cmd.read_pdbstr("""\ ATOM 1 N MET a 1 -48.277 -4.200 78.271 1.00 -1.00 \ ATOM 2 CA MET a 1 -47.268 -4.490 79.293 1.00 -1.00 \ ATOM 3 C MET a 1 -47.606 -3.855 80.629 1.00 -1.00 \ ATOM 4 O MET a 1 -47.963 -2.681 80.688 1.00 -1.00 \ ATOM 5 CB MET a 1 -45.884 -4.025 78.841 1.00 -1.00 \ ATOM 6 CG MET a 1 -45.663 -2.521 78.701 1.00 -1.00 \ ATOM 7 SD MET a 1 -43.890 -2.213 78.509 1.00 -1.00 \ ATOM 8 CE MET a 1 -43.312 -3.145 79.916 1.00 -1.00 \ ATOM 9 N ARG a 2 -47.479 -4.648 81.687 1.00 0.39 \ ATOM 10 CA ARG a 2 -47.910 -4.269 83.026 1.00 0.39 \ ATOM 11 C ARG a 2 -47.545 -2.839 83.280 1.00 0.39 \ ATOM 12 O ARG a 2 -46.459 -2.419 82.944 1.00 0.39 \ ATOM 13 CB ARG a 2 -47.290 -5.188 84.087 1.00 0.39 \ ATOM 14 CG ARG a 2 -47.420 -4.686 85.515 1.00 0.39 \ ATOM 15 CD ARG a 2 -48.131 -5.669 86.434 1.00 0.39 \ ATOM 16 NE ARG a 2 -47.273 -6.575 87.215 1.00 0.39 \ ATOM 17 CZ ARG a 2 -47.256 -6.640 88.553 1.00 0.39 \ ATOM 18 NH1 ARG a 2 -48.018 -5.835 89.277 1.00 0.39 \ ATOM 19 NH2 ARG a 2 -46.471 -7.501 89.181 1.00 0.39 \ ATOM 20 N ALA a 3 -48.480 -2.071 83.812 1.00 0.39 \ ATOM 21 CA ALA a 3 -48.283 -0.638 84.002 1.00 0.39 \ ATOM 22 C ALA a 3 -46.967 -0.329 84.744 1.00 0.39 \ ATOM 23 O ALA a 3 -46.164 0.504 84.312 1.00 0.39 \ ATOM 24 CB ALA a 3 -49.479 -0.055 84.743 1.00 0.39 \ ATOM 25 N LYS a 4 -46.786 -1.017 85.865 1.00 0.39 \ ATOM 26 CA LYS a 4 -45.518 -1.160 86.564 1.00 0.39 \ ATOM 27 C LYS a 4 -44.296 -1.180 85.632 1.00 0.39 \ ATOM 28 O LYS a 4 -43.510 -0.254 85.593 1.00 0.39 \ ATOM 29 CB LYS a 4 -45.579 -2.454 87.375 1.00 0.39 \ ATOM 30 CG LYS a 4 -44.547 -2.588 88.393 1.00 0.39 \ ATOM 31 CD LYS a 4 -45.073 -2.191 89.717 1.00 0.39 \ ATOM 32 CE LYS a 4 -45.694 -3.359 90.418 1.00 0.39 \ ATOM 33 NZ LYS a 4 -45.246 -3.344 91.834 1.00 0.39 \ ATOM 34 N TRP a 5 -44.155 -2.240 84.858 1.00 0.39 \ ATOM 35 CA TRP a 5 -42.964 -2.424 84.050 1.00 0.39 \ ATOM 36 C TRP a 5 -42.781 -1.362 82.967 1.00 0.39 \ ATOM 37 O TRP a 5 -41.654 -1.159 82.499 1.00 0.39 \ ATOM 38 CB TRP a 5 -42.969 -3.811 83.404 1.00 0.39 \ ATOM 39 CG TRP a 5 -43.332 -4.971 84.306 1.00 0.39 \ ATOM 40 CD1 TRP a 5 -44.002 -6.100 83.932 