cmd.read_pdbstr("""\ ATOM 1 N GLY F 5 17.963 -49.560 24.361 1.00 -0.52 \ ATOM 2 CA GLY F 5 18.124 -50.339 25.576 1.00 -0.52 \ ATOM 3 C GLY F 5 19.569 -50.390 26.034 1.00 -0.52 \ ATOM 4 O GLY F 5 20.434 -50.876 25.305 1.00 -0.52 \ ATOM 5 N ILE F 6 19.841 -49.898 27.241 1.00 -0.36 \ ATOM 6 CA ILE F 6 18.813 -49.362 28.131 1.00 -0.36 \ ATOM 7 C ILE F 6 18.468 -47.907 27.801 1.00 -0.36 \ ATOM 8 O ILE F 6 19.339 -47.036 27.767 1.00 -0.36 \ ATOM 9 CB ILE F 6 19.253 -49.472 29.612 1.00 -0.36 \ ATOM 10 CG1 ILE F 6 18.366 -48.610 30.515 1.00 -0.36 \ ATOM 11 CG2 ILE F 6 20.719 -49.095 29.769 1.00 -0.36 \ ATOM 12 CD1 ILE F 6 16.999 -49.204 30.778 1.00 -0.36 \ ATOM 13 N LYS F 7 17.187 -47.663 27.544 1.00 -0.40 \ ATOM 14 CA LYS F 7 16.700 -46.333 27.199 1.00 -0.40 \ ATOM 15 C LYS F 7 15.553 -45.913 28.107 1.00 -0.40 \ ATOM 16 O LYS F 7 14.386 -46.111 27.769 1.00 -0.40 \ ATOM 17 CB LYS F 7 16.236 -46.288 25.741 1.00 -0.40 \ ATOM 18 CG LYS F 7 17.347 -46.361 24.709 1.00 -0.40 \ ATOM 19 CD LYS F 7 16.764 -46.530 23.313 1.00 -0.40 \ ATOM 20 CE LYS F 7 17.852 -46.597 22.255 1.00 -0.40 \ ATOM 21 NZ LYS F 7 17.294 -46.953 20.921 1.00 -0.40 \ ATOM 22 N TRP F 8 15.878 -45.332 29.257 1.00 2.10 \ ATOM 23 CA TRP F 8 14.840 -44.874 30.171 1.00 2.10 \ ATOM 24 C TRP F 8 14.211 -43.583 29.648 1.00 2.10 \ ATOM 25 O TRP F 8 14.909 -42.624 29.319 1.00 2.10 \ ATOM 26 CB TRP F 8 15.399 -44.681 31.587 1.00 2.10 \ ATOM 27 CG TRP F 8 16.283 -43.477 31.766 1.00 2.10 \ ATOM 28 CD1 TRP F 8 17.637 -43.418 31.598 1.00 2.10 \ ATOM 29 CD2 TRP F 8 15.870 -42.162 32.164 1.00 2.10 \ ATOM 30 NE1 TRP F 8 18.091 -42.147 31.861 1.00 2.10 \ ATOM 31 CE2 TRP F 8 17.029 -41.359 32.209 1.00 2.10 \ ATOM 32 CE3 TRP F 8 14.636 -41.588 32.480 1.00 2.10 \ ATOM 33 CZ2 TRP F 8 16.983 -40.010 32.562 1.00 2.10 \ ATOM 34 CZ3 TRP F 8 14.596 -40.249 32.828 1.00 2.10 \ ATOM 35 CH2 TRP F 8 15.761 -39.475 32.865 1.00 2.10 \ ATOM 36 N ALA F 9 12.886 -43.578 29.553 1.00 -0.81 \ ATOM 37 CA ALA F 9 12.157 -42.414 29.066 1.00 -0.81 \ ATOM 38 C ALA F 9 11.439 -41.712 30.210 1.00 -0.81 \ ATOM 39 O ALA F 9 10.963 -42.360 31.143 1.00 -0.81 \ ATOM 40 CB ALA F 9 11.166 -42.820 27.987 1.00 -0.81 \ ATOM 41 N CYS F 10 11.364 -40.388 30.139 1.00 1.82 \ ATOM 42 CA CYS F 10 10.676 -39.619 31.168 1.00 1.82 \ ATOM 43 C CYS F 10 9.161 -39.734 31.026 1.00 1.82 \ ATOM 44 O CYS F 10 8.655 -40.201 30.006 1.00 1.82 \ ATOM 45 CB CYS F 10 11.096 -38.150 31.119 