cmd.read_pdbstr("""\ ATOM 1 N VAL y 18 3.857 -52.212 -19.569 1.00 -1.50 \ ATOM 2 CA VAL y 18 5.127 -51.535 -19.143 1.00 -1.50 \ ATOM 3 C VAL y 18 6.085 -51.335 -20.325 1.00 -1.50 \ ATOM 4 O VAL y 18 6.439 -50.194 -20.653 1.00 -1.50 \ ATOM 5 CB VAL y 18 5.833 -52.293 -18.004 1.00 -1.50 \ ATOM 6 N ILE y 19 6.516 -52.438 -20.946 1.00 0.64 \ ATOM 7 CA ILE y 19 7.193 -52.380 -22.254 1.00 0.64 \ ATOM 8 C ILE y 19 6.111 -52.020 -23.271 1.00 0.64 \ ATOM 9 O ILE y 19 6.343 -51.237 -24.212 1.00 0.64 \ ATOM 10 CB ILE y 19 7.843 -53.729 -22.658 1.00 0.64 \ ATOM 11 CG1 ILE y 19 8.779 -54.252 -21.559 1.00 0.64 \ ATOM 12 CG2 ILE y 19 8.600 -53.597 -23.977 1.00 0.64 \ ATOM 13 CD1 ILE y 19 9.006 -55.754 -21.589 1.00 0.64 \ ATOM 14 N ALA y 20 4.918 -52.573 -23.034 1.00 0.64 \ ATOM 15 CA ALA y 20 3.760 -52.327 -23.854 1.00 0.64 \ ATOM 16 C ALA y 20 3.388 -50.847 -23.817 1.00 0.64 \ ATOM 17 O ALA y 20 3.197 -50.245 -24.869 1.00 0.64 \ ATOM 18 CB ALA y 20 2.600 -53.191 -23.391 1.00 0.64 \ ATOM 19 N GLN y 21 3.296 -50.268 -22.614 1.00 0.64 \ ATOM 20 CA GLN y 21 3.034 -48.827 -22.461 1.00 0.64 \ ATOM 21 C GLN y 21 4.101 -47.957 -23.158 1.00 0.64 \ ATOM 22 O GLN y 21 3.769 -47.009 -23.892 1.00 0.64 \ ATOM 23 CB GLN y 21 2.910 -48.447 -20.978 1.00 0.64 \ ATOM 24 CG GLN y 21 1.527 -48.674 -20.401 1.00 0.64 \ ATOM 25 CD GLN y 21 1.552 -48.975 -18.912 1.00 0.64 \ ATOM 26 OE1 GLN y 21 2.584 -49.358 -18.359 1.00 0.64 \ ATOM 27 NE2 GLN y 21 0.409 -48.802 -18.256 1.00 0.64 \ ATOM 28 N LEU y 22 5.369 -48.308 -22.943 1.00 0.64 \ ATOM 29 CA LEU y 22 6.497 -47.560 -23.492 1.00 0.64 \ ATOM 30 C LEU y 22 6.557 -47.599 -25.020 1.00 0.64 \ ATOM 31 O LEU y 22 6.890 -46.580 -25.639 1.00 0.64 \ ATOM 32 CB LEU y 22 7.820 -48.024 -22.872 1.00 0.64 \ ATOM 33 CG LEU y 22 8.131 -47.520 -21.452 1.00 0.64 \ ATOM 34 CD1 LEU y 22 9.299 -48.290 -20.858 1.00 0.64 \ ATOM 35 CD2 LEU y 22 8.408 -46.021 -21.441 1.00 0.64 \ ATOM 36 N THR y 23 6.226 -48.754 -25.615 1.00 0.64 \ ATOM 37 CA THR y 23 6.125 -48.871 -27.089 1.00 0.64 \ ATOM 38 C THR y 23 4.919 -48.134 -27.653 1.00 0.64 \ ATOM 39 O THR y 23 5.030 -47.486 -28.699 1.00 0.64 \ ATOM 40 CB THR y 23 6.043 -50.331 -27.577 1.00 0.64 \ ATOM 41 OG1 THR y 23 6.842 -51.157 -26.728 1.00 0.64 \ ATOM 42 CG2 THR y 23 6.544 -50.438 -29.036 1.00 0.64 \ ATOM 43 N MET y 24 3.763 -48.269 -26.993 1.00 0.64 \ ATOM 44 CA MET y 24 2.572 -47.524 -27.396 1.00 0.64 \ ATOM 45 C MET y 24 2.897 -46.044 -27.476 1.00 0.64 \ ATOM 46 O MET y 24 2.659 -45.418 -28.506 1.00 0.64 \ ATOM 47 CB MET y 24 1.394 -47.739 -26.444 1.00 0.64 \ ATOM 48 CG MET y 24 0.738 -49.113 -26.522 1.00 0.64 \ ATOM 49 SD MET y 24 0.500 -49.686 -28.224 1.00 0.64 \ ATOM 50 CE MET y 24 -0.984 -50.676 -28.035 1.00 0.64 \ ATOM 51 N ILE y 25 3.470 -45.501 -26.399 1.00 -1.50 \ ATOM 52 CA ILE y 25 3.774 -44.064 -26.329 1.00 -1.50 \ ATOM 53 C ILE y 25 4.922 -43.628 -27.260 1.00 -1.50 \ ATOM 54 O ILE y 25 4.909 -42.490 -27.749 1.00 -1.50 \ ATOM 55 CB ILE y 25 4.004 -43.552 -24.864 1.00 -1.50 \ ATOM 56 CG1 ILE y 25 3.981 -42.013 -24.793 1.00 -1.50 \ ATOM 57 CG2 ILE y 25 5.305 -44.090 -24.279 1.00 -1.50 \ ATOM 58 CD1 ILE y 25 2.653 -41.366 -25.134 1.00 -1.50 \ ATOM 59 N ALA y 26 5.895 -44.514 -27.501 1.00 0.64 \ ATOM 60 CA ALA y 26 6.991 -44.214 -28.450 1.00 0.64 \ ATOM 61 C ALA y 26 6.489 -44.087 -29.889 1.00 0.64 \ ATOM 62 O ALA y 26 6.999 -43.265 -30.654 1.00 0.64 \ ATOM 63 CB ALA y 26 8.115 -45.244 -28.361 1.00 0.64 \ ATOM 64 N MET y 27 5.485 -44.889 -30.241 1.00 -1.50 \ ATOM 65 CA MET y 27 4.897 -44.868 -31.575 1.00 -1.50 \ ATOM 66 C MET y 27 3.957 -43.694 -31.761 1.00 -1.50 \ ATOM 67 O MET y 27 3.936 -43.050 -32.815 1.00 -1.50 \ ATOM 68 CB MET y 27 4.106 -46.146 -31.807 1.00 -1.50 \ ATOM 69 CG MET y 27 4.952 -47.407 -31.867 1.00 -1.50 \ ATOM 70 SD MET y 27 3.979 -48.775 -32.527 1.00 -1.50 \ ATOM 71 CE MET y 27 3.825 -48.297 -34.253 1.00 -1.50 \ ATOM 72 N ILE y 28 3.143 -43.433 -30.743 1.00 0.64 \ ATOM 73 CA ILE y 28 2.243 -42.292 -30.785 1.00 0.64 \ ATOM 74 C ILE y 28 3.118 -41.052 -30.792 1.00 0.64 \ ATOM 75 O ILE y 28 2.841 -40.100 -31.498 1.00 0.64 \ ATOM 76 CB ILE y 28 1.270 -42.300 -29.591 1.00 0.64 \ ATOM 77 CG1 ILE y 28 0.221 -43.392 -29.809 1.00 0.64 \ ATOM 78 CG2 ILE y 28 0.628 -40.924 -29.382 1.00 0.64 \ ATOM 79 CD1 ILE y 28 -0.640 -43.719 -28.595 1.00 0.64 \ ATOM 80 N GLY y 29 4.207 -41.103 -30.035 1.00 -1.50 \ ATOM 81 CA GLY y 29 5.116 -39.978 -29.894 1.00 -1.50 \ ATOM 82 C GLY y 29 5.821 -39.638 -31.193 1.00 -1.50 \ ATOM 83 O GLY y 29 6.092 -38.467 -31.471 1.00 -1.50 \ ATOM 84 N ILE y 30 6.117 -40.661 -31.996 1.00 0.64 \ ATOM 85 CA ILE y 30 6.889 -40.451 -33.228 1.00 0.64 \ ATOM 86 C ILE y 30 6.012 -39.922 -34.357 1.00 0.64 \ ATOM 87 O ILE y 30 6.487 -39.182 -35.230 1.00 0.64 \ ATOM 88 CB