cmd.read_pdbstr("""\ ATOM 1 N MET a 1 -48.051 -3.538 78.502 1.00 -1.00 \ ATOM 2 CA MET a 1 -47.288 -4.110 79.599 1.00 -1.00 \ ATOM 3 C MET a 1 -47.875 -3.647 80.937 1.00 -1.00 \ ATOM 4 O MET a 1 -48.524 -2.597 80.999 1.00 -1.00 \ ATOM 5 CB MET a 1 -45.801 -3.738 79.465 1.00 -1.00 \ ATOM 6 CG MET a 1 -45.464 -2.264 79.583 1.00 -1.00 \ ATOM 7 SD MET a 1 -43.722 -1.899 79.123 1.00 -1.00 \ ATOM 8 CE MET a 1 -42.922 -3.298 79.937 1.00 -1.00 \ ATOM 9 N ARG a 2 -47.673 -4.452 81.983 1.00 0.39 \ ATOM 10 CA ARG a 2 -48.065 -4.109 83.339 1.00 0.39 \ ATOM 11 C ARG a 2 -47.768 -2.655 83.519 1.00 0.39 \ ATOM 12 O ARG a 2 -46.779 -2.178 83.017 1.00 0.39 \ ATOM 13 CB ARG a 2 -47.309 -4.968 84.359 1.00 0.39 \ ATOM 14 CG ARG a 2 -47.349 -4.464 85.816 1.00 0.39 \ ATOM 15 CD ARG a 2 -48.157 -5.342 86.794 1.00 0.39 \ ATOM 16 NE ARG a 2 -47.333 -6.217 87.642 1.00 0.39 \ ATOM 17 CZ ARG a 2 -47.380 -6.248 88.973 1.00 0.39 \ ATOM 18 NH1 ARG a 2 -48.199 -5.441 89.627 1.00 0.39 \ ATOM 19 NH2 ARG a 2 -46.610 -7.089 89.648 1.00 0.39 \ ATOM 20 N ALA a 3 -48.653 -1.926 84.167 1.00 0.39 \ ATOM 21 CA ALA a 3 -48.484 -0.500 84.317 1.00 0.39 \ ATOM 22 C ALA a 3 -47.144 -0.197 84.949 1.00 0.39 \ ATOM 23 O ALA a 3 -46.420 0.688 84.478 1.00 0.39 \ ATOM 24 CB ALA a 3 -49.618 0.086 85.141 1.00 0.39 \ ATOM 25 N LYS a 4 -46.782 -0.952 85.985 1.00 0.39 \ ATOM 26 CA LYS a 4 -45.624 -0.591 86.808 1.00 0.39 \ ATOM 27 C LYS a 4 -44.300 -0.953 86.142 1.00 0.39 \ ATOM 28 O LYS a 4 -43.299 -0.280 86.330 1.00 0.39 \ ATOM 29 CB LYS a 4 -45.713 -1.237 88.198 1.00 0.39 \ ATOM 30 CG LYS a 4 -45.401 -2.695 88.265 1.00 0.39 \ ATOM 31 CD LYS a 4 -44.799 -3.022 89.610 1.00 0.39 \ ATOM 32 CE LYS a 4 -45.640 -2.466 90.752 1.00 0.39 \ ATOM 33 NZ LYS a 4 -45.147 -2.768 92.156 1.00 0.39 \ ATOM 34 N TRP a 5 -44.293 -2.004 85.345 1.00 0.39 \ ATOM 35 CA TRP a 5 -43.095 -2.367 84.629 1.00 0.39 \ ATOM 36 C TRP a 5 -42.829 -1.327 83.556 1.00 0.39 \ ATOM 37 O TRP a 5 -41.710 -1.208 83.049 1.00 0.39 \ ATOM 38 CB TRP a 5 -43.216 -3.761 84.017 1.00 0.39 \ ATOM 39 CG TRP a 5 -43.384 -4.929 84.989 1.00 0.39 \ ATOM 40 CD1 TRP a 5 -43.952 -6.127 84.695 