1.00 1.82 \ ATOM 46 SG CYS F 10 10.169 -37.101 32.261 1.00 1.82 \ ATOM 47 N GLU F 11 8.444 -39.304 32.059 1.00 -0.49 \ ATOM 48 CA GLU F 11 6.989 -39.398 32.073 1.00 -0.49 \ ATOM 49 C GLU F 11 6.326 -38.168 31.459 1.00 -0.49 \ ATOM 50 O GLU F 11 5.251 -38.266 30.870 1.00 -0.49 \ ATOM 51 CB GLU F 11 6.484 -39.598 33.504 1.00 -0.49 \ ATOM 52 N TYR F 12 6.968 -37.013 31.600 1.00 -0.77 \ ATOM 53 CA TYR F 12 6.396 -35.759 31.116 1.00 -0.77 \ ATOM 54 C TYR F 12 6.627 -35.594 29.617 1.00 -0.77 \ ATOM 55 O TYR F 12 5.676 -35.411 28.853 1.00 -0.77 \ ATOM 56 CB TYR F 12 6.977 -34.576 31.883 1.00 -0.77 \ ATOM 57 CG TYR F 12 6.562 -34.565 33.341 1.00 -0.77 \ ATOM 58 CD1 TYR F 12 5.351 -34.014 33.730 1.00 -0.77 \ ATOM 59 CD2 TYR F 12 7.375 -35.116 34.323 1.00 -0.77 \ ATOM 60 CE1 TYR F 12 4.958 -34.004 35.053 1.00 -0.77 \ ATOM 61 CE2 TYR F 12 6.995 -35.113 35.654 1.00 -0.77 \ ATOM 62 CZ TYR F 12 5.783 -34.554 36.014 1.00 -0.77 \ ATOM 63 OH TYR F 12 5.394 -34.545 37.333 1.00 -0.77 \ ATOM 64 N CYS F 13 7.889 -35.655 29.198 1.00 2.10 \ ATOM 65 CA CYS F 13 8.221 -35.778 27.781 1.00 2.10 \ ATOM 66 C CYS F 13 8.870 -37.137 27.555 1.00 2.10 \ ATOM 67 O CYS F 13 9.603 -37.634 28.410 1.00 2.10 \ ATOM 68 CB CYS F 13 9.144 -34.651 27.326 1.00 2.10 \ ATOM 69 SG CYS F 13 10.800 -34.696 28.035 1.00 2.10 \ ATOM 70 N THR F 14 8.607 -37.733 26.400 1.00 -0.29 \ ATOM 71 CA THR F 14 9.014 -39.110 26.158 1.00 -0.29 \ ATOM 72 C THR F 14 10.470 -39.239 25.711 1.00 -0.29 \ ATOM 73 O THR F 14 10.895 -40.310 25.273 1.00 -0.29 \ ATOM 74 CB THR F 14 8.123 -39.779 25.089 1.00 -0.29 \ ATOM 75 OG1 THR F 14 8.457 -41.170 24.977 1.00 -0.29 \ ATOM 76 CG2 THR F 14 8.300 -39.108 23.743 1.00 -0.29 \ ATOM 77 N TYR F 15 11.241 -38.161 25.830 1.00 -0.14 \ ATOM 78 CA TYR F 15 12.646 -38.189 25.422 1.00 -0.14 \ ATOM 79 C TYR F 15 13.428 -39.213 26.241 1.00 -0.14 \ ATOM 80 O TYR F 15 13.417 -39.187 27.474 1.00 -0.14 \ ATOM 81 CB TYR F 15 13.296 -36.813 25.564 1.00 -0.14 \ ATOM 82 CG TYR F 15 14.747 -36.789 25.128 1.00 -0.14 \ ATOM 83 CD1 TYR F 15 15.084 -36.745 23.782 1.00 -0.14 \ ATOM 84 CD2 TYR F 15 15.775 -36.814 26.063 1.00 -0.14 \ ATOM 85 CE1 TYR F 15 16.401 -36.725 23.377 1.00 -0.14 \ ATOM 86 CE2 TYR F 15 17.099 -36.791 25.670 1.00 -0.14 \ ATOM 87 CZ TYR F 15 17.405 -36.751 24.325 1.00 -0.14 \ ATOM 88 OH TYR F 15 18.716 -36.731 23.918 1.00 -0.14 \ ATOM 89 N GLU F 16 14.113 -40.111 25.543 1.00 -0.72 \ ATOM 90 CA