cmd.read_pdbstr("""\ ATOM 1 N VAL Y 18 18.281 75.945 72.062 1.00 -1.50 \ ATOM 2 CA VAL Y 18 19.458 75.937 71.162 1.00 -1.50 \ ATOM 3 C VAL Y 18 19.843 77.354 70.666 1.00 -1.50 \ ATOM 4 O VAL Y 18 20.656 77.490 69.738 1.00 -1.50 \ ATOM 5 CB VAL Y 18 19.222 74.975 69.976 1.00 -1.50 \ ATOM 6 N ILE Y 19 19.289 78.394 71.306 1.00 0.64 \ ATOM 7 CA ILE Y 19 19.447 79.806 70.867 1.00 0.64 \ ATOM 8 C ILE Y 19 20.903 80.318 70.789 1.00 0.64 \ ATOM 9 O ILE Y 19 21.275 81.028 69.841 1.00 0.64 \ ATOM 10 CB ILE Y 19 18.588 80.785 71.715 1.00 0.64 \ ATOM 11 N ALA Y 20 21.721 79.968 71.777 1.00 0.64 \ ATOM 12 CA ALA Y 20 23.128 80.385 71.766 1.00 0.64 \ ATOM 13 C ALA Y 20 23.890 79.816 70.560 1.00 0.64 \ ATOM 14 O ALA Y 20 24.540 80.570 69.809 1.00 0.64 \ ATOM 15 CB ALA Y 20 23.808 79.994 73.064 1.00 0.64 \ ATOM 16 N GLN Y 21 23.803 78.495 70.379 1.00 0.64 \ ATOM 17 CA GLN Y 21 24.451 77.810 69.237 1.00 0.64 \ ATOM 18 C GLN Y 21 23.917 78.270 67.872 1.00 0.64 \ ATOM 19 O GLN Y 21 24.685 78.382 66.908 1.00 0.64 \ ATOM 20 CB GLN Y 21 24.318 76.277 69.338 1.00 0.64 \ ATOM 21 CG GLN Y 21 24.858 75.655 70.611 1.00 0.64 \ ATOM 22 CD GLN Y 21 24.108 74.397 70.998 1.00 0.64 \ ATOM 23 OE1 GLN Y 21 22.883 74.286 70.778 1.00 0.64 \ ATOM 24 NE2 GLN Y 21 24.832 73.432 71.579 1.00 0.64 \ ATOM 25 N LEU Y 22 22.603 78.510 67.798 1.00 0.64 \ ATOM 26 CA LEU Y 22 21.961 78.991 66.566 1.00 0.64 \ ATOM 27 C LEU Y 22 22.459 80.377 66.159 1.00 0.64 \ ATOM 28 O LEU Y 22 22.694 80.620 64.967 1.00 0.64 \ ATOM 29 CB LEU Y 22 20.429 78.995 66.692 1.00 0.64 \ ATOM 30 CG LEU Y 22 19.743 77.640 66.499 1.00 0.64 \ ATOM 31 CD1 LEU Y 22 18.589 77.507 67.477 1.00 0.64 \ ATOM 32 CD2 LEU Y 22 19.290 77.437 65.056 1.00 0.64 \ ATOM 33 N THR Y 23 22.611 81.275 67.138 1.00 0.64 \ ATOM 34 CA THR Y 23 23.193 82.607 66.881 1.00 0.64 \ ATOM 35 C THR Y 23 24.659 82.505 66.400 1.00 0.64 \ ATOM 36 O THR Y 23 25.069 83.194 65.451 1.00 0.64 \ ATOM 37 CB THR Y 23 23.110 83.514 68.137 1.00 0.64 \ ATOM 38 OG1 THR Y 23 21.762 83.532 68.614 1.00 0.64 \ ATOM 39 CG2 THR Y 23 23.546 84.952 67.802 1.00 0.64 \ ATOM 40 N MET Y 24 25.446 81.651 67.055 1.00 0.64 \ ATOM 41 CA MET Y 24 26.850 81.459 66.655 1.00 0.64 \ ATOM 42 C MET Y 24 26.917 80.992 65.195 1.00 0.64 \ ATOM 43 O MET Y 24 27.605 81.610 64.370 1.00 0.64 \ ATOM 44 CB MET Y 24 27.584 80.464 67.562 1.00 0.64 \ ATOM 45 CG MET Y 24 27.733 80.857 69.029 1.00 0.64 \ ATOM 46 SD MET Y 24 28.340 82.543 69.291 1.00 0.64 \ ATOM 47 CE MET Y 24 26.769 83.381 69.570 1.00 0.64 \ ATOM 48 N ILE Y 25 26.172 79.930 64.869 1.00 -1.50 \ ATOM 49 CA ILE Y 25 26.207 79.394 63.499 1.00 -1.50 \ ATOM 50 C ILE Y 25 25.644 80.422 62.501 1.00 -1.50 \ ATOM 51 O ILE Y 25 26.058 80.447 61.336 1.00 -1.50 \ ATOM 52 CB ILE Y 25 25.565 77.968 63.362 1.00 -1.50 \ ATOM 53 CG1 ILE Y 25 25.885 77.338 61.983 1.00 -1.50 \ ATOM 54 CG2 ILE Y 25 24.063 78.013 63.602 1.00 -1.50 \ ATOM 55 CD1 ILE Y 25 27.360 77.264 61.619 1.00 -1.50 \ ATOM 56 N ALA Y 26 24.724 81.275 62.971 1.00 0.64 \ ATOM 57 CA ALA Y 26 24.179 82.350 62.146 1.00 0.64 \ ATOM 58 C ALA Y 26 25.259 83.351 61.708 1.00 0.64 \ ATOM 59 O ALA Y 26 25.361 83.684 60.517 1.00 0.64 \ ATOM 60 CB ALA Y 26 23.037 83.057 62.861 1.00 0.64 \ ATOM 61 N MET Y 27 26.076 83.831 62.637 1.00 -1.50 \ ATOM 62 CA MET Y 27 27.093 84.800 62.222 1.00 -1.50 \ ATOM 63 C MET Y 27 28.335 84.184 61.588 1.00 -1.50 \ ATOM 64 O MET Y 27 28.981 84.822 60.740 1.00 -1.50 \ ATOM 65 CB MET Y 27 27.486 85.741 63.331 1.00 -1.50 \ ATOM 66 CG MET Y 27 27.719 85.141 64.691 1.00 -1.50 \ ATOM 67 SD MET Y 27 27.200 86.448 65.836 1.00 -1.50 \ ATOM 68 CE MET Y 27 27.586 87.927 64.870 1.00 -1.50 \ ATOM 69 N ILE Y 28 28.660 82.953 61.983 1.00 0.64 \ ATOM 70 CA ILE Y 28 29.720 82.212 61.288 1.00 0.64 \ ATOM 71 C ILE Y 28 29.248 81.972 59.851 1.00 0.64 \ ATOM 72 O ILE Y 28 29.994 82.194 58.907 1.00 0.64 \ ATOM 73 CB ILE Y 28 30.077 80.903 62.015 1.00 0.64 \ ATOM 74 CG1 ILE Y 28 30.746 81.226 63.352 1.00 0.64 \ ATOM 75 CG2 ILE Y 28 30.978 80.007 61.154 1.00 0.64 \ ATOM 76 CD1 ILE Y 28 30.758 80.067 64.329 1.00 0.64 \ ATOM 77 N GLY Y 29 27.979 81.600 59.680 1.00 -1.50 \ ATOM 78 CA GLY Y 29 27.482 81.268 58.347 1.00 -1.50 \ ATOM 79 C GLY Y 29 27.407 82.463 57.417 1.00 -1.50 \ ATOM 80 O GLY Y 29 27.661 82.333 56.227 1.00 -1.50 \ ATOM 81 N ILE Y 30 27.074 83.639 57.959 1.00 0.64 \ ATOM 82 CA ILE Y 30 26.941 84.854 57.136 1.00 0.64 \ ATOM 83 C ILE Y 30 28.328 85.400 56.781 1.00 0.64 \ ATOM 84 O ILE Y 30 28.460 86.072 55.785 1.00 0.64 \ ATOM 85 CB ILE Y 30 26.087 85.993 57.789 1.00 0.64 \ ATOM 86 CG1 ILE Y 30 24.789 85.476 58.433 1.00 