1.00 0.39 \ ATOM 41 CD2 TRP a 5 -43.039 -5.129 85.714 1.00 0.39 \ ATOM 42 NE1 TRP a 5 -44.144 -6.945 85.007 1.00 0.39 \ ATOM 43 CE2 TRP a 5 -43.560 -6.371 86.110 1.00 0.39 \ ATOM 44 CE3 TRP a 5 -42.385 -4.349 86.667 1.00 0.39 \ ATOM 45 CZ2 TRP a 5 -43.449 -6.843 87.421 1.00 0.39 \ ATOM 46 CZ3 TRP a 5 -42.276 -4.827 87.956 1.00 0.39 \ ATOM 47 CH2 TRP a 5 -42.810 -6.051 88.323 1.00 0.39 \ ATOM 48 N ARG a 6 -43.859 -0.694 82.556 1.00 0.39 \ ATOM 49 CA ARG a 6 -43.714 0.397 81.592 1.00 0.39 \ ATOM 50 C ARG a 6 -43.208 1.642 82.324 1.00 0.39 \ ATOM 51 O ARG a 6 -42.545 2.515 81.749 1.00 0.39 \ ATOM 52 CB ARG a 6 -45.026 0.690 80.875 1.00 0.39 \ ATOM 53 CG ARG a 6 -45.091 2.084 80.256 1.00 0.39 \ ATOM 54 CD ARG a 6 -45.665 2.077 78.849 1.00 0.39 \ ATOM 55 NE ARG a 6 -46.618 3.174 78.606 1.00 0.39 \ ATOM 56 CZ ARG a 6 -46.299 4.410 78.176 1.00 0.39 \ ATOM 57 NH1 ARG a 6 -45.018 4.769 77.926 1.00 0.39 \ ATOM 58 NH2 ARG a 6 -47.277 5.309 77.996 1.00 0.39 \ ATOM 59 N LYS a 7 -43.512 1.703 83.613 1.00 0.39 \ ATOM 60 CA LYS a 7 -43.089 2.808 84.443 1.00 0.39 \ ATOM 61 C LYS a 7 -41.622 2.628 84.758 1.00 0.39 \ ATOM 62 O LYS a 7 -40.867 3.580 84.734 1.00 0.39 \ ATOM 63 CB LYS a 7 -43.926 2.865 85.707 1.00 0.39 \ ATOM 64 CG LYS a 7 -43.447 3.827 86.736 1.00 0.39 \ ATOM 65 CD LYS a 7 -44.231 3.602 87.997 1.00 0.39 \ ATOM 66 CE LYS a 7 -44.323 4.842 88.832 1.00 0.39 \ ATOM 67 NZ LYS a 7 -45.584 4.803 89.585 1.00 0.39 \ ATOM 68 N LYS a 8 -41.215 1.396 85.042 1.00 0.39 \ ATOM 69 CA LYS a 8 -39.794 1.072 85.189 1.00 0.39 \ ATOM 70 C LYS a 8 -39.066 1.281 83.858 1.00 0.39 \ ATOM 71 O LYS a 8 -37.950 1.801 83.813 1.00 0.39 \ ATOM 72 CB LYS a 8 -39.607 -0.373 85.670 1.00 0.39 \ ATOM 73 CG LYS a 8 -38.159 -0.850 85.722 1.00 0.39 \ ATOM 74 CD LYS a 8 -38.058 -2.363 85.645 1.00 0.39 \ ATOM 75 CE LYS a 8 -38.617 -3.016 86.876 1.00 0.39 \ ATOM 76 NZ LYS a 8 -37.657 -3.007 87.982 1.00 0.39 \ ATOM 77 N ARG a 9 -39.716 0.866 82.775 1.00 0.39 \ ATOM 78 CA ARG a 9 -39.106 0.938 81.460 1.00 0.39 \ ATOM 79 C ARG a 9 -38.699 2.363 81.216 1.00 0.39 \ ATOM 80 O ARG a 9 -37.529 2.627 80.922 1.00 0.39 \ ATOM 81 