cmd.read_pdbstr("""\ ATOM 1 N ILE H 6 23.811 -26.970 2.240 1.00 -0.36 \ ATOM 2 CA ILE H 6 23.474 -26.317 0.980 1.00 -0.36 \ ATOM 3 C ILE H 6 22.068 -25.718 1.015 1.00 -0.36 \ ATOM 4 O ILE H 6 21.227 -26.029 0.169 1.00 -0.36 \ ATOM 5 CB ILE H 6 23.585 -27.297 -0.208 1.00 -0.36 \ ATOM 6 CG1 ILE H 6 22.962 -28.647 0.152 1.00 -0.36 \ ATOM 7 CG2 ILE H 6 25.039 -27.495 -0.600 1.00 -0.36 \ ATOM 8 CD1 ILE H 6 23.066 -29.683 -0.946 1.00 -0.36 \ ATOM 9 N LYS H 7 21.821 -24.852 1.994 1.00 -0.40 \ ATOM 10 CA LYS H 7 20.518 -24.212 2.143 1.00 -0.40 \ ATOM 11 C LYS H 7 20.202 -23.288 0.972 1.00 -0.40 \ ATOM 12 O LYS H 7 21.054 -22.521 0.527 1.00 -0.40 \ ATOM 13 CB LYS H 7 20.449 -23.423 3.452 1.00 -0.40 \ ATOM 14 CG LYS H 7 20.376 -24.282 4.701 1.00 -0.40 \ ATOM 15 CD LYS H 7 20.030 -23.445 5.924 1.00 -0.40 \ ATOM 16 CE LYS H 7 21.073 -22.368 6.170 1.00 -0.40 \ ATOM 17 NZ LYS H 7 22.417 -22.961 6.407 1.00 -0.40 \ ATOM 18 N TRP H 8 18.968 -23.367 0.484 1.00 2.10 \ ATOM 19 CA TRP H 8 18.528 -22.531 -0.627 1.00 2.10 \ ATOM 20 C TRP H 8 17.704 -21.347 -0.135 1.00 2.10 \ ATOM 21 O TRP H 8 16.895 -21.479 0.783 1.00 2.10 \ ATOM 22 CB TRP H 8 17.722 -23.355 -1.634 1.00 2.10 \ ATOM 23 CG TRP H 8 16.463 -23.944 -1.078 1.00 2.10 \ ATOM 24 CD1 TRP H 8 16.336 -25.125 -0.412 1.00 2.10 \ ATOM 25 CD2 TRP H 8 15.142 -23.378 -1.155 1.00 2.10 \ ATOM 26 NE1 TRP H 8 15.021 -25.330 -0.062 1.00 2.10 \ ATOM 27 CE2 TRP H 8 14.277 -24.283 -0.503 1.00 2.10 \ ATOM 28 CE3 TRP H 8 14.623 -22.207 -1.704 1.00 2.10 \ ATOM 29 CZ2 TRP H 8 12.905 -24.034 -0.392 1.00 2.10 \ ATOM 30 CZ3 TRP H 8 13.263 -21.969 -1.589 1.00 2.10 \ ATOM 31 CH2 TRP H 8 12.420 -22.880 -0.938 1.00 2.10 \ ATOM 32 N ALA H 9 17.918 -20.189 -0.750 1.00 -0.81 \ ATOM 33 CA ALA H 9 17.189 -18.980 -0.387 1.00 -0.81 \ ATOM 34 C ALA H 9 15.976 -18.791 -1.291 1.00 -0.81 \ ATOM 35 O ALA H 9 16.039 -19.068 -2.489 1.00 -0.81 \ ATOM 36 CB ALA H 9 18.101 -17.768 -0.461 1.00 -0.81 \ ATOM 37 N CYS H 10 14.875 -18.320 -0.713 1.00 1.82 \ ATOM 38 CA CYS H 10 13.632 -18.150 -1.458 1.00 1.82 \ ATOM 39 C CYS H 10 13.688 -16.933 -2.380 1.00 1.82 \ ATOM 40 O CYS H 10 14.446 -15.994 -2.137 1.00 1.82 \ ATOM 41 CB CYS H 10 12.449 -18.028 -0.499 1.00 1.82 \ ATOM 42 SG CYS H 10 10.845 -17.933 -1.318 1.00 1.82 \ ATOM 43 N GLU H 11 12.881 -16.958 -3.437 1.00 -0.49 \ ATOM 44 CA GLU H 11 12.859 -15.877 -4.419 1.00 -0.49 \ ATOM 45 C GLU H 11 12.145 -14.629 -3.907 1.00 -0.49 \ ATOM 46 O GLU H 11 12.503 -13.510 -4.275 1.00 -0.49 \ ATOM 47 CB