1.00 0.39 \ ATOM 41 CD2 TRP a 5 -42.978 -5.016 86.374 1.00 0.39 \ ATOM 42 NE1 TRP a 5 -43.932 -6.953 85.794 1.00 0.39 \ ATOM 43 CE2 TRP a 5 -43.340 -6.293 86.836 1.00 0.39 \ ATOM 44 CE3 TRP a 5 -42.368 -4.139 87.265 1.00 0.39 \ ATOM 45 CZ2 TRP a 5 -43.112 -6.714 88.151 1.00 0.39 \ ATOM 46 CZ3 TRP a 5 -42.128 -4.571 88.564 1.00 0.39 \ ATOM 47 CH2 TRP a 5 -42.525 -5.838 88.998 1.00 0.39 \ ATOM 48 N ARG a 6 -43.857 -0.564 83.220 1.00 0.39 \ ATOM 49 CA ARG a 6 -43.699 0.527 82.283 1.00 0.39 \ ATOM 50 C ARG a 6 -43.277 1.805 83.008 1.00 0.39 \ ATOM 51 O ARG a 6 -42.519 2.629 82.488 1.00 0.39 \ ATOM 52 CB ARG a 6 -44.993 0.749 81.513 1.00 0.39 \ ATOM 53 CG ARG a 6 -44.951 1.954 80.638 1.00 0.39 \ ATOM 54 CD ARG a 6 -45.809 1.738 79.453 1.00 0.39 \ ATOM 55 NE ARG a 6 -46.550 2.947 79.107 1.00 0.39 \ ATOM 56 CZ ARG a 6 -45.992 4.035 78.571 1.00 0.39 \ ATOM 57 NH1 ARG a 6 -44.663 4.066 78.325 1.00 0.39 \ ATOM 58 NH2 ARG a 6 -46.769 5.096 78.294 1.00 0.39 \ ATOM 59 N LYS a 7 -43.791 1.984 84.212 1.00 0.39 \ ATOM 60 CA LYS a 7 -43.255 3.008 85.078 1.00 0.39 \ ATOM 61 C LYS a 7 -41.749 2.770 85.248 1.00 0.39 \ ATOM 62 O LYS a 7 -40.964 3.701 85.213 1.00 0.39 \ ATOM 63 CB LYS a 7 -43.978 2.977 86.419 1.00 0.39 \ ATOM 64 CG LYS a 7 -43.630 4.084 87.372 1.00 0.39 \ ATOM 65 CD LYS a 7 -44.056 3.658 88.738 1.00 0.39 \ ATOM 66 CE LYS a 7 -44.477 4.833 89.533 1.00 0.39 \ ATOM 67 NZ LYS a 7 -45.638 5.441 88.860 1.00 0.39 \ ATOM 68 N LYS a 8 -41.355 1.508 85.407 1.00 0.39 \ ATOM 69 CA LYS a 8 -39.945 1.159 85.551 1.00 0.39 \ ATOM 70 C LYS a 8 -39.161 1.254 84.234 1.00 0.39 \ ATOM 71 O LYS a 8 -37.978 1.600 84.239 1.00 0.39 \ ATOM 72 CB LYS a 8 -39.791 -0.243 86.119 1.00 0.39 \ ATOM 73 CG LYS a 8 -38.365 -0.590 86.434 1.00 0.39 \ ATOM 74 CD LYS a 8 -38.177 -2.057 86.308 1.00 0.39 \ ATOM 75 CE LYS a 8 -38.660 -2.759 87.522 1.00 0.39 \ ATOM 76 NZ LYS a 8 -37.592 -2.945 88.552 1.00 0.39 \ ATOM 77 N ARG a 9 -39.814 0.919 83.120 1.00 0.39 \ ATOM 78 CA ARG a 9 -39.283 1.222 81.799 1.00 0.39 \ ATOM 79 C ARG a 9 -38.765 2.630 81.755 1.00 0.39 \ ATOM 80 O ARG a 9 -37.593 2.844 81.513 1.00 0.39 \ ATOM 81 