cmd.read_pdbstr("""\ ATOM 1 N VAL Y 18 20.418 76.610 73.198 1.00 -1.50 \ ATOM 2 CA VAL Y 18 19.872 76.376 71.814 1.00 -1.50 \ ATOM 3 C VAL Y 18 19.915 77.654 70.964 1.00 -1.50 \ ATOM 4 O VAL Y 18 20.382 77.628 69.820 1.00 -1.50 \ ATOM 5 CB VAL Y 18 18.427 75.810 71.806 1.00 -1.50 \ ATOM 6 CG1 VAL Y 18 18.088 75.282 70.420 1.00 -1.50 \ ATOM 7 CG2 VAL Y 18 18.244 74.711 72.850 1.00 -1.50 \ ATOM 8 N ILE Y 19 19.426 78.761 71.526 1.00 0.64 \ ATOM 9 CA ILE Y 19 19.504 80.078 70.880 1.00 0.64 \ ATOM 10 C ILE Y 19 20.971 80.519 70.723 1.00 0.64 \ ATOM 11 O ILE Y 19 21.352 81.138 69.719 1.00 0.64 \ ATOM 12 CB ILE Y 19 18.713 81.147 71.672 1.00 0.64 \ ATOM 13 N ALA Y 20 21.785 80.182 71.721 1.00 0.64 \ ATOM 14 CA ALA Y 20 23.206 80.494 71.714 1.00 0.64 \ ATOM 15 C ALA Y 20 23.914 79.867 70.512 1.00 0.64 \ ATOM 16 O ALA Y 20 24.568 80.581 69.740 1.00 0.64 \ ATOM 17 CB ALA Y 20 23.839 80.040 73.012 1.00 0.64 \ ATOM 18 N GLN Y 21 23.773 78.547 70.342 1.00 0.64 \ ATOM 19 CA GLN Y 21 24.428 77.841 69.213 1.00 0.64 \ ATOM 20 C GLN Y 21 23.891 78.288 67.849 1.00 0.64 \ ATOM 21 O GLN Y 21 24.657 78.409 66.884 1.00 0.64 \ ATOM 22 CB GLN Y 21 24.289 76.318 69.321 1.00 0.64 \ ATOM 23 CG GLN Y 21 24.734 75.711 70.633 1.00 0.64 \ ATOM 24 CD GLN Y 21 23.992 74.432 70.947 1.00 0.64 \ ATOM 25 OE1 GLN Y 21 22.770 74.333 70.733 1.00 0.64 \ ATOM 26 NE2 GLN Y 21 24.721 73.437 71.459 1.00 0.64 \ ATOM 27 N LEU Y 22 22.572 78.501 67.774 1.00 0.64 \ ATOM 28 CA LEU Y 22 21.928 78.994 66.546 1.00 0.64 \ ATOM 29 C LEU Y 22 22.442 80.386 66.149 1.00 0.64 \ ATOM 30 O LEU Y 22 22.761 80.609 64.968 1.00 0.64 \ ATOM 31 CB LEU Y 22 20.391 78.950 66.653 1.00 0.64 \ ATOM 32 CG LEU Y 22 19.797 77.541 66.462 1.00 0.64 \ ATOM 33 CD1 LEU Y 22 18.621 77.285 67.392 1.00 0.64 \ ATOM 34 CD2 LEU Y 22 19.430 77.261 65.007 1.00 0.64 \ ATOM 35 N THR Y 23 22.550 81.296 67.128 1.00 0.64 \ ATOM 36 CA THR Y 23 23.159 82.622 66.897 1.00 0.64 \ ATOM 37 C THR Y 23 24.620 82.513 66.408 1.00 0.64 \ ATOM 38 O THR Y 23 25.020 83.202 65.463 1.00 0.64 \ ATOM 39 CB THR Y 23 23.121 83.504 68.172 1.00 0.64 \ ATOM 40 OG1 THR Y 23 21.781 83.566 68.659 1.00 0.64 \ ATOM 41 CG2 THR Y 23 23.616 84.924 67.866 1.00 0.64 \ ATOM 42 N MET Y 24 25.404 81.658 67.065 1.00 0.64 \ ATOM 43 CA MET Y 24 26.798 81.425 66.682 1.00 0.64 \ ATOM 44 C MET Y 