cmd.read_pdbstr("""\ ATOM 1 N MET A 49 -11.724 -6.938 9.178 1.00 0.72 \ ATOM 2 CA MET A 49 -11.328 -8.148 8.474 1.00 0.72 \ ATOM 3 C MET A 49 -10.518 -7.785 7.232 1.00 0.72 \ ATOM 4 O MET A 49 -9.549 -8.463 6.889 1.00 0.72 \ ATOM 5 CB MET A 49 -12.550 -8.980 8.084 1.00 0.72 \ ATOM 6 CG MET A 49 -12.227 -10.412 7.658 1.00 0.72 \ ATOM 7 SD MET A 49 -11.343 -11.343 8.933 1.00 0.72 \ ATOM 8 CE MET A 49 -11.368 -12.985 8.207 1.00 0.72 \ ATOM 9 N ASP A 50 -10.905 -6.697 6.576 1.00 -0.80 \ ATOM 10 CA ASP A 50 -10.248 -6.303 5.344 1.00 -0.80 \ ATOM 11 C ASP A 50 -8.807 -5.871 5.611 1.00 -0.80 \ ATOM 12 O ASP A 50 -7.906 -6.195 4.848 1.00 -0.80 \ ATOM 13 CB ASP A 50 -11.007 -5.180 4.648 1.00 -0.80 \ ATOM 14 CG ASP A 50 -10.365 -4.794 3.337 1.00 -0.80 \ ATOM 15 OD1 ASP A 50 -10.356 -5.635 2.421 1.00 -0.80 \ ATOM 16 OD2 ASP A 50 -9.843 -3.668 3.231 1.00 -0.80 \ ATOM 17 N GLN A 51 -8.594 -5.137 6.694 1.00 -1.04 \ ATOM 18 CA GLN A 51 -7.243 -4.758 7.087 1.00 -1.04 \ ATOM 19 C GLN A 51 -6.400 -6.007 7.307 1.00 -1.04 \ ATOM 20 O GLN A 51 -5.258 -6.095 6.869 1.00 -1.04 \ ATOM 21 CB GLN A 51 -7.270 -3.917 8.358 1.00 -1.04 \ ATOM 22 CG GLN A 51 -7.882 -2.549 8.163 1.00 -1.04 \ ATOM 23 CD GLN A 51 -7.037 -1.671 7.261 1.00 -1.04 \ ATOM 24 OE1 GLN A 51 -7.513 -1.154 6.250 1.00 -1.04 \ ATOM 25 NE2 GLN A 51 -5.772 -1.508 7.618 1.00 -1.04 \ ATOM 26 N ILE A 52 -6.999 -6.977 7.979 1.00 0.65 \ ATOM 27 CA ILE A 52 -6.316 -8.215 8.314 1.00 0.65 \ ATOM 28 C ILE A 52 -5.970 -8.992 7.050 1.00 0.65 \ ATOM 29 O ILE A 52 -4.881 -9.554 6.944 1.00 0.65 \ ATOM 30 CB ILE A 52 -7.183 -9.064 9.262 1.00 0.65 \ ATOM 31 CG1 ILE A 52 -7.255 -8.375 10.625 1.00 0.65 \ ATOM 32 CG2 ILE A 52 -6.621 -10.482 9.426 1.00 0.65 \ ATOM 33 CD1 ILE A 52 -8.207 -9.017 11.600 1.00 0.65 \ ATOM 34 N MET A 53 -6.887 -8.989 6.086 1.00 -0.47 \ ATOM 35 CA MET A 53 -6.731 -9.766 4.858 1.00 -0.47 \ ATOM 36 C MET A 53 -5.910 -9.056 3.779 1.00 -0.47 \ ATOM 37 O MET A 53 -5.685 -9.625 2.717 1.00 -0.47 \ ATOM 38 CB MET A 53 -8.107 -10.115 4.284 1.00 -0.47 \ ATOM 39 CG MET A 53 -8.933 -11.047 5.152 1.00 -0.47 \ ATOM 40 SD MET A 53 -8.324 -12.741 5.162 1.00 -0.47 \ ATOM 41 CE MET A 53 -8.613 -13.214 