cmd.read_pdbstr("""\ ATOM 1 N THR x 2 60.055 -30.262 16.457 1.00 -1.00 \ ATOM 2 CA THR x 2 59.423 -31.492 15.918 1.00 -1.00 \ ATOM 3 C THR x 2 58.452 -31.111 14.798 1.00 -1.00 \ ATOM 4 O THR x 2 57.869 -30.019 14.824 1.00 -1.00 \ ATOM 5 CB THR x 2 58.704 -32.248 17.031 1.00 -1.00 \ ATOM 6 N ILE x 3 58.305 -31.990 13.805 1.00 -1.00 \ ATOM 7 CA ILE x 3 57.314 -31.778 12.737 1.00 -1.00 \ ATOM 8 C ILE x 3 56.075 -32.629 12.984 1.00 -1.00 \ ATOM 9 O ILE x 3 56.049 -33.853 12.753 1.00 -1.00 \ ATOM 10 CB ILE x 3 57.912 -31.901 11.318 1.00 -1.00 \ ATOM 11 CG1 ILE x 3 59.001 -30.822 11.149 1.00 -1.00 \ ATOM 12 CG2 ILE x 3 56.827 -31.765 10.242 1.00 -1.00 \ ATOM 13 CD1 ILE x 3 59.747 -30.857 9.833 1.00 -1.00 \ ATOM 14 N THR x 4 55.039 -31.953 13.488 1.00 0.46 \ ATOM 15 CA THR x 4 53.805 -32.626 13.864 1.00 0.46 \ ATOM 16 C THR x 4 53.138 -33.072 12.575 1.00 0.46 \ ATOM 17 O THR x 4 53.491 -32.577 11.495 1.00 0.46 \ ATOM 18 CB THR x 4 52.884 -31.684 14.686 1.00 0.46 \ ATOM 19 OG1 THR x 4 52.562 -30.544 13.887 1.00 0.46 \ ATOM 20 CG2 THR x 4 53.608 -31.213 15.965 1.00 0.46 \ ATOM 21 N PRO x 5 52.189 -34.023 12.676 1.00 1.80 \ ATOM 22 CA PRO x 5 51.374 -34.418 11.541 1.00 1.80 \ ATOM 23 C PRO x 5 50.710 -33.221 10.830 1.00 1.80 \ ATOM 24 O PRO x 5 50.676 -33.184 9.583 1.00 1.80 \ ATOM 25 CB PRO x 5 50.311 -35.301 12.173 1.00 1.80 \ ATOM 26 CG PRO x 5 50.977 -35.896 13.361 1.00 1.80 \ ATOM 27 CD PRO x 5 51.872 -34.811 13.880 1.00 1.80 \ ATOM 28 N SER x 6 50.184 -32.250 11.596 1.00 1.80 \ ATOM 29 CA SER x 6 49.475 -31.134 10.943 1.00 1.80 \ ATOM 30 C SER x 6 50.442 -30.158 10.315 1.00 1.80 \ ATOM 31 O SER x 6 50.110 -29.516 9.332 1.00 1.80 \ ATOM 32 CB SER x 6 48.504 -30.421 11.917 1.00 1.80 \ ATOM 33 OG SER x 6 49.239 -29.855 12.991 1.00 1.80 \ ATOM 34 N LEU x 7 51.654 -30.028 10.864 1.00 1.80 \ ATOM 35 CA LEU x 7 52.690 -29.247 10.150 1.00 1.80 \ ATOM 36 C LEU x 7 53.108 -29.925 8.809 1.00 1.80 \ ATOM 37 O LEU x 7 53.239 -29.261 7.775 1.00 1.80 \ ATOM 38 CB LEU x 7 53.904 -28.970 11.034 1.00 1.80 \ ATOM 39 CG LEU x 7 55.001 -28.064 10.468 1.00 1.80 \ ATOM 40 CD1 LEU x 7 54.469 -26.694 10.069 1.00 1.80 \ ATOM 41 CD2 LEU x 7 56.136 -27.931 11.470 1.00 1.80 \ ATOM 42 N LYS x 8 53.307 -31.241 8.835 1.00 0.25 \ ATOM 43 CA LYS x 8 53.494 -31.970 7.582 1.00 0.25 \ ATOM 44 C LYS x 8 52.291 -31.745 6.620 1.00 