cmd.read_pdbstr("""\ ATOM 1 N GLY A 5 43.426 21.197 10.328 1.00 1.02 \ ATOM 2 CA GLY A 5 43.324 22.560 9.800 1.00 1.02 \ ATOM 3 C GLY A 5 44.608 23.188 9.208 1.00 1.02 \ ATOM 4 O GLY A 5 45.729 22.751 9.518 1.00 1.02 \ ATOM 5 N PRO A 6 44.456 24.218 8.336 1.00 -0.51 \ ATOM 6 CA PRO A 6 45.605 24.929 7.760 1.00 -0.51 \ ATOM 7 C PRO A 6 46.102 26.050 8.655 1.00 -0.51 \ ATOM 8 O PRO A 6 45.281 26.636 9.349 1.00 -0.51 \ ATOM 9 CB PRO A 6 45.040 25.513 6.461 1.00 -0.51 \ ATOM 10 CG PRO A 6 43.625 25.754 6.759 1.00 -0.51 \ ATOM 11 CD PRO A 6 43.198 24.655 7.699 1.00 -0.51 \ ATOM 12 N LEU A 7 47.395 26.369 8.596 1.00 0.56 \ ATOM 13 CA LEU A 7 47.987 27.402 9.449 1.00 0.56 \ ATOM 14 C LEU A 7 48.474 28.641 8.700 1.00 0.56 \ ATOM 15 O LEU A 7 48.987 28.509 7.571 1.00 0.56 \ ATOM 16 CB LEU A 7 49.177 26.835 10.200 1.00 0.56 \ ATOM 17 CG LEU A 7 48.972 25.725 11.212 1.00 0.56 \ ATOM 18 CD1 LEU A 7 50.052 24.674 10.993 1.00 0.56 \ ATOM 19 CD2 LEU A 7 49.037 26.281 12.624 1.00 0.56 \ ATOM 20 N LEU A 8 48.361 29.817 9.354 1.00 0.49 \ ATOM 21 CA LEU A 8 48.868 31.092 8.801 1.00 0.49 \ ATOM 22 C LEU A 8 49.980 31.746 9.634 1.00 0.49 \ ATOM 23 O LEU A 8 49.931 31.776 10.860 1.00 0.49 \ ATOM 24 CB LEU A 8 47.733 32.113 8.618 1.00 0.49 \ ATOM 25 CG LEU A 8 48.226 33.350 7.855 1.00 0.49 \ ATOM 26 CD1 LEU A 8 48.684 32.999 6.419 1.00 0.49 \ ATOM 27 CD2 LEU A 8 47.192 34.434 7.845 1.00 0.49 \ ATOM 28 N LEU A 9 50.973 32.283 8.923 1.00 0.95 \ ATOM 29 CA LEU A 9 52.206 32.791 9.517 1.00 0.95 \ ATOM 30 C LEU A 9 52.458 34.275 9.231 1.00 0.95 \ ATOM 31 O LEU A 9 53.433 34.864 9.716 1.00 0.95 \ ATOM 32 CB LEU A 9 53.375 31.963 8.997 1.00 0.95 \ ATOM 33 CG LEU A 9 53.578 30.575 9.632 1.00 0.95 \ ATOM 34 CD1 LEU A 9 52.295 29.889 9.987 1.00 0.95 \ ATOM 35 CD2 LEU A 9 54.359 29.641 8.728 1.00 0.95 \ ATOM 36 N LEU A 18 51.071 30.557 4.673 1.00 -0.05 \ ATOM 37 CA LEU A 18 49.978 29.566 4.699 1.00 -0.05 \ ATOM 38 C LEU A 18 50.465 28.159 4.387 1.00 -0.05 \ ATOM 39 O LEU A 18 51.014 27.923 3.308 1.00 -0.05 \ ATOM 40 CB LEU A 18 48.861 29.911 3.705 1.00 -0.05 \ ATOM 41 CG LEU A 18 47.517 29.351 4.182 1.00 -0.05 \ ATOM 42 CD1 LEU A 18 46.885 30.300 5.223 1.00 -0.05 \ ATOM 43 CD2 LEU A 18 46.548 29.101 3.056 1.00 -0.05 \ ATOM 44 N VAL A 19 50.244 27.229 5.318 1.00 -0.38 \ ATOM 45 CA VAL A 19 50.820 25.888 5.209 1.00 -0.38 \ ATOM 46 C VAL A 19 49.850 24.815 5.648 1.00 -0.38 \ ATOM 47 O VAL A 19 48.944 25.089 6.428 1.00 -0.38 \ ATOM 48 CB VAL A 19 52.103 25.768 6.059 1.00 -0.38 \ ATOM 49 CG1 VAL A 19 53.150 26.664 5.521 1.00 -0.38 \ ATOM 50 