cmd.read_pdbstr("""\ ATOM 1 N MET A 49 13.234 -71.495 -43.235 1.00 0.72 \ ATOM 2 CA MET A 49 12.341 -72.355 -43.996 1.00 0.72 \ ATOM 3 C MET A 49 13.104 -73.528 -44.603 1.00 0.72 \ ATOM 4 O MET A 49 12.577 -74.634 -44.667 1.00 0.72 \ ATOM 5 CB MET A 49 11.619 -71.566 -45.091 1.00 0.72 \ ATOM 6 CG MET A 49 10.402 -72.285 -45.668 1.00 0.72 \ ATOM 7 SD MET A 49 9.166 -72.706 -44.416 1.00 0.72 \ ATOM 8 CE MET A 49 7.757 -73.130 -45.429 1.00 0.72 \ ATOM 9 N ASP A 50 14.343 -73.316 -45.029 0.50 -0.80 \ ATOM 10 CA ASP A 50 15.098 -74.419 -45.610 0.50 -0.80 \ ATOM 11 C ASP A 50 15.418 -75.461 -44.538 0.50 -0.80 \ ATOM 12 O ASP A 50 15.496 -76.652 -44.836 0.50 -0.80 \ ATOM 13 CB ASP A 50 16.382 -73.926 -46.276 0.50 -0.80 \ ATOM 14 CG ASP A 50 16.898 -74.896 -47.325 0.50 -0.80 \ ATOM 15 OD1 ASP A 50 18.106 -75.211 -47.303 0.50 -0.80 \ ATOM 16 OD2 ASP A 50 16.094 -75.338 -48.177 0.50 -0.80 \ ATOM 17 N GLN A 51 15.600 -75.022 -43.295 1.00 -1.04 \ ATOM 18 CA GLN A 51 15.798 -75.959 -42.194 1.00 -1.04 \ ATOM 19 C GLN A 51 14.523 -76.763 -41.965 1.00 -1.04 \ ATOM 20 O GLN A 51 14.569 -77.965 -41.705 1.00 -1.04 \ ATOM 21 CB GLN A 51 16.193 -75.222 -40.911 1.00 -1.04 \ ATOM 22 CG GLN A 51 17.517 -74.474 -40.987 1.00 -1.04 \ ATOM 23 CD GLN A 51 18.700 -75.390 -41.223 1.00 -1.04 \ ATOM 24 OE1 GLN A 51 19.395 -75.275 -42.233 1.00 -1.04 \ ATOM 25 NE2 GLN A 51 18.943 -76.299 -40.285 1.00 -1.04 \ ATOM 26 N ILE A 52 13.385 -76.085 -42.074 1.00 0.65 \ ATOM 27 CA ILE A 52 12.085 -76.710 -41.868 1.00 0.65 \ ATOM 28 C ILE A 52 11.751 -77.684 -42.995 1.00 0.65 \ ATOM 29 O ILE A 52 11.205 -78.760 -42.752 1.00 0.65 \ ATOM 30 CB ILE A 52 10.976 -75.641 -41.759 1.00 0.65 \ ATOM 31 CG1 ILE A 52 11.159 -74.838 -40.469 1.00 0.65 \ ATOM 32 CG2 ILE A 52 9.590 -76.281 -41.776 1.00 0.65 \ ATOM 33 CD1 ILE A 52 10.342 -73.560 -40.405 1.00 0.65 \ ATOM 34 N MET A 53 12.083 -77.304 -44.224 1.00 -0.47 \ ATOM 35 CA MET A 53 11.732 -78.103 -45.394 1.00 -0.47 \ ATOM 36 C MET A 53 12.667 -79.300 -45.603 1.00 -0.47 \ ATOM 37 O MET A 53 12.300 -80.257 -46.278 1.00 -0.47 \ ATOM 38 CB MET A 53 11.730 -77.222 -46.648 1.00 -0.47 \ ATOM 39 CG MET A 53 10.660 -76.129 -46.648 1.00 -0.47 \ ATOM 40 SD MET A 53 8.969 -76.745 -46.516 1.00 -0.47 \ ATOM 41 CE MET A 53 8.841 -77.657 -48.047 1.00 -0.47 \ ATOM 42 N THR A 54 13.868 -79.257 -45.032 1.00 -0.49 \ ATOM 43 CA THR A 54 14.810 -80.368 -45.173 1.00 -0.49 \ ATOM 44 C THR A 54 14.704 -81.363 -44.020 1.00 -0.49 \ ATOM 45 O THR A 54 15.352 -82.409 -44.036 1.00 -0.49 \ ATOM 46 CB THR A 54 16.270 -79.872 -45.262 1.00 -0.49 \ ATOM 47 OG1 THR A 54 16.575 -79.044 -44.131 1.00 -0.49 \ ATOM 48 CG2 THR A 54 16.493 -79.089 -46.552 1.00 -0.49 \ ATOM 49 N GLY A 55 13.892 -81.034 -43.021 1.00 0.51 \ ATOM 50 CA GLY A 55 13.671 -81.922 -41.895 1.00 0.51 \ ATOM 51 C GLY A 55 14.669 -81.727 -40.767 1.00 0.51 \ ATOM 52 O GLY A 55 14.722 -82.532 -39.836 1.00 0.51 \ ATOM 53 N ASN A 56 15.453 -80.655 -40.842 1.00 -0.87 \ ATOM 54 CA ASN A 56 16.500 -80.397 -39.858 1.00 -0.87 \ ATOM 55 C ASN A 56 16.037 -79.537 -38.685 1.00 -0.87 \ ATOM 56 O ASN A 56 16.758 -79.387 -37.699 1.00 -0.87 \ ATOM 57 CB ASN A 56 17.700 -79.731 -40.531 1.00 -0.87 \ ATOM 58 CG ASN A 56 18.563 -80.719 -41.289 1.00 -0.87 \ ATOM 59 OD1 ASN A 56 19.232 -81.561 -40.690 1.00 -0.87 \ ATOM 60 ND2 ASN A 56 18.562 -80.614 -42.613 1.00 -0.87 \ ATOM 61 N ALA A 57 14.842 -78.969 -38.793 1.00 0.05 \ ATOM 62 CA ALA A 57 14.284 -78.163 -37.711 1.00 0.05 \ ATOM 63 C ALA A 57 13.523 -79.047 -36.732 1.00 0.05 \ ATOM 64 O ALA A 57 12.657 -79.825 -37.131 1.00 0.05 \ ATOM 65 CB ALA A 57 13.372 -77.079 -38.268 1.00 0.05 \ ATOM 66 N ARG A 58 13.854 -78.928 -35.450 1.00 -0.40 \ ATOM 67 CA ARG A 58 13.141 -79.660 -34.411 1.00 -0.40 \ ATOM 68 C ARG A 58 11.755 -79.041 -34.249 1.00 -0.40 \ ATOM 69 O ARG A 58 11.584 -77.848 -34.501 1.00 -0.40 \ ATOM 70 CB ARG A 58 13.903 -79.619 -33.082 1.00 -0.40 \ ATOM 71 CG ARG A 58 15.388 -79.952 -33.180 1.00 -0.40 \ ATOM 72 CD ARG A 58 15.650 -81.445 -33.296 1.00 -0.40 \ ATOM 73 NE ARG A 58 15.445 -82.138 -32.021 1.00 -0.40 \ ATOM 74 CZ ARG A 58 14.461 -82.999 -31.763 1.00 -0.40 \ ATOM 75 NH1 ARG A 58 13.557 -83.312 -32.687 1.00 -0.40 \ ATOM 76 NH2 ARG A 58 14.385 -83.559 -30.563 1.00 -0.40 \ ATOM 77 N PRO A 59 10.759 -79.847 -33.842 1.00 -0.16 \ ATOM 78 CA PRO A 59 9.406 -79.318 -33.630 1.00 -0.16 \ ATOM 79 C PRO A 59 9.368 -78.070 -32.750 1.00 -0.16 \ ATOM 80 O PRO