GLU H 11 12.189 -16.339 -5.718 1.00 -0.49 \ ATOM 48 CG GLU H 11 13.029 -17.265 -6.581 1.00 -0.49 \ ATOM 49 CD GLU H 11 12.484 -17.385 -7.992 1.00 -0.49 \ ATOM 50 OE1 GLU H 11 11.636 -16.549 -8.374 1.00 -0.49 \ ATOM 51 OE2 GLU H 11 12.901 -18.313 -8.718 1.00 -0.49 \ ATOM 52 N TYR H 12 11.138 -14.824 -3.061 1.00 -0.78 \ ATOM 53 CA TYR H 12 10.269 -13.728 -2.641 1.00 -0.78 \ ATOM 54 C TYR H 12 10.682 -13.136 -1.296 1.00 -0.78 \ ATOM 55 O TYR H 12 10.516 -11.939 -1.063 1.00 -0.78 \ ATOM 56 CB TYR H 12 8.816 -14.205 -2.592 1.00 -0.78 \ ATOM 57 CG TYR H 12 8.301 -14.680 -3.934 1.00 -0.78 \ ATOM 58 CD1 TYR H 12 8.495 -15.991 -4.350 1.00 -0.78 \ ATOM 59 CD2 TYR H 12 7.630 -13.815 -4.787 1.00 -0.78 \ ATOM 60 CE1 TYR H 12 8.031 -16.428 -5.576 1.00 -0.78 \ ATOM 61 CE2 TYR H 12 7.160 -14.243 -6.013 1.00 -0.78 \ ATOM 62 CZ TYR H 12 7.365 -15.550 -6.404 1.00 -0.78 \ ATOM 63 OH TYR H 12 6.900 -15.981 -7.626 1.00 -0.78 \ ATOM 64 N CYS H 13 11.211 -13.972 -0.410 1.00 2.10 \ ATOM 65 CA CYS H 13 11.825 -13.481 0.820 1.00 2.10 \ ATOM 66 C CYS H 13 13.210 -14.101 0.963 1.00 2.10 \ ATOM 67 O CYS H 13 13.482 -15.167 0.413 1.00 2.10 \ ATOM 68 CB CYS H 13 10.955 -13.787 2.044 1.00 2.10 \ ATOM 69 SG CYS H 13 10.946 -15.511 2.575 1.00 2.10 \ ATOM 70 N THR H 14 14.085 -13.426 1.696 1.00 -0.29 \ ATOM 71 CA THR H 14 15.489 -13.812 1.770 1.00 -0.29 \ ATOM 72 C THR H 14 15.720 -15.150 2.481 1.00 -0.29 \ ATOM 73 O THR H 14 16.763 -15.775 2.299 1.00 -0.29 \ ATOM 74 CB THR H 14 16.311 -12.722 2.487 1.00 -0.29 \ ATOM 75 OG1 THR H 14 15.843 -11.428 2.086 1.00 -0.29 \ ATOM 76 CG2 THR H 14 17.792 -12.850 2.156 1.00 -0.29 \ ATOM 77 N TYR H 15 14.740 -15.586 3.272 1.00 -0.14 \ ATOM 78 CA TYR H 15 14.896 -16.735 4.170 1.00 -0.14 \ ATOM 79 C TYR H 15 15.466 -17.983 3.500 1.00 -0.14 \ ATOM 80 O TYR H 15 14.914 -18.484 2.520 1.00 -0.14 \ ATOM 81 CB TYR H 15 13.552 -17.084 4.817 1.00 -0.14 \ ATOM 82 CG TYR H 15 13.664 -18.050 5.980 1.00 -0.14 \ ATOM 83 CD1 TYR H 15 14.233 -17.652 7.183 1.00 -0.14 \ ATOM 84 CD2 TYR H 15 13.190 -19.351 5.880 1.00 -0.14 \ ATOM 85 CE1 TYR H 15 14.336 -18.524 8.250 1.00 -0.14 \ ATOM 86 CE2 TYR H 15 13.287 -20.232 6.944 1.00 -0.14 \ ATOM 87 CZ TYR H 15 13.861 -19.811 8.127 1.00 -0.14 \ ATOM 88 OH TYR H 15 13.962 -20.681 9.190 1.00 -0.14 \ ATOM 89 N GLU H 16 16.577 -18.473 4.042 1.00 -0.72 \ ATOM 90 CA GLU H 16 17.221 -19.683 3.539 1.00 -0.72 \ ATOM 91 C GLU H 16 16.579 -20.920 4.155 1.00 -0.72 \ ATOM 92 O GLU H 16 16.489 -21.037 5.379 1.00 -0.72 \ ATOM 93 CB GLU H 16 18.723 -19.660 3.836 1.00 -0.72 \ ATOM 94 CG GLU H 16 19.461 -18.485 3.216 1.00 -0.72 \ ATOM 95 CD GLU H 16 20.938 -18.492 3.543 1.00 -0.72 \ ATOM 96 OE1 GLU H 16 21.392 -19.429 4.234 1.00 -0.72 \ ATOM 97 OE2 GLU H 16 21.645 -17.560 3.109 1.00 -0.72 \ ATOM 98 N ASN H 17 16.134 -21.839 3.303 1.00 2.10 \ ATOM 99 CA ASN H 17 15.460 -23.043 3.767 1.00 2.10 \ ATOM 100 C ASN H 17 16.291 -24.302 3.565 1.00 2.10 \ ATOM 101 O ASN H 17 17.340 -24.272 2.925 1.00 2.10 \ ATOM 102 CB ASN H 17 14.110 -23.198 3.062 1.00 2.10 \ ATOM 103 CG ASN H 17 13.153 -22.071 3.385 1.00 2.10 \ ATOM 104 OD1 ASN H 17 12.415 -22.127 4.371 1.00 2.10 \ ATOM 105 ND2 ASN H 17 13.163 -21.035 2.555 1.00 2.10 \ ATOM 106 N TRP H 18 15.809 -25.406 4.123 1.00 -0.47 \ ATOM 107 CA TRP H 18 16.505 -26.680 4.033 1.00 -0.47 \ ATOM 108 C TRP H 18 16.222 -27.373 2.702 1.00 -0.47 \ ATOM 109 O TRP H 18 15.120 -27.265 2.164 1.00 -0.47 \ ATOM 110 CB TRP H 18 16.109 -27.578 5.206 1.00 -0.47 \ ATOM 111 CG TRP H 18 16.615 -27.071 6.523 1.00 -0.47 \ ATOM 112 CD1 TRP H 18 15.975 -26.217 7.374 1.00 -0.47 \ ATOM 113 CD2 TRP H 18 17.874 -27.377 7.134 1.00 -0.47 \ ATOM 114 NE1 TRP H 18 16.756 -25.976 8.478 1.00 -0.47 \ ATOM 115 CE2 TRP H 18 17.929 -26.678 8.356 1.00 -0.47 \ ATOM 116 CE3 TRP H 18 18.963 -28.177 6.769 1.00 -0.47 \ ATOM 117 CZ2 TRP H 18 19.024 -26.753 9.215 1.00 -0.47 \ ATOM 118 CZ3 TRP H 18 20.050 -28.251 7.622 1.00 -0.47 \ ATOM 119 CH2 TRP H 18 20.072 -27.543 8.831 1.00 -0.47 \ ATOM 120 N PRO H 19 17.229 -28.081 2.164 1.00 0.06 \ ATOM 121 CA PRO H 19 17.155 -28.770 0.870 1.00 0.06 \ ATOM 122 C PRO H 19 15.948 -29.700 0.732 1.00 0.06 \ ATOM 123 O PRO H 19 15.452 -29.894 -0.379 1.00 0.06 \ ATOM 124 CB PRO H 19 18.456 -29.575 0.834 1.00 0.06 \ ATOM 125 CG PRO H 19 19.399 -28.787 1.672 1.00 0.06 \ ATOM 126 CD PRO H 19 18.565 -28.206 2.775 1.00 0.06 \ ATOM 127 N SER H 20 15.484 -30.260 1.844 1.00 -0.39 \ ATOM 128 CA SER H 20 14.370 -31.202 1.820 1.00 -0.39 \ ATOM 129 C SER H 20 13.025 -30.498 1.657 1.00 -0.39 \ ATOM 130 O SER H 20 12.034 -31.121 1.280 1.00 -0.39 \ ATOM 131 CB SER H 20 14.363 -32.048 3.095 1.00 -0.39 \ ATOM 132 OG SER H 20 15.589 -32.740 3.256 1.00 -0.39 \ ATOM 133 N ALA H 21 12.997 -29.199 1.938 1.00 -0.31 \ ATOM 134 CA ALA H 21 11.755 -28.434 1.891 1.00 -0.31 \ ATOM 135 C ALA H 21 11.387 -28.029 0.467 1.00 -0.31 \ ATOM 136 O ALA H 21 12.166 -27.369 -0.221 1.00 -0.31 \ ATOM 137 CB ALA H 21 11.864 -27.202 2.776 1.00 -0.31 \ ATOM 138 N ILE H 22 