CG2 VAL A 19 51.843 26.179 7.470 1.00 -0.38 \ ATOM 51 N PHE A 20 50.041 23.596 5.153 1.00 -1.14 \ ATOM 52 CA PHE A 20 49.209 22.463 5.571 1.00 -1.14 \ ATOM 53 C PHE A 20 50.057 21.280 6.025 1.00 -1.14 \ ATOM 54 O PHE A 20 50.540 20.515 5.191 1.00 -1.14 \ ATOM 55 CB PHE A 20 48.311 21.984 4.444 1.00 -1.14 \ ATOM 56 CG PHE A 20 47.464 23.044 3.829 1.00 -1.14 \ ATOM 57 CD1 PHE A 20 48.030 24.113 3.162 1.00 -1.14 \ ATOM 58 CD2 PHE A 20 46.090 22.930 3.859 1.00 -1.14 \ ATOM 59 CE1 PHE A 20 47.230 25.065 2.575 1.00 -1.14 \ ATOM 60 CE2 PHE A 20 45.297 23.869 3.268 1.00 -1.14 \ ATOM 61 CZ PHE A 20 45.861 24.941 2.631 1.00 -1.14 \ ATOM 62 N PRO A 21 50.200 21.089 7.343 1.00 -1.46 \ ATOM 63 CA PRO A 21 51.325 20.264 7.833 1.00 -1.46 \ ATOM 64 C PRO A 21 51.404 18.807 7.341 1.00 -1.46 \ ATOM 65 O PRO A 21 52.486 18.193 7.398 1.00 -1.46 \ ATOM 66 CB PRO A 21 51.127 20.294 9.350 1.00 -1.46 \ ATOM 67 CG PRO A 21 50.365 21.573 9.600 1.00 -1.46 \ ATOM 68 CD PRO A 21 49.414 21.672 8.448 1.00 -1.46 \ ATOM 69 N HIS A 36 58.490 22.110 10.750 1.00 0.75 \ ATOM 70 CA HIS A 36 57.033 21.981 10.598 1.00 0.75 \ ATOM 71 C HIS A 36 56.329 21.911 11.973 1.00 0.75 \ ATOM 72 O HIS A 36 55.344 22.611 12.212 1.00 0.75 \ ATOM 73 CB HIS A 36 56.688 20.730 9.758 1.00 0.75 \ ATOM 74 CG HIS A 36 55.934 21.010 8.485 1.00 0.75 \ ATOM 75 ND1 HIS A 36 56.557 21.268 7.279 1.00 0.75 \ ATOM 76 CD2 HIS A 36 54.602 21.026 8.228 1.00 0.75 \ ATOM 77 CE1 HIS A 36 55.641 21.456 6.342 1.00 0.75 \ ATOM 78 NE2 HIS A 36 54.451 21.314 6.893 1.00 0.75 \ ATOM 79 N GLU A 37 56.856 21.082 12.875 1.00 -0.22 \ ATOM 80 CA GLU A 37 56.181 20.739 14.141 1.00 -0.22 \ ATOM 81 C GLU A 37 56.379 21.757 15.303 1.00 -0.22 \ ATOM 82 O GLU A 37 55.703 21.671 16.337 1.00 -0.22 \ ATOM 83 CB GLU A 37 56.633 19.334 14.603 1.00 -0.22 \ ATOM 84 CG GLU A 37 57.020 18.309 13.472 1.00 -0.22 \ ATOM 85 CD GLU A 37 55.962 18.100 12.373 1.00 -0.22 \ ATOM 86 OE1 GLU A 37 55.154 19.020 12.134 1.00 -0.22 \ ATOM 87 OE2 GLU A 37 55.951 17.011 11.740 1.00 -0.22 \ ATOM 88 N ALA A 38 57.288 22.716 15.146 1.00 -0.67 \ ATOM 89 CA ALA A 38 57.420 23.788 16.137 1.00 -0.67 \ ATOM 90 C ALA A 38 56.195 24.644 16.045 1.00 -0.67 \ ATOM 91 O ALA A 38 55.743 25.203 17.041 1.00 -0.67 \ ATOM 92 CB ALA A 38 58.650 24.628 15.899 1.00 -0.67 \ ATOM 93 N LEU A 39 55.671 24.729 14.822 1.00 0.76 \ ATOM 94 CA LEU A 39 54.515 25.556 14.497 1.00 0.76 \ ATOM 95 C LEU A 39 53.285 25.036 15.201 1.00 0.76 \ ATOM 96 O LEU A 39 52.505 25.808 15.766 1.00 0.76 \ ATOM 97 CB LEU A 39 54.263 25.578 12.995 1.00 0.76 \ ATOM 98 CG LEU