CB ARG a 9 -40.341 1.059 80.720 1.00 0.39 \ ATOM 82 CG ARG a 9 -40.249 -0.224 79.958 1.00 0.39 \ ATOM 83 CD ARG a 9 -39.491 0.003 78.702 1.00 0.39 \ ATOM 84 NE ARG a 9 -40.317 -0.143 77.507 1.00 0.39 \ ATOM 85 CZ ARG a 9 -40.675 -1.299 76.955 1.00 0.39 \ ATOM 86 NH1 ARG a 9 -40.325 -2.458 77.490 1.00 0.39 \ ATOM 87 NH2 ARG a 9 -41.389 -1.287 75.852 1.00 0.39 \ ATOM 88 N THR a 10 -39.626 3.603 82.001 1.00 -2.46 \ ATOM 89 CA THR a 10 -39.218 4.955 81.708 1.00 -2.46 \ ATOM 90 C THR a 10 -38.446 5.591 82.869 1.00 -2.46 \ ATOM 91 O THR a 10 -37.860 6.658 82.715 1.00 -2.46 \ ATOM 92 CB THR a 10 -40.417 5.803 81.294 1.00 -2.46 \ ATOM 93 OG1 THR a 10 -40.995 6.435 82.435 1.00 -2.46 \ ATOM 94 CG2 THR a 10 -41.456 4.933 80.575 1.00 -2.46 \ ATOM 95 N ARG a 11 -38.396 4.927 84.020 1.00 0.39 \ ATOM 96 CA ARG a 11 -37.462 5.369 85.048 1.00 0.39 \ ATOM 97 C ARG a 11 -36.022 5.185 84.532 1.00 0.39 \ ATOM 98 O ARG a 11 -35.171 6.086 84.600 1.00 0.39 \ ATOM 99 CB ARG a 11 -37.672 4.596 86.340 1.00 0.39 \ ATOM 100 CG ARG a 11 -38.137 5.453 87.522 1.00 0.39 \ ATOM 101 CD ARG a 11 -39.637 5.462 87.668 1.00 0.39 \ ATOM 102 NE ARG a 11 -40.090 6.419 88.675 1.00 0.39 \ ATOM 103 CZ ARG a 11 -40.695 6.095 89.822 1.00 0.39 \ ATOM 104 NH1 ARG a 11 -40.908 4.831 90.127 1.00 0.39 \ ATOM 105 NH2 ARG a 11 -41.081 7.035 90.670 1.00 0.39 \ ATOM 106 N ARG a 12 -35.777 3.990 84.000 1.00 0.39 \ ATOM 107 CA ARG a 12 -34.517 3.637 83.403 1.00 0.39 \ ATOM 108 C ARG a 12 -34.238 4.595 82.287 1.00 0.39 \ ATOM 109 O ARG a 12 -33.163 5.138 82.172 1.00 0.39 \ ATOM 110 CB ARG a 12 -34.566 2.219 82.865 1.00 0.39 \ ATOM 111 CG ARG a 12 -34.818 1.172 83.864 1.00 0.39 \ ATOM 112 CD ARG a 12 -34.933 -0.151 83.193 1.00 0.39 \ ATOM 113 NE ARG a 12 -35.095 -1.206 84.182 1.00 0.39 \ ATOM 114 CZ ARG a 12 -35.428 -2.457 83.891 1.00 0.39 \ ATOM 115 NH1 ARG a 12 -35.642 -2.806 82.633 1.00 0.39 \ ATOM 116 NH2 ARG a 12 -35.555 -3.354 84.855 1.00 0.39 \ ATOM 117 N LEU a 13 -35.252 4.790 81.464 1.00 0.39 \ ATOM 118 CA LEU a 13 -35.137 5.569 80.254 1.00 0.39 \ ATOM 119 C LEU a 13 -34.605 6.948 80.574 1.00 0.39 \ ATOM 120 O LEU a 13 -33.824 