10.194 -28.427 0.034 1.00 -0.85 \ ATOM 139 CA ILE H 22 9.702 -28.086 -1.298 1.00 -0.85 \ ATOM 140 C ILE H 22 9.088 -26.691 -1.313 1.00 -0.85 \ ATOM 141 O ILE H 22 8.874 -26.102 -2.372 1.00 -0.85 \ ATOM 142 CB ILE H 22 8.651 -29.096 -1.789 1.00 -0.85 \ ATOM 143 CG1 ILE H 22 7.406 -29.041 -0.902 1.00 -0.85 \ ATOM 144 CG2 ILE H 22 9.234 -30.499 -1.811 1.00 -0.85 \ ATOM 145 CD1 ILE H 22 6.256 -29.878 -1.410 1.00 -0.85 \ ATOM 146 N LYS H 23 8.800 -26.176 -0.124 1.00 -0.39 \ ATOM 147 CA LYS H 23 8.236 -24.843 0.035 1.00 -0.39 \ ATOM 148 C LYS H 23 8.920 -24.132 1.190 1.00 -0.39 \ ATOM 149 O LYS H 23 9.261 -24.760 2.193 1.00 -0.39 \ ATOM 150 CB LYS H 23 6.727 -24.915 0.282 1.00 -0.39 \ ATOM 151 CG LYS H 23 5.878 -24.981 -0.974 1.00 -0.39 \ ATOM 152 CD LYS H 23 4.437 -25.320 -0.630 1.00 -0.39 \ ATOM 153 CE LYS H 23 3.486 -24.896 -1.734 1.00 -0.39 \ ATOM 154 NZ LYS H 23 3.333 -23.415 -1.786 1.00 -0.39 \ ATOM 155 N CYS H 24 9.127 -22.828 1.047 1.00 2.10 \ ATOM 156 CA CYS H 24 9.685 -22.033 2.133 1.00 2.10 \ ATOM 157 C CYS H 24 8.744 -22.056 3.330 1.00 2.10 \ ATOM 158 O CYS H 24 7.522 -22.076 3.177 1.00 2.10 \ ATOM 159 CB CYS H 24 9.936 -20.595 1.684 1.00 2.10 \ ATOM 160 SG CYS H 24 8.435 -19.673 1.318 1.00 2.10 \ ATOM 161 N THR H 25 9.320 -22.062 4.524 1.00 -0.44 \ ATOM 162 CA THR H 25 8.536 -22.116 5.748 1.00 -0.44 \ ATOM 163 C THR H 25 7.908 -20.764 6.078 1.00 -0.44 \ ATOM 164 O THR H 25 6.942 -20.685 6.836 1.00 -0.44 \ ATOM 165 CB THR H 25 9.404 -22.563 6.938 1.00 -0.44 \ ATOM 166 OG1 THR H 25 10.289 -21.499 7.307 1.00 -0.44 \ ATOM 167 CG2 THR H 25 10.229 -23.787 6.564 1.00 -0.44 \ ATOM 168 N MET H 26 8.457 -19.704 5.491 1.00 -0.17 \ ATOM 169 CA MET H 26 8.149 -18.339 5.914 1.00 -0.17 \ ATOM 170 C MET H 26 7.016 -17.682 5.124 1.00 -0.17 \ ATOM 171 O MET H 26 5.964 -17.382 5.689 1.00 -0.17 \ ATOM 172 CB MET H 26 9.405 -17.468 5.825 1.00 -0.17 \ ATOM 173 CG MET H 26 9.491 -16.398 6.905 1.00 -0.17 \ ATOM 174 SD MET H 26 9.756 -17.103 8.542 1.00 -0.17 \ ATOM 175 CE MET H 26 9.605 -15.629 9.574 1.00 -0.17 \ ATOM 176 N CYS H 27 7.226 -17.447 3.830 1.00 2.10 \ ATOM 177 CA CYS H 27 6.200 -16.796 3.014 1.00 2.10 \ ATOM 178 C CYS H 27 5.417 -17.797 2.172 1.00 2.10 \ ATOM 179 O CYS H 27 4.637 -17.408 1.301 1.00 2.10 \ ATOM 180 CB CYS H 27 6.820 -15.722 2.110 1.00 2.10 \ ATOM 181 SG CYS H 27 7.916 -16.334 0.811 1.00 2.10 \ ATOM 182 N ARG H 28 5.635 -19.082 2.440 1.00 -0.72 \ ATOM 183 CA ARG H 28 4.882 -20.162 1.805 1.00 -0.72 \ ATOM 184 C ARG H 28 