A 39 55.458 25.856 12.087 1.00 0.76 \ ATOM 99 CD1 LEU A 39 55.046 25.982 10.607 1.00 0.76 \ ATOM 100 CD2 LEU A 39 56.200 27.105 12.573 1.00 0.76 \ ATOM 101 N LEU A 40 53.110 23.718 15.159 1.00 0.47 \ ATOM 102 CA LEU A 40 52.021 23.080 15.888 1.00 0.47 \ ATOM 103 C LEU A 40 52.245 23.112 17.423 1.00 0.47 \ ATOM 104 O LEU A 40 51.289 23.353 18.178 1.00 0.47 \ ATOM 105 CB LEU A 40 51.840 21.649 15.380 1.00 0.47 \ ATOM 106 CG LEU A 40 51.517 21.526 13.888 1.00 0.47 \ ATOM 107 CD1 LEU A 40 52.693 20.959 13.144 1.00 0.47 \ ATOM 108 CD2 LEU A 40 50.288 20.687 13.641 1.00 0.47 \ ATOM 109 N GLU A 41 53.486 22.890 17.881 1.00 0.51 \ ATOM 110 CA GLU A 41 53.794 22.941 19.318 1.00 0.51 \ ATOM 111 C GLU A 41 53.616 24.340 19.914 1.00 0.51 \ ATOM 112 O GLU A 41 53.161 24.490 21.055 1.00 0.51 \ ATOM 113 CB GLU A 41 55.219 22.437 19.572 1.00 0.51 \ ATOM 114 CG GLU A 41 55.243 20.964 20.004 1.00 0.51 \ ATOM 115 CD GLU A 41 56.469 20.223 19.534 1.00 0.51 \ ATOM 116 OE1 GLU A 41 57.528 20.868 19.363 1.00 0.51 \ ATOM 117 OE2 GLU A 41 56.365 18.995 19.322 1.00 0.51 \ ATOM 118 N ALA A 42 53.974 25.367 19.152 1.00 -0.94 \ ATOM 119 CA ALA A 42 53.704 26.731 19.575 1.00 -0.94 \ ATOM 120 C ALA A 42 52.186 26.917 19.611 1.00 -0.94 \ ATOM 121 O ALA A 42 51.625 27.366 20.622 1.00 -0.94 \ ATOM 122 CB ALA A 42 54.378 27.734 18.639 1.00 -0.94 \ ATOM 123 N GLY A 43 51.530 26.510 18.524 1.00 -0.86 \ ATOM 124 CA GLY A 43 50.086 26.622 18.388 1.00 -0.86 \ ATOM 125 C GLY A 43 49.649 28.015 17.983 1.00 -0.86 \ ATOM 126 O GLY A 43 50.455 28.930 17.924 1.00 -0.86 \ ATOM 127 N PRO A 44 48.362 28.190 17.679 1.00 -0.29 \ ATOM 128 CA PRO A 44 47.895 29.546 17.347 1.00 -0.29 \ ATOM 129 C PRO A 44 48.088 30.557 18.481 1.00 -0.29 \ ATOM 130 O PRO A 44 47.752 30.281 19.635 1.00 -0.29 \ ATOM 131 CB PRO A 44 46.401 29.346 17.045 1.00 -0.29 \ ATOM 132 CG PRO A 44 46.301 27.900 16.595 1.00 -0.29 \ ATOM 133 CD PRO A 44 47.349 27.157 17.399 1.00 -0.29 \ ATOM 134 N GLY A 45 48.634 31.719 18.132 1.00 2.00 \ ATOM 135 CA GLY A 45 48.849 32.811 19.073 1.00 2.00 \ ATOM 136 C GLY A 45 50.189 32.704 19.759 1.00 2.00 \ ATOM 137 O GLY A 45 50.468 33.456 20.707 1.00 2.00 \ ATOM 138 N GLY A 46 50.994 31.762 19.256 1.00 -0.91 \ ATOM 139 CA GLY A 46 52.291 31.412 19.802 1.00 -0.91 \ ATOM 140 C GLY A 46 53.310 31.859 18.793 1.00 -0.91 \ ATOM 141 O GLY A 46 52.922 32.471 17.802 1.00 -0.91 \ ATOM 142 N VAL A 47 54.588 31.556 19.038 1.00 -0.58 \ ATOM 143 CA VAL A 47 55.709 32.085 18.237 1.00 -0.58 \ ATOM 144 C VAL A 47 56.780 31.027 17.877 1.00 -0.58 \ ATOM 145 O VAL A 47 