3.457 1.00 -0.47 \ ATOM 42 N THR A 54 -5.477 -7.822 4.038 1.00 -0.49 \ ATOM 43 CA THR A 54 -4.666 -7.081 3.068 1.00 -0.49 \ ATOM 44 C THR A 54 -3.267 -6.786 3.610 1.00 -0.49 \ ATOM 45 O THR A 54 -2.558 -5.934 3.080 1.00 -0.49 \ ATOM 46 CB THR A 54 -5.350 -5.751 2.653 1.00 -0.49 \ ATOM 47 OG1 THR A 54 -5.624 -4.948 3.810 1.00 -0.49 \ ATOM 48 CG2 THR A 54 -6.647 -6.038 1.913 1.00 -0.49 \ ATOM 49 N GLY A 55 -2.875 -7.501 4.661 1.00 0.51 \ ATOM 50 CA GLY A 55 -1.540 -7.381 5.223 1.00 0.51 \ ATOM 51 C GLY A 55 -1.272 -6.048 5.897 1.00 0.51 \ ATOM 52 O GLY A 55 -0.118 -5.649 6.059 1.00 0.51 \ ATOM 53 N ASN A 56 -2.339 -5.370 6.309 1.00 -0.87 \ ATOM 54 CA ASN A 56 -2.240 -4.033 6.891 1.00 -0.87 \ ATOM 55 C ASN A 56 -2.443 -4.018 8.399 1.00 -0.87 \ ATOM 56 O ASN A 56 -2.469 -2.953 9.014 1.00 -0.87 \ ATOM 57 CB ASN A 56 -3.260 -3.109 6.220 1.00 -0.87 \ ATOM 58 CG ASN A 56 -2.760 -2.552 4.904 1.00 -0.87 \ ATOM 59 OD1 ASN A 56 -1.717 -1.901 4.853 1.00 -0.87 \ ATOM 60 ND2 ASN A 56 -3.497 -2.813 3.829 1.00 -0.87 \ ATOM 61 N ALA A 57 -2.577 -5.205 8.989 1.00 0.05 \ ATOM 62 CA ALA A 57 -2.757 -5.344 10.429 1.00 0.05 \ ATOM 63 C ALA A 57 -1.516 -5.958 11.065 1.00 0.05 \ ATOM 64 O ALA A 57 -1.013 -6.979 10.594 1.00 0.05 \ ATOM 65 CB ALA A 57 -3.981 -6.199 10.732 1.00 0.05 \ ATOM 66 N ARG A 58 -1.024 -5.327 12.127 1.00 -0.40 \ ATOM 67 CA ARG A 58 0.053 -5.897 12.927 1.00 -0.40 \ ATOM 68 C ARG A 58 -0.462 -7.118 13.682 1.00 -0.40 \ ATOM 69 O ARG A 58 -1.641 -7.173 14.033 1.00 -0.40 \ ATOM 70 CB ARG A 58 0.601 -4.865 13.917 1.00 -0.40 \ ATOM 71 CG ARG A 58 1.172 -3.614 13.270 1.00 -0.40 \ ATOM 72 CD ARG A 58 2.587 -3.844 12.778 1.00 -0.40 \ ATOM 73 NE ARG A 58 3.498 -4.109 13.887 1.00 -0.40 \ ATOM 74 CZ ARG A 58 4.804 -4.320 13.757 1.00 -0.40 \ ATOM 75 NH1 ARG A 58 5.372 -4.294 12.558 1.00 -0.40 \ ATOM 76 NH2 ARG A 58 5.546 -4.555 14.833 1.00 -0.40 \ ATOM 77 N PRO A 59 0.418 -8.097 13.942 1.00 -0.16 \ ATOM 78 CA PRO A 59 -0.011 -9.263 14.720 1.00 -0.16 \ ATOM 79 C PRO A 59 -0.747 -8.879 16.008 1.00 -0.16 \ ATOM 80 O PRO A 59 -1.780 -9.465 16.309 1.00 -0.16 \ ATOM 81 CB PRO A 59 1.307 -9.980 15.021 1.00 -0.16 \ ATOM 82 CG PRO A 59 2.179 -9.637 