cmd.read_pdbstr("""\ ATOM 1 N GLY D 5 32.642 -17.129 34.693 1.00 -1.00 \ ATOM 2 CA GLY D 5 33.997 -17.609 34.888 1.00 -1.00 \ ATOM 3 C GLY D 5 34.092 -18.639 35.996 1.00 -1.00 \ ATOM 4 O GLY D 5 35.029 -18.624 36.794 1.00 -1.00 \ ATOM 5 N CYS D 6 33.118 -19.542 36.040 1.00 0.45 \ ATOM 6 CA CYS D 6 33.079 -20.587 37.057 1.00 0.45 \ ATOM 7 C CYS D 6 33.885 -21.810 36.638 1.00 0.45 \ ATOM 8 O CYS D 6 34.165 -22.688 37.454 1.00 0.45 \ ATOM 9 CB CYS D 6 31.635 -20.987 37.361 1.00 0.45 \ ATOM 10 SG CYS D 6 30.634 -19.653 38.049 1.00 0.45 \ ATOM 11 N ALA D 7 34.256 -21.864 35.363 1.00 0.75 \ ATOM 12 CA ALA D 7 35.019 -22.991 34.846 1.00 0.75 \ ATOM 13 C ALA D 7 36.431 -22.973 35.420 1.00 0.75 \ ATOM 14 O ALA D 7 36.882 -21.951 35.939 1.00 0.75 \ ATOM 15 CB ALA D 7 35.057 -22.959 33.326 1.00 0.75 \ ATOM 16 N LEU D 8 37.112 -24.113 35.327 1.00 -0.77 \ ATOM 17 CA LEU D 8 38.447 -24.292 35.897 1.00 -0.77 \ ATOM 18 C LEU D 8 38.450 -24.027 37.401 1.00 -0.77 \ ATOM 19 O LEU D 8 38.798 -22.935 37.850 1.00 -0.77 \ ATOM 20 CB LEU D 8 39.464 -23.383 35.200 1.00 -0.77 \ ATOM 21 CG LEU D 8 39.565 -23.507 33.678 1.00 -0.77 \ ATOM 22 CD1 LEU D 8 40.609 -22.544 33.131 1.00 -0.77 \ ATOM 23 CD2 LEU D 8 39.884 -24.938 33.272 1.00 -0.77 \ ATOM 24 N THR D 13 34.981 -30.812 43.613 1.00 0.22 \ ATOM 25 CA THR D 13 34.228 -30.694 44.856 1.00 0.22 \ ATOM 26 C THR D 13 33.087 -29.693 44.714 1.00 0.22 \ ATOM 27 O THR D 13 33.291 -28.566 44.264 1.00 0.22 \ ATOM 28 CB THR D 13 35.134 -30.263 46.027 1.00 0.22 \ ATOM 29 OG1 THR D 13 36.231 -31.177 46.149 1.00 0.22 \ ATOM 30 CG2 THR D 13 34.349 -30.239 47.332 1.00 0.22 \ ATOM 31 N CYS D 14 31.886 -30.114 45.099 1.00 1.83 \ ATOM 32 CA CYS D 14 30.716 -29.247 45.042 1.00 1.83 \ ATOM 33 C CYS D 14 30.854 -28.078 46.011 1.00 1.83 \ ATOM 34 O CYS D 14 30.445 -26.956 45.710 1.00 1.83 \ ATOM 35 CB CYS D 14 29.445 -30.039 45.353 1.00 1.83 \ ATOM 36 SG CYS D 14 27.956 -29.022 45.498 1.00 1.83 \ ATOM 37 N GLU D 15 31.433 -28.350 47.176 1.00 -0.71 \ ATOM 38 CA GLU D 15 31.603 -27.334 48.207 1.00 -0.71 \ ATOM 39 C GLU D 15 32.608 -26.271 47.773 1.00 -0.71 \ ATOM 40 O GLU D 15 32.435 -25.086 48.059 1.00 -0.71 \ ATOM 41 CB GLU D 15 32.047 -27.980 49.521 1.00 -0.71 \ ATOM 42 CG GLU D 15 32.144 -27.016 50.691 1.00 -0.71 \ ATOM 43 CD GLU D 15 32.472 -27.715 51.995 1.00 -0.71 \ ATOM 44 OE1 