CB ARG a 9 -40.053 0.452 80.369 1.00 0.39 \ ATOM 82 CG ARG a 9 -39.408 0.117 79.032 1.00 0.39 \ ATOM 83 CD ARG a 9 -40.452 0.404 77.958 1.00 0.39 \ ATOM 84 NE ARG a 9 -40.530 -0.460 76.767 1.00 0.39 \ ATOM 85 CZ ARG a 9 -40.542 -1.785 76.749 1.00 0.39 \ ATOM 86 NH1 ARG a 9 -40.433 -2.482 77.859 1.00 0.39 \ ATOM 87 NH2 ARG a 9 -40.640 -2.411 75.594 1.00 0.39 \ ATOM 88 N THR a 10 -39.642 3.287 81.383 1.00 -2.46 \ ATOM 89 CA THR a 10 -39.341 4.668 81.043 1.00 -2.46 \ ATOM 90 C THR a 10 -38.488 5.290 82.136 1.00 -2.46 \ ATOM 91 O THR a 10 -37.724 6.216 81.872 1.00 -2.46 \ ATOM 92 CB THR a 10 -40.604 5.501 80.795 1.00 -2.46 \ ATOM 93 OG1 THR a 10 -41.347 5.607 82.001 1.00 -2.46 \ ATOM 94 CG2 THR a 10 -41.478 4.845 79.704 1.00 -2.46 \ ATOM 95 N ARG a 11 -38.571 4.753 83.349 1.00 0.39 \ ATOM 96 CA ARG a 11 -37.717 5.224 84.446 1.00 0.39 \ ATOM 97 C ARG a 11 -36.218 5.073 84.073 1.00 0.39 \ ATOM 98 O ARG a 11 -35.433 6.014 84.188 1.00 0.39 \ ATOM 99 CB ARG a 11 -38.041 4.449 85.730 1.00 0.39 \ ATOM 100 CG ARG a 11 -38.185 5.271 87.009 1.00 0.39 \ ATOM 101 CD ARG a 11 -39.511 5.997 87.046 1.00 0.39 \ ATOM 102 NE ARG a 11 -40.009 6.294 88.396 1.00 0.39 \ ATOM 103 CZ ARG a 11 -40.462 5.388 89.257 1.00 0.39 \ ATOM 104 NH1 ARG a 11 -40.437 4.111 88.944 1.00 0.39 \ ATOM 105 NH2 ARG a 11 -40.923 5.753 90.439 1.00 0.39 \ ATOM 106 N ARG a 12 -35.855 3.869 83.624 1.00 0.39 \ ATOM 107 CA ARG a 12 -34.502 3.525 83.186 1.00 0.39 \ ATOM 108 C ARG a 12 -34.098 4.472 82.117 1.00 0.39 \ ATOM 109 O ARG a 12 -33.038 5.070 82.174 1.00 0.39 \ ATOM 110 CB ARG a 12 -34.417 2.098 82.611 1.00 0.39 \ ATOM 111 CG ARG a 12 -34.822 0.955 83.514 1.00 0.39 \ ATOM 112 CD ARG a 12 -34.853 -0.303 82.702 1.00 0.39 \ ATOM 113 NE ARG a 12 -35.006 -1.499 83.510 1.00 0.39 \ ATOM 114 CZ ARG a 12 -35.492 -2.642 83.041 1.00 0.39 \ ATOM 115 NH1 ARG a 12 -35.877 -2.718 81.779 1.00 0.39 \ ATOM 116 NH2 ARG a 12 -35.612 -3.703 83.826 1.00 0.39 \ ATOM 117 N LEU a 13 -34.970 4.572 81.125 1.00 0.39 \ ATOM 118 CA LEU a 13 -34.700 5.317 79.914 1.00 0.39 \ ATOM 119 C LEU a 13 -34.344 6.769 80.245 1.00 0.39 \ ATOM 120 O LEU a 13 -33.473 