A 59 8.567 -77.170 -32.996 1.00 -0.16 \ ATOM 81 CB PRO A 59 8.686 -80.483 -32.951 1.00 -0.16 \ ATOM 82 CG PRO A 59 9.356 -81.689 -33.498 1.00 -0.16 \ ATOM 83 CD PRO A 59 10.803 -81.311 -33.673 1.00 -0.16 \ ATOM 84 N ALA A 60 10.231 -78.020 -31.740 1.00 -0.51 \ ATOM 85 CA ALA A 60 10.292 -76.873 -30.841 1.00 -0.51 \ ATOM 86 C ALA A 60 10.771 -75.622 -31.574 1.00 -0.51 \ ATOM 87 O ALA A 60 10.313 -74.513 -31.294 1.00 -0.51 \ ATOM 88 CB ALA A 60 11.205 -77.175 -29.662 1.00 -0.51 \ ATOM 89 N GLN A 61 11.695 -75.807 -32.512 1.00 -0.39 \ ATOM 90 CA GLN A 61 12.234 -74.696 -33.289 1.00 -0.39 \ ATOM 91 C GLN A 61 11.200 -74.176 -34.281 1.00 -0.39 \ ATOM 92 O GLN A 61 11.060 -72.967 -34.472 1.00 -0.39 \ ATOM 93 CB GLN A 61 13.505 -75.130 -34.021 1.00 -0.39 \ ATOM 94 CG GLN A 61 14.701 -75.328 -33.097 1.00 -0.39 \ ATOM 95 CD GLN A 61 15.759 -76.251 -33.675 1.00 -0.39 \ ATOM 96 OE1 GLN A 61 15.528 -76.945 -34.666 1.00 -0.39 \ ATOM 97 NE2 GLN A 61 16.929 -76.266 -33.050 1.00 -0.39 \ ATOM 98 N ILE A 62 10.479 -75.099 -34.908 1.00 0.27 \ ATOM 99 CA ILE A 62 9.401 -74.743 -35.821 1.00 0.27 \ ATOM 100 C ILE A 62 8.343 -73.921 -35.089 1.00 0.27 \ ATOM 101 O ILE A 62 7.984 -72.826 -35.527 1.00 0.27 \ ATOM 102 CB ILE A 62 8.748 -76.000 -36.440 1.00 0.27 \ ATOM 103 CG1 ILE A 62 9.795 -76.809 -37.212 1.00 0.27 \ ATOM 104 CG2 ILE A 62 7.581 -75.610 -37.351 1.00 0.27 \ ATOM 105 CD1 ILE A 62 9.279 -78.104 -37.817 1.00 0.27 \ ATOM 106 N ALA A 63 7.853 -74.457 -33.974 1.00 2.92 \ ATOM 107 CA ALA A 63 6.830 -73.790 -33.174 1.00 2.92 \ ATOM 108 C ALA A 63 7.294 -72.419 -32.695 1.00 2.92 \ ATOM 109 O ALA A 63 6.566 -71.435 -32.816 1.00 2.92 \ ATOM 110 CB ALA A 63 6.448 -74.655 -31.985 1.00 2.92 \ ATOM 111 N ALA A 64 8.503 -72.363 -32.145 1.00 2.15 \ ATOM 112 CA ALA A 64 9.061 -71.115 -31.639 1.00 2.15 \ ATOM 113 C ALA A 64 9.121 -70.066 -32.741 1.00 2.15 \ ATOM 114 O ALA A 64 8.751 -68.908 -32.535 1.00 2.15 \ ATOM 115 CB ALA A 64 10.451 -71.351 -31.058 1.00 2.15 \ ATOM 116 N PHE A 65 9.593 -70.484 -33.910 1.00 1.04 \ ATOM 117 CA PHE A 65 9.710 -69.595 -35.060 1.00 1.04 \ ATOM 118 C PHE A 65 8.342 -69.098 -35.523 1.00 1.04 \ ATOM 119 O PHE A 65 8.154 -67.907 -35.767 1.00 1.04 \ ATOM 120 CB