cmd.read_pdbstr("""\ ATOM 1 N MET a 1 -47.862 -3.680 78.366 1.00 -1.00 \ ATOM 2 CA MET a 1 -47.178 -4.366 79.450 1.00 -1.00 \ ATOM 3 C MET a 1 -47.782 -3.968 80.784 1.00 -1.00 \ ATOM 4 O MET a 1 -48.393 -2.908 80.884 1.00 -1.00 \ ATOM 5 CB MET a 1 -45.689 -4.037 79.414 1.00 -1.00 \ ATOM 6 CG MET a 1 -45.392 -2.547 79.415 1.00 -1.00 \ ATOM 7 SD MET a 1 -43.657 -2.222 79.042 1.00 -1.00 \ ATOM 8 CE MET a 1 -42.922 -3.360 80.218 1.00 -1.00 \ ATOM 9 N ARG a 2 -47.615 -4.826 81.790 1.00 0.39 \ ATOM 10 CA ARG a 2 -48.036 -4.529 83.159 1.00 0.39 \ ATOM 11 C ARG a 2 -47.699 -3.090 83.431 1.00 0.39 \ ATOM 12 O ARG a 2 -46.618 -2.638 83.097 1.00 0.39 \ ATOM 13 CB ARG a 2 -47.357 -5.470 84.173 1.00 0.39 \ ATOM 14 CG ARG a 2 -47.130 -4.900 85.570 1.00 0.39 \ ATOM 15 CD ARG a 2 -48.028 -5.507 86.645 1.00 0.39 \ ATOM 16 NE ARG a 2 -47.367 -6.520 87.475 1.00 0.39 \ ATOM 17 CZ ARG a 2 -47.507 -6.618 88.804 1.00 0.39 \ ATOM 18 NH1 ARG a 2 -48.264 -5.748 89.470 1.00 0.39 \ ATOM 19 NH2 ARG a 2 -46.883 -7.581 89.479 1.00 0.39 \ ATOM 20 N ALA a 3 -48.661 -2.360 83.966 1.00 0.39 \ ATOM 21 CA ALA a 3 -48.531 -0.929 84.163 1.00 0.39 \ ATOM 22 C ALA a 3 -47.244 -0.589 84.868 1.00 0.39 \ ATOM 23 O ALA a 3 -46.535 0.302 84.429 1.00 0.39 \ ATOM 24 CB ALA a 3 -49.737 -0.388 84.948 1.00 0.39 \ ATOM 25 N LYS a 4 -46.929 -1.335 85.925 1.00 0.39 \ ATOM 26 CA LYS a 4 -45.813 -1.024 86.817 1.00 0.39 \ ATOM 27 C LYS a 4 -44.432 -1.298 86.215 1.00 0.39 \ ATOM 28 O LYS a 4 -43.460 -0.653 86.569 1.00 0.39 \ ATOM 29 CB LYS a 4 -45.967 -1.800 88.130 1.00 0.39 \ ATOM 30 CG LYS a 4 -44.958 -2.914 88.349 1.00 0.39 \ ATOM 31 CD LYS a 4 -44.436 -2.891 89.774 1.00 0.39 \ ATOM 32 CE LYS a 4 -45.494 -3.268 90.809 1.00 0.39 \ ATOM 33 NZ LYS a 4 -44.970 -3.282 92.218 1.00 0.39 \ ATOM 34 N TRP a 5 -44.352 -2.255 85.305 1.00 0.39 \ ATOM 35 CA TRP a 5 -43.110 -2.525 84.611 1.00 0.39 \ ATOM 36 C TRP a 5 -42.910 -1.506 83.503 1.00 0.39 \ ATOM 37 O TRP a 5 -41.830 -1.404 82.929 1.00 0.39 \ ATOM 38 CB TRP a 5 -43.084 -3.936 84.013 1.00 0.39 \ ATOM 39 CG TRP a 5 -43.305 -5.093 84.946 1.00 0.39 \ ATOM 40 CD1 TRP a 5 -43.954 -6.245 84.639 