 0.39 \ ATOM 14 CG ARG a 2 -47.234 -4.721 85.272 1.00 0.39 \ ATOM 15 CD ARG a 2 -48.097 -5.597 86.117 1.00 0.39 \ ATOM 16 NE ARG a 2 -47.364 -6.317 87.149 1.00 0.39 \ ATOM 17 CZ ARG a 2 -47.570 -6.135 88.449 1.00 0.39 \ ATOM 18 NH1 ARG a 2 -48.465 -5.245 88.852 1.00 0.39 \ ATOM 19 NH2 ARG a 2 -46.898 -6.841 89.350 1.00 0.39 \ ATOM 20 N ALA a 3 -48.563 -2.319 83.899 1.00 0.39 \ ATOM 21 CA ALA a 3 -48.482 -0.902 84.214 1.00 0.39 \ ATOM 22 C ALA a 3 -47.195 -0.562 84.971 1.00 0.39 \ ATOM 23 O ALA a 3 -46.425 0.295 84.528 1.00 0.39 \ ATOM 24 CB ALA a 3 -49.687 -0.492 85.004 1.00 0.39 \ ATOM 25 N LYS a 4 -47.002 -1.220 86.118 1.00 0.39 \ ATOM 26 CA LYS a 4 -45.729 -1.326 86.862 1.00 0.39 \ ATOM 27 C LYS a 4 -44.467 -1.283 86.027 1.00 0.39 \ ATOM 28 O LYS a 4 -43.632 -0.417 86.169 1.00 0.39 \ ATOM 29 CB LYS a 4 -45.710 -2.648 87.627 1.00 0.39 \ ATOM 30 CG LYS a 4 -44.921 -2.669 88.882 1.00 0.39 \ ATOM 31 CD LYS a 4 -45.805 -2.283 90.038 1.00 0.39 \ ATOM 32 CE LYS a 4 -45.820 -3.360 91.087 1.00 0.39 \ ATOM 33 NZ LYS a 4 -44.480 -3.493 91.701 1.00 0.39 \ ATOM 34 N TRP a 5 -44.337 -2.267 85.163 1.00 0.39 \ ATOM 35 CA TRP a 5 -43.128 -2.475 84.411 1.00 0.39 \ ATOM 36 C TRP a 5 -42.937 -1.417 83.352 1.00 0.39 \ ATOM 37 O TRP a 5 -41.821 -1.226 82.857 1.00 0.39 \ ATOM 38 CB TRP a 5 -43.122 -3.855 83.746 1.00 0.39 \ ATOM 39 CG TRP a 5 -43.337 -5.068 84.631 1.00 0.39 \ ATOM 40 CD1 TRP a 5 -43.842 -6.269 84.223 1.00 0.39 \ ATOM 41 CD2 TRP a 5 -43.070 -5.212 86.042 1.00 0.39 \ ATOM 42 NE1 TRP a 5 -43.896 -7.150 85.273 1.00 0.39 \ ATOM 43 CE2 TRP a 5 -43.428 -6.526 86.400 1.00 0.39 \ ATOM 44 CE3 TRP a 5 -42.584 -4.364 87.033 1.00 0.39 \ ATOM 45 CZ2 TRP a 5 -43.301 -7.009 87.706 1.00 0.39 \ ATOM 46 CZ3 TRP a 5 -42.457 -4.854 88.324 1.00 0.39 \ ATOM 47 CH2 TRP a 5 -42.818 -6.158 88.648 1.00 0.39 \ ATOM 48 N ARG a 6 -44.012 -0.741 82.978 1.00 0.39 \ ATOM 49 CA ARG a 6 -43.875 0.280 81.965 1.00 0.39 \ ATOM 50 C ARG a 6 -43.403 1.552 82.618 1.00 0.39 \ ATOM 51 O ARG a 6 -42.780 2.389 81.978 1.00 0.39 \ ATOM 52 CB ARG a 6 -45.177 0.505 81.228 1.00 0.39 \ ATOM 53 CG ARG a 6 -45.028 1.376 79.984 1.00 0.39 \ ATOM 54 CD ARG a 6 -46.331 1.386 79.176 1.00 0.39 \ ATOM 55 NE ARG a 6 -46.783 2.725 78.776 1.00 0.39 \ ATOM 56 CZ ARG a 6 -46.096 3.571 77.994 1.00 0.39 \ ATOM 57 NH1 ARG a 6 -44.873 3.260 77.527 1.00 0.39 \ ATOM 58 NH2 ARG a 6 -46.644 4.750 77.679 1.00 0.39 \ ATOM 59 N LYS