GLU D 15 32.561 -28.961 51.997 1.00 -0.71 \ ATOM 45 OE2 GLU D 15 32.640 -27.020 53.019 1.00 -0.71 \ ATOM 46 N ASP D 16 33.657 -26.700 47.078 1.00 -0.41 \ ATOM 47 CA ASP D 16 34.679 -25.781 46.588 1.00 -0.41 \ ATOM 48 C ASP D 16 34.213 -25.058 45.327 1.00 -0.41 \ ATOM 49 O ASP D 16 34.741 -24.003 44.974 1.00 -0.41 \ ATOM 50 CB ASP D 16 35.986 -26.527 46.314 1.00 -0.41 \ ATOM 51 CG ASP D 16 36.579 -27.143 47.565 1.00 -0.41 \ ATOM 52 OD1 ASP D 16 36.364 -26.587 48.662 1.00 -0.41 \ ATOM 53 OD2 ASP D 16 37.264 -28.181 47.452 1.00 -0.41 \ ATOM 54 N CYS D 17 33.221 -25.633 44.655 1.00 1.83 \ ATOM 55 CA CYS D 17 32.672 -25.045 43.440 1.00 1.83 \ ATOM 56 C CYS D 17 31.919 -23.757 43.751 1.00 1.83 \ ATOM 57 O CYS D 17 31.851 -22.847 42.925 1.00 1.83 \ ATOM 58 CB CYS D 17 31.748 -26.039 42.733 1.00 1.83 \ ATOM 59 SG CYS D 17 30.934 -25.393 41.252 1.00 1.83 \ ATOM 60 N LEU D 18 31.357 -23.687 44.952 1.00 0.59 \ ATOM 61 CA LEU D 18 30.573 -22.531 45.362 1.00 0.59 \ ATOM 62 C LEU D 18 31.475 -21.471 45.981 1.00 0.59 \ ATOM 63 O LEU D 18 31.069 -20.323 46.165 1.00 0.59 \ ATOM 64 CB LEU D 18 29.488 -22.945 46.358 1.00 0.59 \ ATOM 65 CG LEU D 18 28.701 -24.223 46.052 1.00 0.59 \ ATOM 66 CD1 LEU D 18 27.616 -24.445 47.097 1.00 0.59 \ ATOM 67 CD2 LEU D 18 28.111 -24.213 44.647 1.00 0.59 \ ATOM 68 N LEU D 19 32.705 -21.866 46.297 1.00 -0.75 \ ATOM 69 CA LEU D 19 33.655 -20.981 46.958 1.00 -0.75 \ ATOM 70 C LEU D 19 34.399 -20.107 45.951 1.00 -0.75 \ ATOM 71 O LEU D 19 34.780 -18.978 46.260 1.00 -0.75 \ ATOM 72 CB LEU D 19 34.649 -21.802 47.789 1.00 -0.75 \ ATOM 73 CG LEU D 19 35.580 -21.090 48.775 1.00 -0.75 \ ATOM 74 CD1 LEU D 19 35.868 -21.996 49.961 1.00 -0.75 \ ATOM 75 CD2 LEU D 19 36.886 -20.668 48.113 1.00 -0.75 \ ATOM 76 N ILE D 20 34.599 -20.632 44.746 1.00 -0.30 \ ATOM 77 CA ILE D 20 35.347 -19.914 43.718 1.00 -0.30 \ ATOM 78 C ILE D 20 34.561 -18.735 43.152 1.00 -0.30 \ ATOM 79 O ILE D 20 35.131 -17.848 42.516 1.00 -0.30 \ ATOM 80 CB ILE D 20 35.750 -20.848 42.561 1.00 -0.30 \ ATOM 81 CG1 ILE D 20 34.510 -21.359 41.826 1.00 -0.30 \ ATOM 82 CG2 ILE D 20 36.585 -22.009 43.080 1.00 -0.30 \ ATOM 83 CD1 ILE D 20 34.826 -22.259 40.654 1.00 -0.30 \ ATOM 84 N GLY D 21 33.252 -18.728 43.383 1.00 -0.03 \ ATOM 85 CA GLY D 21 32.406 -17.653 42.899 1.00 -0.03 \ ATOM 86 C GLY D 21 30.949 -17.824 43.279 1.00 -0.03 \ ATOM 87 O GLY D 21 30.440 -18.944 43.308 1.00 -0.03 \ ATOM 88 N PRO D 22 30.269 -16.707 43.579 1.00 0.34 \ ATOM 89 CA PRO D 22 28.844 -16.697 43.926 1.00 0.34 \ ATOM 90 C PRO D 22 27.944 -17.006 42.731 1.00 0.34 \ ATOM 91 O PRO D 22 26.791 -17.396 42.918 1.00 0.34 \ ATOM 92 CB PRO D 22 28.616 -15.268 44.424 1.00 0.34 \ ATOM 93 CG PRO D 22 29.660 -14.465 43.734 1.00 0.34 \ ATOM 94 CD PRO D 22 30.861 -15.360 43.647 1.00 0.34 \ ATOM 95 N GLN D 23 28.467 -16.829 41.521 1.00 -0.99 \ ATOM 96 CA GLN D 23 27.685 -17.057 40.310 1.00 -0.99 \ ATOM 97 C GLN D 23 27.830 -18.494 39.816 1.00 -0.99 \ ATOM 98 O GLN D 23 27.188 -18.894 38.845 1.00 -0.99 \ ATOM 99 CB GLN D 23 28.109 -16.086 39.203 1.00 -0.99 \ ATOM 100 CG GLN D 23 29.529 -16.295 38.687 1.00 -0.99 \ ATOM 101 CD GLN D 23 30.586 -15.687 39.589 1.00 -0.99 \ ATOM 102 OE1 GLN D 23 30.275 -14.927 40.507 1.00 -0.99 \ ATOM 103 NE2 GLN D 23 31.846 -16.022 39.333 1.00 -0.99 \ ATOM 104 N CYS D 24 28.677 -19.265 40.489 1.00 1.83 \ ATOM 105 CA CYS D 24 28.937 -20.646 40.096 1.00 1.83 \ ATOM 106 C CYS D 24 27.913 -21.616 40.681 1.00 1.83 \ ATOM 107 O CYS D 24 27.228 -21.302 41.655 1.00 1.83 \ ATOM 108 CB CYS D 24 30.349 -21.054 40.514 1.00 1.83 \ ATOM 109 SG CYS D 24 31.649 -20.044 39.767 1.00 1.83 \ ATOM 110 N ALA D 25 27.815 -22.795 40.075 1.00 0.27 \ ATOM 111 CA ALA D 25 26.869 -23.814 40.516 1.00 0.27 \ ATOM 112 C ALA D 25 27.395 -25.211 40.210 1.00 0.27 \ ATOM 113 O ALA D 25 28.233 -25.387 39.328 1.00 0.27 \ ATOM 114 CB ALA D 25 25.516 -23.602 39.858 1.00 0.27 \ ATOM 115 N TRP D 26 26.894 -26.203 40.938 1.00 1.83 \ ATOM 116 CA TRP D 26 27.315 -27.584 40.735 1.00 1.83 \ ATOM 117 C TRP D 26 26.138 -28.444 40.284 1.00 1.83 \ ATOM 118 O TRP D 26 25.025 -28.300 40.790 1.00 1.83 \ ATOM 119 CB TRP D 26 27.930 -28.151 42.015 1.00 1.83 \ ATOM 120 CG TRP D 26 28.494 -29.530 41.855 1.00 1.83 \ ATOM 121 CD1 TRP D 26 27.853 -30.712 42.085 1.00 1.83 \ ATOM 122 CD2 TRP D 26 29.822 -29.868 41.435 1.00 1.83 \ ATOM 123 NE1 TRP D 26 28.698 -31.765 41.831 1.00 1.83 \ ATOM 124 CE2 TRP D 26 29.913 -31.274 41.431 1.00 1.83 \ ATOM 125 CE3 TRP D 26 30.941 -29.118 41.060 1.00 1.83 \ ATOM 126 CZ2 TRP D 26 31.079 -31.945 41.067 1.00 1.83 \ ATOM 127 CZ3 TRP D 26 32.098 -29.786 40.700 1.00 1.83 \ ATOM 128 CH2 TRP D 26 32.157 -31.185 40.705 1.00 1.83 \ ATOM 129 N CYS D 27 