cmd.read_pdbstr("""\ ATOM 1 N PHE D 1 6.249 14.804 -8.096 1.00 -1.00 \ ATOM 2 CA PHE D 1 5.716 13.737 -8.904 1.00 -1.00 \ ATOM 3 C PHE D 1 4.816 12.870 -8.036 1.00 -1.00 \ ATOM 4 O PHE D 1 5.113 12.750 -6.928 1.00 -1.00 \ ATOM 5 CB PHE D 1 6.898 12.923 -9.485 1.00 -1.00 \ ATOM 6 CG PHE D 1 7.699 13.676 -10.488 1.00 -1.00 \ ATOM 7 CD1 PHE D 1 8.433 14.751 -10.111 1.00 -1.00 \ ATOM 8 CD2 PHE D 1 7.705 13.313 -11.803 1.00 -1.00 \ ATOM 9 CE1 PHE D 1 9.157 15.463 -11.030 1.00 -1.00 \ ATOM 10 CE2 PHE D 1 8.408 14.008 -12.735 1.00 -1.00 \ ATOM 11 CZ PHE D 1 9.127 15.092 -12.351 1.00 -1.00 \ ATOM 12 N VAL D 2 3.763 12.274 -8.568 1.00 -1.00 \ ATOM 13 CA VAL D 2 2.854 11.504 -7.707 1.00 -1.00 \ ATOM 14 C VAL D 2 3.711 10.407 -7.034 1.00 -1.00 \ ATOM 15 O VAL D 2 4.587 9.830 -7.648 1.00 -1.00 \ ATOM 16 CB VAL D 2 1.642 10.855 -8.454 1.00 -1.00 \ ATOM 17 CG1 VAL D 2 2.080 9.931 -9.565 1.00 -1.00 \ ATOM 18 N ASN D 3 3.397 10.080 -5.791 1.00 -0.47 \ ATOM 19 CA ASN D 3 4.003 8.864 -5.204 1.00 -0.47 \ ATOM 20 C ASN D 3 3.353 7.674 -5.824 1.00 -0.47 \ ATOM 21 O ASN D 3 2.149 7.584 -5.687 1.00 -0.47 \ ATOM 22 CB ASN D 3 3.701 8.905 -3.712 1.00 -0.47 \ ATOM 23 CG ASN D 3 4.055 7.627 -2.976 1.00 -0.47 \ ATOM 24 OD1 ASN D 3 4.707 6.741 -3.487 1.00 -0.47 \ ATOM 25 ND2 ASN D 3 3.652 7.588 -1.703 1.00 -0.47 \ ATOM 26 N GLN D 4 4.114 6.721 -6.430 1.00 0.23 \ ATOM 27 CA GLN D 4 3.568 5.569 -7.168 1.00 0.23 \ ATOM 28 C GLN D 4 3.321 4.381 -6.244 1.00 0.23 \ ATOM 29 O GLN D 4 2.804 3.374 -6.715 1.00 0.23 \ ATOM 30 CB GLN D 4 4.518 5.106 -8.185 1.00 0.23 \ ATOM 31 CG GLN D 4 4.694 6.157 -9.343 1.00 0.23 \ ATOM 32 CD GLN D 4 5.646 5.628 -10.349 1.00 0.23 \ ATOM 33 OE1 GLN D 4 5.390 4.660 -11.070 1.00 0.23 \ ATOM 34 NE2 GLN D 4 6.845 6.216 -10.378 1.00 0.23 \ ATOM 35 N HIS D 5 3.689 4.484 -4.988 1.00 -0.04 \ ATOM 36 CA HIS D 5 3.363 3.423 -4.055 1.00 -0.04 \ ATOM 37 C HIS D 5 1.927 3.526 -3.599 1.00 -0.04 \ ATOM 38 O HIS D 5 1.486 4.573 -3.301 1.00 -0.04 \ ATOM 39 CB HIS D 5 4.287 3.463 -2.828 1.00 -0.04 \ ATOM 40 CG HIS D 5 5.728 3.400 -3.176 1.00 -0.04 \ ATOM 41 ND1 HIS D 5 6.422 2.227 -3.285 1.00 -0.04 \ ATOM 42 CD2 HIS D 5 6.611 4.375 -3.434 1.00 -0.04 \ ATOM 43 CE1 HIS D 5 7.677 2.478 -3.605 1.00 -0.04 \ ATOM 44 NE2 HIS D 5 7.813 3.775 -3.706 1.00 -0.04 \ ATOM 45 N LEU D 6 1.258 2.383 -3.520 1.00 1.15 \ ATOM 46 CA LEU D 6 -0.158 2.267 -3.145 1.00 1.15 \ ATOM 47 C LEU D 6 -0.270 1.681 -1.766 1.00 1.15 \ ATOM 48 O LEU D 6 0.068 0.502 -1.572 1.00 1.15 \ ATOM 49 CB LEU D 6 -0.951 1.323 -4.049 1.00 1.15 \ ATOM 50 CG LEU D 6 -0.981 1.686 -5.520 1.00 1.15 \ ATOM 51 CD1 LEU D 6 -1.666 0.533 -6.287 1.00 1.15 \ ATOM 52 CD2 LEU D 6 -1.774 2.948 -5.688 1.00 1.15 \ ATOM 53 N CYS D 7 -0.585 2.534 -0.828 1.00 1.70 \ ATOM 54 CA CYS D 7 -0.550 2.108 0.540 1.00 1.70 \ ATOM 55 C CYS D 7 -1.821 2.374 1.299 1.00 1.70 \ ATOM 56 O CYS D 7 -2.643 3.283 0.999 1.00 1.70 \ ATOM 57 CB CYS D 7 0.610 2.744 1.259 1.00 1.70 \ ATOM 58 SG CYS D 7 2.238 2.426 0.519 1.00 1.70 \ ATOM 59 N GLY D 8 -2.007 1.548 2.293 1.00 0.71 \ ATOM 60 CA GLY D 8 -3.122 1.757 3.195 1.00 0.71 \ ATOM 61 C GLY D 8 -4.458 1.697 2.544 1.00 0.71 \ ATOM 62 O GLY D 8 -4.724 0.846 1.719 1.00 0.71 \ ATOM 63 N SER D 9 -5.351 2.622 2.942 1.00 -0.48 \ ATOM 64 CA SER D 9 -6.680 2.707 2.282 1.00 -0.48 \ ATOM 65 C SER D 9 -6.601 2.887 0.747 1.00 -0.48 \ ATOM 66 O SER D 9 -7.513 2.471 0.014 1.00 -0.48 \ ATOM 67 CB SER D 9 -7.526 3.871 2.844 1.00 -0.48 \ ATOM 68 OG SER D 9 -6.901 5.110 2.676 1.00 -0.48 \ ATOM 69 N HIS D 10 -5.498 3.417 0.270 1.00 -0.23 \ ATOM 70 CA HIS D 10 -5.370 3.634 -1.166 1.00 -0.23 \ ATOM 71 C HIS D 10 -5.258 2.339 -1.916 1.00 -0.23 \ ATOM 72 O HIS D 10 -5.697 2.229 -3.014 1.00 -0.23 \ ATOM 73 CB HIS D 10 -4.186 4.530 -1.503 1.00 -0.23 \ ATOM 74 CG HIS D 10 -4.196 5.790 -0.739 1.00 -0.23 \ ATOM 75 ND1 HIS D 10 -5.041 6.822 -1.033 1.00 -0.23 \ ATOM 76 CD2 HIS D 10 -3.523 6.165 0.365 1.00 -0.23 \ ATOM 77 CE1 HIS D 10 -4.855 7.797 -0.181 1.00 -0.23 \ ATOM 78 NE2 HIS D 10 -3.946 7.429 0.682 1.00 -0.23 \ ATOM 79 N LEU D 11 -4.700 1.360 -1.241 1.00 1.70 \ ATOM 80 CA LEU D 11 -4.536 0.029 -1.818 1.00 1.70 \ ATOM 81 C LEU D 11 -5.883 -0.685 -1.960 1.00 1.70 \ ATOM 82 O LEU D 11 -6.241 -1.321 -2.956 1.00 1.70 \ ATOM 83 CB LEU D 11 -3.505 -0.725 -1.000 1.00 1.70 \ ATOM 84 CG LEU D 11 -2.972 -2.016 -1.531 1.00 1.70 \ ATOM 85 CD1 LEU D 11 -2.564 -1.994 -3.004 1.00 1.70 \ ATOM 86 CD2 LEU D 11 -1.849 -2.444 -0.587 1.00 1.70 \ ATOM 87 N VAL D 12 -6.735 -0.558 -0.930 1.00 0.71 \ ATOM 88 CA VAL D 12 -8.069 -1.075 -0.989 1.00 0.71 \ ATOM 89 C VAL D 12 -8.943 -0.388 -2.049 1.00 0.71 \ ATOM 90 O VAL D 12 -9.752 -1.038 -2.742 1.00 0.71 \ ATOM 91 CB VAL D 12 -8.730 -0.997 0.409 1.00 0.71 \ ATOM 92 CG1 VAL D 12 -10.163 -1.341 0.248 1.00 0.71 \ ATOM 93 CG2 VAL D 12 -8.066 -2.020 1.278 1.00 0.71 \ ATOM 94 N GLU D 13 -8.833 0.913 -2.185 1.00 0.65 \ ATOM 95 CA GLU D 13 -9.550 1.645 -3.205 1.00 0.65 \ ATOM 96 C GLU D 13 -9.108 1.166 -4.615 1.00 0.65 \ ATOM 97 O GLU D 13 -9.906 1.075 -5.557 1.00 0.65 \ ATOM 98 CB GLU D 13 -9.408 3.155 -3.020 1.00 0.65 \ ATOM 99 CG GLU D 13 -10.109 3.649 -1.766 1.00 0.65 \ ATOM 100 N ALA D 14 -7.811 0.939 -4.760 1.00 -0.00 \ ATOM 101 CA ALA D 14 -7.301 0.413 -6.044 1.00 -0.00 \ ATOM 102 C ALA D 14 -7.879 -0.927 -6.403 1.00 -0.00 \ ATOM 103 O ALA D 14 -8.273 -1.160 -7.546 1.00 -0.00 \ ATOM 104 CB ALA D 14 -5.810 0.356 -6.009 1.00 -0.00 \ ATOM 105 N LEU D 15 -7.955 -1.862 -5.471 1.00 1.70 \ ATOM 106 CA LEU D 15 -8.617 -3.140 -5.743 1.00 1.70 \ ATOM 107 C LEU D 15 -10.107 -3.001 -6.022 1.00 1.70 \ ATOM 108 O LEU D 15 -10.610 -3.651 -6.896 1.00 1.70 \ ATOM 109 CB LEU D 15 -8.475 -4.094 -4.517 1.00 1.70 \ ATOM 110 CG LEU D 15 -7.099 -4.643 -4.308 1.00 1.70 \ ATOM 111 CD1 LEU D 15 -7.012 -5.356 -2.955 1.00 1.70 \ ATOM 112 CD2 LEU D 15 -6.679 -5.587 -5.423 1.00 1.70 \ ATOM 113 N TYR D 16 -10.791 -2.129 -5.305 1.00 -0.22 \ ATOM 114 CA TYR D 16 -12.164 -1.917 -5.581 1.00 -0.22 \ ATOM 115 C TYR D 16 -12.375 -1.538 -7.057 1.00 -0.22 \ ATOM 116 O TYR D 16 -13.238 -1.991 -7.705 1.00 -0.22 \ ATOM 117 CB TYR D 16 -12.697 -0.816 -4.618 1.00 -0.22 \ ATOM 118 CG TYR D 16 -14.171 -0.406 -4.774 1.00 -0.22 \ ATOM 119 CD1 TYR D 16 -14.555 0.580 -5.631 1.00 -0.22 \ ATOM 120 CD2 TYR D 16 -15.147 -1.003 -4.049 1.00 -0.22 \ ATOM 121 CE1 TYR D 16 -15.860 0.951 -5.792 1.00 -0.22 \ ATOM 122 CE2 TYR D 16 -16.466 -0.643 -4.187 1.00 -0.22 \ ATOM 123 CZ TYR D 16 -16.831 0.342 -5.074 1.00 -0.22 \ ATOM 124 OH TYR D 16 -18.140 0.715 -5.206 1.00 -0.22 \ ATOM 125 N LEU D 17 -11.521 -0.675 -7.512 1.00 -0.23 \ ATOM 126 CA LEU D 17 -11.574 -0.206 -8.858 1.00 -0.23 \ ATOM 127 C LEU D 17 -11.205 -1.259 -9.908 1.00 -0.23 \ ATOM 128 O LEU D 17 -11.981 -1.527 -10.820 1.00 -0.23 \ ATOM 129 CB LEU D 17 -10.633 0.999 -9.040 1.00 -0.23 \ ATOM 130 CG LEU D 17 -10.474 1.585 -10.480 1.00 -0.23 \ ATOM 131 CD1 LEU D 17 -11.802 2.075 -11.042 1.00 -0.23 \ ATOM 132 CD2 LEU D 17 -9.473 2.710 -10.449 1.00 -0.23 \ ATOM 133 N VAL D 18 -10.029 -1.853 -9.770 1.00 0.28 \ ATOM 134 CA VAL D 18 -9.576 -2.737 -10.806 1.00 0.28 \ ATOM 135 C VAL D 18 -10.263 -4.067 -10.837 1.00 0.28 \ ATOM 136 O VAL D 18 -10.327 -4.734 -11.865 1.00 0.28 \ ATOM 137 CB VAL D 18 -8.026 -2.868 -10.874 1.00 0.28 \ ATOM 138 CG1 VAL D 18 -7.352 -1.507 -10.976 1.00 0.28 \ ATOM 139 CG2 VAL D 18 -7.448 -3.653 -9.790 1.00 0.28 \ ATOM 140 N CYS D 19 -10.724 -4.533 -9.688 1.00 1.70 \ ATOM 141 CA CYS D 19 -11.375 -5.820 -9.602 1.00 1.70 \ ATOM 142 C CYS D 19 -12.816 -5.804 -10.027 1.00 1.70 \ ATOM 143 O CYS D 19 -13.307 -6.765 -10.574 1.00 1.70 \ ATOM 144 CB CYS D 19 -11.220 -6.479 -8.231 1.00 1.70 \ ATOM 145 SG CYS D 19 -9.501 -6.703 -7.712 1.00 1.70 \ ATOM 146 N GLY D 20 -13.474 -4.705 -9.716 1.00 -0.16 \ ATOM 147 CA GLY D 20 -14.887 -4.555 -9.947 1.00 -0.16 \ ATOM 148 C GLY D 20 -15.651 -5.767 -9.467 1.00 -0.16 \ ATOM 149 O GLY D 20 -15.352 -6.310 -8.396 1.00 -0.16 \ ATOM 150 N GLU D 21 -16.531 -6.296 -10.325 1.00 0.19 \ ATOM 151 CA GLU D 21 -17.374 -7.440 -9.941 1.00 0.19 \ ATOM 152 C GLU D 21 -16.664 -8.745 -9.748 1.00 0.19 \ ATOM 153 O GLU D 21 -17.278 -9.737 -9.259 1.00 0.19 \ ATOM 154 CB GLU D 21 -18.535 -7.615 -10.972 1.00 0.19 \ ATOM 155 CG GLU D 21 -19.477 -6.426 -10.991 1.00 0.19 \ ATOM 156 CD GLU D 21 -20.462 -6.507 -12.179 1.00 0.19 \ ATOM 157 OE1 