ILE y 30 7.736 -41.705 -33.623 1.00 0.64 \ ATOM 89 CG1 ILE y 30 8.932 -41.298 -34.497 1.00 0.64 \ ATOM 90 CG2 ILE y 30 6.881 -42.788 -34.285 1.00 0.64 \ ATOM 91 CD1 ILE y 30 9.824 -40.228 -33.873 1.00 0.64 \ ATOM 92 N ALA y 31 4.719 -40.268 -34.314 1.00 0.64 \ ATOM 93 CA ALA y 31 3.800 -39.946 -35.405 1.00 0.64 \ ATOM 94 C ALA y 31 3.775 -38.457 -35.776 1.00 0.64 \ ATOM 95 O ALA y 31 3.695 -38.108 -36.965 1.00 0.64 \ ATOM 96 CB ALA y 31 2.384 -40.422 -35.070 1.00 0.64 \ ATOM 97 N GLY y 32 3.821 -37.591 -34.754 1.00 0.64 \ ATOM 98 CA GLY y 32 3.746 -36.154 -34.950 1.00 0.64 \ ATOM 99 C GLY y 32 4.969 -35.625 -35.671 1.00 0.64 \ ATOM 100 O GLY y 32 4.839 -35.002 -36.717 1.00 0.64 \ ATOM 101 N PRO y 33 6.171 -35.858 -35.110 1.00 0.64 \ ATOM 102 CA PRO y 33 7.381 -35.483 -35.845 1.00 0.64 \ ATOM 103 C PRO y 33 7.476 -36.156 -37.230 1.00 0.64 \ ATOM 104 O PRO y 33 7.949 -35.532 -38.184 1.00 0.64 \ ATOM 105 CB PRO y 33 8.499 -35.954 -34.918 1.00 0.64 \ ATOM 106 CG PRO y 33 7.904 -35.786 -33.557 1.00 0.64 \ ATOM 107 CD PRO y 33 6.482 -36.231 -33.716 1.00 0.64 \ ATOM 108 N MET y 34 7.014 -37.398 -37.335 1.00 -1.50 \ ATOM 109 CA MET y 34 7.019 -38.120 -38.604 1.00 -1.50 \ ATOM 110 C MET y 34 6.252 -37.369 -39.699 1.00 -1.50 \ ATOM 111 O MET y 34 6.767 -37.218 -40.821 1.00 -1.50 \ ATOM 112 CB MET y 34 6.488 -39.551 -38.433 1.00 -1.50 \ ATOM 113 CG MET y 34 6.748 -40.496 -39.610 1.00 -1.50 \ ATOM 114 SD MET y 34 8.405 -40.302 -40.334 1.00 -1.50 \ ATOM 115 CE MET y 34 9.540 -40.535 -38.945 1.00 -1.50 \ ATOM 116 N ILE y 35 5.041 -36.903 -39.378 1.00 -1.50 \ ATOM 117 CA ILE y 35 4.247 -36.084 -40.302 1.00 -1.50 \ ATOM 118 C ILE y 35 5.041 -34.847 -40.762 1.00 -1.50 \ ATOM 119 O ILE y 35 5.098 -34.552 -41.963 1.00 -1.50 \ ATOM 120 CB ILE y 35 2.885 -35.675 -39.697 1.00 -1.50 \ ATOM 121 CG1 ILE y 35 2.059 -36.907 -39.327 1.00 -1.50 \ ATOM 122 CG2 ILE y 35 2.109 -34.767 -40.628 1.00 -1.50 \ ATOM 123 CD1 ILE y 35 0.978 -36.634 -38.286 1.00 -1.50 \ ATOM 124 N ILE y 36 5.679 -34.141 -39.826 1.00 0.64 \ ATOM 125 CA ILE y 36 6.478 -32.973 -40.201 1.00 0.64 \ ATOM 126 C ILE y 36 7.643 -33.376 -41.135 1.00 0.64 \ ATOM 127 O ILE y 36 7.862 -32.739 -42.176 1.00 0.64 \ ATOM 128 CB ILE y 36 6.987 -32.173 -38.986 1.00 0.64 \ ATOM 129 CG1 ILE y 36 5.831 -31.803 -38.045 1.00 0.64 \ ATOM 130 CG2 ILE y 36 7.668 -30.897 -39.442 1.00 0.64 \ ATOM 131 CD1 