0.64 \ ATOM 87 CG2 ILE Y 30 25.752 87.078 56.769 1.00 0.64 \ ATOM 88 CD1 ILE Y 30 23.751 84.896 57.486 1.00 0.64 \ ATOM 89 N ALA Y 31 29.352 85.096 57.564 1.00 0.64 \ ATOM 90 CA ALA Y 31 30.699 85.639 57.268 1.00 0.64 \ ATOM 91 C ALA Y 31 31.207 85.367 55.844 1.00 0.64 \ ATOM 92 O ALA Y 31 31.642 86.291 55.162 1.00 0.64 \ ATOM 93 CB ALA Y 31 31.726 85.175 58.282 1.00 0.64 \ ATOM 94 N GLY Y 32 31.195 84.104 55.412 1.00 0.64 \ ATOM 95 CA GLY Y 32 31.511 83.776 54.010 1.00 0.64 \ ATOM 96 C GLY Y 32 30.815 84.606 52.946 1.00 0.64 \ ATOM 97 O GLY Y 32 31.464 85.326 52.193 1.00 0.64 \ ATOM 98 N PRO Y 33 29.473 84.538 52.878 1.00 0.64 \ ATOM 99 CA PRO Y 33 28.793 85.317 51.849 1.00 0.64 \ ATOM 100 C PRO Y 33 28.936 86.836 52.063 1.00 0.64 \ ATOM 101 O PRO Y 33 28.868 87.604 51.095 1.00 0.64 \ ATOM 102 CB PRO Y 33 27.330 84.875 51.975 1.00 0.64 \ ATOM 103 CG PRO Y 33 27.402 83.533 52.654 1.00 0.64 \ ATOM 104 CD PRO Y 33 28.537 83.678 53.618 1.00 0.64 \ ATOM 105 N MET Y 34 29.158 87.263 53.304 1.00 -1.50 \ ATOM 106 CA MET Y 34 29.399 88.695 53.574 1.00 -1.50 \ ATOM 107 C MET Y 34 30.644 89.152 52.827 1.00 -1.50 \ ATOM 108 O MET Y 34 30.615 90.186 52.167 1.00 -1.50 \ ATOM 109 CB MET Y 34 29.503 88.973 55.092 1.00 -1.50 \ ATOM 110 CG MET Y 34 29.476 90.446 55.514 1.00 -1.50 \ ATOM 111 SD MET Y 34 28.314 91.477 54.577 1.00 -1.50 \ ATOM 112 CE MET Y 34 26.682 90.882 55.070 1.00 -1.50 \ ATOM 113 N ILE Y 35 31.716 88.365 52.917 1.00 -1.50 \ ATOM 114 CA ILE Y 35 33.003 88.649 52.225 1.00 -1.50 \ ATOM 115 C ILE Y 35 32.788 88.841 50.728 1.00 -1.50 \ ATOM 116 O ILE Y 35 33.293 89.803 50.122 1.00 -1.50 \ ATOM 117 CB ILE Y 35 34.042 87.528 52.434 1.00 -1.50 \ ATOM 118 CG1 ILE Y 35 34.458 87.435 53.912 1.00 -1.50 \ ATOM 119 CG2 ILE Y 35 35.241 87.720 51.500 1.00 -1.50 \ ATOM 120 CD1 ILE Y 35 35.188 86.156 54.288 1.00 -1.50 \ ATOM 121 N ILE Y 36 31.996 87.942 50.145 1.00 0.64 \ ATOM 122 CA ILE Y 36 31.705 87.978 48.711 1.00 0.64 \ ATOM 123 C ILE Y 36 30.896 89.220 48.380 1.00 0.64 \ ATOM 124 O ILE Y 36 31.087 89.850 47.335 1.00 0.64 \ ATOM 125 CB ILE Y 36 30.935 86.711 48.244 1.00 0.64 \ ATOM 126 CG1 ILE Y 36 31.712 85.447 48.601 1.00 0.64 \ ATOM 127 CG2 ILE Y 36 30.619 86.779 46.752 1.00 0.64 \ ATOM 128 CD1 ILE Y 36 33.222 85.532 48.330 1.00 0.64 \ ATOM 129 N PHE