7.356 79.610 1.00 0.39 \ ATOM 121 CB LEU a 13 -35.916 5.212 78.975 1.00 0.39 \ ATOM 122 CG LEU a 13 -36.051 6.000 77.664 1.00 0.39 \ ATOM 123 CD1 LEU a 13 -36.532 7.368 77.964 1.00 0.39 \ ATOM 124 CD2 LEU a 13 -34.748 6.079 76.871 1.00 0.39 \ ATOM 125 N LYS a 14 -35.000 7.328 81.260 1.00 0.39 \ ATOM 126 CA LYS a 14 -34.725 8.699 81.692 1.00 0.39 \ ATOM 127 C LYS a 14 -33.324 8.815 82.278 1.00 0.39 \ ATOM 128 O LYS a 14 -32.622 9.788 82.055 1.00 0.39 \ ATOM 129 CB LYS a 14 -35.754 9.171 82.734 1.00 0.39 \ ATOM 130 CG LYS a 14 -37.170 9.368 82.209 1.00 0.39 \ ATOM 131 CD LYS a 14 -38.010 10.236 83.139 1.00 0.39 \ ATOM 132 CE LYS a 14 -38.339 9.486 84.416 1.00 0.39 \ ATOM 133 NZ LYS a 14 -39.322 10.194 85.312 1.00 0.39 \ ATOM 134 N ARG a 15 -32.940 7.805 83.047 1.00 0.39 \ ATOM 135 CA ARG a 15 -31.670 7.783 83.748 1.00 0.39 \ ATOM 136 C ARG a 15 -30.522 7.666 82.752 1.00 0.39 \ ATOM 137 O ARG a 15 -29.387 8.104 83.021 1.00 0.39 \ ATOM 138 CB ARG a 15 -31.645 6.628 84.742 1.00 0.39 \ ATOM 139 CG ARG a 15 -30.308 6.421 85.381 1.00 0.39 \ ATOM 140 CD ARG a 15 -30.353 5.343 86.441 1.00 0.39 \ ATOM 141 NE ARG a 15 -31.397 4.362 86.180 1.00 0.39 \ ATOM 142 CZ ARG a 15 -31.561 3.266 86.912 1.00 0.39 \ ATOM 143 NH1 ARG a 15 -30.727 3.040 87.926 1.00 0.39 \ ATOM 144 NH2 ARG a 15 -32.550 2.406 86.640 1.00 0.39 \ ATOM 145 N LYS a 16 -30.841 7.090 81.590 1.00 0.39 \ ATOM 146 CA LYS a 16 -29.894 6.936 80.486 1.00 0.39 \ ATOM 147 C LYS a 16 -29.757 8.234 79.680 1.00 0.39 \ ATOM 148 O LYS a 16 -28.639 8.675 79.408 1.00 0.39 \ ATOM 149 CB LYS a 16 -30.316 5.783 79.571 1.00 0.39 \ ATOM 150 CG LYS a 16 -29.231 5.385 78.568 1.00 0.39 \ ATOM 151 CD LYS a 16 -28.746 3.930 78.731 1.00 0.39 \ ATOM 152 CE LYS a 16 -27.417 3.768 78.030 1.00 0.39 \ ATOM 153 NZ LYS a 16 -27.012 5.049 77.330 1.00 0.39 \ ATOM 154 N ARG a 17 -30.884 8.852 79.315 1.00 0.39 \ ATOM 155 CA ARG a 17 -30.839 10.153 78.658 1.00 0.39 \ ATOM 156 C ARG a 17 -30.167 11.095 79.633 1.00 0.39 \ ATOM 157 O ARG a 17 -29.533 12.069 79.244 1.00 0.39 \ ATOM 158 CB ARG a 17 -32.240 10.669 78.262 1.00 0.39 \ ATOM 159 CG ARG a 17 -33.121 9.632 