1.00 0.39 \ ATOM 41 CD2 TRP a 5 -42.881 -5.231 86.314 1.00 0.39 \ ATOM 42 NE1 TRP a 5 -43.966 -7.090 85.718 1.00 0.39 \ ATOM 43 CE2 TRP a 5 -43.312 -6.490 86.758 1.00 0.39 \ ATOM 44 CE3 TRP a 5 -42.192 -4.416 87.202 1.00 0.39 \ ATOM 45 CZ2 TRP a 5 -43.074 -6.951 88.047 1.00 0.39 \ ATOM 46 CZ3 TRP a 5 -41.955 -4.886 88.486 1.00 0.39 \ ATOM 47 CH2 TRP a 5 -42.408 -6.132 88.895 1.00 0.39 \ ATOM 48 N ARG a 6 -43.953 -0.769 83.171 1.00 0.39 \ ATOM 49 CA ARG a 6 -43.792 0.257 82.175 1.00 0.39 \ ATOM 50 C ARG a 6 -43.235 1.490 82.864 1.00 0.39 \ ATOM 51 O ARG a 6 -42.418 2.232 82.303 1.00 0.39 \ ATOM 52 CB ARG a 6 -45.107 0.564 81.475 1.00 0.39 \ ATOM 53 CG ARG a 6 -44.962 1.715 80.511 1.00 0.39 \ ATOM 54 CD ARG a 6 -45.768 1.548 79.261 1.00 0.39 \ ATOM 55 NE ARG a 6 -46.435 2.810 78.939 1.00 0.39 \ ATOM 56 CZ ARG a 6 -45.846 3.876 78.369 1.00 0.39 \ ATOM 57 NH1 ARG a 6 -44.538 3.864 78.036 1.00 0.39 \ ATOM 58 NH2 ARG a 6 -46.583 4.973 78.134 1.00 0.39 \ ATOM 59 N LYS a 7 -43.680 1.685 84.099 1.00 0.39 \ ATOM 60 CA LYS a 7 -43.153 2.730 84.949 1.00 0.39 \ ATOM 61 C LYS a 7 -41.645 2.536 85.115 1.00 0.39 \ ATOM 62 O LYS a 7 -40.871 3.473 84.992 1.00 0.39 \ ATOM 63 CB LYS a 7 -43.859 2.713 86.299 1.00 0.39 \ ATOM 64 CG LYS a 7 -43.578 3.926 87.160 1.00 0.39 \ ATOM 65 CD LYS a 7 -43.771 3.600 88.624 1.00 0.39 \ ATOM 66 CE LYS a 7 -44.115 4.828 89.417 1.00 0.39 \ ATOM 67 NZ LYS a 7 -45.583 5.119 89.396 1.00 0.39 \ ATOM 68 N LYS a 8 -41.241 1.297 85.370 1.00 0.39 \ ATOM 69 CA LYS a 8 -39.834 0.938 85.508 1.00 0.39 \ ATOM 70 C LYS a 8 -39.080 1.039 84.173 1.00 0.39 \ ATOM 71 O LYS a 8 -37.906 1.430 84.125 1.00 0.39 \ ATOM 72 CB LYS a 8 -39.712 -0.475 86.079 1.00 0.39 \ ATOM 73 CG LYS a 8 -38.294 -0.991 86.166 1.00 0.39 \ ATOM 74 CD LYS a 8 -38.275 -2.509 86.168 1.00 0.39 \ ATOM 75 CE LYS a 8 -38.446 -3.048 87.559 1.00 0.39 \ ATOM 76 NZ LYS a 8 -37.343 -2.621 88.456 1.00 0.39 \ ATOM 77 N ARG a 9 -39.756 0.677 83.089 1.00 0.39 \ ATOM 78 CA ARG a 9 -39.157 0.809 81.781 1.00 0.39 \ ATOM 79 C ARG a 9 -38.695 2.239 81.601 1.00 0.39 \ ATOM 80 O ARG a 9 -37.540 2.481 81.244 1.00 0.39 \ ATOM 81 