26.391 -29.337 39.332 1.00 1.83 \ ATOM 130 CA CYS D 27 25.351 -30.214 38.806 1.00 1.83 \ ATOM 131 C CYS D 27 25.428 -31.615 39.405 1.00 1.83 \ ATOM 132 O CYS D 27 26.290 -32.412 39.036 1.00 1.83 \ ATOM 133 CB CYS D 27 25.445 -30.296 37.282 1.00 1.83 \ ATOM 134 SG CYS D 27 24.221 -31.384 36.517 1.00 1.83 \ ATOM 135 N ALA D 28 24.520 -31.907 40.330 1.00 -0.52 \ ATOM 136 CA ALA D 28 24.478 -33.212 40.979 1.00 -0.52 \ ATOM 137 C ALA D 28 23.936 -34.276 40.031 1.00 -0.52 \ ATOM 138 O ALA D 28 23.994 -35.471 40.323 1.00 -0.52 \ ATOM 139 CB ALA D 28 23.637 -33.149 42.245 1.00 -0.52 \ ATOM 140 N ARG D 41 30.446 -30.864 36.893 1.00 1.83 \ ATOM 141 CA ARG D 41 30.905 -29.624 36.279 1.00 1.83 \ ATOM 142 C ARG D 41 30.427 -28.392 37.042 1.00 1.83 \ ATOM 143 O ARG D 41 29.269 -28.314 37.453 1.00 1.83 \ ATOM 144 CB ARG D 41 30.426 -29.548 34.827 1.00 1.83 \ ATOM 145 CG ARG D 41 30.862 -28.296 34.086 1.00 1.83 \ ATOM 146 CD ARG D 41 30.380 -28.312 32.644 1.00 1.83 \ ATOM 147 NE ARG D 41 30.917 -29.445 31.899 1.00 1.83 \ ATOM 148 CZ ARG D 41 32.082 -29.429 31.261 1.00 1.83 \ ATOM 149 NH1 ARG D 41 32.833 -28.335 31.277 1.00 1.83 \ ATOM 150 NH2 ARG D 41 32.498 -30.504 30.605 1.00 1.83 \ ATOM 151 N CYS D 42 31.329 -27.433 37.229 1.00 1.83 \ ATOM 152 CA CYS D 42 30.994 -26.186 37.906 1.00 1.83 \ ATOM 153 C CYS D 42 30.875 -25.037 36.908 1.00 1.83 \ ATOM 154 O CYS D 42 31.884 -24.537 36.412 1.00 1.83 \ ATOM 155 CB CYS D 42 32.042 -25.857 38.970 1.00 1.83 \ ATOM 156 SG CYS D 42 31.794 -24.269 39.795 1.00 1.83 \ ATOM 157 N ASP D 43 29.647 -24.609 36.629 1.00 0.34 \ ATOM 158 CA ASP D 43 29.417 -23.512 35.693 1.00 0.34 \ ATOM 159 C ASP D 43 28.134 -22.747 36.004 1.00 0.34 \ ATOM 160 O ASP D 43 27.302 -23.200 36.789 1.00 0.34 \ ATOM 161 CB ASP D 43 29.368 -24.033 34.254 1.00 0.34 \ ATOM 162 CG ASP D 43 30.748 -24.243 33.661 1.00 0.34 \ ATOM 163 OD1 ASP D 43 31.675 -23.489 34.028 1.00 0.34 \ ATOM 164 OD2 ASP D 43 30.906 -25.159 32.828 1.00 0.34 \ ATOM 165 N THR D 44 27.990 -21.581 35.382 1.00 -0.92 \ ATOM 166 CA THR D 44 26.795 -20.761 35.538 1.00 -0.92 \ ATOM 167 C THR D 44 25.571 -21.475 34.968 1.00 -0.92 \ ATOM 168 O THR D 44 25.680 -22.195 33.975 1.00 -0.92 \ ATOM 169 CB THR D 44 26.956 -19.394 34.845 1.00 -0.92 \ ATOM 170 OG1 THR D 44 27.152 -19.588 33.439 1.00 -0.92 \ ATOM 171 CG2 THR D 44 28.147 -18.642 