ILE y 36 4.606 -31.156 -38.698 1.00 0.64 \ ATOM 132 N PHE y 37 8.351 -34.443 -40.777 1.00 0.64 \ ATOM 133 CA PHE y 37 9.508 -34.914 -41.550 1.00 0.64 \ ATOM 134 C PHE y 37 9.108 -35.312 -42.960 1.00 0.64 \ ATOM 135 O PHE y 37 9.768 -34.903 -43.921 1.00 0.64 \ ATOM 136 CB PHE y 37 10.180 -36.102 -40.875 1.00 0.64 \ ATOM 137 CG PHE y 37 11.403 -36.572 -41.585 1.00 0.64 \ ATOM 138 CD1 PHE y 37 12.595 -35.861 -41.485 1.00 0.64 \ ATOM 139 CD2 PHE y 37 11.365 -37.719 -42.373 1.00 0.64 \ ATOM 140 CE1 PHE y 37 13.732 -36.295 -42.156 1.00 0.64 \ ATOM 141 CE2 PHE y 37 12.499 -38.157 -43.041 1.00 0.64 \ ATOM 142 CZ PHE y 37 13.683 -37.443 -42.937 1.00 0.64 \ ATOM 143 N LEU y 38 8.023 -36.084 -43.079 1.00 0.64 \ ATOM 144 CA LEU y 38 7.570 -36.540 -44.388 1.00 0.64 \ ATOM 145 C LEU y 38 7.219 -35.349 -45.277 1.00 0.64 \ ATOM 146 O LEU y 38 7.588 -35.321 -46.460 1.00 0.64 \ ATOM 147 CB LEU y 38 6.396 -37.521 -44.290 1.00 0.64 \ ATOM 148 CG LEU y 38 6.609 -38.914 -43.660 1.00 0.64 \ ATOM 149 CD1 LEU y 38 5.274 -39.626 -43.497 1.00 0.64 \ ATOM 150 CD2 LEU y 38 7.602 -39.788 -44.426 1.00 0.64 \ ATOM 151 N LEU y 39 6.525 -34.361 -44.712 1.00 0.64 \ ATOM 152 CA LEU y 39 6.165 -33.154 -45.471 1.00 0.64 \ ATOM 153 C LEU y 39 7.362 -32.309 -45.887 1.00 0.64 \ ATOM 154 O LEU y 39 7.389 -31.782 -46.996 1.00 0.64 \ ATOM 155 CB LEU y 39 5.121 -32.313 -44.725 1.00 0.64 \ ATOM 156 CG LEU y 39 3.760 -32.986 -44.766 1.00 0.64 \ ATOM 157 CD1 LEU y 39 2.779 -32.272 -43.836 1.00 0.64 \ ATOM 158 CD2 LEU y 39 3.281 -32.986 -46.218 1.00 0.64 \ ATOM 159 N ALA y 40 8.344 -32.187 -44.997 1.00 0.64 \ ATOM 160 CA ALA y 40 9.574 -31.445 -45.281 1.00 0.64 \ ATOM 161 C ALA y 40 10.379 -32.119 -46.396 1.00 0.64 \ ATOM 162 O ALA y 40 11.015 -31.439 -47.207 1.00 0.64 \ ATOM 163 CB ALA y 40 10.428 -31.341 -44.032 1.00 0.64 \ ATOM 164 N VAL y 41 10.366 -33.450 -46.406 1.00 -1.50 \ ATOM 165 CA VAL y 41 11.012 -34.225 -47.465 1.00 -1.50 \ ATOM 166 C VAL y 41 10.310 -34.036 -48.817 1.00 -1.50 \ ATOM 167 O VAL y 41 10.978 -33.919 -49.841 1.00 -1.50 \ ATOM 168 CB VAL y 41 11.137 -35.719 -47.086 1.00 -1.50 \ ATOM 169 CG1 VAL y 41 11.488 -36.562 -48.302 1.00 -1.50 \ ATOM 170 CG2 VAL y 41 12.199 -35.894 -46.010 1.00 -1.50 \ ATOM 171 N ARG y 42 8.977 -33.988 -48.813 1.00 0.64 \ ATOM 172 CA ARG y 42 8.186 -33.782 -50.035 1.00 0.64 \ ATOM 173 C ARG y 42 7.961 -32.315 -50.410 1.00 