GLU D 21 -20.381 -7.469 -13.021 1.00 0.19 \ ATOM 158 OE2 GLU D 21 -21.312 -5.574 -12.294 1.00 0.19 \ ATOM 159 N ARG D 22 -15.369 -8.846 -10.100 1.00 -0.61 \ ATOM 160 CA ARG D 22 -14.556 -10.047 -9.740 1.00 -0.61 \ ATOM 161 C ARG D 22 -14.434 -10.204 -8.242 1.00 -0.61 \ ATOM 162 O ARG D 22 -14.257 -11.343 -7.777 1.00 -0.61 \ ATOM 163 CB ARG D 22 -13.162 -10.002 -10.349 1.00 -0.61 \ ATOM 164 CG ARG D 22 -13.152 -9.992 -11.858 1.00 -0.61 \ ATOM 165 CD ARG D 22 -11.759 -9.761 -12.400 1.00 -0.61 \ ATOM 166 NE ARG D 22 -11.843 -9.548 -13.852 1.00 -0.61 \ ATOM 167 CZ ARG D 22 -11.450 -10.405 -14.793 1.00 -0.61 \ ATOM 168 NH1 ARG D 22 -10.828 -11.538 -14.477 1.00 -0.61 \ ATOM 169 NH2 ARG D 22 -11.617 -10.074 -16.072 1.00 -0.61 \ ATOM 170 N GLY D 23 -14.408 -9.084 -7.539 1.00 1.70 \ ATOM 171 CA GLY D 23 -14.199 -9.136 -6.081 1.00 1.70 \ ATOM 172 C GLY D 23 -12.758 -9.485 -5.758 1.00 1.70 \ ATOM 173 O GLY D 23 -11.909 -9.634 -6.641 1.00 1.70 \ ATOM 174 N PHE D 24 -12.452 -9.495 -4.468 1.00 1.13 \ ATOM 175 CA PHE D 24 -11.076 -9.664 -4.028 1.00 1.13 \ ATOM 176 C PHE D 24 -10.969 -9.995 -2.561 1.00 1.13 \ ATOM 177 O PHE D 24 -11.740 -9.553 -1.824 1.00 1.13 \ ATOM 178 CB PHE D 24 -10.222 -8.381 -4.208 1.00 1.13 \ ATOM 179 CG PHE D 24 -10.809 -7.131 -3.569 1.00 1.13 \ ATOM 180 CD1 PHE D 24 -11.680 -6.346 -4.257 1.00 1.13 \ ATOM 181 CD2 PHE D 24 -10.427 -6.711 -2.327 1.00 1.13 \ ATOM 182 CE1 PHE D 24 -12.226 -5.239 -3.709 1.00 1.13 \ ATOM 183 CE2 PHE D 24 -10.974 -5.574 -1.782 1.00 1.13 \ ATOM 184 CZ PHE D 24 -11.874 -4.840 -2.493 1.00 1.13 \ ATOM 185 N PHE D 25 -9.917 -10.708 -2.186 1.00 0.52 \ ATOM 186 CA PHE D 25 -9.457 -10.767 -0.828 1.00 0.52 \ ATOM 187 C PHE D 25 -8.437 -9.654 -0.590 1.00 0.52 \ ATOM 188 O PHE D 25 -7.564 -9.495 -1.360 1.00 0.52 \ ATOM 189 CB PHE D 25 -8.729 -12.104 -0.518 1.00 0.52 \ ATOM 190 CG PHE D 25 -9.613 -13.317 -0.460 1.00 0.52 \ ATOM 191 CD1 PHE D 25 -9.862 -14.087 -1.565 1.00 0.52 \ ATOM 192 CD2 PHE D 25 -10.140 -13.700 0.722 1.00 0.52 \ ATOM 193 CE1 PHE D 25 -10.679 -15.177 -1.522 1.00 0.52 \ ATOM 194 CE2 PHE