7.504 79.820 1.00 0.39 \ ATOM 121 CB LEU a 13 -36.504 5.647 79.562 1.00 0.39 \ ATOM 122 CG LEU a 13 -36.675 6.066 78.097 1.00 0.39 \ ATOM 123 CD1 LEU a 13 -36.178 7.450 77.882 1.00 0.39 \ ATOM 124 CD2 LEU a 13 -35.996 5.095 77.109 1.00 0.39 \ ATOM 125 N LYS a 14 -35.041 7.487 81.702 1.00 0.39 \ ATOM 126 CA LYS a 14 -34.677 8.834 82.071 1.00 0.39 \ ATOM 127 C LYS a 14 -33.248 8.849 82.608 1.00 0.39 \ ATOM 128 O LYS a 14 -32.477 9.777 82.318 1.00 0.39 \ ATOM 129 CB LYS a 14 -35.653 9.406 83.108 1.00 0.39 \ ATOM 130 CG LYS a 14 -37.057 9.610 82.595 1.00 0.39 \ ATOM 131 CD LYS a 14 -37.770 10.824 83.212 1.00 0.39 \ ATOM 132 CE LYS a 14 -38.138 10.622 84.653 1.00 0.39 \ ATOM 133 NZ LYS a 14 -38.881 9.349 84.779 1.00 0.39 \ ATOM 134 N ARG a 15 -32.895 7.828 83.389 1.00 0.39 \ ATOM 135 CA ARG a 15 -31.566 7.772 83.983 1.00 0.39 \ ATOM 136 C ARG a 15 -30.523 7.849 82.896 1.00 0.39 \ ATOM 137 O ARG a 15 -29.506 8.539 83.057 1.00 0.39 \ ATOM 138 CB ARG a 15 -31.372 6.502 84.781 1.00 0.39 \ ATOM 139 CG ARG a 15 -31.278 6.690 86.279 1.00 0.39 \ ATOM 140 CD ARG a 15 -30.480 5.511 86.836 1.00 0.39 \ ATOM 141 NE ARG a 15 -30.974 4.265 86.254 1.00 0.39 \ ATOM 142 CZ ARG a 15 -31.889 3.488 86.833 1.00 0.39 \ ATOM 143 NH1 ARG a 15 -32.384 3.809 88.039 1.00 0.39 \ ATOM 144 NH2 ARG a 15 -32.286 2.375 86.217 1.00 0.39 \ ATOM 145 N LYS a 16 -30.804 7.162 81.784 1.00 0.39 \ ATOM 146 CA LYS a 16 -29.934 7.110 80.619 1.00 0.39 \ ATOM 147 C LYS a 16 -29.809 8.455 79.928 1.00 0.39 \ ATOM 148 O LYS a 16 -28.704 8.895 79.590 1.00 0.39 \ ATOM 149 CB LYS a 16 -30.448 6.082 79.626 1.00 0.39 \ ATOM 150 CG LYS a 16 -29.413 5.028 79.244 1.00 0.39 \ ATOM 151 CD LYS a 16 -29.302 4.891 77.722 1.00 0.39 \ ATOM 152 CE LYS a 16 -27.841 4.766 77.296 1.00 0.39 \ ATOM 153 NZ LYS a 16 -27.062 5.916 77.831 1.00 0.39 \ ATOM 154 N ARG a 17 -30.938 9.114 79.708 1.00 0.39 \ ATOM 155 CA ARG a 17 -30.893 10.435 79.095 1.00 0.39 \ ATOM 156 C ARG a 17 -30.225 11.345 80.112 1.00 0.39 \ ATOM 157 O ARG a 17 -29.395 12.143 79.754 1.00 0.39 \ ATOM 158 CB ARG a 17 -32.308 10.922 78.667 1.00 0.39 \ ATOM 159 CG ARG a 17 -33.165 9.794 