GLU F 16 14.805 -41.222 26.180 1.00 -0.72 \ ATOM 91 C GLU F 16 16.287 -40.923 26.374 1.00 -0.72 \ ATOM 92 O GLU F 16 17.040 -40.791 25.409 1.00 -0.72 \ ATOM 93 CB GLU F 16 14.615 -42.494 25.350 1.00 -0.72 \ ATOM 94 CG GLU F 16 13.163 -42.759 24.983 1.00 -0.72 \ ATOM 95 CD GLU F 16 12.978 -44.052 24.220 1.00 -0.72 \ ATOM 96 OE1 GLU F 16 13.997 -44.668 23.843 1.00 -0.72 \ ATOM 97 OE2 GLU F 16 11.816 -44.455 23.999 1.00 -0.72 \ ATOM 98 N ASN F 17 16.695 -40.811 27.634 1.00 2.10 \ ATOM 99 CA ASN F 17 18.078 -40.504 27.974 1.00 2.10 \ ATOM 100 C ASN F 17 18.922 -41.758 28.169 1.00 2.10 \ ATOM 101 O ASN F 17 18.404 -42.875 28.197 1.00 2.10 \ ATOM 102 CB ASN F 17 18.141 -39.654 29.246 1.00 2.10 \ ATOM 103 CG ASN F 17 17.322 -38.380 29.144 1.00 2.10 \ ATOM 104 OD1 ASN F 17 17.857 -37.305 28.873 1.00 2.10 \ ATOM 105 ND2 ASN F 17 16.020 -38.492 29.373 1.00 2.10 \ ATOM 106 N TRP F 18 20.229 -41.560 28.307 1.00 -0.47 \ ATOM 107 CA TRP F 18 21.144 -42.640 28.650 1.00 -0.47 \ ATOM 108 C TRP F 18 21.015 -42.967 30.135 1.00 -0.47 \ ATOM 109 O TRP F 18 20.547 -42.134 30.913 1.00 -0.47 \ ATOM 110 CB TRP F 18 22.584 -42.250 28.305 1.00 -0.47 \ ATOM 111 CG TRP F 18 22.801 -41.997 26.848 1.00 -0.47 \ ATOM 112 CD1 TRP F 18 22.601 -40.825 26.183 1.00 -0.47 \ ATOM 113 CD2 TRP F 18 23.259 -42.940 25.872 1.00 -0.47 \ ATOM 114 NE1 TRP F 18 22.906 -40.978 24.852 1.00 -0.47 \ ATOM 115 CE2 TRP F 18 23.314 -42.269 24.635 1.00 -0.47 \ ATOM 116 CE3 TRP F 18 23.630 -44.287 25.924 1.00 -0.47 \ ATOM 117 CZ2 TRP F 18 23.723 -42.897 23.461 1.00 -0.47 \ ATOM 118 CZ3 TRP F 18 24.036 -44.909 24.758 1.00 -0.47 \ ATOM 119 CH2 TRP F 18 24.079 -44.215 23.544 1.00 -0.47 \ ATOM 120 N PRO F 19 21.425 -44.181 30.540 1.00 0.06 \ ATOM 121 CA PRO F 19 21.378 -44.522 31.966 1.00 0.06 \ ATOM 122 C PRO F 19 22.354 -43.690 32.794 1.00 0.06 \ ATOM 123 O PRO F 19 22.240 -43.642 34.019 1.00 0.06 \ ATOM 124 CB PRO F 19 21.770 -46.003 31.986 1.00 0.06 \ ATOM 125 CG PRO F 19 22.569 -46.193 30.740 1.00 0.06 \ ATOM 126 CD PRO F 19 21.910 -45.308 29.725 1.00 0.06 \ ATOM 127 N SER F 20 23.299 -43.041 32.121 1.00 -0.39 \ ATOM 128 CA SER F 20 24.315 -42.241 32.792 1.00 -0.39 \ ATOM 129 C SER F 20 23.786 -40.863 33.184 1.00 -0.39 \ ATOM 130 O SER F 20 24.399 -40.163 33.990 1.00 -0.39 \ ATOM 131 CB SER F 20 25.547 -42.095 31.896 1.00 -0.39 \ ATOM 132 OG SER F 20 26.093 -43.361 31.571 1.00 -0.39 \ ATOM 133 N ALA F 21 22.648 -40.481 