CB ARG a 9 -40.131 0.430 80.679 1.00 0.39 \ ATOM 82 CG ARG a 9 -39.508 -0.330 79.537 1.00 0.39 \ ATOM 83 CD ARG a 9 -39.991 0.262 78.244 1.00 0.39 \ ATOM 84 NE ARG a 9 -40.604 -0.592 77.205 1.00 0.39 \ ATOM 85 CZ ARG a 9 -40.655 -1.923 77.124 1.00 0.39 \ ATOM 86 NH1 ARG a 9 -40.133 -2.731 78.033 1.00 0.39 \ ATOM 87 NH2 ARG a 9 -41.245 -2.458 76.078 1.00 0.39 \ ATOM 88 N THR a 10 -39.567 3.204 81.868 1.00 -2.46 \ ATOM 89 CA THR a 10 -39.160 4.557 81.550 1.00 -2.46 \ ATOM 90 C THR a 10 -38.260 5.127 82.627 1.00 -2.46 \ ATOM 91 O THR a 10 -37.480 6.038 82.353 1.00 -2.46 \ ATOM 92 CB THR a 10 -40.338 5.494 81.340 1.00 -2.46 \ ATOM 93 OG1 THR a 10 -40.683 6.094 82.581 1.00 -2.46 \ ATOM 94 CG2 THR a 10 -41.524 4.748 80.750 1.00 -2.46 \ ATOM 95 N ARG a 11 -38.336 4.587 83.841 1.00 0.39 \ ATOM 96 CA ARG a 11 -37.494 5.108 84.917 1.00 0.39 \ ATOM 97 C ARG a 11 -36.045 4.985 84.456 1.00 0.39 \ ATOM 98 O ARG a 11 -35.264 5.930 84.527 1.00 0.39 \ ATOM 99 CB ARG a 11 -37.732 4.354 86.232 1.00 0.39 \ ATOM 100 CG ARG a 11 -38.039 5.237 87.443 1.00 0.39 \ ATOM 101 CD ARG a 11 -39.379 5.887 87.275 1.00 0.39 \ ATOM 102 NE ARG a 11 -40.099 6.231 88.509 1.00 0.39 \ ATOM 103 CZ ARG a 11 -40.425 5.387 89.494 1.00 0.39 \ ATOM 104 NH1 ARG a 11 -40.037 4.112 89.447 1.00 0.39 \ ATOM 105 NH2 ARG a 11 -41.126 5.826 90.546 1.00 0.39 \ ATOM 106 N ARG a 12 -35.729 3.806 83.936 1.00 0.39 \ ATOM 107 CA ARG a 12 -34.417 3.516 83.410 1.00 0.39 \ ATOM 108 C ARG a 12 -34.117 4.493 82.295 1.00 0.39 \ ATOM 109 O ARG a 12 -33.124 5.196 82.323 1.00 0.39 \ ATOM 110 CB ARG a 12 -34.359 2.083 82.891 1.00 0.39 \ ATOM 111 CG ARG a 12 -34.785 1.013 83.865 1.00 0.39 \ ATOM 112 CD ARG a 12 -34.670 -0.300 83.183 1.00 0.39 \ ATOM 113 NE ARG a 12 -34.964 -1.448 84.022 1.00 0.39 \ ATOM 114 CZ ARG a 12 -35.435 -2.592 83.528 1.00 0.39 \ ATOM 115 NH1 ARG a 12 -35.672 -2.680 82.225 1.00 0.39 \ ATOM 116 NH2 ARG a 12 -35.688 -3.633 84.315 1.00 0.39 \ ATOM 117 N LEU a 13 -35.019 4.528 81.327 1.00 0.39 \ ATOM 118 CA LEU a 13 -34.926 5.379 80.157 1.00 0.39 \ ATOM 119 C LEU a 13 -34.558 6.805 80.501 1.00 0.39 \ ATOM 120 O LEU a 13 -33.803 