78.002 1.00 0.39 \ ATOM 160 CD ARG a 17 -34.191 10.185 76.944 1.00 0.39 \ ATOM 161 NE ARG a 17 -35.463 10.583 77.545 1.00 0.39 \ ATOM 162 CZ ARG a 17 -36.685 10.405 77.036 1.00 0.39 \ ATOM 163 NH1 ARG a 17 -36.905 9.768 75.885 1.00 0.39 \ ATOM 164 NH2 ARG a 17 -37.710 10.855 77.726 1.00 0.39 \ ATOM 165 N ARG a 18 -30.547 11.161 81.390 1.00 0.39 \ ATOM 166 CA ARG a 18 -29.941 11.934 82.475 1.00 0.39 \ ATOM 167 C ARG a 18 -28.432 11.797 82.393 1.00 0.39 \ ATOM 168 O ARG a 18 -27.715 12.787 82.546 1.00 0.39 \ ATOM 169 CB ARG a 18 -30.466 11.478 83.855 1.00 0.39 \ ATOM 170 CG ARG a 18 -30.266 12.473 85.036 1.00 0.39 \ ATOM 171 CD ARG a 18 -30.715 11.875 86.381 1.00 0.39 \ ATOM 172 NE ARG a 18 -32.038 11.229 86.254 1.00 0.39 \ ATOM 173 CZ ARG a 18 -32.490 10.239 87.043 1.00 0.39 \ ATOM 174 NH1 ARG a 18 -31.712 9.793 88.037 1.00 0.39 \ ATOM 175 NH2 ARG a 18 -33.713 9.690 86.849 1.00 0.39 \ ATOM 176 N LYS a 19 -27.959 10.580 82.119 1.00 0.39 \ ATOM 177 CA LYS a 19 -26.526 10.334 81.911 1.00 0.39 \ ATOM 178 C LYS a 19 -25.997 11.021 80.635 1.00 0.39 \ ATOM 179 O LYS a 19 -25.149 11.895 80.686 1.00 0.39 \ ATOM 180 CB LYS a 19 -26.236 8.825 81.870 1.00 0.39 \ ATOM 181 CG LYS a 19 -25.361 8.322 83.025 1.00 0.39 \ ATOM 182 CD LYS a 19 -26.115 7.319 83.968 1.00 0.39 \ ATOM 183 CE LYS a 19 -25.387 7.095 85.366 1.00 0.39 \ ATOM 184 NZ LYS a 19 -24.943 5.663 85.727 1.00 0.39 \ ATOM 185 N VAL a 20 -26.535 10.643 79.493 1.00 -2.46 \ ATOM 186 CA VAL a 20 -26.049 11.136 78.217 1.00 -2.46 \ ATOM 187 C VAL a 20 -25.982 12.654 78.150 1.00 -2.46 \ ATOM 188 O VAL a 20 -25.221 13.218 77.386 1.00 -2.46 \ ATOM 189 CB VAL a 20 -26.943 10.589 77.089 1.00 -2.46 \ ATOM 190 CG1 VAL a 20 -26.466 11.028 75.712 1.00 -2.46 \ ATOM 191 CG2 VAL a 20 -26.951 9.072 77.153 1.00 -2.46 \ ATOM 192 N ARG a 21 -26.767 13.340 78.957 1.00 0.39 \ ATOM 193 CA ARG a 21 -26.746 14.785 78.870 1.00 0.39 \ ATOM 194 C ARG a 21 -25.558 15.300 79.667 1.00 0.39 \ ATOM 195 O ARG a 21 -24.796 16.132 79.174 1.00 0.39 \ ATOM 196 CB ARG a 21 -28.056 15.393 79.355 1.00 0.39 \ ATOM 197 CG ARG a 21 -28.799 16.175 78.294 1.00 0.39 \ ATOM 198 CD