32.614 1.00 -0.31 \ ATOM 134 CA ALA F 21 22.053 -39.178 32.894 1.00 -0.31 \ ATOM 135 C ALA F 21 21.130 -39.237 34.107 1.00 -0.31 \ ATOM 136 O ALA F 21 20.085 -39.887 34.073 1.00 -0.31 \ ATOM 137 CB ALA F 21 21.294 -38.669 31.677 1.00 -0.31 \ ATOM 138 N ILE F 22 21.521 -38.550 35.176 1.00 -0.85 \ ATOM 139 CA ILE F 22 20.732 -38.523 36.402 1.00 -0.85 \ ATOM 140 C ILE F 22 19.498 -37.641 36.239 1.00 -0.85 \ ATOM 141 O ILE F 22 18.545 -37.737 37.013 1.00 -0.85 \ ATOM 142 CB ILE F 22 21.563 -38.022 37.600 1.00 -0.85 \ ATOM 143 CG1 ILE F 22 21.974 -36.561 37.398 1.00 -0.85 \ ATOM 144 CG2 ILE F 22 22.790 -38.900 37.801 1.00 -0.85 \ ATOM 145 CD1 ILE F 22 22.740 -35.975 38.564 1.00 -0.85 \ ATOM 146 N LYS F 23 19.523 -36.782 35.225 1.00 -0.39 \ ATOM 147 CA LYS F 23 18.398 -35.906 34.932 1.00 -0.39 \ ATOM 148 C LYS F 23 18.168 -35.817 33.430 1.00 -0.39 \ ATOM 149 O LYS F 23 19.105 -35.965 32.644 1.00 -0.39 \ ATOM 150 CB LYS F 23 18.633 -34.511 35.515 1.00 -0.39 \ ATOM 151 N CYS F 24 16.920 -35.578 33.037 1.00 2.10 \ ATOM 152 CA CYS F 24 16.586 -35.427 31.628 1.00 2.10 \ ATOM 153 C CYS F 24 17.246 -34.175 31.070 1.00 2.10 \ ATOM 154 O CYS F 24 17.474 -33.200 31.789 1.00 2.10 \ ATOM 155 CB CYS F 24 15.073 -35.363 31.423 1.00 2.10 \ ATOM 156 SG CYS F 24 14.578 -35.058 29.707 1.00 2.10 \ ATOM 157 N THR F 25 17.555 -34.216 29.782 1.00 -0.45 \ ATOM 158 CA THR F 25 18.235 -33.118 29.116 1.00 -0.45 \ ATOM 159 C THR F 25 17.326 -31.908 28.975 1.00 -0.45 \ ATOM 160 O THR F 25 17.770 -30.770 29.120 1.00 -0.45 \ ATOM 161 CB THR F 25 18.718 -33.522 27.715 1.00 -0.45 \ ATOM 162 OG1 THR F 25 17.593 -33.740 26.846 1.00 -0.45 \ ATOM 163 CG2 THR F 25 19.520 -34.813 27.799 1.00 -0.45 \ ATOM 164 N MET F 26 16.045 -32.150 28.710 1.00 -0.18 \ ATOM 165 CA MET F 26 15.138 -31.064 28.348 1.00 -0.18 \ ATOM 166 C MET F 26 14.133 -30.730 29.454 1.00 -0.18 \ ATOM 167 O MET F 26 14.068 -29.587 29.903 1.00 -0.18 \ ATOM 168 CB MET F 26 14.421 -31.422 27.046 1.00 -0.18 \ ATOM 169 CG MET F 26 15.398 -31.729 25.905 1.00 -0.18 \ ATOM 170 SD MET F 26 14.697 -32.729 24.580 1.00 -0.18 \ ATOM 171 CE MET F 26 13.270 -31.734 24.184 1.00 -0.18 \ ATOM 172 N CYS F 27 13.356 -31.713 29.900 1.00 2.10 \ ATOM 173 CA CYS F 27 12.375 -31.458 30.954 1.00 2.10 \ ATOM 174 C CYS F 27 13.019 -31.494 32.341 1.00 2.10 \ ATOM 175 O CYS F 27 12.358 -31.230 33.346 1.00 2.10 \ ATOM 176 CB CYS F 27 11.227 -32.464 30.884 1.00 2.10 \ ATOM 