7.413 79.790 1.00 0.39 \ ATOM 121 CB LEU a 13 -36.256 5.354 79.408 1.00 0.39 \ ATOM 122 CG LEU a 13 -36.380 5.714 77.925 1.00 0.39 \ ATOM 123 CD1 LEU a 13 -37.411 6.783 77.793 1.00 0.39 \ ATOM 124 CD2 LEU a 13 -35.084 6.155 77.271 1.00 0.39 \ ATOM 125 N LYS a 14 -35.089 7.324 81.601 1.00 0.39 \ ATOM 126 CA LYS a 14 -34.794 8.686 82.042 1.00 0.39 \ ATOM 127 C LYS a 14 -33.392 8.785 82.628 1.00 0.39 \ ATOM 128 O LYS a 14 -32.708 9.792 82.473 1.00 0.39 \ ATOM 129 CB LYS a 14 -35.817 9.147 83.081 1.00 0.39 \ ATOM 130 CG LYS a 14 -36.945 10.002 82.523 1.00 0.39 \ ATOM 131 CD LYS a 14 -37.874 10.522 83.631 1.00 0.39 \ ATOM 132 CE LYS a 14 -38.595 9.365 84.288 1.00 0.39 \ ATOM 133 NZ LYS a 14 -39.196 9.703 85.619 1.00 0.39 \ ATOM 134 N ARG a 15 -32.973 7.724 83.308 1.00 0.39 \ ATOM 135 CA ARG a 15 -31.689 7.688 83.979 1.00 0.39 \ ATOM 136 C ARG a 15 -30.552 7.593 82.961 1.00 0.39 \ ATOM 137 O ARG a 15 -29.412 7.978 83.261 1.00 0.39 \ ATOM 138 CB ARG a 15 -31.660 6.522 84.973 1.00 0.39 \ ATOM 139 CG ARG a 15 -30.313 6.282 85.643 1.00 0.39 \ ATOM 140 CD ARG a 15 -30.391 5.260 86.781 1.00 0.39 \ ATOM 141 NE ARG a 15 -31.412 4.262 86.505 1.00 0.39 \ ATOM 142 CZ ARG a 15 -32.028 3.552 87.446 1.00 0.39 \ ATOM 143 NH1 ARG a 15 -31.709 3.736 88.732 1.00 0.39 \ ATOM 144 NH2 ARG a 15 -32.966 2.656 87.102 1.00 0.39 \ ATOM 145 N LYS a 16 -30.868 7.118 81.751 1.00 0.39 \ ATOM 146 CA LYS a 16 -29.867 6.977 80.689 1.00 0.39 \ ATOM 147 C LYS a 16 -29.651 8.280 79.930 1.00 0.39 \ ATOM 148 O LYS a 16 -28.504 8.655 79.618 1.00 0.39 \ ATOM 149 CB LYS a 16 -30.249 5.858 79.718 1.00 0.39 \ ATOM 150 CG LYS a 16 -29.313 4.646 79.872 1.00 0.39 \ ATOM 151 CD LYS a 16 -29.308 3.677 78.673 1.00 0.39 \ ATOM 152 CE LYS a 16 -27.869 3.406 78.206 1.00 0.39 \ ATOM 153 NZ LYS a 16 -27.182 4.659 77.698 1.00 0.39 \ ATOM 154 N ARG a 17 -30.755 8.974 79.654 1.00 0.39 \ ATOM 155 CA ARG a 17 -30.694 10.321 79.086 1.00 0.39 \ ATOM 156 C ARG a 17 -30.161 11.209 80.189 1.00 0.39 \ ATOM 157 O ARG a 17 -29.593 12.243 79.931 1.00 0.39 \ ATOM 158 CB ARG a 17 -32.071 10.801 78.564 1.00 0.39 \ ATOM 159 CG ARG a 17 -33.036 9.645 