ARG a 21 -30.043 16.881 78.850 1.00 0.39 \ ATOM 199 NE ARG a 21 -29.973 18.331 78.696 1.00 0.39 \ ATOM 200 CZ ARG a 21 -30.765 19.188 79.323 1.00 0.39 \ ATOM 201 NH1 ARG a 21 -30.620 20.486 79.140 1.00 0.39 \ ATOM 202 NH2 ARG a 21 -31.692 18.748 80.139 1.00 0.39 \ ATOM 203 N ALA a 22 -25.384 14.785 80.878 1.00 -2.46 \ ATOM 204 CA ALA a 22 -24.229 15.136 81.700 1.00 -2.46 \ ATOM 205 C ALA a 22 -22.941 15.148 80.895 1.00 -2.46 \ ATOM 206 O ALA a 22 -22.177 16.094 80.977 1.00 -2.46 \ ATOM 207 CB ALA a 22 -24.100 14.194 82.839 1.00 -2.46 \ ATOM 208 N ARG a 23 -22.727 14.096 80.106 1.00 0.39 \ ATOM 209 CA ARG a 23 -21.686 13.977 79.073 1.00 0.39 \ ATOM 210 C ARG a 23 -21.241 15.237 78.355 1.00 0.39 \ ATOM 211 O ARG a 23 -20.326 15.208 77.550 1.00 0.39 \ ATOM 212 CB ARG a 23 -22.192 13.041 77.986 1.00 0.39 \ ATOM 213 CG ARG a 23 -21.691 11.671 77.981 1.00 0.39 \ ATOM 214 CD ARG a 23 -21.591 11.236 76.566 1.00 0.39 \ ATOM 215 NE ARG a 23 -20.838 10.007 76.502 1.00 0.39 \ ATOM 216 CZ ARG a 23 -19.622 9.888 75.968 1.00 0.39 \ ATOM 217 NH1 ARG a 23 -19.024 8.708 76.003 1.00 0.39 \ ATOM 218 NH2 ARG a 23 -18.995 10.920 75.401 1.00 0.39 \ ATOM 219 N SER a 24 -21.927 16.335 78.589 1.00 -1.00 \ ATOM 220 CA SER a 24 -21.820 17.469 77.709 1.00 -1.00 \ ATOM 221 C SER a 24 -22.121 18.789 78.433 1.00 -1.00 \ ATOM 222 O SER a 24 -22.126 19.858 77.816 1.00 -1.00 \ ATOM 223 CB SER a 24 -22.767 17.257 76.533 1.00 -1.00 \ ATOM 224 OG SER a 24 -23.411 18.461 76.177 1.00 -1.00 \ ATOM 225 N LYS a 25 -22.373 18.708 79.737 1.00 -1.00 \ ATOM 226 CA LYS a 25 -22.584 19.898 80.539 1.00 -1.00 \ ATOM 227 C LYS a 25 -21.510 20.956 80.300 1.00 -1.00 \ ATOM 228 O LYS a 25 -21.789 22.153 80.404 1.00 -1.00 \ ATOM 229 CB LYS a 25 -22.616 19.552 82.015 1.00 -1.00 \ ATOM 230 CG LYS a 25 -23.645 18.552 82.375 1.00 -1.00 \ ATOM 231 CD LYS a 25 -23.703 18.385 83.903 1.00 -1.00 \ ATOM 232 CE LYS a 25 -22.301 18.422 84.549 1.00 -1.00 \ ATOM 233 NZ LYS a 25 -22.375 18.062 86.001 1.00 -1.00 \ """, "e4ulba1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e4ulba1_csv", state=0, origin=1) cmd.zoom("e4ulba1_csv", animate=-1)