a 7 -43.706 1.681 83.903 1.00 0.39 \ ATOM 60 CA LYS a 7 -43.231 2.793 84.712 1.00 0.39 \ ATOM 61 C LYS a 7 -41.771 2.605 85.041 1.00 0.39 \ ATOM 62 O LYS a 7 -41.024 3.560 85.128 1.00 0.39 \ ATOM 63 CB LYS a 7 -44.044 2.901 85.980 1.00 0.39 \ ATOM 64 CG LYS a 7 -43.614 3.967 86.903 1.00 0.39 \ ATOM 65 CD LYS a 7 -44.519 3.961 88.099 1.00 0.39 \ ATOM 66 CE LYS a 7 -43.981 4.827 89.206 1.00 0.39 \ ATOM 67 NZ LYS a 7 -45.002 4.990 90.259 1.00 0.39 \ ATOM 68 N LYS a 8 -41.368 1.355 85.230 1.00 0.39 \ ATOM 69 CA LYS a 8 -39.958 1.005 85.331 1.00 0.39 \ ATOM 70 C LYS a 8 -39.327 1.070 83.946 1.00 0.39 \ ATOM 71 O LYS a 8 -38.153 1.397 83.813 1.00 0.39 \ ATOM 72 CB LYS a 8 -39.774 -0.384 85.937 1.00 0.39 \ ATOM 73 CG LYS a 8 -38.340 -0.830 86.037 1.00 0.39 \ ATOM 74 CD LYS a 8 -38.219 -2.337 85.975 1.00 0.39 \ ATOM 75 CE LYS a 8 -38.558 -2.999 87.291 1.00 0.39 \ ATOM 76 NZ LYS a 8 -37.416 -3.085 88.248 1.00 0.39 \ ATOM 77 N ARG a 9 -40.089 0.751 82.903 1.00 0.39 \ ATOM 78 CA ARG a 9 -39.541 0.877 81.561 1.00 0.39 \ ATOM 79 C ARG a 9 -39.099 2.294 81.366 1.00 0.39 \ ATOM 80 O ARG a 9 -37.931 2.539 81.076 1.00 0.39 \ ATOM 81 CB ARG a 9 -40.542 0.491 80.489 1.00 0.39 \ ATOM 82 CG ARG a 9 -40.251 -0.852 79.865 1.00 0.39 \ ATOM 83 CD ARG a 9 -39.564 -0.696 78.533 1.00 0.39 \ ATOM 84 NE ARG a 9 -40.489 -0.662 77.403 1.00 0.39 \ ATOM 85 CZ ARG a 9 -40.923 -1.736 76.757 1.00 0.39 \ ATOM 86 NH1 ARG a 9 -40.543 -2.942 77.132 1.00 0.39 \ ATOM 87 NH2 ARG a 9 -41.744 -1.601 75.739 1.00 0.39 \ ATOM 88 N THR a 10 -40.019 3.226 81.579 1.00 -2.46 \ ATOM 89 CA THR a 10 -39.711 4.607 81.302 1.00 -2.46 \ ATOM 90 C THR a 10 -38.745 5.157 82.341 1.00 -2.46 \ ATOM 91 O THR a 10 -37.865 5.926 81.999 1.00 -2.46 \ ATOM 92 CB THR a 10 -40.978 5.458 81.207 1.00 -2.46 \ ATOM 93 OG1 THR a 10 -40.620 6.837 81.166 1.00 -2.46 \ ATOM 94 CG2 THR a 10 -41.881 5.232 82.377 1.00 -2.46 \ ATOM 95 N ARG a 11 -38.862 4.738 83.593 1.00 0.39 \ ATOM 96 CA ARG a 11 -37.920 5.174 84.633 1.00 0.39 \ ATOM 97 C ARG a 11 -36.471 4.989 84.169 1.00 0.39 \ ATOM 98 O ARG a 11 -35.672 5.909 84.217 1.00 0.39 \ ATOM 99 CB ARG a 11 -38.156 4.400 85.948 1.00 0.39 \ ATOM 100 CG ARG a 11 -38.473 5.237 87.188 1.00 0.39 \ ATOM 101 CD ARG a 11 -39.936 5.554 87.266 1.00 0.39 \ ATOM 102 NE ARG a 11 -40.389 6.142 88.536 1.00 0.39 \ ATOM 103 CZ ARG a 11 -40.690 5.458 89.647 1.00 0.39 \ ATOM 104 NH1 ARG a 11 -40.538 4.141 89.688 