56.982 30.040 18.603 1.00 -0.58 \ ATOM 146 CB VAL A 47 56.400 33.278 18.985 1.00 -0.58 \ ATOM 147 CG1 VAL A 47 55.394 34.387 19.317 1.00 -0.58 \ ATOM 148 CG2 VAL A 47 57.070 32.810 20.282 1.00 -0.58 \ ATOM 149 N VAL A 48 57.440 31.236 16.737 1.00 0.24 \ ATOM 150 CA VAL A 48 58.457 30.304 16.199 1.00 0.24 \ ATOM 151 C VAL A 48 59.415 31.015 15.238 1.00 0.24 \ ATOM 152 O VAL A 48 60.640 30.951 15.377 1.00 0.24 \ ATOM 153 CB VAL A 48 57.842 29.125 15.408 1.00 0.24 \ ATOM 154 CG1 VAL A 48 58.849 28.017 15.253 1.00 0.24 \ ATOM 155 CG2 VAL A 48 56.596 28.578 16.074 1.00 0.24 \ ATOM 156 N SER A 57 55.673 33.858 13.937 1.00 -0.33 \ ATOM 157 CA SER A 57 54.356 34.134 14.544 1.00 -0.33 \ ATOM 158 C SER A 57 53.217 33.242 13.993 1.00 -0.33 \ ATOM 159 O SER A 57 52.652 33.539 12.933 1.00 -0.33 \ ATOM 160 CB SER A 57 53.990 35.612 14.349 1.00 -0.33 \ ATOM 161 OG SER A 57 53.680 35.908 12.993 1.00 -0.33 \ ATOM 162 N VAL A 58 52.874 32.174 14.729 1.00 0.07 \ ATOM 163 CA VAL A 58 51.892 31.173 14.290 1.00 0.07 \ ATOM 164 C VAL A 58 50.492 31.645 14.524 1.00 0.07 \ ATOM 165 O VAL A 58 50.243 32.339 15.496 1.00 0.07 \ ATOM 166 CB VAL A 58 52.058 29.849 15.028 1.00 0.07 \ ATOM 167 CG1 VAL A 58 50.954 28.875 14.649 1.00 0.07 \ ATOM 168 CG2 VAL A 58 53.396 29.261 14.737 1.00 0.07 \ ATOM 169 N HIS A 59 49.579 31.254 13.639 1.00 0.19 \ ATOM 170 CA HIS A 59 48.166 31.632 13.748 1.00 0.19 \ ATOM 171 C HIS A 59 47.237 30.596 13.121 1.00 0.19 \ ATOM 172 O HIS A 59 47.632 29.865 12.206 1.00 0.19 \ ATOM 173 CB HIS A 59 47.926 32.981 13.072 1.00 0.19 \ ATOM 174 CG HIS A 59 48.650 34.122 13.713 1.00 0.19 \ ATOM 175 ND1 HIS A 59 48.491 34.447 15.042 1.00 0.19 \ ATOM 176 CD2 HIS A 59 49.533 35.012 13.208 1.00 0.19 \ ATOM 177 CE1 HIS A 59 49.245 35.493 15.328 1.00 0.19 \ ATOM 178 NE2 HIS A 59 49.890 35.853 14.229 1.00 0.19 \ ATOM 179 N ARG A 60 46.003 30.542 13.609 1.00 2.56 \ ATOM 180 CA ARG A 60 44.965 29.758 12.947 1.00 2.56 \ ATOM 181 C ARG A 60 44.103 30.701 12.134 1.00 2.56 \ ATOM 182 O ARG A 60 43.440 31.556 12.720 1.00 2.56 \ ATOM 183 CB ARG A 60 44.098 29.007 13.945 1.00 2.56 \ ATOM 184 CG ARG A 60 42.879 28.306 13.328 1.00 2.56 \ ATOM 185 CD ARG A 60 41.666 28.394 14.247 1.00 2.56 \ ATOM 186 NE ARG A 60 40.436 27.912 13.633 1.00 2.56 \ ATOM 187 CZ ARG A 60 39.264 27.865 14.263 1.00 2.56 \ ATOM 188 NH1 ARG A 60 39.170 28.254 15.533 1.00 2.56 \ ATOM 189 NH2 ARG A 60 38.181 27.425 13.629 1.00 2.56 \ """, "e5c1iA2_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5c1iA2_csv", state=0, origin=1) cmd.zoom("e5c1iA2_csv", animate=-1)