D 25 -10.975 -14.787 0.786 1.00 0.52 \ ATOM 195 CZ PHE D 25 -11.248 -15.521 -0.327 1.00 0.52 \ ATOM 196 N PHE D 26 -8.598 -8.966 0.516 1.00 -0.27 \ ATOM 197 CA PHE D 26 -7.595 -8.047 1.004 1.00 -0.27 \ ATOM 198 C PHE D 26 -6.974 -8.569 2.273 1.00 -0.27 \ ATOM 199 O PHE D 26 -7.642 -8.738 3.251 1.00 -0.27 \ ATOM 200 CB PHE D 26 -8.142 -6.652 1.268 1.00 -0.27 \ ATOM 201 CG PHE D 26 -7.087 -5.683 1.748 1.00 -0.27 \ ATOM 202 CD1 PHE D 26 -6.066 -5.274 0.907 1.00 -0.27 \ ATOM 203 CD2 PHE D 26 -7.068 -5.246 3.017 1.00 -0.27 \ ATOM 204 CE1 PHE D 26 -5.093 -4.431 1.346 1.00 -0.27 \ ATOM 205 CE2 PHE D 26 -6.087 -4.410 3.466 1.00 -0.27 \ ATOM 206 CZ PHE D 26 -5.089 -3.999 2.609 1.00 -0.27 \ ATOM 207 N THR D 27 -5.651 -8.778 2.162 1.00 -0.98 \ ATOM 208 CA THR D 27 -4.884 -9.435 3.129 1.00 -0.98 \ ATOM 209 C THR D 27 -3.647 -8.570 3.368 1.00 -0.98 \ ATOM 210 O THR D 27 -2.683 -8.646 2.574 1.00 -0.98 \ ATOM 211 CB THR D 27 -4.489 -10.833 2.646 1.00 -0.98 \ ATOM 212 OG1 THR D 27 -5.698 -11.653 2.399 1.00 -0.98 \ ATOM 213 CG2 THR D 27 -3.596 -11.526 3.704 1.00 -0.98 \ ATOM 214 N PRO D 28 -3.758 -7.679 4.352 1.00 -0.78 \ ATOM 215 CA PRO D 28 -2.628 -6.861 4.728 1.00 -0.78 \ ATOM 216 C PRO D 28 -1.561 -7.601 5.587 1.00 -0.78 \ ATOM 217 O PRO D 28 -1.639 -8.803 5.800 1.00 -0.78 \ ATOM 218 CB PRO D 28 -3.274 -5.761 5.500 1.00 -0.78 \ ATOM 219 CG PRO D 28 -4.415 -6.477 6.262 1.00 -0.78 \ ATOM 220 CD PRO D 28 -4.918 -7.458 5.252 1.00 -0.78 \ ATOM 221 N LYS D 29 -0.612 -6.793 6.012 1.00 -0.90 \ ATOM 222 CA LYS D 29 0.090 -6.802 7.284 1.00 -0.90 \ ATOM 223 C LYS D 29 1.608 -6.811 7.263 1.00 -0.90 \ ATOM 224 O LYS D 29 2.232 -6.239 6.305 1.00 -0.90 \ ATOM 225 CB LYS D 29 -0.636 -7.600 8.409 1.00 -0.90 \ ATOM 226 CG LYS D 29 0.082 -8.869 8.823 1.00 -0.90 \ ATOM 227 CD LYS D 29 -0.670 -9.453 10.011 1.00 -0.90 \ ATOM 228 CE LYS D 29 -0.503 -10.961 10.195 1.00 -0.90 \ ATOM 229 NZ LYS D 29 0.920 -11.232 10.566 1.00 -0.90 \ """, "e4uneD1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e4uneD1_csv", state=0, origin=1) cmd.zoom("e4uneD1_csv", animate=-1)