1.00 0.39 \ ATOM 105 NH2 ARG a 11 -41.136 6.091 90.729 1.00 0.39 \ ATOM 106 N ARG a 12 -36.165 3.785 83.699 1.00 0.39 \ ATOM 107 CA ARG a 12 -34.835 3.404 83.232 1.00 0.39 \ ATOM 108 C ARG a 12 -34.363 4.331 82.143 1.00 0.39 \ ATOM 109 O ARG a 12 -33.294 4.904 82.216 1.00 0.39 \ ATOM 110 CB ARG a 12 -34.846 1.970 82.693 1.00 0.39 \ ATOM 111 CG ARG a 12 -34.964 0.851 83.716 1.00 0.39 \ ATOM 112 CD ARG a 12 -34.601 -0.452 83.037 1.00 0.39 \ ATOM 113 NE ARG a 12 -34.923 -1.631 83.825 1.00 0.39 \ ATOM 114 CZ ARG a 12 -35.570 -2.682 83.338 1.00 0.39 \ ATOM 115 NH1 ARG a 12 -35.969 -2.681 82.069 1.00 0.39 \ ATOM 116 NH2 ARG a 12 -35.824 -3.727 84.113 1.00 0.39 \ ATOM 117 N LEU a 13 -35.204 4.445 81.132 1.00 0.39 \ ATOM 118 CA LEU a 13 -34.946 5.242 79.958 1.00 0.39 \ ATOM 119 C LEU a 13 -34.545 6.660 80.333 1.00 0.39 \ ATOM 120 O LEU a 13 -33.687 7.230 79.694 1.00 0.39 \ ATOM 121 CB LEU a 13 -36.183 5.210 79.047 1.00 0.39 \ ATOM 122 CG LEU a 13 -36.380 6.097 77.819 1.00 0.39 \ ATOM 123 CD1 LEU a 13 -36.876 7.433 78.263 1.00 0.39 \ ATOM 124 CD2 LEU a 13 -35.135 6.266 76.977 1.00 0.39 \ ATOM 125 N LYS a 14 -35.136 7.220 81.381 1.00 0.39 \ ATOM 126 CA LYS a 14 -34.778 8.572 81.810 1.00 0.39 \ ATOM 127 C LYS a 14 -33.399 8.608 82.425 1.00 0.39 \ ATOM 128 O LYS a 14 -32.627 9.517 82.162 1.00 0.39 \ ATOM 129 CB LYS a 14 -35.777 9.122 82.818 1.00 0.39 \ ATOM 130 CG LYS a 14 -37.121 9.400 82.244 1.00 0.39 \ ATOM 131 CD LYS a 14 -37.761 10.571 82.947 1.00 0.39 \ ATOM 132 CE LYS a 14 -38.643 10.183 84.121 1.00 0.39 \ ATOM 133 NZ LYS a 14 -39.322 11.407 84.654 1.00 0.39 \ ATOM 134 N ARG a 15 -33.103 7.613 83.254 1.00 0.39 \ ATOM 135 CA ARG a 15 -31.848 7.547 83.979 1.00 0.39 \ ATOM 136 C ARG a 15 -30.675 7.543 82.991 1.00 0.39 \ ATOM 137 O ARG a 15 -29.607 8.080 83.287 1.00 0.39 \ ATOM 138 CB ARG a 15 -31.841 6.317 84.896 1.00 0.39 \ ATOM 139 CG ARG a 15 -30.504 6.026 85.559 1.00 0.39 \ ATOM 140 CD ARG a 15 -30.570 4.921 86.631 1.00 0.39 \ ATOM 141 NE ARG a 15 -31.317 3.735 86.215 1.00 0.39 \ ATOM 142 CZ ARG a 15 -32.370 3.236 86.870 1.00 0.39 \ ATOM 143 NH1 ARG a 15 -32.817 3.810 87.997 1.00 0.39 \ ATOM 144 NH2 ARG a 15 -32.985 2.150 86.398 1.00 0.39 \ ATOM 145 N LYS a 16 -30.894 6.988 81.798 1.00 0.39 \ ATOM 146 CA LYS a 16 -29.882 6.974 80.742 1.00 0.39 \ ATOM 147 C LYS a 16 -29.858 8.251 79.912 1.00 0.39 \ ATOM 148 O LYS a 16 -28.780 8.724 79.566 1.00 0.39 \ ATOM 149 