177 SG CYS F 27 11.650 -34.088 31.525 1.00 2.10 \ ATOM 178 N ARG F 28 14.305 -31.838 32.381 1.00 -0.72 \ ATOM 179 CA ARG F 28 15.115 -31.792 33.601 1.00 -0.72 \ ATOM 180 C ARG F 28 14.589 -32.672 34.739 1.00 -0.72 \ ATOM 181 O ARG F 28 14.907 -32.441 35.906 1.00 -0.72 \ ATOM 182 CB ARG F 28 15.240 -30.347 34.091 1.00 -0.72 \ ATOM 183 CG ARG F 28 15.692 -29.366 33.021 1.00 -0.72 \ ATOM 184 CD ARG F 28 17.076 -29.709 32.496 1.00 -0.72 \ ATOM 185 NE ARG F 28 17.534 -28.740 31.503 1.00 -0.72 \ ATOM 186 CZ ARG F 28 18.182 -27.617 31.798 1.00 -0.72 \ ATOM 187 NH1 ARG F 28 18.451 -27.317 33.062 1.00 -0.72 \ ATOM 188 NH2 ARG F 28 18.560 -26.793 30.830 1.00 -0.72 \ ATOM 189 N ALA F 29 13.793 -33.682 34.401 1.00 -0.61 \ ATOM 190 CA ALA F 29 13.286 -34.612 35.403 1.00 -0.61 \ ATOM 191 C ALA F 29 14.348 -35.647 35.754 1.00 -0.61 \ ATOM 192 O ALA F 29 15.117 -36.073 34.893 1.00 -0.61 \ ATOM 193 CB ALA F 29 12.020 -35.292 34.910 1.00 -0.61 \ ATOM 194 N GLN F 30 14.386 -36.047 37.020 1.00 -0.40 \ ATOM 195 CA GLN F 30 15.400 -36.981 37.497 1.00 -0.40 \ ATOM 196 C GLN F 30 15.095 -38.415 37.070 1.00 -0.40 \ ATOM 197 O GLN F 30 14.012 -38.706 36.562 1.00 -0.40 \ ATOM 198 CB GLN F 30 15.525 -36.896 39.021 1.00 -0.40 \ ATOM 199 CG GLN F 30 14.233 -37.169 39.774 1.00 -0.40 \ ATOM 200 CD GLN F 30 14.374 -36.943 41.268 1.00 -0.40 \ ATOM 201 OE1 GLN F 30 15.296 -36.264 41.721 1.00 -0.40 \ ATOM 202 NE2 GLN F 30 13.458 -37.514 42.041 1.00 -0.40 \ ATOM 203 N ARG F 31 16.064 -39.304 37.273 1.00 1.00 \ ATOM 204 CA ARG F 31 15.920 -40.711 36.902 1.00 1.00 \ ATOM 205 C ARG F 31 14.812 -41.443 37.676 1.00 1.00 \ ATOM 206 O ARG F 31 13.937 -42.048 37.057 1.00 1.00 \ ATOM 207 CB ARG F 31 17.258 -41.444 37.077 1.00 1.00 \ ATOM 208 CG ARG F 31 17.139 -42.961 37.178 1.00 1.00 \ ATOM 209 CD ARG F 31 16.768 -43.592 35.846 1.00 1.00 \ ATOM 210 NE ARG F 31 17.852 -43.492 34.875 1.00 1.00 \ ATOM 211 N PRO F 32 14.834 -41.399 39.025 1.00 -0.40 \ ATOM 212 CA PRO F 32 13.796 -42.180 39.705 1.00 -0.40 \ ATOM 213 C PRO F 32 12.448 -41.464 39.749 1.00 -0.40 \ ATOM 214 O PRO F 32 12.184 -40.610 38.902 1.00 -0.40 \ ATOM 215 CB PRO F 32 14.365 -42.351 41.113 1.00 -0.40 \ ATOM 216 CG PRO F 32 15.135 -41.101 41.335 1.00 -0.40 \ ATOM 217 CD PRO F 32 15.719 -40.720 39.994 1.00 -0.40 \ """, "e5af6F1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5af6F1_csv", state=0, origin=1) cmd.zoom("e5af6F1_csv", animate=-1)