Y 37 29.998 89.570 49.282 1.00 0.64 \ ATOM 130 CA PHE Y 37 29.113 90.692 49.062 1.00 0.64 \ ATOM 131 C PHE Y 37 29.904 92.002 49.111 1.00 0.64 \ ATOM 132 O PHE Y 37 29.837 92.799 48.178 1.00 0.64 \ ATOM 133 CB PHE Y 37 28.003 90.696 50.092 1.00 0.64 \ ATOM 134 CG PHE Y 37 26.997 91.769 49.877 1.00 0.64 \ ATOM 135 CD1 PHE Y 37 27.099 92.985 50.563 1.00 0.64 \ ATOM 136 CD2 PHE Y 37 25.938 91.570 49.004 1.00 0.64 \ ATOM 137 CE1 PHE Y 37 26.149 93.983 50.378 1.00 0.64 \ ATOM 138 CE2 PHE Y 37 24.987 92.565 48.808 1.00 0.64 \ ATOM 139 CZ PHE Y 37 25.096 93.768 49.493 1.00 0.64 \ ATOM 140 N LEU Y 38 30.646 92.205 50.191 1.00 0.64 \ ATOM 141 CA LEU Y 38 31.504 93.380 50.319 1.00 0.64 \ ATOM 142 C LEU Y 38 32.395 93.583 49.087 1.00 0.64 \ ATOM 143 O LEU Y 38 32.378 94.673 48.483 1.00 0.64 \ ATOM 144 CB LEU Y 38 32.341 93.310 51.587 1.00 0.64 \ ATOM 145 CG LEU Y 38 31.573 93.359 52.909 1.00 0.64 \ ATOM 146 CD1 LEU Y 38 32.598 93.297 54.044 1.00 0.64 \ ATOM 147 CD2 LEU Y 38 30.704 94.620 52.991 1.00 0.64 \ ATOM 148 N LEU Y 39 33.136 92.538 48.704 1.00 0.64 \ ATOM 149 CA LEU Y 39 33.961 92.552 47.484 1.00 0.64 \ ATOM 150 C LEU Y 39 33.227 92.903 46.183 1.00 0.64 \ ATOM 151 O LEU Y 39 33.735 93.698 45.382 1.00 0.64 \ ATOM 152 CB LEU Y 39 34.708 91.247 47.326 1.00 0.64 \ ATOM 153 CG LEU Y 39 35.874 91.206 48.294 1.00 0.64 \ ATOM 154 CD1 LEU Y 39 36.608 89.869 48.227 1.00 0.64 \ ATOM 155 CD2 LEU Y 39 36.821 92.360 47.989 1.00 0.64 \ ATOM 156 N ALA Y 40 32.044 92.320 45.979 1.00 0.64 \ ATOM 157 CA ALA Y 40 31.203 92.614 44.802 1.00 0.64 \ ATOM 158 C ALA Y 40 30.742 94.091 44.707 1.00 0.64 \ ATOM 159 O ALA Y 40 30.852 94.718 43.654 1.00 0.64 \ ATOM 160 CB ALA Y 40 29.995 91.677 44.762 1.00 0.64 \ ATOM 161 N VAL Y 41 30.183 94.596 45.803 1.00 -1.50 \ ATOM 162 CA VAL Y 41 29.898 96.010 46.038 1.00 -1.50 \ ATOM 163 C VAL Y 41 31.106 96.892 45.662 1.00 -1.50 \ ATOM 164 O VAL Y 41 30.980 97.813 44.868 1.00 -1.50 \ ATOM 165 CB VAL Y 41 29.463 96.189 47.520 1.00 -1.50 \ ATOM 166 CG1 VAL Y 41 29.562 97.631 47.987 1.00 -1.50 \ ATOM 167 CG2 VAL Y 41 28.044 95.674 47.705 1.00 -1.50 \ ATOM 168 N ARG Y 42 32.278 96.559 46.187 1.00 0.64 \ ATOM 169 CA ARG Y 42 33.502 97.334 45.976 1.00 0.64 \ ATOM 170 C ARG Y 42 34.228 97.057 44.658 1.00 0.64 \ ATOM 171 O ARG Y 42 35.360 