78.257 1.00 0.39 \ ATOM 160 CD ARG a 17 -34.005 9.790 77.089 1.00 0.39 \ ATOM 161 NE ARG a 17 -35.339 10.157 77.559 1.00 0.39 \ ATOM 162 CZ ARG a 17 -36.493 9.883 76.951 1.00 0.39 \ ATOM 163 NH1 ARG a 17 -36.549 9.187 75.820 1.00 0.39 \ ATOM 164 NH2 ARG a 17 -37.611 10.306 77.506 1.00 0.39 \ ATOM 165 N ARG a 18 -30.330 10.794 81.435 1.00 0.39 \ ATOM 166 CA ARG a 18 -29.657 11.502 82.502 1.00 0.39 \ ATOM 167 C ARG a 18 -28.175 11.299 82.299 1.00 0.39 \ ATOM 168 O ARG a 18 -27.430 12.281 82.291 1.00 0.39 \ ATOM 169 CB ARG a 18 -30.078 11.030 83.887 1.00 0.39 \ ATOM 170 CG ARG a 18 -29.708 12.022 84.993 1.00 0.39 \ ATOM 171 CD ARG a 18 -30.505 11.747 86.241 1.00 0.39 \ ATOM 172 NE ARG a 18 -31.905 11.485 85.892 1.00 0.39 \ ATOM 173 CZ ARG a 18 -32.741 10.765 86.647 1.00 0.39 \ ATOM 174 NH1 ARG a 18 -32.318 10.230 87.805 1.00 0.39 \ ATOM 175 NH2 ARG a 18 -34.002 10.568 86.250 1.00 0.39 \ ATOM 176 N LYS a 19 -27.749 10.046 82.097 1.00 0.39 \ ATOM 177 CA LYS a 19 -26.328 9.756 81.873 1.00 0.39 \ ATOM 178 C LYS a 19 -25.831 10.518 80.652 1.00 0.39 \ ATOM 179 O LYS a 19 -24.905 11.329 80.741 1.00 0.39 \ ATOM 180 CB LYS a 19 -26.071 8.248 81.700 1.00 0.39 \ ATOM 181 CG LYS a 19 -25.272 7.571 82.826 1.00 0.39 \ ATOM 182 CD LYS a 19 -26.208 7.146 83.994 1.00 0.39 \ ATOM 183 CE LYS a 19 -25.476 6.911 85.362 1.00 0.39 \ ATOM 184 NZ LYS a 19 -24.554 5.702 85.501 1.00 0.39 \ ATOM 185 N VAL a 20 -26.484 10.281 79.523 1.00 -2.46 \ ATOM 186 CA VAL a 20 -25.965 10.778 78.255 1.00 -2.46 \ ATOM 187 C VAL a 20 -25.858 12.303 78.228 1.00 -2.46 \ ATOM 188 O VAL a 20 -24.929 12.850 77.661 1.00 -2.46 \ ATOM 189 CB VAL a 20 -26.824 10.269 77.068 1.00 -2.46 \ ATOM 190 CG1 VAL a 20 -26.824 11.247 75.915 1.00 -2.46 \ ATOM 191 CG2 VAL a 20 -26.311 8.914 76.601 1.00 -2.46 \ ATOM 192 N ARG a 21 -26.783 12.991 78.873 1.00 0.39 \ ATOM 193 CA ARG a 21 -26.737 14.435 78.848 1.00 0.39 \ ATOM 194 C ARG a 21 -25.549 14.920 79.648 1.00 0.39 \ ATOM 195 O ARG a 21 -24.885 15.883 79.243 1.00 0.39 \ ATOM 196 CB ARG a 21 -28.027 15.043 79.378 1.00 0.39 \ ATOM 197 CG ARG a 21 -28.834 15.724 78.315 1.00 0.39 \ ATOM 198 CD