4.970 -20.140 0.278 1.00 -0.72 \ ATOM 185 O ARG H 28 4.022 -20.512 -0.414 1.00 -0.72 \ ATOM 186 CB ARG H 28 3.416 -20.106 2.244 1.00 -0.72 \ ATOM 187 CG ARG H 28 3.220 -20.303 3.739 1.00 -0.72 \ ATOM 188 CD ARG H 28 1.826 -19.886 4.176 1.00 -0.72 \ ATOM 189 NE ARG H 28 1.590 -18.463 3.950 1.00 -0.72 \ ATOM 190 CZ ARG H 28 0.467 -17.831 4.273 1.00 -0.72 \ ATOM 191 NH1 ARG H 28 -0.530 -18.495 4.842 1.00 -0.72 \ ATOM 192 NH2 ARG H 28 0.342 -16.533 4.029 1.00 -0.72 \ ATOM 193 N ALA H 29 6.114 -19.704 -0.239 1.00 -0.61 \ ATOM 194 CA ALA H 29 6.357 -19.711 -1.675 1.00 -0.61 \ ATOM 195 C ALA H 29 6.842 -21.085 -2.118 1.00 -0.61 \ ATOM 196 O ALA H 29 7.134 -21.944 -1.287 1.00 -0.61 \ ATOM 197 CB ALA H 29 7.365 -18.642 -2.050 1.00 -0.61 \ ATOM 198 N GLN H 30 6.932 -21.288 -3.428 1.00 -0.40 \ ATOM 199 CA GLN H 30 7.306 -22.587 -3.975 1.00 -0.40 \ ATOM 200 C GLN H 30 8.812 -22.669 -4.225 1.00 -0.40 \ ATOM 201 O GLN H 30 9.505 -21.651 -4.247 1.00 -0.40 \ ATOM 202 CB GLN H 30 6.533 -22.855 -5.271 1.00 -0.40 \ ATOM 203 CG GLN H 30 6.412 -24.324 -5.649 1.00 -0.40 \ ATOM 204 N ARG H 31 9.310 -23.889 -4.399 1.00 1.00 \ ATOM 205 CA ARG H 31 10.712 -24.125 -4.729 1.00 1.00 \ ATOM 206 C ARG H 31 11.035 -23.575 -6.114 1.00 1.00 \ ATOM 207 O ARG H 31 10.322 -23.858 -7.078 1.00 1.00 \ ATOM 208 CB ARG H 31 11.025 -25.624 -4.669 1.00 1.00 \ ATOM 209 CG ARG H 31 12.494 -25.991 -4.827 1.00 1.00 \ ATOM 210 CD ARG H 31 13.280 -25.703 -3.558 1.00 1.00 \ ATOM 211 NE ARG H 31 14.408 -26.617 -3.395 1.00 1.00 \ ATOM 212 CZ ARG H 31 15.613 -26.422 -3.920 1.00 1.00 \ ATOM 213 NH1 ARG H 31 15.856 -25.343 -4.651 1.00 1.00 \ ATOM 214 NH2 ARG H 31 16.577 -27.310 -3.717 1.00 1.00 \ ATOM 215 N PRO H 32 12.112 -22.782 -6.218 1.00 -0.40 \ ATOM 216 CA PRO H 32 12.529 -22.204 -7.501 1.00 -0.40 \ ATOM 217 C PRO H 32 13.057 -23.256 -8.473 1.00 -0.40 \ ATOM 218 O PRO H 32 13.624 -24.264 -8.048 1.00 -0.40 \ ATOM 219 CB PRO H 32 13.637 -21.226 -7.099 1.00 -0.40 \ ATOM 220 CG PRO H 32 14.179 -21.781 -5.830 1.00 -0.40 \ ATOM 221 CD PRO H 32 12.999 -22.374 -5.115 1.00 -0.40 \ ATOM 222 N SER H 33 12.868 -23.017 -9.767 1.00 -0.25 \ ATOM 223 CA SER H 33 13.323 -23.943 -10.797 1.00 -0.25 \ ATOM 224 C SER H 33 14.845 -23.970 -10.882 1.00 -0.25 \ ATOM 225 O SER H 33 15.452 -23.158 -11.582 1.00 -0.25 \ ATOM 226 CB SER H 33 12.728 -23.569 -12.157 1.00 -0.25 \ """, "e5af6H1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5af6H1_csv", state=0, origin=1) cmd.zoom("e5af6H1_csv", animate=-1)