97.508 44.480 1.00 0.64 \ ATOM 172 CB ARG Y 42 34.502 97.058 47.104 1.00 0.64 \ ATOM 173 CG ARG Y 42 34.012 97.367 48.508 1.00 0.64 \ ATOM 174 CD ARG Y 42 34.772 96.493 49.495 1.00 0.64 \ ATOM 175 NE ARG Y 42 35.582 97.247 50.446 1.00 0.64 \ ATOM 176 CZ ARG Y 42 35.103 97.793 51.564 1.00 0.64 \ ATOM 177 NH1 ARG Y 42 33.809 97.694 51.866 1.00 0.64 \ ATOM 178 NH2 ARG Y 42 35.912 98.455 52.382 1.00 0.64 \ ATOM 179 N ARG Y 43 33.600 96.299 43.759 1.00 -1.50 \ ATOM 180 CA ARG Y 43 34.252 95.815 42.538 1.00 -1.50 \ ATOM 181 C ARG Y 43 35.658 95.259 42.812 1.00 -1.50 \ ATOM 182 O ARG Y 43 36.615 95.591 42.112 1.00 -1.50 \ ATOM 183 CB ARG Y 43 34.283 96.905 41.454 1.00 -1.50 \ ATOM 184 CG ARG Y 43 32.929 97.536 41.180 1.00 -1.50 \ ATOM 185 CD ARG Y 43 32.691 97.758 39.699 1.00 -1.50 \ ATOM 186 NE ARG Y 43 31.428 98.462 39.476 1.00 -1.50 \ ATOM 187 CZ ARG Y 43 30.216 97.898 39.484 1.00 -1.50 \ ATOM 188 NH1 ARG Y 43 30.066 96.595 39.705 1.00 -1.50 \ ATOM 189 NH2 ARG Y 43 29.139 98.647 39.270 1.00 -1.50 \ ATOM 190 N GLY Y 44 35.772 94.417 43.841 1.00 0.64 \ ATOM 191 CA GLY Y 44 37.043 93.797 44.222 1.00 0.64 \ ATOM 192 C GLY Y 44 37.528 92.693 43.296 1.00 0.64 \ ATOM 193 O GLY Y 44 36.869 92.339 42.343 1.00 0.64 \ ATOM 194 N ASN Y 45 38.723 92.184 43.553 1.00 -1.50 \ ATOM 195 CA ASN Y 45 39.338 91.166 42.706 1.00 -1.50 \ ATOM 196 C ASN Y 45 38.783 89.723 42.934 1.00 -1.50 \ ATOM 197 O ASN Y 45 39.523 88.818 43.345 1.00 -1.50 \ ATOM 198 CB ASN Y 45 40.851 91.208 42.940 1.00 -1.50 \ ATOM 199 CG ASN Y 45 41.621 90.414 41.916 1.00 -1.50 \ ATOM 200 OD1 ASN Y 45 41.192 90.247 40.782 1.00 -1.50 \ ATOM 201 ND2 ASN Y 45 42.776 89.926 42.316 1.00 -1.50 \ ATOM 202 N LEU Y 46 37.497 89.520 42.653 1.00 0.64 \ ATOM 203 CA LEU Y 46 36.872 88.198 42.785 1.00 0.64 \ ATOM 204 C LEU Y 46 37.310 87.249 41.655 1.00 0.64 \ ATOM 205 O LEU Y 46 37.258 86.009 41.787 1.00 0.64 \ ATOM 206 CB LEU Y 46 35.332 88.325 42.767 1.00 0.64 \ ATOM 207 CG LEU Y 46 34.558 88.908 43.959 1.00 0.64 \ ATOM 208 CD1 LEU Y 46 33.063 89.039 43.654 1.00 0.64 \ ATOM 209 CD2 LEU Y 46 34.764 88.076 45.205 1.00 0.64 \ ATOM 210 OXT LEU Y 46 37.664 87.698 40.547 1.00 0.64 \ """, "e5b5eY1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5b5eY1_csv", state=0, origin=1) cmd.zoom("e5b5eY1_csv", animate=-1)