24 26.898 80.974 65.220 1.00 0.64 \ ATOM 45 O MET Y 24 27.602 81.599 64.425 1.00 0.64 \ ATOM 46 CB MET Y 24 27.461 80.388 67.597 1.00 0.64 \ ATOM 47 CG MET Y 24 27.696 80.809 69.047 1.00 0.64 \ ATOM 48 SD MET Y 24 28.405 82.462 69.268 1.00 0.64 \ ATOM 49 CE MET Y 24 26.891 83.427 69.436 1.00 0.64 \ ATOM 50 N ILE Y 25 26.179 79.909 64.861 1.00 -1.50 \ ATOM 51 CA ILE Y 25 26.227 79.415 63.476 1.00 -1.50 \ ATOM 52 C ILE Y 25 25.636 80.439 62.500 1.00 -1.50 \ ATOM 53 O ILE Y 25 26.038 80.474 61.338 1.00 -1.50 \ ATOM 54 CB ILE Y 25 25.617 77.982 63.273 1.00 -1.50 \ ATOM 55 CG1 ILE Y 25 26.100 77.370 61.934 1.00 -1.50 \ ATOM 56 CG2 ILE Y 25 24.097 77.992 63.349 1.00 -1.50 \ ATOM 57 CD1 ILE Y 25 27.579 77.026 61.894 1.00 -1.50 \ ATOM 58 N ALA Y 26 24.702 81.267 62.975 1.00 0.64 \ ATOM 59 CA ALA Y 26 24.120 82.307 62.129 1.00 0.64 \ ATOM 60 C ALA Y 26 25.177 83.339 61.722 1.00 0.64 \ ATOM 61 O ALA Y 26 25.283 83.692 60.540 1.00 0.64 \ ATOM 62 CB ALA Y 26 22.939 82.973 62.814 1.00 0.64 \ ATOM 63 N MET Y 27 25.977 83.811 62.672 1.00 -1.50 \ ATOM 64 CA MET Y 27 27.003 84.787 62.303 1.00 -1.50 \ ATOM 65 C MET Y 27 28.252 84.165 61.682 1.00 -1.50 \ ATOM 66 O MET Y 27 28.913 84.796 60.844 1.00 -1.50 \ ATOM 67 CB MET Y 27 27.354 85.725 63.441 1.00 -1.50 \ ATOM 68 CG MET Y 27 27.697 85.100 64.776 1.00 -1.50 \ ATOM 69 SD MET Y 27 27.000 86.216 66.025 1.00 -1.50 \ ATOM 70 CE MET Y 27 26.671 87.668 65.013 1.00 -1.50 \ ATOM 71 N ILE Y 28 28.572 82.932 62.072 1.00 0.64 \ ATOM 72 CA ILE Y 28 29.603 82.176 61.345 1.00 0.64 \ ATOM 73 C ILE Y 28 29.145 81.956 59.894 1.00 0.64 \ ATOM 74 O ILE Y 28 29.899 82.222 58.956 1.00 0.64 \ ATOM 75 CB ILE Y 28 29.964 80.859 62.064 1.00 0.64 \ ATOM 76 CG1 ILE Y 28 30.680 81.182 63.377 1.00 0.64 \ ATOM 77 CG2 ILE Y 28 30.839 79.960 61.188 1.00 0.64 \ ATOM 78 CD1 ILE Y 28 30.760 80.024 64.330 1.00 0.64 \ ATOM 79 N GLY Y 29 27.891 81.541 59.712 1.00 -1.50 \ ATOM 80 CA GLY Y 29 27.369 81.229 58.383 1.00 -1.50 \ ATOM 81 C GLY Y 29 27.310 82.415 57.436 1.00 -1.50 \ ATOM 82 O GLY Y 29 27.496 82.257 56.228 1.00 -1.50 \ ATOM 83 N ILE Y 30 27.064 83.608 57.982 1.00 0.64 \ ATOM 84 CA ILE Y 30 26.906 84.821 57.164 1.00 0.64 \ ATOM 85 C ILE Y 30 28.265 85.385 56.742 1.00 0.64 \ ATOM 86 O ILE Y 30 28.355 86.039 55.710 1.00 0.64 \ ATOM 87 CB ILE Y 30 26.078 85.926 