35.420 1.00 -0.92 \ ATOM 172 N PRO D 45 24.402 -21.281 35.602 1.00 -0.89 \ ATOM 173 CA PRO D 45 23.149 -21.910 35.165 1.00 -0.89 \ ATOM 174 C PRO D 45 22.783 -21.563 33.723 1.00 -0.89 \ ATOM 175 O PRO D 45 22.822 -22.448 32.868 1.00 -0.89 \ ATOM 176 CB PRO D 45 22.114 -21.340 36.138 1.00 -0.89 \ ATOM 177 CG PRO D 45 22.896 -20.993 37.354 1.00 -0.89 \ ATOM 178 CD PRO D 45 24.226 -20.517 36.850 1.00 -0.89 \ ATOM 179 N CYS D 53 22.028 -30.287 32.320 1.00 1.83 \ ATOM 180 CA CYS D 53 21.721 -30.585 33.713 1.00 1.83 \ ATOM 181 C CYS D 53 20.295 -30.175 34.059 1.00 1.83 \ ATOM 182 O CYS D 53 19.860 -29.071 33.727 1.00 1.83 \ ATOM 183 CB CYS D 53 22.710 -29.887 34.648 1.00 1.83 \ ATOM 184 SG CYS D 53 22.500 -30.315 36.392 1.00 1.83 \ ATOM 185 N GLN D 54 19.571 -31.068 34.728 1.00 -1.01 \ ATOM 186 CA GLN D 54 18.182 -30.809 35.083 1.00 -1.01 \ ATOM 187 C GLN D 54 18.103 -29.776 36.202 1.00 -1.01 \ ATOM 188 O GLN D 54 19.050 -29.611 36.970 1.00 -1.01 \ ATOM 189 CB GLN D 54 17.485 -32.105 35.510 1.00 -1.01 \ ATOM 190 CG GLN D 54 17.404 -33.174 34.425 1.00 -1.01 \ ATOM 191 CD GLN D 54 18.708 -33.931 34.240 1.00 -1.01 \ ATOM 192 OE1 GLN D 54 19.696 -33.669 34.928 1.00 -1.01 \ ATOM 193 NE2 GLN D 54 18.716 -34.877 33.307 1.00 -1.01 \ ATOM 194 N LEU D 55 16.967 -29.091 36.295 1.00 -0.96 \ ATOM 195 CA LEU D 55 16.790 -28.013 37.265 1.00 -0.96 \ ATOM 196 C LEU D 55 16.788 -28.497 38.714 1.00 -0.96 \ ATOM 197 O LEU D 55 17.286 -27.807 39.604 1.00 -0.96 \ ATOM 198 CB LEU D 55 15.494 -27.253 36.974 1.00 -0.96 \ ATOM 199 CG LEU D 55 15.442 -26.527 35.628 1.00 -0.96 \ ATOM 200 CD1 LEU D 55 14.122 -25.792 35.462 1.00 -0.96 \ ATOM 201 CD2 LEU D 55 16.617 -25.570 35.491 1.00 -0.96 \ ATOM 202 N ASN D 56 16.231 -29.680 38.947 1.00 -0.89 \ ATOM 203 CA ASN D 56 16.158 -30.235 40.294 1.00 -0.89 \ ATOM 204 C ASN D 56 17.510 -30.744 40.787 1.00 -0.89 \ ATOM 205 O ASN D 56 17.713 -30.932 41.987 1.00 -0.89 \ ATOM 206 CB ASN D 56 15.127 -31.363 40.346 1.00 -0.89 \ ATOM 207 CG ASN D 56 13.754 -30.919 39.877 1.00 -0.89 \ ATOM 208 OD1 ASN D 56 13.390 -29.750 40.003 1.00 -0.89 \ ATOM 209 ND2 ASN D 56 12.985 -31.853 39.330 1.00 -0.89 \ ATOM 210 N PHE D 57 18.427 -30.968 39.853 1.00 -0.94 \ ATOM 211 CA PHE D 57 19.776 -31.413 40.182 1.00 -0.94 \ ATOM 212 C PHE D 57 20.723 -30.233 40.398 1.00 -0.94 \ ATOM 213 O PHE D 57 21.715 -30.348 41.118 1.00 -0.94 \ ATOM 214 CB PHE D 57 20.313 -32.336 39.087 1.00 -0.94 \ ATOM 215 CG PHE D 57 19.807 -33.748 39.187 1.00 -0.94 \ ATOM 216 CD1 PHE D 57 18.555 -34.084 38.697 1.00 -0.94 \ ATOM 217 CD2 PHE D 57 20.577 -34.736 39.779 1.00 -0.94 \ ATOM 218 CE1 PHE D 57 18.084 -35.381 38.790 1.00 -0.94 \ ATOM 219 CE2 PHE D 57 20.111 -36.034 39.874 1.00 -0.94 \ ATOM 220 CZ PHE D 57 18.863 -36.357 39.379 1.00 -0.94 \ ATOM 221 N ILE D 58 20.411 -29.102 39.771 1.00 0.26 \ ATOM 222 CA ILE D 58 21.210 -27.887 39.920 1.00 0.26 \ ATOM 223 C ILE D 58 21.085 -27.311 41.326 1.00 0.26 \ ATOM 224 O ILE D 58 19.981 -27.065 41.814 1.00 0.26 \ ATOM 225 CB ILE D 58 20.802 -26.805 38.898 1.00 0.26 \ ATOM 226 CG1 ILE D 58 21.100 -27.274 37.474 1.00 0.26 \ ATOM 227 CG2 ILE D 58 21.541 -25.506 39.172 1.00 0.26 \ ATOM 228 CD1 ILE D 58 20.700 -26.281 36.404 1.00 0.26 \ ATOM 229 N GLU D 59 22.226 -27.102 41.974 1.00 0.46 \ ATOM 230 CA GLU D 59 22.256 -26.605 43.344 1.00 0.46 \ ATOM 231 C GLU D 59 22.746 -25.163 43.412 1.00 0.46 \ ATOM 232 O GLU D 59 23.885 -24.867 43.052 1.00 0.46 \ ATOM 233 CB GLU D 59 23.151 -27.491 44.209 1.00 0.46 \ ATOM 234 CG GLU D 59 22.684 -28.928 44.325 1.00 0.46 \ ATOM 235 CD GLU D 59 23.712 -29.818 44.993 1.00 0.46 \ ATOM 236 OE1 GLU D 59 24.916 -29.654 44.707 1.00 0.46 \ ATOM 237 OE2 GLU D 59 23.317 -30.678 45.807 1.00 0.46 \ ATOM 238 N ASN D 60 21.875 -24.271 43.873 1.00 -1.00 \ ATOM 239 CA ASN D 60 22.220 -22.861 44.005 1.00 -1.00 \ ATOM 240 C ASN D 60 21.793 -22.284 45.349 1.00 -1.00 \ ATOM 241 O ASN D 60 20.629 -21.931 45.537 1.00 -1.00 \ ATOM 242 CB ASN D 60 21.588 -22.052 42.871 1.00 -1.00 \ ATOM 243 CG ASN D 60 22.485 -21.958 41.655 1.00 -1.00 \ ATOM 244 OD1 ASN D 60 23.698 -21.791 41.777 1.00 -1.00 \ ATOM 245 ND2 ASN D 60 21.892 -22.066 40.471 1.00 -1.00 \ ATOM 246 N PRO D 61 22.741 -22.189 46.293 1.00 -1.00 \ ATOM 247 CA PRO D 61 22.502 -21.575 47.603 1.00 -1.00 \ ATOM 248 C PRO D 61 22.441 -20.053 47.517 1.00 -1.00 \ ATOM 249 O PRO D 61 23.306 -19.375 48.073 1.00 -1.00 \ ATOM 250 CB PRO D 61 23.709 -22.028 48.424 1.00 -1.00 \ ATOM 251 CG PRO D 61 24.787 -22.199 47.415 1.00 -1.00 \ ATOM 252 CD PRO D 61 24.111 -22.716 46.175 1.00 -1.00 \ """, "e4um8D1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e4um8D1_csv", state=0, origin=1) cmd.zoom("e4um8D1_csv", animate=-1)