0.25 \ ATOM 45 O LYS x 8 52.492 -31.395 5.453 1.00 0.25 \ ATOM 46 CB LYS x 8 53.704 -33.456 7.871 1.00 0.25 \ ATOM 47 CG LYS x 8 54.082 -34.274 6.637 1.00 0.25 \ ATOM 48 CD LYS x 8 53.770 -35.750 6.861 1.00 0.25 \ ATOM 49 CE LYS x 8 53.904 -36.557 5.572 1.00 0.25 \ ATOM 50 NZ LYS x 8 55.274 -37.133 5.452 1.00 0.25 \ ATOM 51 N GLY x 9 51.055 -31.906 7.131 1.00 -0.60 \ ATOM 52 CA GLY x 9 49.846 -31.523 6.365 1.00 -0.60 \ ATOM 53 C GLY x 9 49.892 -30.104 5.801 1.00 -0.60 \ ATOM 54 O GLY x 9 49.590 -29.878 4.625 1.00 -0.60 \ ATOM 55 N PHE x 10 50.314 -29.145 6.628 1.00 1.80 \ ATOM 56 CA PHE x 10 50.442 -27.759 6.173 1.00 1.80 \ ATOM 57 C PHE x 10 51.381 -27.655 4.977 1.00 1.80 \ ATOM 58 O PHE x 10 51.102 -26.942 3.997 1.00 1.80 \ ATOM 59 CB PHE x 10 50.918 -26.840 7.330 1.00 1.80 \ ATOM 60 CG PHE x 10 51.202 -25.443 6.897 1.00 1.80 \ ATOM 61 CD1 PHE x 10 50.167 -24.488 6.820 1.00 1.80 \ ATOM 62 CD2 PHE x 10 52.486 -25.063 6.517 1.00 1.80 \ ATOM 63 CE1 PHE x 10 50.431 -23.195 6.405 1.00 1.80 \ ATOM 64 CE2 PHE x 10 52.738 -23.774 6.086 1.00 1.80 \ ATOM 65 CZ PHE x 10 51.711 -22.837 6.032 1.00 1.80 \ ATOM 66 N PHE x 11 52.534 -28.336 5.066 1.00 0.25 \ ATOM 67 CA PHE x 11 53.484 -28.318 3.962 1.00 0.25 \ ATOM 68 C PHE x 11 52.941 -28.984 2.699 1.00 0.25 \ ATOM 69 O PHE x 11 53.158 -28.488 1.602 1.00 0.25 \ ATOM 70 CB PHE x 11 54.807 -28.984 4.401 1.00 0.25 \ ATOM 71 CG PHE x 11 55.592 -28.180 5.397 1.00 0.25 \ ATOM 72 CD1 PHE x 11 55.749 -26.804 5.243 1.00 0.25 \ ATOM 73 CD2 PHE x 11 56.251 -28.817 6.455 1.00 0.25 \ ATOM 74 CE1 PHE x 11 56.526 -26.065 6.135 1.00 0.25 \ ATOM 75 CE2 PHE x 11 57.052 -28.091 7.342 1.00 0.25 \ ATOM 76 CZ PHE x 11 57.179 -26.712 7.186 1.00 0.25 \ ATOM 77 N ILE x 12 52.246 -30.110 2.861 1.00 -1.25 \ ATOM 78 CA ILE x 12 51.569 -30.756 1.718 1.00 -1.25 \ ATOM 79 C ILE x 12 50.560 -29.794 1.074 1.00 -1.25 \ ATOM 80 O ILE x 12 50.425 -29.731 -0.150 1.00 -1.25 \ ATOM 81 CB ILE x 12 50.885 -32.078 2.117 1.00 -1.25 \ ATOM 82 CG1 ILE x 12 51.926 -33.117 2.543 1.00 -1.25 \ ATOM 83 CG2 ILE x 12 50.069 -32.635 0.961 1.00 -1.25 \ ATOM 84 CD1 ILE x 12 51.344 -34.295 3.296 1.00 -1.25 \ ATOM 85 N GLY x 13 49.859 -29.024 1.900 1.00 0.42 \ ATOM 86 CA GLY x 13 48.880 -28.081 1.344 1.00 0.42 \ ATOM 87 C GLY x 13 49.538 -26.943 0.596 1.00 0.42 \ ATOM 88 O GLY x 13 49.054 -26.506 -0.454 1.00 