ARG a 21 -30.053 16.417 78.885 1.00 0.39 \ ATOM 199 NE ARG a 21 -29.934 17.854 78.726 1.00 0.39 \ ATOM 200 CZ ARG a 21 -30.677 18.757 79.351 1.00 0.39 \ ATOM 201 NH1 ARG a 21 -30.472 20.040 79.128 1.00 0.39 \ ATOM 202 NH2 ARG a 21 -31.621 18.396 80.195 1.00 0.39 \ ATOM 203 N ALA a 22 -25.261 14.250 80.764 1.00 -2.46 \ ATOM 204 CA ALA a 22 -24.160 14.692 81.623 1.00 -2.46 \ ATOM 205 C ALA a 22 -22.824 14.800 80.860 1.00 -2.46 \ ATOM 206 O ALA a 22 -22.036 15.699 81.129 1.00 -2.46 \ ATOM 207 CB ALA a 22 -24.018 13.772 82.802 1.00 -2.46 \ ATOM 208 N ARG a 23 -22.608 13.890 79.903 1.00 0.39 \ ATOM 209 CA ARG a 23 -21.432 13.844 79.037 1.00 0.39 \ ATOM 210 C ARG a 23 -21.014 15.187 78.481 1.00 0.39 \ ATOM 211 O ARG a 23 -19.845 15.411 78.166 1.00 0.39 \ ATOM 212 CB ARG a 23 -21.692 12.937 77.850 1.00 0.39 \ ATOM 213 CG ARG a 23 -21.506 11.469 78.045 1.00 0.39 \ ATOM 214 CD ARG a 23 -21.657 10.805 76.701 1.00 0.39 \ ATOM 215 NE ARG a 23 -20.835 9.616 76.591 1.00 0.39 \ ATOM 216 CZ ARG a 23 -19.637 9.576 76.002 1.00 0.39 \ ATOM 217 NH1 ARG a 23 -18.960 8.439 75.956 1.00 0.39 \ ATOM 218 NH2 ARG a 23 -19.098 10.663 75.464 1.00 0.39 \ ATOM 219 N SER a 24 -21.982 16.078 78.327 1.00 -1.00 \ ATOM 220 CA SER a 24 -21.722 17.373 77.717 1.00 -1.00 \ ATOM 221 C SER a 24 -22.137 18.552 78.591 1.00 -1.00 \ ATOM 222 O SER a 24 -22.404 19.627 78.066 1.00 -1.00 \ ATOM 223 CB SER a 24 -22.448 17.459 76.373 1.00 -1.00 \ ATOM 224 OG SER a 24 -23.848 17.340 76.561 1.00 -1.00 \ ATOM 225 N LYS a 25 -22.201 18.341 79.905 1.00 -1.00 \ ATOM 226 CA LYS a 25 -22.795 19.304 80.846 1.00 -1.00 \ ATOM 227 C LYS a 25 -22.412 20.773 80.635 1.00 -1.00 \ ATOM 228 O LYS a 25 -21.301 21.081 80.220 1.00 -1.00 \ ATOM 229 CB LYS a 25 -22.435 18.914 82.282 1.00 -1.00 \ ATOM 230 CG LYS a 25 -23.593 18.263 83.039 1.00 -1.00 \ ATOM 231 CD LYS a 25 -23.354 18.235 84.558 1.00 -1.00 \ ATOM 232 CE LYS a 25 -22.140 17.393 84.912 1.00 -1.00 \ ATOM 233 NZ LYS a 25 -21.700 17.603 86.325 1.00 -1.00 \ """, "e4ul6a1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e4ul6a1_csv", state=0, origin=1) cmd.zoom("e4ul6a1_csv", animate=-1)