PHE A 65 10.422 -70.310 -36.210 1.00 1.04 \ ATOM 121 CG PHE A 65 10.572 -69.467 -37.442 1.00 1.04 \ ATOM 122 CD1 PHE A 65 11.518 -68.457 -37.492 1.00 1.04 \ ATOM 123 CD2 PHE A 65 9.772 -69.685 -38.549 1.00 1.04 \ ATOM 124 CE1 PHE A 65 11.659 -67.677 -38.621 1.00 1.04 \ ATOM 125 CE2 PHE A 65 9.909 -68.907 -39.683 1.00 1.04 \ ATOM 126 CZ PHE A 65 10.856 -67.905 -39.719 1.00 1.04 \ ATOM 127 N ALA A 66 7.392 -70.020 -35.638 1.00 0.52 \ ATOM 128 CA ALA A 66 6.048 -69.687 -36.098 1.00 0.52 \ ATOM 129 C ALA A 66 5.394 -68.654 -35.186 1.00 0.52 \ ATOM 130 O ALA A 66 4.840 -67.660 -35.654 1.00 0.52 \ ATOM 131 CB ALA A 66 5.192 -70.941 -36.175 1.00 0.52 \ ATOM 132 N VAL A 67 5.475 -68.892 -33.882 1.00 0.98 \ ATOM 133 CA VAL A 67 4.894 -67.989 -32.893 1.00 0.98 \ ATOM 134 C VAL A 67 5.630 -66.650 -32.852 1.00 0.98 \ ATOM 135 O VAL A 67 5.000 -65.591 -32.819 1.00 0.98 \ ATOM 136 CB VAL A 67 4.909 -68.629 -31.490 1.00 0.98 \ ATOM 137 CG1 VAL A 67 4.421 -67.645 -30.429 1.00 0.98 \ ATOM 138 CG2 VAL A 67 4.057 -69.888 -31.478 1.00 0.98 \ ATOM 139 N ALA A 68 6.959 -66.700 -32.849 1.00 1.36 \ ATOM 140 CA ALA A 68 7.769 -65.486 -32.789 1.00 1.36 \ ATOM 141 C ALA A 68 7.498 -64.595 -33.995 1.00 1.36 \ ATOM 142 O ALA A 68 7.300 -63.385 -33.856 1.00 1.36 \ ATOM 143 CB ALA A 68 9.246 -65.837 -32.715 1.00 1.36 \ ATOM 144 N MET A 69 7.492 -65.203 -35.177 1.00 0.30 \ ATOM 145 CA MET A 69 7.203 -64.487 -36.415 1.00 0.30 \ ATOM 146 C MET A 69 5.839 -63.807 -36.349 1.00 0.30 \ ATOM 147 O MET A 69 5.676 -62.674 -36.802 1.00 0.30 \ ATOM 148 CB MET A 69 7.246 -65.446 -37.607 1.00 0.30 \ ATOM 149 CG MET A 69 7.124 -64.763 -38.960 1.00 0.30 \ ATOM 150 SD MET A 69 8.515 -63.681 -39.325 1.00 0.30 \ ATOM 151 CE MET A 69 9.811 -64.887 -39.540 1.00 0.30 \ ATOM 152 N THR A 70 4.862 -64.505 -35.779 1.00 -0.71 \ ATOM 153 CA THR A 70 3.493 -64.002 -35.722 1.00 -0.71 \ ATOM 154 C THR A 70 3.367 -62.773 -34.823 1.00 -0.71 \ ATOM 155 O THR A 70 2.787 -61.764 -35.219 1.00 -0.71 \ ATOM 156 CB THR A 70 2.521 -65.090 -35.217 1.00 -0.71 \ ATOM 157 OG1 THR A 70 2.591 -66.234 -36.078 1.00 -0.71 \ ATOM 158 CG2 THR A 70 1.085 -64.575 -35.189 1.00 -0.71 \ ATOM 159 N MET A 71 3.913 -62.860 -33.615 1.00 -0.54 \ ATOM 