cmd.read_pdbstr("""\ ATOM 1 N GLY A 1 -7.246 -25.805 8.018 0.96 0.33 \ ATOM 2 CA GLY A 1 -8.247 -25.692 6.968 0.96 0.33 \ ATOM 3 C GLY A 1 -8.086 -24.380 6.215 0.96 0.33 \ ATOM 4 O GLY A 1 -6.997 -23.786 6.239 0.96 0.33 \ ATOM 5 N ILE A 2 -9.153 -23.913 5.562 1.00 0.44 \ ATOM 6 CA ILE A 2 -9.013 -22.752 4.695 1.00 0.44 \ ATOM 7 C ILE A 2 -8.723 -21.489 5.517 1.00 0.44 \ ATOM 8 O ILE A 2 -8.013 -20.586 5.061 1.00 0.44 \ ATOM 9 CB ILE A 2 -10.262 -22.547 3.797 1.00 0.44 \ ATOM 10 CG1 ILE A 2 -9.993 -21.463 2.751 1.00 0.44 \ ATOM 11 CG2 ILE A 2 -11.525 -22.259 4.637 1.00 0.44 \ ATOM 12 CD1 ILE A 2 -11.131 -21.307 1.741 1.00 0.44 \ ATOM 13 N VAL A 3 -9.237 -21.432 6.741 1.00 1.08 \ ATOM 14 CA VAL A 3 -8.984 -20.258 7.569 1.00 1.08 \ ATOM 15 C VAL A 3 -7.485 -20.141 7.917 1.00 1.08 \ ATOM 16 O VAL A 3 -6.905 -19.050 7.880 1.00 1.08 \ ATOM 17 CB VAL A 3 -9.823 -20.298 8.860 1.00 1.08 \ ATOM 18 CG1 VAL A 3 -9.343 -19.217 9.821 1.00 1.08 \ ATOM 19 CG2 VAL A 3 -11.312 -20.148 8.506 1.00 1.08 \ ATOM 20 N GLU A 4 -6.865 -21.277 8.243 0.86 0.21 \ ATOM 21 CA GLU A 4 -5.448 -21.291 8.593 1.00 0.21 \ ATOM 22 C GLU A 4 -4.582 -20.890 7.400 1.00 0.21 \ ATOM 23 O GLU A 4 -3.628 -20.126 7.569 1.00 0.21 \ ATOM 24 CB GLU A 4 -5.028 -22.671 9.103 1.00 0.21 \ ATOM 25 CG GLU A 4 -5.543 -22.997 10.506 1.00 0.21 \ ATOM 26 CD GLU A 4 -7.026 -23.399 10.550 1.00 0.21 \ ATOM 27 OE1 GLU A 4 -7.598 -23.809 9.507 1.00 0.21 \ ATOM 28 OE2 GLU A 4 -7.621 -23.309 11.649 1.00 0.21 \ ATOM 29 N GLN A 5 -4.928 -21.395 6.212 0.96 0.00 \ ATOM 30 CA GLN A 5 -4.136 -21.143 4.991 0.96 0.00 \ ATOM 31 C GLN A 5 -4.350 -19.754 4.349 0.96 0.00 \ ATOM 32 O GLN A 5 -3.428 -19.224 3.712 0.96 0.00 \ ATOM 33 CB GLN A 5 -4.422 -22.218 3.930 0.96 0.00 \ ATOM 34 CG GLN A 5 -4.170 -23.658 4.386 0.96 0.00 \ ATOM 35 CD GLN A 5 -2.779 -23.854 5.026 0.96 0.00 \ ATOM 36 OE1 GLN A 5 -1.772 -23.334 4.535 0.96 0.00 \ ATOM 37 NE2 GLN A 5 -2.729 -24.607 6.127 0.96 0.00 \ ATOM 38 N CYS A 6 -5.545 -19.168 4.499 1.00 1.70 \ ATOM 39 CA CYS A 6 -5.880 -17.943 3.760 1.00 1.70 \ ATOM 40 C CYS A 6 -6.191 -16.722 4.637 1.00 1.70 \ ATOM 41 