57.888 1.00 0.64 \ ATOM 88 CG1 ILE Y 30 25.231 86.721 56.892 1.00 0.64 \ ATOM 89 CG2 ILE Y 30 26.975 86.834 58.731 1.00 0.64 \ ATOM 90 CD1 ILE Y 30 23.791 86.236 56.823 1.00 0.64 \ ATOM 91 N ALA Y 31 29.304 85.122 57.531 1.00 0.64 \ ATOM 92 CA ALA Y 31 30.652 85.664 57.276 1.00 0.64 \ ATOM 93 C ALA Y 31 31.193 85.403 55.859 1.00 0.64 \ ATOM 94 O ALA Y 31 31.673 86.336 55.214 1.00 0.64 \ ATOM 95 CB ALA Y 31 31.643 85.170 58.320 1.00 0.64 \ ATOM 96 N GLY Y 32 31.138 84.149 55.389 1.00 0.64 \ ATOM 97 CA GLY Y 32 31.471 83.833 53.988 1.00 0.64 \ ATOM 98 C GLY Y 32 30.777 84.641 52.897 1.00 0.64 \ ATOM 99 O GLY Y 32 31.437 85.314 52.117 1.00 0.64 \ ATOM 100 N PRO Y 33 29.431 84.578 52.817 1.00 0.64 \ ATOM 101 CA PRO Y 33 28.700 85.359 51.799 1.00 0.64 \ ATOM 102 C PRO Y 33 28.793 86.880 52.014 1.00 0.64 \ ATOM 103 O PRO Y 33 28.708 87.638 51.045 1.00 0.64 \ ATOM 104 CB PRO Y 33 27.253 84.883 51.955 1.00 0.64 \ ATOM 105 CG PRO Y 33 27.373 83.524 52.586 1.00 0.64 \ ATOM 106 CD PRO Y 33 28.538 83.643 53.525 1.00 0.64 \ ATOM 107 N MET Y 34 28.979 87.311 53.265 1.00 -1.50 \ ATOM 108 CA MET Y 34 29.269 88.725 53.561 1.00 -1.50 \ ATOM 109 C MET Y 34 30.565 89.179 52.858 1.00 -1.50 \ ATOM 110 O MET Y 34 30.573 90.227 52.209 1.00 -1.50 \ ATOM 111 CB MET Y 34 29.320 88.959 55.083 1.00 -1.50 \ ATOM 112 CG MET Y 34 29.375 90.418 55.537 1.00 -1.50 \ ATOM 113 SD MET Y 34 28.275 91.491 54.583 1.00 -1.50 \ ATOM 114 CE MET Y 34 26.619 90.838 54.919 1.00 -1.50 \ ATOM 115 N ILE Y 35 31.633 88.381 52.968 1.00 -1.50 \ ATOM 116 CA ILE Y 35 32.925 88.644 52.250 1.00 -1.50 \ ATOM 117 C ILE Y 35 32.722 88.841 50.743 1.00 -1.50 \ ATOM 118 O ILE Y 35 33.246 89.799 50.143 1.00 -1.50 \ ATOM 119 CB ILE Y 35 33.962 87.520 52.458 1.00 -1.50 \ ATOM 120 CG1 ILE Y 35 34.360 87.405 53.934 1.00 -1.50 \ ATOM 121 CG2 ILE Y 35 35.175 87.701 51.529 1.00 -1.50 \ ATOM 122 CD1 ILE Y 35 35.210 86.178 54.262 1.00 -1.50 \ ATOM 123 N ILE Y 36 31.938 87.947 50.136 1.00 0.64 \ ATOM 124 CA ILE Y 36 31.661 88.025 48.702 1.00 0.64 \ ATOM 125 C ILE Y 36 30.804 89.252 48.380 1.00 0.64 \ ATOM 126 O ILE Y 36 30.998 89.921 47.365 1.00 0.64 \ ATOM 127 CB ILE Y 36 30.977 86.735 48.177 1.00 0.64 \ ATOM 128 CG1 ILE Y 36 31.801 85.485 48.515 1.00 0.64 \ ATOM 129 CG2 ILE Y 36 30.697 86.834 46.682 1.00 0.64 \ ATOM 130 CD1 ILE Y 36 33.306 