CB LYS a 16 -30.085 5.785 79.810 1.00 0.39 \ ATOM 150 CG LYS a 16 -29.014 5.675 78.736 1.00 0.39 \ ATOM 151 CD LYS a 16 -28.459 4.259 78.638 1.00 0.39 \ ATOM 152 CE LYS a 16 -27.015 4.246 78.115 1.00 0.39 \ ATOM 153 NZ LYS a 16 -26.939 3.985 76.634 1.00 0.39 \ ATOM 154 N ARG a 17 -31.025 8.799 79.569 1.00 0.39 \ ATOM 155 CA ARG a 17 -31.063 10.070 78.857 1.00 0.39 \ ATOM 156 C ARG a 17 -30.296 11.046 79.700 1.00 0.39 \ ATOM 157 O ARG a 17 -29.574 11.879 79.195 1.00 0.39 \ ATOM 158 CB ARG a 17 -32.488 10.602 78.628 1.00 0.39 \ ATOM 159 CG ARG a 17 -33.536 9.627 78.058 1.00 0.39 \ ATOM 160 CD ARG a 17 -34.289 10.181 76.853 1.00 0.39 \ ATOM 161 NE ARG a 17 -35.721 9.959 76.955 1.00 0.39 \ ATOM 162 CZ ARG a 17 -36.566 9.986 75.924 1.00 0.39 \ ATOM 163 NH1 ARG a 17 -36.122 10.224 74.676 1.00 0.39 \ ATOM 164 NH2 ARG a 17 -37.868 9.762 76.143 1.00 0.39 \ ATOM 165 N ARG a 18 -30.467 10.926 81.007 1.00 0.39 \ ATOM 166 CA ARG a 18 -29.718 11.719 81.959 1.00 0.39 \ ATOM 167 C ARG a 18 -28.241 11.503 81.750 1.00 0.39 \ ATOM 168 O ARG a 18 -27.521 12.455 81.467 1.00 0.39 \ ATOM 169 CB ARG a 18 -30.109 11.358 83.383 1.00 0.39 \ ATOM 170 CG ARG a 18 -30.588 12.515 84.195 1.00 0.39 \ ATOM 171 CD ARG a 18 -30.792 12.068 85.611 1.00 0.39 \ ATOM 172 NE ARG a 18 -31.954 11.196 85.731 1.00 0.39 \ ATOM 173 CZ ARG a 18 -32.263 10.523 86.841 1.00 0.39 \ ATOM 174 NH1 ARG a 18 -31.465 10.635 87.910 1.00 0.39 \ ATOM 175 NH2 ARG a 18 -33.353 9.737 86.884 1.00 0.39 \ ATOM 176 N LYS a 19 -27.799 10.251 81.873 1.00 0.39 \ ATOM 177 CA LYS a 19 -26.392 9.895 81.688 1.00 0.39 \ ATOM 178 C LYS a 19 -25.808 10.560 80.438 1.00 0.39 \ ATOM 179 O LYS a 19 -24.804 11.251 80.504 1.00 0.39 \ ATOM 180 CB LYS a 19 -26.231 8.378 81.601 1.00 0.39 \ ATOM 181 CG LYS a 19 -25.652 7.716 82.847 1.00 0.39 \ ATOM 182 CD LYS a 19 -26.748 7.068 83.701 1.00 0.39 \ ATOM 183 CE LYS a 19 -26.223 6.521 85.048 1.00 0.39 \ ATOM 184 NZ LYS a 19 -25.455 5.221 84.981 1.00 0.39 \ ATOM 185 N VAL a 20 -26.476 10.381 79.310 1.00 -2.46 \ ATOM 186 CA VAL a 20 -26.044 10.967 78.066 1.00 -2.46 \ ATOM 187 C VAL a 20 -26.007 12.487 78.087 1.00 -2.46 \ ATOM 188 O VAL a 20 -25.141 13.097 77.484 1.00 -2.46 \ ATOM 189 CB VAL a 20 -26.941 10.492 76.940 1.00 -2.46 \ ATOM 190 CG1 VAL a 20 -27.124 11.563 75.878 1.00 -2.46 \ ATOM 191 CG2 VAL a 20 -26.387 9.217 76.348 1.00 -2.46 \ ATOM 192 N ARG a 21 -26.925 13.133 78.774 1.00 0.39 \ ATOM 193 CA ARG a 21 -26.892 14.581 78.731 1.00 0.39 \ ATOM 194 C ARG a 21 -25.734 15.076 79.559 1.00 0.39 \ ATOM 195 O ARG a 21 -25.122 16.089 79.243 1.00 0.39 \ ATOM 196 CB ARG a 21 -28.193 15.190 79.221 1.00 0.39 \ ATOM 197 CG ARG a 21 -29.061 15.653 78.096 1.00 0.39 \ ATOM 198 CD ARG a 21 -30.205 16.450 78.609 1.00 0.39 \ ATOM 199 NE ARG a 21 -30.022 17.871 78.396 1.00 0.39 \ ATOM 200 CZ ARG a 21 -30.713 18.804 79.036 1.00 0.39 \ ATOM 201 NH1 ARG a 21 -30.493 20.081 78.775 1.00 0.39 \ ATOM 202 NH2 ARG a 21 -31.629 18.465 79.935 1.00 0.39 \ ATOM 203 N ALA a 22 -25.416 14.340 80.610 1.00 -2.46 \ ATOM 204 CA ALA a 22 -24.335 14.728 81.476 1.00 -2.46 \ ATOM 205 C ALA a 22 -23.005 14.696 80.737 1.00 -2.46 \ ATOM 206 O ALA a 22 -22.073 15.397 81.122 1.00 -2.46 \ ATOM 207 CB ALA a 22 -24.293 13.834 82.680 1.00 -2.46 \ ATOM 208 N ARG a 23 -22.916 13.892 79.678 1.00 0.39 \ ATOM 209 CA ARG a 23 -21.697 13.789 78.902 1.00 0.39 \ ATOM 210 C ARG a 23 -21.422 15.108 78.206 1.00 0.39 \ ATOM 211 O ARG a 23 -20.295 15.401 77.818 1.00 0.39 \ ATOM 212 CB ARG a 23 -21.798 12.670 77.880 1.00 0.39 \ ATOM 213 CG ARG a 23 -22.054 11.280 78.454 1.00 0.39 \ ATOM 214 CD ARG a 23 -22.369 10.241 77.336 1.00 0.39 \ ATOM 215 NE ARG a 23 -21.187 9.531 76.865 1.00 0.39 \ ATOM 216 CZ ARG a 23 -20.324 10.000 75.962 1.00 0.39 \ ATOM 217 NH1 ARG a 23 -19.261 9.281 75.624 1.00 0.39 \ ATOM 218 NH2 ARG a 23 -20.503 11.187 75.401 1.00 0.39 \ ATOM 219 N SER a 24 -22.460 15.921 78.082 1.00 -1.00 \ ATOM 220 CA SER a 24 -22.402 17.137 77.286 1.00 -1.00 \ ATOM 221 C SER a 24 -22.147 18.407 78.072 1.00 -1.00 \ ATOM 222 O SER a 24 -21.866 19.444 77.492 1.00 -1.00 \ ATOM 223 CB SER a 24 -23.713 17.303 76.520 1.00 -1.00 \ ATOM 224 OG SER a 24 -23.568 18.238 75.465 1.00 -1.00 \ ATOM 225 N LYS a 25 -22.267 18.338 79.390 1.00 -1.00 \ ATOM 226 CA LYS a 25 -22.278 19.542 80.224 1.00 -1.00 \ ATOM 227 C LYS a 25 -21.086 20.469 79.988 1.00 -1.00 \ ATOM 228 O LYS a 25 -19.973 20.012 79.686 1.00 -1.00 \ ATOM 229 CB LYS a 25 -22.331 19.152 81.696 1.00 -1.00 \ ATOM 230 CG LYS a 25 -23.378 18.131 81.992 1.00 -1.00 \ ATOM 231 CD LYS a 25 -23.912 18.321 83.395 1.00 -1.00 \ ATOM 232 CE LYS a 25 -22.846 18.125 84.484 1.00 -1.00 \ ATOM 233 NZ LYS a 25 -23.459 18.254 85.852 1.00 -1.00 \ """, "e4ukra1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e4ukra1_csv", state=0, origin=1) cmd.zoom("e4ukra1_csv", animate=-1)