77.559 1.00 0.39 \ ATOM 160 CD ARG a 17 -34.160 10.178 76.571 1.00 0.39 \ ATOM 161 NE ARG a 17 -35.493 10.310 77.169 1.00 0.39 \ ATOM 162 CZ ARG a 17 -36.659 10.138 76.534 1.00 0.39 \ ATOM 163 NH1 ARG a 17 -36.708 9.770 75.250 1.00 0.39 \ ATOM 164 NH2 ARG a 17 -37.792 10.307 77.208 1.00 0.39 \ ATOM 165 N ARG a 18 -30.292 10.780 80.920 1.00 0.39 \ ATOM 166 CA ARG a 18 -29.651 11.574 81.954 1.00 0.39 \ ATOM 167 C ARG a 18 -28.144 11.428 81.823 1.00 0.39 \ ATOM 168 O ARG a 18 -27.435 12.437 81.853 1.00 0.39 \ ATOM 169 CB ARG a 18 -30.125 11.178 83.351 1.00 0.39 \ ATOM 170 CG ARG a 18 -30.685 12.357 84.105 1.00 0.39 \ ATOM 171 CD ARG a 18 -31.078 12.009 85.511 1.00 0.39 \ ATOM 172 NE ARG a 18 -32.144 11.011 85.543 1.00 0.39 \ ATOM 173 CZ ARG a 18 -32.579 10.423 86.661 1.00 0.39 \ ATOM 174 NH1 ARG a 18 -32.039 10.757 87.839 1.00 0.39 \ ATOM 175 NH2 ARG a 18 -33.550 9.499 86.609 1.00 0.39 \ ATOM 176 N LYS a 19 -27.669 10.192 81.636 1.00 0.39 \ ATOM 177 CA LYS a 19 -26.239 9.930 81.444 1.00 0.39 \ ATOM 178 C LYS a 19 -25.684 10.677 80.218 1.00 0.39 \ ATOM 179 O LYS a 19 -24.596 11.256 80.236 1.00 0.39 \ ATOM 180 CB LYS a 19 -25.986 8.413 81.305 1.00 0.39 \ ATOM 181 CG LYS a 19 -25.163 7.774 82.427 1.00 0.39 \ ATOM 182 CD LYS a 19 -25.832 7.997 83.809 1.00 0.39 \ ATOM 183 CE LYS a 19 -25.054 7.374 85.009 1.00 0.39 \ ATOM 184 NZ LYS a 19 -25.246 5.878 85.198 1.00 0.39 \ ATOM 185 N VAL a 20 -26.454 10.673 79.152 1.00 -2.46 \ ATOM 186 CA VAL a 20 -25.922 11.078 77.885 1.00 -2.46 \ ATOM 187 C VAL a 20 -25.993 12.585 77.749 1.00 -2.46 \ ATOM 188 O VAL a 20 -25.268 13.204 76.986 1.00 -2.46 \ ATOM 189 CB VAL a 20 -26.665 10.347 76.771 1.00 -2.46 \ ATOM 190 CG1 VAL a 20 -25.993 10.541 75.450 1.00 -2.46 \ ATOM 191 CG2 VAL a 20 -26.647 8.884 77.086 1.00 -2.46 \ ATOM 192 N ARG a 21 -26.847 13.216 78.515 1.00 0.39 \ ATOM 193 CA ARG a 21 -26.851 14.658 78.415 1.00 0.39 \ ATOM 194 C ARG a 21 -25.657 15.138 79.196 1.00 0.39 \ ATOM 195 O ARG a 21 -24.897 15.968 78.731 1.00 0.39 \ ATOM 196 CB ARG a 21 -28.142 15.262 78.940 1.00 0.39 \ ATOM 197 CG ARG a 21 -29.038 15.792 77.871 1.00 0.39 \ ATOM 198 CD