85.585 48.264 1.00 0.64 \ ATOM 131 N PHE Y 37 29.865 89.551 49.259 1.00 0.64 \ ATOM 132 CA PHE Y 37 28.997 90.686 49.060 1.00 0.64 \ ATOM 133 C PHE Y 37 29.792 91.987 49.111 1.00 0.64 \ ATOM 134 O PHE Y 37 29.678 92.811 48.205 1.00 0.64 \ ATOM 135 CB PHE Y 37 27.895 90.708 50.097 1.00 0.64 \ ATOM 136 CG PHE Y 37 26.880 91.766 49.852 1.00 0.64 \ ATOM 137 CD1 PHE Y 37 25.915 91.592 48.871 1.00 0.64 \ ATOM 138 CD2 PHE Y 37 26.892 92.950 50.599 1.00 0.64 \ ATOM 139 CE1 PHE Y 37 24.968 92.575 48.638 1.00 0.64 \ ATOM 140 CE2 PHE Y 37 25.947 93.937 50.366 1.00 0.64 \ ATOM 141 CZ PHE Y 37 24.990 93.748 49.382 1.00 0.64 \ ATOM 142 N LEU Y 38 30.580 92.162 50.164 1.00 0.64 \ ATOM 143 CA LEU Y 38 31.424 93.348 50.306 1.00 0.64 \ ATOM 144 C LEU Y 38 32.337 93.541 49.090 1.00 0.64 \ ATOM 145 O LEU Y 38 32.378 94.636 48.511 1.00 0.64 \ ATOM 146 CB LEU Y 38 32.261 93.266 51.572 1.00 0.64 \ ATOM 147 CG LEU Y 38 31.526 93.448 52.898 1.00 0.64 \ ATOM 148 CD1 LEU Y 38 32.556 93.251 53.998 1.00 0.64 \ ATOM 149 CD2 LEU Y 38 30.887 94.831 52.985 1.00 0.64 \ ATOM 150 N LEU Y 39 33.038 92.477 48.692 1.00 0.64 \ ATOM 151 CA LEU Y 39 33.888 92.516 47.494 1.00 0.64 \ ATOM 152 C LEU Y 39 33.153 92.895 46.198 1.00 0.64 \ ATOM 153 O LEU Y 39 33.665 93.698 45.405 1.00 0.64 \ ATOM 154 CB LEU Y 39 34.644 91.215 47.331 1.00 0.64 \ ATOM 155 CG LEU Y 39 35.861 91.193 48.242 1.00 0.64 \ ATOM 156 CD1 LEU Y 39 36.508 89.817 48.271 1.00 0.64 \ ATOM 157 CD2 LEU Y 39 36.861 92.260 47.815 1.00 0.64 \ ATOM 158 N ALA Y 40 31.953 92.340 46.006 1.00 0.64 \ ATOM 159 CA ALA Y 40 31.113 92.625 44.826 1.00 0.64 \ ATOM 160 C ALA Y 40 30.615 94.085 44.712 1.00 0.64 \ ATOM 161 O ALA Y 40 30.645 94.672 43.630 1.00 0.64 \ ATOM 162 CB ALA Y 40 29.934 91.661 44.772 1.00 0.64 \ ATOM 163 N VAL Y 41 30.125 94.632 45.821 1.00 -1.50 \ ATOM 164 CA VAL Y 41 29.753 96.043 45.949 1.00 -1.50 \ ATOM 165 C VAL Y 41 30.949 96.950 45.600 1.00 -1.50 \ ATOM 166 O VAL Y 41 30.816 97.926 44.861 1.00 -1.50 \ ATOM 167 CB VAL Y 41 29.224 96.322 47.379 1.00 -1.50 \ ATOM 168 CG1 VAL Y 41 29.012 97.810 47.621 1.00 -1.50 \ ATOM 169 CG2 VAL Y 41 27.917 95.579 47.604 1.00 -1.50 \ ATOM 170 N ARG Y 42 32.123 96.586 46.093 1.00 0.64 \ ATOM 171 CA ARG Y 42 33.320 97.392 45.918 1.00 0.64 \ ATOM 172 C ARG Y 42 34.134 97.066 44.667 1.00 0.64 \ ATOM 