13.853 1.00 -0.16 \ ATOM 83 CD PRO A 59 1.814 -8.224 13.481 1.00 -0.16 \ ATOM 84 N ALA A 60 -0.250 -7.885 16.738 1.00 -0.51 \ ATOM 85 CA ALA A 60 -0.915 -7.458 17.963 1.00 -0.51 \ ATOM 86 C ALA A 60 -2.326 -6.941 17.698 1.00 -0.51 \ ATOM 87 O ALA A 60 -3.232 -7.154 18.503 1.00 -0.51 \ ATOM 88 CB ALA A 60 -0.086 -6.384 18.674 1.00 -0.51 \ ATOM 89 N GLN A 61 -2.512 -6.257 16.574 1.00 -0.39 \ ATOM 90 CA GLN A 61 -3.832 -5.761 16.200 1.00 -0.39 \ ATOM 91 C GLN A 61 -4.755 -6.927 15.842 1.00 -0.39 \ ATOM 92 O GLN A 61 -5.905 -6.976 16.277 1.00 -0.39 \ ATOM 93 CB GLN A 61 -3.728 -4.770 15.036 1.00 -0.39 \ ATOM 94 CG GLN A 61 -2.980 -3.492 15.425 1.00 -0.39 \ ATOM 95 CD GLN A 61 -2.579 -2.636 14.241 1.00 -0.39 \ ATOM 96 OE1 GLN A 61 -2.390 -3.129 13.126 1.00 -0.39 \ ATOM 97 NE2 GLN A 61 -2.431 -1.339 14.483 1.00 -0.39 \ ATOM 98 N ILE A 62 -4.246 -7.876 15.065 1.00 0.27 \ ATOM 99 CA ILE A 62 -5.038 -9.045 14.707 1.00 0.27 \ ATOM 100 C ILE A 62 -5.487 -9.773 15.964 1.00 0.27 \ ATOM 101 O ILE A 62 -6.660 -10.118 16.107 1.00 0.27 \ ATOM 102 CB ILE A 62 -4.256 -10.028 13.810 1.00 0.27 \ ATOM 103 CG1 ILE A 62 -3.760 -9.325 12.545 1.00 0.27 \ ATOM 104 CG2 ILE A 62 -5.135 -11.210 13.441 1.00 0.27 \ ATOM 105 CD1 ILE A 62 -2.853 -10.176 11.675 1.00 0.27 \ ATOM 106 N ALA A 63 -4.544 -9.993 16.880 1.00 2.92 \ ATOM 107 CA ALA A 63 -4.829 -10.716 18.111 1.00 2.92 \ ATOM 108 C ALA A 63 -5.824 -9.973 18.991 1.00 2.92 \ ATOM 109 O ALA A 63 -6.731 -10.583 19.543 1.00 2.92 \ ATOM 110 CB ALA A 63 -3.545 -10.979 18.875 1.00 2.92 \ ATOM 111 N ALA A 64 -5.649 -8.661 19.138 1.00 2.15 \ ATOM 112 CA ALA A 64 -6.565 -7.873 19.952 1.00 2.15 \ ATOM 113 C ALA A 64 -7.986 -7.951 19.409 1.00 2.15 \ ATOM 114 O ALA A 64 -8.951 -8.047 20.169 1.00 2.15 \ ATOM 115 CB ALA A 64 -6.104 -6.424 20.017 1.00 2.15 \ ATOM 116 N PHE A 65 -8.112 -7.919 18.086 1.00 1.04 \ ATOM 117 CA PHE A 65 -9.418 -7.978 17.449 1.00 1.04 \ ATOM 118 C PHE A 65 -10.050 -9.351 17.635 1.00 1.04 \ ATOM 119 O PHE A 65 -11.230 -9.465 17.985 1.00 1.04 \ ATOM 120 CB PHE A 65 -9.312 -7.663 15.959 1.00 1.04 \ ATOM 121 CG PHE A 65 -10.630 -7.706 15.247 1.00 1.04 \ ATOM 122 CD1 PHE A 65 -11.556 -6.688 