0.64 \ ATOM 174 O ARG y 42 7.096 -32.027 -51.248 1.00 0.64 \ ATOM 175 CB ARG y 42 6.803 -34.409 -49.884 1.00 0.64 \ ATOM 176 CG ARG y 42 6.786 -35.898 -49.642 1.00 0.64 \ ATOM 177 CD ARG y 42 5.346 -36.349 -49.544 1.00 0.64 \ ATOM 178 NE ARG y 42 5.228 -37.770 -49.236 1.00 0.64 \ ATOM 179 CZ ARG y 42 4.115 -38.478 -49.412 1.00 0.64 \ ATOM 180 NH1 ARG y 42 4.104 -39.769 -49.105 1.00 0.64 \ ATOM 181 NH2 ARG y 42 3.014 -37.900 -49.899 1.00 0.64 \ ATOM 182 N ARG y 43 8.689 -31.391 -49.783 1.00 -1.50 \ ATOM 183 CA ARG y 43 8.414 -29.954 -49.929 1.00 -1.50 \ ATOM 184 C ARG y 43 6.910 -29.648 -49.914 1.00 -1.50 \ ATOM 185 O ARG y 43 6.399 -28.882 -50.740 1.00 -1.50 \ ATOM 186 CB ARG y 43 9.080 -29.378 -51.189 1.00 -1.50 \ ATOM 187 CG ARG y 43 10.576 -29.175 -51.040 1.00 -1.50 \ ATOM 188 CD ARG y 43 11.225 -28.992 -52.402 1.00 -1.50 \ ATOM 189 NE ARG y 43 12.668 -28.795 -52.296 1.00 -1.50 \ ATOM 190 CZ ARG y 43 13.540 -29.090 -53.261 1.00 -1.50 \ ATOM 191 NH1 ARG y 43 13.118 -29.603 -54.410 1.00 -1.50 \ ATOM 192 NH2 ARG y 43 14.841 -28.873 -53.069 1.00 -1.50 \ ATOM 193 N GLY y 44 6.211 -30.249 -48.952 1.00 0.64 \ ATOM 194 CA GLY y 44 4.768 -30.078 -48.820 1.00 0.64 \ ATOM 195 C GLY y 44 4.432 -28.731 -48.215 1.00 0.64 \ ATOM 196 O GLY y 44 5.327 -27.918 -47.912 1.00 0.64 \ ATOM 197 N ASN y 45 3.136 -28.499 -48.029 1.00 -1.50 \ ATOM 198 CA ASN y 45 2.668 -27.213 -47.614 1.00 -1.50 \ ATOM 199 C ASN y 45 2.755 -26.929 -46.099 1.00 -1.50 \ ATOM 200 O ASN y 45 1.728 -26.646 -45.462 1.00 -1.50 \ ATOM 201 CB ASN y 45 1.242 -27.012 -48.105 1.00 -1.50 \ ATOM 202 CG ASN y 45 0.948 -25.574 -48.413 1.00 -1.50 \ ATOM 203 OD1 ASN y 45 1.861 -24.771 -48.640 1.00 -1.50 \ ATOM 204 ND2 ASN y 45 -0.326 -25.229 -48.428 1.00 -1.50 \ ATOM 205 N LEU y 46 3.976 -26.961 -45.553 1.00 0.64 \ ATOM 206 CA LEU y 46 4.213 -26.672 -44.131 1.00 0.64 \ ATOM 207 C LEU y 46 3.943 -25.217 -43.822 1.00 0.64 \ ATOM 208 O LEU y 46 3.754 -24.862 -42.653 1.00 0.64 \ ATOM 209 CB LEU y 46 5.644 -27.043 -43.705 1.00 0.64 \ ATOM 210 CG LEU y 46 6.012 -28.528 -43.697 1.00 0.64 \ ATOM 211 CD1 LEU y 46 7.452 -28.756 -43.277 1.00 0.64 \ ATOM 212 CD2 LEU y 46 5.072 -29.290 -42.767 1.00 0.64 \ ATOM 213 OXT LEU y 46 3.898 -24.367 -44.725 1.00 0.64 \ """, "e5b66y1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5b66y1_csv", state=0, origin=1) cmd.zoom("e5b66y1_csv", animate=-1)