ARG a 21 -30.151 16.538 78.515 1.00 0.39 \ ATOM 199 NE ARG a 21 -30.078 17.961 78.255 1.00 0.39 \ ATOM 200 CZ ARG a 21 -30.792 18.861 78.907 1.00 0.39 \ ATOM 201 NH1 ARG a 21 -30.688 20.141 78.614 1.00 0.39 \ ATOM 202 NH2 ARG a 21 -31.613 18.474 79.853 1.00 0.39 \ ATOM 203 N ALA a 22 -25.484 14.562 80.378 1.00 -2.46 \ ATOM 204 CA ALA a 22 -24.407 14.923 81.261 1.00 -2.46 \ ATOM 205 C ALA a 22 -23.062 14.750 80.560 1.00 -2.46 \ ATOM 206 O ALA a 22 -22.140 15.517 80.797 1.00 -2.46 \ ATOM 207 CB ALA a 22 -24.476 14.093 82.522 1.00 -2.46 \ ATOM 208 N ARG a 23 -22.950 13.762 79.674 1.00 0.39 \ ATOM 209 CA ARG a 23 -21.766 13.626 78.825 1.00 0.39 \ ATOM 210 C ARG a 23 -21.374 14.937 78.182 1.00 0.39 \ ATOM 211 O ARG a 23 -20.252 15.114 77.716 1.00 0.39 \ ATOM 212 CB ARG a 23 -22.013 12.653 77.692 1.00 0.39 \ ATOM 213 CG ARG a 23 -21.760 11.200 77.902 1.00 0.39 \ ATOM 214 CD ARG a 23 -22.096 10.539 76.568 1.00 0.39 \ ATOM 215 NE ARG a 23 -21.111 9.554 76.199 1.00 0.39 \ ATOM 216 CZ ARG a 23 -19.928 9.848 75.670 1.00 0.39 \ ATOM 217 NH1 ARG a 23 -19.083 8.869 75.380 1.00 0.39 \ ATOM 218 NH2 ARG a 23 -19.573 11.106 75.441 1.00 0.39 \ ATOM 219 N SER a 24 -22.336 15.841 78.115 1.00 -1.00 \ ATOM 220 CA SER a 24 -22.203 17.055 77.347 1.00 -1.00 \ ATOM 221 C SER a 24 -22.408 18.298 78.193 1.00 -1.00 \ ATOM 222 O SER a 24 -22.585 19.379 77.650 1.00 -1.00 \ ATOM 223 CB SER a 24 -23.204 17.035 76.205 1.00 -1.00 \ ATOM 224 OG SER a 24 -23.037 18.179 75.405 1.00 -1.00 \ ATOM 225 N LYS a 25 -22.385 18.128 79.515 1.00 -1.00 \ ATOM 226 CA LYS a 25 -22.617 19.202 80.486 1.00 -1.00 \ ATOM 227 C LYS a 25 -21.852 20.478 80.183 1.00 -1.00 \ ATOM 228 O LYS a 25 -20.783 20.423 79.582 1.00 -1.00 \ ATOM 229 CB LYS a 25 -22.236 18.733 81.881 1.00 -1.00 \ ATOM 230 CG LYS a 25 -23.404 18.555 82.814 1.00 -1.00 \ ATOM 231 CD LYS a 25 -22.962 18.742 84.267 1.00 -1.00 \ ATOM 232 CE LYS a 25 -22.790 17.412 84.968 1.00 -1.00 \ ATOM 233 NZ LYS a 25 -24.081 16.965 85.598 1.00 -1.00 \ """, "e4ulra1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e4ulra1_csv", state=0, origin=1) cmd.zoom("e4ulra1_csv", animate=-1)