15.419 1.00 1.04 \ ATOM 123 CD2 PHE A 65 -10.951 -8.764 14.412 1.00 1.04 \ ATOM 124 CE1 PHE A 65 -12.766 -6.728 14.776 1.00 1.04 \ ATOM 125 CE2 PHE A 65 -12.166 -8.811 13.766 1.00 1.04 \ ATOM 126 CZ PHE A 65 -13.075 -7.791 13.936 1.00 1.04 \ ATOM 127 N ALA A 66 -9.252 -10.387 17.405 1.00 0.52 \ ATOM 128 CA ALA A 66 -9.734 -11.759 17.538 1.00 0.52 \ ATOM 129 C ALA A 66 -10.300 -11.974 18.935 1.00 0.52 \ ATOM 130 O ALA A 66 -11.409 -12.482 19.091 1.00 0.52 \ ATOM 131 CB ALA A 66 -8.614 -12.755 17.244 1.00 0.52 \ ATOM 132 N VAL A 67 -9.549 -11.552 19.951 1.00 0.98 \ ATOM 133 CA VAL A 67 -9.967 -11.744 21.335 1.00 0.98 \ ATOM 134 C VAL A 67 -11.166 -10.876 21.693 1.00 0.98 \ ATOM 135 O VAL A 67 -12.123 -11.357 22.292 1.00 0.98 \ ATOM 136 CB VAL A 67 -8.807 -11.442 22.311 1.00 0.98 \ ATOM 137 CG1 VAL A 67 -9.290 -11.439 23.764 1.00 0.98 \ ATOM 138 CG2 VAL A 67 -7.704 -12.460 22.133 1.00 0.98 \ ATOM 139 N ALA A 68 -11.112 -9.596 21.327 1.00 1.36 \ ATOM 140 CA ALA A 68 -12.196 -8.677 21.652 1.00 1.36 \ ATOM 141 C ALA A 68 -13.503 -9.099 20.985 1.00 1.36 \ ATOM 142 O ALA A 68 -14.565 -9.088 21.613 1.00 1.36 \ ATOM 143 CB ALA A 68 -11.830 -7.257 21.246 1.00 1.36 \ ATOM 144 N MET A 69 -13.428 -9.476 19.714 1.00 0.30 \ ATOM 145 CA MET A 69 -14.614 -9.939 19.002 1.00 0.30 \ ATOM 146 C MET A 69 -15.174 -11.215 19.623 1.00 0.30 \ ATOM 147 O MET A 69 -16.364 -11.492 19.512 1.00 0.30 \ ATOM 148 CB MET A 69 -14.306 -10.202 17.526 1.00 0.30 \ ATOM 149 CG MET A 69 -15.515 -10.693 16.743 1.00 0.30 \ ATOM 150 SD MET A 69 -16.912 -9.577 16.934 1.00 0.30 \ ATOM 151 CE MET A 69 -16.215 -8.186 16.110 1.00 0.30 \ ATOM 152 N THR A 70 -14.313 -11.998 20.262 1.00 -0.71 \ ATOM 153 CA THR A 70 -14.749 -13.253 20.872 1.00 -0.71 \ ATOM 154 C THR A 70 -15.410 -13.008 22.232 1.00 -0.71 \ ATOM 155 O THR A 70 -16.443 -13.598 22.553 1.00 -0.71 \ ATOM 156 CB THR A 70 -13.570 -14.231 21.044 1.00 -0.71 \ ATOM 157 OG1 THR A 70 -13.029 -14.548 19.754 1.00 -0.71 \ ATOM 158 CG2 THR A 70 -14.021 -15.523 21.718 1.00 -0.71 \ ATOM 159 N MET A 71 -14.814 -12.131 23.033 1.00 -0.54 \ ATOM 160 CA MET A 71 -15.309 -11.907 24.387 1.00 -0.54 \ ATOM 161 C MET A 71 -16.531 -11.006 