0.42 \ ATOM 89 N LEU x 14 50.652 -26.459 1.136 1.00 0.35 \ ATOM 90 CA LEU x 14 51.361 -25.348 0.546 1.00 0.35 \ ATOM 91 C LEU x 14 51.961 -25.770 -0.790 1.00 0.35 \ ATOM 92 O LEU x 14 51.987 -25.002 -1.769 1.00 0.35 \ ATOM 93 CB LEU x 14 52.494 -24.943 1.481 1.00 0.35 \ ATOM 94 CG LEU x 14 53.224 -23.612 1.336 1.00 0.35 \ ATOM 95 CD1 LEU x 14 52.275 -22.442 1.207 1.00 0.35 \ ATOM 96 CD2 LEU x 14 54.132 -23.411 2.547 1.00 0.35 \ ATOM 97 N LEU x 15 52.498 -26.981 -0.801 1.00 -1.28 \ ATOM 98 CA LEU x 15 53.167 -27.464 -2.004 1.00 -1.28 \ ATOM 99 C LEU x 15 52.123 -27.669 -3.076 1.00 -1.28 \ ATOM 100 O LEU x 15 52.292 -27.225 -4.217 1.00 -1.28 \ ATOM 101 CB LEU x 15 53.895 -28.766 -1.701 1.00 -1.28 \ ATOM 102 CG LEU x 15 54.661 -29.305 -2.920 1.00 -1.28 \ ATOM 103 CD1 LEU x 15 55.911 -28.473 -3.184 1.00 -1.28 \ ATOM 104 CD2 LEU x 15 54.989 -30.769 -2.700 1.00 -1.28 \ ATOM 105 N SER x 16 51.009 -28.298 -2.693 1.00 -0.61 \ ATOM 106 CA SER x 16 49.909 -28.504 -3.613 1.00 -0.61 \ ATOM 107 C SER x 16 49.511 -27.199 -4.269 1.00 -0.61 \ ATOM 108 O SER x 16 49.379 -27.125 -5.505 1.00 -0.61 \ ATOM 109 CB SER x 16 48.721 -29.136 -2.913 1.00 -0.61 \ ATOM 110 OG SER x 16 49.068 -30.396 -2.365 1.00 -0.61 \ ATOM 111 N GLY x 17 49.344 -26.151 -3.452 1.00 0.37 \ ATOM 112 CA GLY x 17 48.909 -24.870 -3.982 1.00 0.37 \ ATOM 113 C GLY x 17 49.959 -24.235 -4.867 1.00 0.37 \ ATOM 114 O GLY x 17 49.635 -23.654 -5.908 1.00 0.37 \ ATOM 115 N ALA x 18 51.232 -24.350 -4.485 1.00 0.35 \ ATOM 116 CA ALA x 18 52.281 -23.767 -5.326 1.00 0.35 \ ATOM 117 C ALA x 18 52.285 -24.494 -6.703 1.00 0.35 \ ATOM 118 O ALA x 18 52.301 -23.858 -7.775 1.00 0.35 \ ATOM 119 CB ALA x 18 53.629 -23.858 -4.624 1.00 0.35 \ ATOM 120 N VAL x 19 52.147 -25.813 -6.658 1.00 1.80 \ ATOM 121 CA VAL x 19 52.130 -26.634 -7.873 1.00 1.80 \ ATOM 122 C VAL x 19 50.971 -26.245 -8.783 1.00 1.80 \ ATOM 123 O VAL x 19 51.188 -25.948 -9.959 1.00 1.80 \ ATOM 124 CB VAL x 19 52.121 -28.155 -7.539 1.00 1.80 \ ATOM 125 CG1 VAL x 19 51.845 -28.982 -8.777 1.00 1.80 \ ATOM 126 CG2 VAL x 19 53.445 -28.586 -6.923 1.00 1.80 \ ATOM 127 N VAL x 20 49.743 -26.219 -8.242 1.00 0.37 \ ATOM 128 CA VAL x 20 48.573 -25.783 -9.019 1.00 0.37 \ ATOM 129 C VAL x 20 48.855 -24.408 -9.631 1.00 0.37 \ ATOM 130 O VAL x 20 48.648 -24.196 -10.827 1.00 0.37 \ ATOM 131 CB VAL x 20 47.257 -25.778 -8.172 1.00 0.37 \ ATOM 132 CG1 VAL x 20 46.108 -25.090 -8.905 1.00 0.37 \ ATOM 133 CG2 VAL x 20 46.833 -27.199 -7.796 1.00 0.37 \ ATOM 134 N LEU x 21 49.344 -23.470 -8.825 1.00 0.37 \ ATOM 135 CA LEU x 21 49.585 -22.111 -9.327 1.00 0.37 \ ATOM 136 C LEU x 21 50.700 -22.052 -10.366 1.00 0.37 \ ATOM 137 O LEU x 21 50.547 -21.424 -11.427 1.00 0.37 \ ATOM 138 CB LEU x 21 49.926 -21.163 -8.183 1.00 0.37 \ ATOM 139 CG LEU x 21 48.735 -20.699 -7.326 1.00 0.37 \ ATOM 140 CD1 LEU x 21 49.252 -19.821 -6.199 1.00 0.37 \ ATOM 141 CD2 LEU x 21 47.663 -19.975 -8.140 1.00 0.37 \ ATOM 142 N GLY x 22 51.820 -22.699 -10.038 1.00 -1.27 \ ATOM 143 CA GLY x 22 52.991 -22.787 -10.949 1.00 -1.27 \ ATOM 144 C GLY x 22 52.639 -23.447 -12.280 1.00 -1.27 \ ATOM 145 O GLY x 22 52.966 -22.931 -13.337 1.00 -1.27 \ ATOM 146 N LEU x 23 51.961 -24.579 -12.227 1.00 0.25 \ ATOM 147 CA LEU x 23 51.494 -25.210 -13.443 1.00 0.25 \ ATOM 148 C LEU x 23 50.554 -24.304 -14.223 1.00 0.25 \ ATOM 149 O LEU x 23 50.670 -24.205 -15.445 1.00 0.25 \ ATOM 150 CB LEU x 23 50.780 -26.516 -13.158 1.00 0.25 \ ATOM 151 CG LEU x 23 51.665 -27.711 -12.902 1.00 0.25 \ ATOM 152 CD1 LEU x 23 50.744 -28.914 -12.899 1.00 0.25 \ ATOM 153 CD2 LEU x 23 52.720 -27.820 -13.994 1.00 0.25 \ ATOM 154 N THR x 24 49.633 -23.630 -13.526 1.00 -1.30 \ ATOM 155 CA THR x 24 48.652 -22.799 -14.226 1.00 -1.30 \ ATOM 156 C THR x 24 49.372 -21.692 -14.973 1.00 -1.30 \ ATOM 157 O THR x 24 49.108 -21.446 -16.156 1.00 -1.30 \ ATOM 158 CB THR x 24 47.589 -22.215 -13.246 1.00 -1.30 \ ATOM 159 OG1 THR x 24 46.830 -23.293 -12.693 1.00 -1.30 \ ATOM 160 CG2 THR x 24 46.658 -21.221 -13.944 1.00 -1.30 \ ATOM 161 N PHE x 25 50.286 -21.019 -14.290 1.00 -0.63 \ ATOM 162 CA PHE x 25 51.004 -19.928 -14.949 1.00 -0.63 \ ATOM 163 C PHE x 25 51.994 -20.356 -16.058 1.00 -0.63 \ ATOM 164 O PHE x 25 52.056 -19.687 -17.096 1.00 -0.63 \ ATOM 165 CB PHE x 25 51.666 -18.998 -13.934 1.00 -0.63 \ ATOM 166 CG PHE x 25 50.720 -18.000 -13.324 1.00 -0.63 \ ATOM 167 CD1 PHE x 25 50.134 -18.241 -12.086 1.00 -0.63 \ ATOM 168 CD2 PHE x 25 50.406 -16.815 -13.996 1.00 -0.63 \ ATOM 169 CE1 PHE x 25 49.257 -17.319 -11.516 1.00 -0.63 \ ATOM 170 CE2 PHE x 25 49.532 -15.888 -13.429 1.00 -0.63 \ ATOM 171 CZ PHE x 25 48.959 -16.145 -12.191 1.00 -0.63 \ ATOM 172 N ALA x 26 52.766 -21.428 -15.843 1.00 -0.60 \ ATOM 173 CA ALA x 26 53.688 -21.929 -16.901 1.00 -0.60 \ ATOM 174 C ALA x 26 52.879 -22.246 -18.149 1.00 -0.60 \ ATOM 175 O ALA x 26 53.242 -21.844 -19.263 1.00 -0.60 \ ATOM 176 CB ALA x 26 54.453 -23.161 -16.447 1.00 -0.60 \ ATOM 177 N VAL x 27 51.741 -22.908 -17.945 1.00 -0.60 \ ATOM 178 CA VAL x 27 50.853 -23.218 -19.052 1.00 -0.60 \ ATOM 179 C VAL x 27 50.324 -21.960 -19.752 1.00 -0.60 \ ATOM 180 O VAL x 27 50.388 -21.856 -20.991 1.00 -0.60 \ ATOM 181 CB VAL x 27 49.715 -24.163 -18.640 1.00 -0.60 \ ATOM 182 CG1 VAL x 27 48.686 -24.250 -19.750 1.00 -0.60 \ ATOM 183 CG2 VAL x 27 50.266 -25.551 -18.285 1.00 -0.60 \ ATOM 184 N LEU x 28 49.819 -20.995 -18.975 1.00 -1.30 \ ATOM 185 CA LEU x 28 49.276 -19.775 -19.573 1.00 -1.30 \ ATOM 186 C LEU x 28 50.375 -18.973 -20.263 1.00 -1.30 \ ATOM 187 O LEU x 28 50.154 -18.416 -21.320 1.00 -1.30 \ ATOM 188 CB LEU x 28 48.540 -18.899 -18.527 1.00 -1.30 \ ATOM 189 CG LEU x 28 47.212 -19.399 -17.920 1.00 -1.30 \ ATOM 190 CD1 LEU x 28 46.683 -18.358 -16.919 1.00 -1.30 \ ATOM 191 CD2 LEU x 28 46.141 -19.729 -18.957 1.00 -1.30 \ ATOM 192 N ILE x 29 51.557 -18.908 -19.664 1.00 0.35 \ ATOM 193 CA ILE x 29 52.679 -18.199 -20.293 1.00 0.35 \ ATOM 194 C ILE x 29 53.067 -18.922 -21.596 1.00 0.35 \ ATOM 195 O ILE x 29 53.157 -18.287 -22.644 1.00 0.35 \ ATOM 196 CB ILE x 29 53.885 -18.030 -19.330 1.00 0.35 \ ATOM 197 CG1 ILE x 29 53.534 -17.016 -18.221 1.00 0.35 \ ATOM 198 CG2 ILE x 29 55.132 -17.539 -20.073 1.00 0.35 \ ATOM 199 CD1 ILE x 29 54.429 -17.091 -16.989 1.00 0.35 \ ATOM 200 N ALA x 30 53.247 -20.241 -21.535 1.00 -0.57 \ ATOM 201 CA ALA x 30 53.557 -21.013 -22.748 1.00 -0.57 \ ATOM 202 C ALA x 30 52.527 -20.752 -23.848 1.00 -0.57 \ ATOM 203 O ALA x 30 52.908 -20.371 -24.954 1.00 -0.57 \ ATOM 204 CB ALA x 30 53.660 -22.500 -22.436 1.00 -0.57 \ ATOM 205 N ILE x 31 51.230 -20.911 -23.548 1.00 -0.60 \ ATOM 206 CA ILE x 31 50.195 -20.610 -24.547 1.00 -0.60 \ ATOM 207 C ILE x 31 50.278 -19.202 -25.116 1.00 -0.60 \ ATOM 208 O ILE x 31 50.192 -19.032 -26.337 1.00 -0.60 \ ATOM 209 CB ILE x 31 48.769 -20.866 -24.049 1.00 -0.60 \ ATOM 210 CG1 ILE x 31 48.579 -22.354 -23.801 1.00 -0.60 \ ATOM 211 CG2 ILE x 31 47.754 -20.368 -25.071 1.00 -0.60 \ ATOM 212 CD1 ILE x 31 47.450 -22.676 -22.855 1.00 -0.60 \ ATOM 213 N SER x 32 50.410 -18.188 -24.251 1.00 0.37 \ ATOM 214 CA