cmd.read_pdbstr("""\ ATOM 1 N PHE L 1 8.556 9.952 -5.482 1.00 -1.00 \ ATOM 2 CA PHE L 1 7.289 10.803 -5.521 1.00 -1.00 \ ATOM 3 C PHE L 1 6.349 10.246 -4.495 1.00 -1.00 \ ATOM 4 O PHE L 1 6.260 9.042 -4.285 1.00 -1.00 \ ATOM 5 CB PHE L 1 6.633 10.769 -6.916 1.00 -1.00 \ ATOM 6 CG PHE L 1 5.706 11.929 -7.183 1.00 -1.00 \ ATOM 7 CD1 PHE L 1 6.225 13.145 -7.608 1.00 -1.00 \ ATOM 8 CD2 PHE L 1 4.306 11.820 -6.964 1.00 -1.00 \ ATOM 9 CE1 PHE L 1 5.431 14.217 -7.826 1.00 -1.00 \ ATOM 10 CE2 PHE L 1 3.512 12.899 -7.188 1.00 -1.00 \ ATOM 11 CZ PHE L 1 4.049 14.094 -7.592 1.00 -1.00 \ ATOM 12 N VAL L 2 5.555 11.150 -3.936 1.00 -1.00 \ ATOM 13 CA VAL L 2 4.635 10.764 -2.844 1.00 -1.00 \ ATOM 14 C VAL L 2 3.385 9.974 -3.224 1.00 -1.00 \ ATOM 15 O VAL L 2 2.349 10.169 -2.620 1.00 -1.00 \ ATOM 16 CB VAL L 2 4.306 11.998 -1.992 1.00 -1.00 \ ATOM 17 CG1 VAL L 2 5.590 12.510 -1.324 1.00 -1.00 \ ATOM 18 CG2 VAL L 2 3.612 13.087 -2.719 1.00 -1.00 \ ATOM 19 N ASN L 3 3.486 9.064 -4.187 1.00 -0.46 \ ATOM 20 CA ASN L 3 2.301 8.308 -4.632 1.00 -0.46 \ ATOM 21 C ASN L 3 1.637 7.555 -3.493 1.00 -0.46 \ ATOM 22 O ASN L 3 0.381 7.529 -3.437 1.00 -0.46 \ ATOM 23 CB ASN L 3 2.675 7.314 -5.761 1.00 -0.46 \ ATOM 24 CG ASN L 3 2.965 8.012 -7.077 1.00 -0.46 \ ATOM 25 OD1 ASN L 3 2.172 8.810 -7.522 1.00 -0.46 \ ATOM 26 ND2 ASN L 3 4.133 7.695 -7.709 1.00 -0.46 \ ATOM 27 N GLN L 4 2.381 6.875 -2.623 1.00 0.23 \ ATOM 28 CA GLN L 4 1.733 6.050 -1.576 1.00 0.23 \ ATOM 29 C GLN L 4 1.019 7.028 -0.598 1.00 0.23 \ ATOM 30 O GLN L 4 -0.066 6.696 -0.134 1.00 0.23 \ ATOM 31 CB GLN L 4 2.779 5.248 -0.790 1.00 0.23 \ ATOM 32 CG GLN L 4 2.214 4.400 0.352 1.00 0.23 \ ATOM 33 CD GLN L 4 3.274 3.426 0.887 1.00 0.23 \ ATOM 34 OE1 GLN L 4 3.883 2.658 0.109 1.00 0.23 \ ATOM 35 NE2 GLN L 4 3.501 3.448 2.199 1.00 0.23 \ ATOM 36 N HIS L 5 1.597 8.172 -0.313 1.00 -0.05 \ ATOM 37 CA HIS L 5 0.990 9.189 0.604 1.00 -0.05 \ ATOM 38 C HIS L 5 -0.318 9.666 0.018 1.00 -0.05 \ ATOM 39 O HIS L 5 -1.350 9.743 0.736 1.00 -0.05 \ ATOM 40 CB HIS L 5 1.915 10.364 0.915 1.00 -0.05 \ ATOM 41 CG HIS L 5 1.279 11.477 1.746 1.00 -0.05 \ ATOM 42 ND1 HIS L 5 1.180 11.405 3.115 1.00 -0.05 \ ATOM 43 CD2 HIS L 5 0.612 12.624 1.395 1.00 -0.05 \ ATOM 44 CE1 HIS L 5 0.538 12.471 3.576 1.00 -0.05 \ ATOM 45 NE2 HIS L 5 0.174 13.213 2.556 1.00 -0.05 \ ATOM 46 N LEU L 6 -0.339 9.935 -1.259 1.00 1.11 \ ATOM 47 CA LEU L 6 -1.563 10.450 -1.935 1.00 1.11 \ ATOM 48 C LEU L 6 -2.621 9.355 -1.907 1.00 1.11 \ ATOM 49 O LEU L 6 -3.785 9.638 -1.541 1.00 1.11 \ ATOM 50 CB LEU L 6 -1.275 10.956 -3.345 1.00 1.11 \ ATOM 51 CG LEU L 6 -0.245 12.091 -3.478 1.00 1.11 \ ATOM 52 CD1 LEU L 6 -0.023 12.388 -4.969 1.00 1.11 \ ATOM 53 CD2 LEU L 6 -0.598 13.315 -2.645 1.00 1.11 \ ATOM 54 N CYS L 7 -2.275 8.116 -2.218 1.00 1.72 \ ATOM 55 CA CYS L 7 -3.197 7.048 -2.182 1.00 1.72 \ ATOM 56 C CYS L 7 -3.825 6.917 -0.776 1.00 1.72 \ ATOM 57 O CYS L 7 -5.048 6.784 -0.627 1.00 1.72 \ ATOM 58 CB CYS L 7 -2.537 5.727 -2.638 1.00 1.72 \ ATOM 59 SG CYS L 7 -3.634 4.296 -2.409 1.00 1.72 \ ATOM 60 N GLY L 8 -2.996 6.924 0.266 1.00 0.65 \ ATOM 61 CA GLY L 8 -3.491 6.739 1.638 1.00 0.65 \ ATOM 62 C GLY L 8 -4.515 7.769 2.040 1.00 0.65 \ ATOM 63 O GLY L 8 -5.408 7.462 2.828 1.00 0.65 \ ATOM 64 N SER L 9 -4.354 9.001 1.594 1.00 -0.48 \ ATOM 65 CA SER L 9 -5.291 10.088 1.899 1.00 -0.48 \ ATOM 66 C SER L 9 -6.678 9.695 1.429 1.00 -0.48 \ ATOM 67 O SER L 9 -7.681 9.815 2.136 1.00 -0.48 \ ATOM 68 CB SER L 9 -4.844 11.373 1.234 1.00 -0.48 \ ATOM 69 OG SER L 9 -5.777 12.345 1.454 1.00 -0.48 \ ATOM 70 N HIS L 10 -6.747 9.200 0.202 1.00 -0.22 \ ATOM 71 CA HIS L 10 -8.019 8.773 -0.343 1.00 -0.22 \ ATOM 72 C HIS L 10 -8.496 7.471 0.314 1.00 -0.22 \ ATOM 73 O HIS L 10 -9.733 7.259 0.492 1.00 -0.22 \ ATOM 74 CB HIS L 10 -7.887 8.586 -1.864 1.00 -0.22 \ ATOM 75 CG HIS L 10 -7.674 9.874 -2.586 1.00 -0.22 \ ATOM 76 ND1 HIS L 10 -8.713 10.614 -3.058 1.00 -0.22 \ ATOM 77 CD2 HIS L 10 -6.549 10.556 -2.905 1.00 -0.22 \ ATOM 78 CE1 HIS L 10 -8.255 11.740 -3.583 1.00 -0.22 \ ATOM 79 NE2 HIS L 10 -6.945 11.707 -3.505 1.00 -0.22 \ ATOM 80 N LEU L 11 -7.577 6.566 0.642 1.00 1.72 \ ATOM 81 CA LEU L 11 -7.974 5.303 1.323 1.00 1.72 \ ATOM 82 C LEU L 11 -8.664 5.560 2.654 1.00 1.72 \ ATOM 83 O LEU L 11 -9.691 4.935 3.005 1.00 1.72 \ ATOM 84 CB LEU L 11 -6.796 4.364 1.555 1.00 1.72 \ ATOM 85 CG LEU L 11 -6.457 3.238 0.621 1.00 1.72 \ ATOM 86 CD1 LEU L 11 -5.181 2.599 1.159 1.00 1.72 \ ATOM 87 CD2 LEU L 11 -7.647 2.253 0.545 1.00 1.72 \ ATOM 88 N VAL L 12 -8.105 6.474 3.469 1.00 0.65 \ ATOM 89 CA VAL L 12 -8.754 6.754 4.769 1.00 0.65 \ ATOM 90 C VAL L 12 -10.127 7.374 4.582 1.00 0.65 \ ATOM 91 O VAL L 12 -11.036 7.085 5.378 1.00 0.65 \ ATOM 92 CB VAL L 12 -7.878 7.564 5.744 1.00 0.65 \ ATOM 93 CG1 VAL L 12 -6.599 6.786 6.072 1.00 0.65 \ ATOM 94 CG2 VAL L 12 -7.594 8.894 5.318 1.00 0.65 \ ATOM 95 N GLU L 13 -10.315 8.224 3.566 1.00 0.69 \ ATOM 96 CA GLU L 13 -11.662 8.750 3.299 1.00 0.69 \ ATOM 97 C GLU L 13 -12.635 7.612 2.929 1.00 0.69 \ ATOM 98 O GLU L 13 -13.794 7.633 3.350 1.00 0.69 \ ATOM 99 CB GLU L 13 -11.636 9.840 2.214 1.00 0.69 \ ATOM 100 CG GLU L 13 -13.012 10.302 1.767 1.00 0.69 \ ATOM 101 CD GLU L 13 -13.930 10.937 2.791 0.50 0.69 \ ATOM 102 OE1 GLU L 13 -15.141 10.989 2.456 0.50 0.69 \ ATOM 103 OE2 GLU L 13 -13.476 11.465 3.811 0.50 0.69 \ ATOM 104 N ALA L 14 -12.123 6.676 2.132 1.00 -0.05 \ ATOM 105 CA ALA L 14 -12.976 5.521 1.695 1.00 -0.05 \ ATOM 106 C ALA L 14 -13.328 4.611 2.909 1.00 -0.05 \ ATOM 107 O ALA L 14 -14.494 4.252 3.038 1.00 -0.05 \ ATOM 108 CB ALA L 14 -12.255 4.755 0.618 1.00 -0.05 \ ATOM 109 N LEU L 15 -12.374 4.354 3.791 1.00 1.72 \ ATOM 110 CA LEU L 15 -12.642 3.575 4.995 1.00 1.72 \ ATOM 111 C LEU L 15 -13.643 4.282 5.859 1.00 1.72 \ ATOM 112 O LEU L 15 -14.564 3.672 6.473 1.00 1.72 \ ATOM 113 CB LEU L 15 -11.377 3.291 5.788 1.00 1.72 \ ATOM 114 CG LEU L 15 -10.383 2.395 5.106 1.00 1.72 \ ATOM 115 CD1 LEU L 15 -9.082 2.341 5.928 1.00 1.72 \ ATOM 116 CD2 LEU L 15 -10.977 1.005 5.005 1.00 1.72 \ ATOM 117 N TYR L 16 -13.504 5.606 5.984 1.00 -0.23 \ ATOM 118 CA TYR L 16 -14.446 6.371 6.848 1.00 -0.23 \ ATOM 119 C TYR L 16 -15.905 6.094 6.393 1.00 -0.23 \ ATOM 120 O TYR L 16 -16.785 5.863 7.194 1.00 -0.23 \ ATOM 121 CB TYR L 16 -14.094 7.882 6.805 1.00 -0.23 \ ATOM 122 CG TYR L 16 -15.087 8.730 7.530 1.00 -0.23 \ ATOM 123 CD1 TYR L 16 -15.155 8.727 8.892 1.00 -0.23 \ ATOM 124 CD2 TYR L 16 -15.914 9.612 6.884 1.00 -0.23 \ ATOM 125 CE1 TYR L 16 -16.051 9.522 9.596 1.00 -0.23 \ ATOM 126 CE2 TYR L 16 -16.764 10.433 7.567 1.00 -0.23 \ ATOM 127 CZ TYR L 16 -16.839 10.443 8.929 1.00 -0.23 \ ATOM 128 OH TYR L 16 -17.730 11.201 9.667 1.00 -0.23 \ ATOM 129 N LEU L 17 -16.144 6.252 5.077 1.00 -0.22 \ ATOM 130 CA LEU L 17 -17.454 5.983 4.507 1.00 -0.22 \ ATOM 131 C LEU L 17 -17.880 4.541 4.642 1.00 -0.22 \ ATOM 132 O LEU L 17 -19.051 4.315 5.113 1.00 -0.22 \ ATOM 133 CB LEU L 17 -17.478 6.376 3.054 1.00 -0.22 \ ATOM 134 CG LEU L 17 -18.796 6.114 2.280 1.00 -0.22 \ ATOM 135 CD1 LEU L 17 -19.979 6.929 2.790 1.00 -0.22 \ ATOM 136 CD2 LEU L 17 -18.623 6.364 0.813 1.00 -0.22 \ ATOM 