24.405 1.00 -0.54 \ ATOM 162 O MET A 71 -17.365 -11.100 25.308 1.00 -0.54 \ ATOM 163 CB MET A 71 -14.197 -11.325 25.253 1.00 -0.54 \ ATOM 164 CG MET A 71 -13.082 -12.333 25.465 1.00 -0.54 \ ATOM 165 SD MET A 71 -11.862 -11.823 26.677 1.00 -0.54 \ ATOM 166 CE MET A 71 -12.828 -11.884 28.170 1.00 -0.54 \ ATOM 167 N LYS A 72 -16.622 -10.122 23.416 1.00 0.35 \ ATOM 168 CA LYS A 72 -17.862 -9.421 23.123 1.00 0.35 \ ATOM 169 C LYS A 72 -18.593 -10.316 22.141 1.00 0.35 \ ATOM 170 O LYS A 72 -18.314 -10.267 20.948 1.00 0.35 \ ATOM 171 CB LYS A 72 -17.602 -8.032 22.523 1.00 0.35 \ ATOM 172 CG LYS A 72 -18.797 -7.064 22.538 1.00 0.35 \ ATOM 173 CD LYS A 72 -19.963 -7.492 21.655 1.00 0.35 \ ATOM 174 CE LYS A 72 -19.621 -7.455 20.169 1.00 0.35 \ ATOM 175 NZ LYS A 72 -20.678 -8.139 19.359 1.00 0.35 \ ATOM 176 N ALA A 73 -19.509 -11.134 22.648 1.00 0.27 \ ATOM 177 CA ALA A 73 -20.142 -12.187 21.845 1.00 0.27 \ ATOM 178 C ALA A 73 -20.537 -11.680 20.452 1.00 0.27 \ ATOM 179 O ALA A 73 -21.288 -10.717 20.343 1.00 0.27 \ ATOM 180 CB ALA A 73 -21.355 -12.735 22.569 1.00 0.27 \ ATOM 181 N PRO A 74 -20.002 -12.307 19.388 1.00 0.56 \ ATOM 182 CA PRO A 74 -20.268 -11.818 18.029 1.00 0.56 \ ATOM 183 C PRO A 74 -21.706 -12.037 17.554 1.00 0.56 \ ATOM 184 O PRO A 74 -22.333 -13.040 17.877 1.00 0.56 \ ATOM 185 CB PRO A 74 -19.284 -12.621 17.171 1.00 0.56 \ ATOM 186 CG PRO A 74 -19.008 -13.848 17.955 1.00 0.56 \ ATOM 187 CD PRO A 74 -19.050 -13.433 19.383 1.00 0.56 \ ATOM 188 N THR A 75 -22.212 -11.076 16.786 1.00 -0.35 \ ATOM 189 CA THR A 75 -23.553 -11.149 16.218 1.00 -0.35 \ ATOM 190 C THR A 75 -23.512 -11.779 14.830 1.00 -0.35 \ ATOM 191 O THR A 75 -22.452 -11.833 14.208 1.00 -0.35 \ ATOM 192 CB THR A 75 -24.184 -9.756 16.107 1.00 -0.35 \ ATOM 193 OG1 THR A 75 -23.531 -9.026 15.064 1.00 -0.35 \ ATOM 194 CG2 THR A 75 -24.053 -8.990 17.434 1.00 -0.35 \ ATOM 195 N ALA A 76 -24.662 -12.246 14.345 1.00 -1.13 \ ATOM 196 CA ALA A 76 -24.754 -12.810 13.001 1.00 -1.13 \ ATOM 197 C ALA A 76 -24.342 -11.780 11.948 1.00 -1.13 \ ATOM 198 O ALA A 76 -23.686 -12.115 10.959 1.00 -1.13 \ ATOM 199 CB ALA A 76 -26.160 -13.307 12.731 1.00 -1.13 \ ATOM 200 N ASP A 77 -24.721 -10.520 12.159 1.00 -0.64 \ ATOM 201 CA ASP A 77 -24.334 -9.458 11.229 1.00 -0.64 \ ATOM 202 C ASP A 77 -22.816 -9.343 11.150 1.00 -0.64 \ ATOM 203 O ASP A 77 -22.241 -9.212 10.067 1.00 -0.64 \ ATOM 204 CB ASP A 77 -24.923 -8.109 11.656 1.00 -0.64 \ ATOM 205 CG ASP A 77 -26.359 -7.915 11.203 1.00 -0.64 \ ATOM 206 OD1 ASP A 77 -27.000 -8.897 10.770 1.00 -0.64 \ ATOM 207 OD2 ASP A 77 -26.852 -6.767 11.293 1.00 -0.64 \ ATOM 208 N GLU A 78 -22.176 -9.389 12.311 1.00 3.41 \ ATOM 209 CA GLU A 78 -20.732 -9.217 12.404 1.00 3.41 \ ATOM 210 C GLU A 78 -20.005 -10.411 11.793 1.00 3.41 \ ATOM 211 O GLU A 78 -19.070 -10.245 11.010 1.00 3.41 \ ATOM 212 CB GLU A 78 -20.316 -9.016 13.866 1.00 3.41 \ ATOM 213 CG GLU A 78 -20.701 -7.633 14.419 1.00 3.41 \ ATOM 214 CD GLU A 78 -20.649 -7.545 15.940 1.00 3.41 \ ATOM 215 OE1 GLU A 78 -20.458 -8.587 16.605 1.00 3.41 \ ATOM 216 OE2 GLU A 78 -20.798 -6.422 16.472 1.00 3.41 \ ATOM 217 N VAL A 79 -20.449 -11.615 12.132 1.00 0.17 \ ATOM 218 CA VAL A 79 -19.811 -12.807 11.594 1.00 0.17 \ ATOM 219 C VAL A 79 -19.997 -12.834 10.074 1.00 0.17 \ ATOM 220 O VAL A 79 -19.074 -13.153 9.338 1.00 0.17 \ ATOM 221 CB VAL A 79 -20.369 -14.090 12.242 1.00 0.17 \ ATOM 222 CG1 VAL A 79 -19.760 -15.330 11.594 1.00 0.17 \ ATOM 223 CG2 VAL A 79 -20.079 -14.076 13.738 1.00 0.17 \ ATOM 224 N GLY A 80 -21.193 -12.480 9.614 1.00 -0.86 \ ATOM 225 CA GLY A 80 -21.469 -12.361 8.192 1.00 -0.86 \ ATOM 226 C GLY A 80 -20.527 -11.397 7.478 1.00 -0.86 \ ATOM 227 O GLY A 80 -20.098 -11.673 6.368 1.00 -0.86 \ ATOM 228 N GLU A 81 -20.197 -10.271 8.112 1.00 -1.03 \ ATOM 229 CA GLU A 81 -19.278 -9.307 7.510 1.00 -1.03 \ ATOM 230 C GLU A 81 -17.860 -9.872 7.410 1.00 -1.03 \ ATOM 231 O GLU A 81 -17.182 -9.691 6.394 1.00 -1.03 \ ATOM 232 CB GLU A 81 -19.268 -7.992 8.302 1.00 -1.03 \ ATOM 233 CG GLU A 81 -20.462 -7.082 8.015 1.00 -1.03 \ ATOM 234 CD GLU A 81 -20.311 -5.679 8.600 1.00 -1.03 \ ATOM 235 OE1 GLU A 81 -19.207 -5.327 9.068 1.00 -1.03 \ ATOM 236 OE2 GLU A 81 -21.303 -4.920 8.585 1.00 -1.03 \ """, "e5bo3A1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5bo3A1_csv", state=0, origin=1) cmd.zoom("e5bo3A1_csv", animate=-1)