SER x 32 50.466 -16.801 -24.723 1.00 0.37 \ ATOM 215 C SER x 32 51.651 -16.537 -25.656 1.00 0.37 \ ATOM 216 O SER x 32 51.539 -15.699 -26.544 1.00 0.37 \ ATOM 217 CB SER x 32 50.499 -15.791 -23.565 1.00 0.37 \ ATOM 218 OG SER x 32 51.680 -15.898 -22.791 1.00 0.37 \ ATOM 219 N GLN x 33 52.771 -17.231 -25.422 1.00 -0.63 \ ATOM 220 CA GLN x 33 54.005 -17.054 -26.227 1.00 -0.63 \ ATOM 221 C GLN x 33 53.850 -17.677 -27.624 1.00 -0.63 \ ATOM 222 O GLN x 33 54.400 -17.168 -28.606 1.00 -0.63 \ ATOM 223 CB GLN x 33 55.245 -17.647 -25.515 1.00 -0.63 \ ATOM 224 CG GLN x 33 55.713 -16.943 -24.234 1.00 -0.63 \ ATOM 225 CD GLN x 33 56.448 -15.628 -24.476 1.00 -0.63 \ ATOM 226 OE1 GLN x 33 57.061 -15.428 -25.530 1.00 -0.63 \ ATOM 227 NE2 GLN x 33 56.415 -14.730 -23.483 1.00 -0.63 \ ATOM 228 N ILE x 34 53.109 -18.777 -27.702 1.00 -1.30 \ ATOM 229 CA ILE x 34 52.845 -19.470 -28.971 1.00 -1.30 \ ATOM 230 C ILE x 34 51.861 -18.647 -29.795 1.00 -1.30 \ ATOM 231 O ILE x 34 52.040 -18.410 -30.996 1.00 -1.30 \ ATOM 232 CB ILE x 34 52.185 -20.851 -28.707 1.00 -1.30 \ ATOM 233 CG1 ILE x 34 53.194 -21.862 -28.156 1.00 -1.30 \ ATOM 234 CG2 ILE x 34 51.470 -21.380 -29.953 1.00 -1.30 \ ATOM 235 CD1 ILE x 34 52.564 -23.128 -27.591 1.00 -1.30 \ ATOM 236 N ASP x 35 50.828 -18.190 -29.106 1.00 -0.63 \ ATOM 237 CA ASP x 35 49.590 -17.774 -29.720 1.00 -0.63 \ ATOM 238 C ASP x 35 49.504 -16.242 -29.654 1.00 -0.63 \ ATOM 239 O ASP x 35 48.609 -15.678 -29.016 1.00 -0.63 \ ATOM 240 CB ASP x 35 48.451 -18.508 -28.985 1.00 -0.63 \ ATOM 241 CG ASP x 35 47.065 -18.119 -29.460 1.00 -0.63 \ ATOM 242 OD1 ASP x 35 46.905 -17.688 -30.626 1.00 -0.63 \ ATOM 243 OD2 ASP x 35 46.130 -18.258 -28.637 1.00 -0.63 \ ATOM 244 N LYS x 36 50.462 -15.587 -30.317 1.00 -1.00 \ ATOM 245 CA LYS x 36 50.601 -14.126 -30.296 1.00 -1.00 \ ATOM 246 C LYS x 36 49.716 -13.444 -31.344 1.00 -1.00 \ ATOM 247 O LYS x 36 49.348 -12.270 -31.196 1.00 -1.00 \ ATOM 248 CB LYS x 36 52.065 -13.718 -30.510 1.00 -1.00 \ ATOM 249 CG LYS x 36 52.991 -14.049 -29.363 1.00 -1.00 \ ATOM 250 CD LYS x 36 54.426 -13.673 -29.723 1.00 -1.00 \ ATOM 251 CE LYS x 36 55.230 -13.378 -28.465 1.00 -1.00 \ ATOM 252 NZ LYS x 36 56.707 -13.552 -28.596 1.00 -1.00 \ """, "e5b66X1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5b66X1_csv", state=0, origin=1) cmd.zoom("e5b66X1_csv", animate=-1)