137 N VAL L 18 -17.038 3.634 4.210 1.00 0.22 \ ATOM 138 CA VAL L 18 -17.431 2.167 4.140 1.00 0.22 \ ATOM 139 C VAL L 18 -17.655 1.668 5.572 1.00 0.22 \ ATOM 140 O VAL L 18 -18.659 0.927 5.830 1.00 0.22 \ ATOM 141 CB VAL L 18 -16.375 1.370 3.438 1.00 0.22 \ ATOM 142 CG1 VAL L 18 -16.574 -0.157 3.623 1.00 0.22 \ ATOM 143 CG2 VAL L 18 -16.293 1.711 1.952 1.00 0.22 \ ATOM 144 N CYS L 19 -16.809 2.077 6.506 1.00 1.72 \ ATOM 145 CA CYS L 19 -16.870 1.506 7.848 1.00 1.72 \ ATOM 146 C CYS L 19 -17.948 2.136 8.680 1.00 1.72 \ ATOM 147 O CYS L 19 -18.535 1.520 9.601 1.00 1.72 \ ATOM 148 CB CYS L 19 -15.490 1.543 8.518 1.00 1.72 \ ATOM 149 SG CYS L 19 -14.248 0.672 7.610 1.00 1.72 \ ATOM 150 N GLY L 20 -18.224 3.405 8.438 1.00 -0.22 \ ATOM 151 CA GLY L 20 -19.251 4.109 9.235 1.00 -0.22 \ ATOM 152 C GLY L 20 -19.037 3.976 10.757 1.00 -0.22 \ ATOM 153 O GLY L 20 -17.933 4.118 11.294 1.00 -0.22 \ ATOM 154 N GLU L 21 -20.127 3.662 11.477 1.00 0.20 \ ATOM 155 CA GLU L 21 -20.078 3.599 12.925 1.00 0.20 \ ATOM 156 C GLU L 21 -19.219 2.462 13.438 1.00 0.20 \ ATOM 157 O GLU L 21 -18.824 2.521 14.625 1.00 0.20 \ ATOM 158 CB GLU L 21 -21.483 3.463 13.540 1.00 0.20 \ ATOM 159 CG GLU L 21 -22.441 4.606 13.184 1.00 0.20 \ ATOM 160 CD GLU L 21 -22.222 5.900 13.987 1.00 0.20 \ ATOM 161 OE1 GLU L 21 -21.840 5.872 15.190 1.00 0.20 \ ATOM 162 OE2 GLU L 21 -22.433 7.001 13.408 1.00 0.20 \ ATOM 163 N ARG L 22 -18.845 1.515 12.574 1.00 -0.65 \ ATOM 164 CA ARG L 22 -17.927 0.435 13.014 1.00 -0.65 \ ATOM 165 C ARG L 22 -16.515 0.939 13.272 1.00 -0.65 \ ATOM 166 O ARG L 22 -15.782 0.417 14.093 1.00 -0.65 \ ATOM 167 CB ARG L 22 -17.922 -0.656 11.959 1.00 -0.65 \ ATOM 168 CG ARG L 22 -17.075 -1.861 12.170 1.00 -0.65 \ ATOM 169 CD ARG L 22 -17.389 -2.900 11.107 1.00 -0.65 \ ATOM 170 NE ARG L 22 -16.355 -3.901 11.100 1.00 -0.65 \ ATOM 171 CZ ARG L 22 -16.179 -4.814 10.167 1.00 -0.65 \ ATOM 172 NH1 ARG L 22 -17.000 -4.877 9.109 1.00 -0.65 \ ATOM 173 NH2 ARG L 22 -15.220 -5.685 10.248 1.00 -0.65 \ ATOM 174 N GLY L 23 -16.098 1.964 12.503 1.00 1.72 \ ATOM 175 CA GLY L 23 -14.743 2.409 12.610 1.00 1.72 \ ATOM 176 C GLY L 23 -13.704 1.498 11.965 1.00 1.72 \ ATOM 177 O GLY L 23 -14.019 0.493 11.339 1.00 1.72 \ ATOM 178 N PHE L 24 -12.442 1.932 12.055 1.00 1.10 \ ATOM 179 CA PHE L 24 -11.339 1.250 11.312 1.00 1.10 \ ATOM 180 C PHE L 24 -9.992 1.571 11.942 1.00 1.10 \ ATOM 181 O PHE L 24 -9.823 2.526 12.624 1.00 1.10 \ ATOM 182 CB PHE L 24 -11.320 1.648 9.868 1.00 1.10 \ ATOM 183 CG PHE L 24 -11.112 3.111 9.644 1.00 1.10 \ ATOM 184 CD1 PHE L 24 -12.152 4.031 9.565 1.00 1.10 \ ATOM 185 CD2 PHE L 24 -9.825 3.584 9.409 1.00 1.10 \ ATOM 186 CE1 PHE L 24 -11.945 5.381 9.357 1.00 1.10 \ ATOM 187 CE2 PHE L 24 -9.614 4.962 9.135 1.00 1.10 \ ATOM 188 CZ PHE L 24 -10.705 5.843 9.155 1.00 1.10 \ ATOM 189 N PHE L 25 -9.021 0.700 11.591 1.00 0.52 \ ATOM 190 CA PHE L 25 -7.601 0.925 11.941 1.00 0.52 \ ATOM 191 C PHE L 25 -6.973 1.299 10.635 1.00 0.52 \ ATOM 192 O PHE L 25 -7.274 0.755 9.598 1.00 0.52 \ ATOM 193 CB PHE L 25 -6.856 -0.340 12.424 1.00 0.52 \ ATOM 194 CG PHE L 25 -7.223 -0.837 13.776 1.00 0.52 \ ATOM 195 CD1 PHE L 25 -8.261 -1.785 13.912 1.00 0.52 \ ATOM 196 CD2 PHE L 25 -6.456 -0.525 14.891 1.00 0.52 \ ATOM 197 CE1 PHE L 25 -8.558 -2.249 15.209 1.00 0.52 \ ATOM 198 CE2 PHE L 25 -6.703 -1.029 16.167 1.00 0.52 \ ATOM 199 CZ PHE L 25 -7.756 -1.928 16.316 1.00 0.52 \ ATOM 200 N TYR L 26 -6.031 2.264 10.688 1.00 -0.25 \ ATOM 201 CA TYR L 26 -5.224 2.575 9.513 1.00 -0.25 \ ATOM 202 C TYR L 26 -3.762 2.629 10.006 1.00 -0.25 \ ATOM 203 O TYR L 26 -3.429 3.457 10.773 1.00 -0.25 \ ATOM 204 CB TYR L 26 -5.585 3.891 8.810 1.00 -0.25 \ ATOM 205 CG TYR L 26 -4.669 4.164 7.645 1.00 -0.25 \ ATOM 206 CD1 TYR L 26 -4.878 3.539 6.433 1.00 -0.25 \ ATOM 207 CD2 TYR L 26 -3.560 5.006 7.778 1.00 -0.25 \ ATOM 208 CE1 TYR L 26 -4.024 3.791 5.370 1.00 -0.25 \ ATOM 209 CE2 TYR L 26 -2.683 5.210 6.703 1.00 -0.25 \ ATOM 210 CZ TYR L 26 -2.943 4.568 5.534 1.00 -0.25 \ ATOM 211 OH TYR L 26 -2.168 4.710 4.338 1.00 -0.25 \ ATOM 219 N PRO L 28 0.116 2.413 7.814 1.00 -1.00 \ ATOM 220 CA PRO L 28 0.617 2.119 6.474 1.00 -1.00 \ ATOM 221 C PRO L 28 1.528 0.925 6.359 1.00 -1.00 \ ATOM 222 O PRO L 28 1.594 0.315 5.279 1.00 -1.00 \ ATOM 223 CB PRO L 28 1.378 3.387 6.080 1.00 -1.00 \ ATOM 224 CG PRO L 28 0.896 4.455 6.972 1.00 -1.00 \ ATOM 225 CD PRO L 28 0.378 3.806 8.211 1.00 -1.00 \ ATOM 226 N GLY L 29 2.239 0.582 7.430 1.00 -1.00 \ ATOM 227 CA GLY L 29 3.246 -0.466 7.303 1.00 -1.00 \ ATOM 228 C GLY L 29 2.666 -1.860 7.262 1.00 -1.00 \ ATOM 229 O GLY L 29 3.343 -2.781 6.877 1.00 -1.00 \ """, "e5bqqL1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5bqqL1_csv", state=0, origin=1) cmd.zoom("e5bqqL1_csv", animate=-1)