173 O ARG Y 42 35.260 97.543 44.515 1.00 0.64 \ ATOM 174 CB ARG Y 42 34.186 97.267 47.162 1.00 0.64 \ ATOM 175 CG ARG Y 42 33.533 97.902 48.382 1.00 0.64 \ ATOM 176 CD ARG Y 42 33.794 97.077 49.624 1.00 0.64 \ ATOM 177 NE ARG Y 42 35.221 96.854 49.807 1.00 0.64 \ ATOM 178 CZ ARG Y 42 35.909 97.298 50.851 1.00 0.64 \ ATOM 179 NH1 ARG Y 42 35.296 97.970 51.821 1.00 0.64 \ ATOM 180 NH2 ARG Y 42 37.211 97.056 50.930 1.00 0.64 \ ATOM 181 N ARG Y 43 33.558 96.257 43.780 1.00 -1.50 \ ATOM 182 CA ARG Y 43 34.218 95.826 42.550 1.00 -1.50 \ ATOM 183 C ARG Y 43 35.629 95.287 42.810 1.00 -1.50 \ ATOM 184 O ARG Y 43 36.572 95.586 42.073 1.00 -1.50 \ ATOM 185 CB ARG Y 43 34.204 96.949 41.496 1.00 -1.50 \ ATOM 186 CG ARG Y 43 32.801 97.344 41.055 1.00 -1.50 \ ATOM 187 CD ARG Y 43 32.792 98.407 39.968 1.00 -1.50 \ ATOM 188 NE ARG Y 43 31.777 99.422 40.258 1.00 -1.50 \ ATOM 189 CZ ARG Y 43 32.019 100.594 40.851 1.00 -1.50 \ ATOM 190 NH1 ARG Y 43 33.256 100.930 41.204 1.00 -1.50 \ ATOM 191 NH2 ARG Y 43 31.023 101.440 41.085 1.00 -1.50 \ ATOM 192 N GLY Y 44 35.763 94.489 43.869 1.00 0.64 \ ATOM 193 CA GLY Y 44 37.032 93.849 44.193 1.00 0.64 \ ATOM 194 C GLY Y 44 37.435 92.731 43.237 1.00 0.64 \ ATOM 195 O GLY Y 44 36.710 92.394 42.304 1.00 0.64 \ ATOM 196 N ASN Y 45 38.613 92.177 43.482 1.00 -1.50 \ ATOM 197 CA ASN Y 45 39.242 91.156 42.644 1.00 -1.50 \ ATOM 198 C ASN Y 45 38.699 89.722 42.895 1.00 -1.50 \ ATOM 199 O ASN Y 45 39.429 88.828 43.323 1.00 -1.50 \ ATOM 200 CB ASN Y 45 40.759 91.191 42.893 1.00 -1.50 \ ATOM 201 CG ASN Y 45 41.546 90.440 41.839 1.00 -1.50 \ ATOM 202 OD1 ASN Y 45 41.059 90.191 40.739 1.00 -1.50 \ ATOM 203 ND2 ASN Y 45 42.792 90.091 42.167 1.00 -1.50 \ ATOM 204 N LEU Y 46 37.417 89.525 42.632 1.00 0.64 \ ATOM 205 CA LEU Y 46 36.795 88.205 42.762 1.00 0.64 \ ATOM 206 C LEU Y 46 37.255 87.260 41.648 1.00 0.64 \ ATOM 207 O LEU Y 46 37.194 86.031 41.767 1.00 0.64 \ ATOM 208 CB LEU Y 46 35.269 88.355 42.695 1.00 0.64 \ ATOM 209 CG LEU Y 46 34.553 88.989 43.891 1.00 0.64 \ ATOM 210 CD1 LEU Y 46 33.067 89.185 43.564 1.00 0.64 \ ATOM 211 CD2 LEU Y 46 34.732 88.143 45.146 1.00 0.64 \ ATOM 212 OXT LEU Y 46 37.657 87.715 40.571 1.00 0.64 \ """, "e5b66Y1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5b66Y1_csv", state=0, origin=1) cmd.zoom("e5b66Y1_csv", animate=-1)