160 CA MET A 71 3.737 -61.802 -32.625 1.00 -0.54 \ ATOM 161 C MET A 71 4.591 -60.573 -32.929 1.00 -0.54 \ ATOM 162 O MET A 71 4.260 -59.465 -32.509 1.00 -0.54 \ ATOM 163 CB MET A 71 4.059 -62.333 -31.228 1.00 -0.54 \ ATOM 164 CG MET A 71 3.112 -63.433 -30.774 1.00 -0.54 \ ATOM 165 SD MET A 71 3.311 -63.912 -29.048 1.00 -0.54 \ ATOM 166 CE MET A 71 2.790 -62.418 -28.214 1.00 -0.54 \ ATOM 167 N LYS A 72 5.685 -60.766 -33.657 1.00 0.35 \ ATOM 168 CA LYS A 72 6.514 -59.648 -34.087 1.00 0.35 \ ATOM 169 C LYS A 72 5.797 -58.833 -35.165 1.00 0.35 \ ATOM 170 O LYS A 72 5.933 -57.611 -35.204 1.00 0.35 \ ATOM 171 CB LYS A 72 7.863 -60.154 -34.606 1.00 0.35 \ ATOM 172 CG LYS A 72 8.885 -59.060 -34.923 1.00 0.35 \ ATOM 173 CD LYS A 72 8.783 -58.515 -36.350 1.00 0.35 \ ATOM 174 CE LYS A 72 9.159 -59.548 -37.397 1.00 0.35 \ ATOM 175 NZ LYS A 72 8.959 -59.013 -38.767 1.00 0.35 \ ATOM 176 N ALA A 73 5.035 -59.542 -36.002 1.00 0.27 \ ATOM 177 CA ALA A 73 4.352 -59.033 -37.206 1.00 0.27 \ ATOM 178 C ALA A 73 5.253 -59.229 -38.426 1.00 0.27 \ ATOM 179 O ALA A 73 6.201 -58.468 -38.627 1.00 0.27 \ ATOM 180 CB ALA A 73 3.947 -57.562 -37.072 1.00 0.27 \ ATOM 181 N PRO A 74 4.960 -60.254 -39.247 1.00 0.56 \ ATOM 182 CA PRO A 74 5.818 -60.526 -40.405 1.00 0.56 \ ATOM 183 C PRO A 74 5.731 -59.453 -41.485 1.00 0.56 \ ATOM 184 O PRO A 74 4.692 -58.811 -41.632 1.00 0.56 \ ATOM 185 CB PRO A 74 5.282 -61.859 -40.931 1.00 0.56 \ ATOM 186 CG PRO A 74 3.868 -61.893 -40.496 1.00 0.56 \ ATOM 187 CD PRO A 74 3.837 -61.206 -39.165 1.00 0.56 \ ATOM 188 N THR A 75 6.818 -59.276 -42.229 1.00 -0.35 \ ATOM 189 CA THR A 75 6.852 -58.344 -43.353 1.00 -0.35 \ ATOM 190 C THR A 75 6.624 -59.089 -44.661 1.00 -0.35 \ ATOM 191 O THR A 75 6.751 -60.313 -44.717 1.00 -0.35 \ ATOM 192 CB THR A 75 8.196 -57.602 -43.439 1.00 -0.35 \ ATOM 193 OG1 THR A 75 9.225 -58.523 -43.815 1.00 -0.35 \ ATOM 194 CG2 THR A 75 8.548 -56.955 -42.106 1.00 -0.35 \ ATOM 195 N ALA A 76 6.295 -58.346 -45.712 1.00 -1.13 \ ATOM 196 CA ALA A 76 6.087 -58.932 -47.030 1.00 -1.13 \ ATOM 197 C ALA A 76 7.342 -59.653 -47.512 1.00 -1.13 \ ATOM 198 O ALA A 76 7.262 -60.716 -48.131 1.00 -1.13 \ ATOM 199 CB ALA A 76 5.679 -57.859 -48.025 1.00 -1.13 \ ATOM 200 N ASP A 77 8.502 -59.073 -47.225 1.00 -0.64 \ ATOM 201 CA ASP A 77 9.771 -59.669 -47.621 1.00 -0.64 \ ATOM 202 C ASP A 77 10.014 -60.985 -46.892 1.00 -0.64 \ ATOM 203 O ASP A 77 10.518 -61.944 -47.474 1.00 -0.64 \ ATOM 204 CB ASP A 77 10.925 -58.700 -47.349 1.00 -0.64 \ ATOM 205 CG ASP A 77 10.965 -57.544 -48.335 1.00 -0.64 \ ATOM 206 OD1 ASP A 77 10.321 -57.637 -49.402 1.00 -0.64 \ ATOM 207 OD2 ASP A 77 11.649 -56.541 -48.044 1.00 -0.64 \ ATOM 208 N GLU A 78 9.654 -61.028 -45.616 1.00 3.41 \ ATOM 209 CA GLU A 78 9.860 -62.225 -44.811 1.00 3.41 \ ATOM 210 C GLU A 78 8.970 -63.370 -45.284 1.00 3.41 \ ATOM 211 O GLU A 78 9.433 -64.495 -45.459 1.00 3.41 \ ATOM 212 CB GLU A 78 9.598 -61.916 -43.339 1.00 3.41 \ ATOM 213 CG GLU A 78 10.712 -61.110 -42.693 1.00 3.41 \ ATOM 214 CD GLU A 78 10.312 -60.503 -41.363 1.00 3.41 \ ATOM 215 OE1 GLU A 78 9.140 -60.651 -40.961 1.00 3.41 \ ATOM 216 OE2 GLU A 78 11.174 -59.875 -40.716 1.00 3.41 \ ATOM 217 N VAL A 79 7.692 -63.078 -45.498 1.00 0.17 \ ATOM 218 CA VAL A 79 6.740 -64.083 -45.961 1.00 0.17 \ ATOM 219 C VAL A 79 7.107 -64.557 -47.367 1.00 0.17 \ ATOM 220 O VAL A 79 6.938 -65.731 -47.702 1.00 0.17 \ ATOM 221 CB VAL A 79 5.296 -63.529 -45.948 1.00 0.17 \ ATOM 222 CG1 VAL A 79 4.306 -64.558 -46.484 1.00 0.17 \ ATOM 223 CG2 VAL A 79 4.907 -63.112 -44.538 1.00 0.17 \ ATOM 224 N GLY A 80 7.615 -63.639 -48.183 1.00 -0.86 \ ATOM 225 CA GLY A 80 8.059 -63.974 -49.523 1.00 -0.86 \ ATOM 226 C GLY A 80 9.207 -64.963 -49.501 1.00 -0.86 \ ATOM 227 O GLY A 80 9.301 -65.839 -50.360 1.00 -0.86 \ ATOM 228 N GLU A 81 10.088 -64.827 -48.515 1.00 -1.03 \ ATOM 229 CA GLU A 81 11.193 -65.764 -48.367 1.00 -1.03 \ ATOM 230 C GLU A 81 10.667 -67.136 -47.963 1.00 -1.03 \ ATOM 231 O GLU A 81 11.091 -68.153 -48.510 1.00 -1.03 \ ATOM 232 CB GLU A 81 12.210 -65.253 -47.341 1.00 -1.03 \ ATOM 233 CG GLU A 81 13.085 -64.115 -47.862 1.00 -1.03 \ ATOM 234 CD GLU A 81 14.227 -63.760 -46.923 1.00 -1.03 \ ATOM 235 OE1 GLU A 81 14.505 -64.537 -45.985 1.00 -1.03 \ ATOM 236 OE2 GLU A 81 14.851 -62.698 -47.127 1.00 -1.03 \ """, "e5c2lA1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5c2lA1_csv", state=0, origin=1) cmd.zoom("e5c2lA1_csv", animate=-1)