O CYS A 6 -6.101 -15.583 4.164 1.00 1.70 \ ATOM 42 CB CYS A 6 -7.068 -18.228 2.819 1.00 1.70 \ ATOM 43 SG CYS A 6 -6.553 -19.131 1.299 1.00 1.70 \ ATOM 44 N CYS A 7 -6.533 -16.953 5.905 1.00 1.70 \ ATOM 45 CA CYS A 7 -6.858 -15.855 6.825 1.00 1.70 \ ATOM 46 C CYS A 7 -5.674 -15.560 7.759 1.00 1.70 \ ATOM 47 O CYS A 7 -5.130 -14.456 7.738 1.00 1.70 \ ATOM 48 CB CYS A 7 -8.129 -16.177 7.641 1.00 1.70 \ ATOM 49 SG CYS A 7 -8.552 -14.876 8.889 1.00 1.70 \ ATOM 50 N THR A 8 -5.253 -16.547 8.555 1.00 -0.68 \ ATOM 51 CA THR A 8 -4.107 -16.403 9.457 0.46 -0.68 \ ATOM 52 C THR A 8 -2.791 -16.273 8.687 1.00 -0.68 \ ATOM 53 O THR A 8 -1.855 -15.617 9.127 0.81 -0.68 \ ATOM 54 CB THR A 8 -4.005 -17.607 10.422 0.46 -0.68 \ ATOM 55 OG1 THR A 8 -5.298 -17.904 10.960 0.46 -0.68 \ ATOM 56 CG2 THR A 8 -3.036 -17.308 11.557 0.46 -0.68 \ ATOM 57 N SER A 9 -2.707 -16.932 7.530 1.00 -0.80 \ ATOM 58 CA SER A 9 -1.562 -16.788 6.626 0.36 -0.80 \ ATOM 59 C SER A 9 -2.018 -16.244 5.269 0.72 -0.80 \ ATOM 60 O SER A 9 -3.220 -16.115 5.020 0.93 -0.80 \ ATOM 61 CB SER A 9 -0.841 -18.128 6.442 0.36 -0.80 \ ATOM 62 OG SER A 9 -0.548 -18.726 7.692 0.36 -0.80 \ ATOM 63 N ILE A 10 -1.074 -15.947 4.376 1.00 -0.79 \ ATOM 64 CA ILE A 10 -1.440 -15.317 3.104 1.00 -0.79 \ ATOM 65 C ILE A 10 -2.008 -16.342 2.130 1.00 -0.79 \ ATOM 66 O ILE A 10 -1.445 -17.413 1.971 1.00 -0.79 \ ATOM 67 CB ILE A 10 -0.241 -14.599 2.465 1.00 -0.79 \ ATOM 68 CG1 ILE A 10 0.225 -13.471 3.387 1.00 -0.79 \ ATOM 69 CG2 ILE A 10 -0.596 -14.042 1.084 1.00 -0.79 \ ATOM 70 CD1 ILE A 10 1.573 -12.896 2.971 1.00 -0.79 \ ATOM 71 N CYS A 11 -3.140 -16.007 1.513 0.97 1.70 \ ATOM 72 CA CYS A 11 -3.841 -16.920 0.610 0.97 1.70 \ ATOM 73 C CYS A 11 -3.111 -17.052 -0.743 0.97 1.70 \ ATOM 74 O CYS A 11 -2.166 -16.321 -1.014 0.97 1.70 \ ATOM 75 CB CYS A 11 -5.278 -16.421 0.389 0.97 1.70 \ ATOM 76 SG CYS A 11 -6.469 -17.697 -0.092 0.97 1.70 \ ATOM 77 N SER A 12 -3.568 -17.972 -1.595 1.00 -0.16 \ ATOM 78 CA SER A 12 -3.051 -18.076 -2.968 1.00 -0.16 \ ATOM 79 C SER A 12 -4.117 -18.666 -3.883 1.00 -0.16 \ ATOM 80 O SER A 12 -5.026 -19.324 -3.406 1.00 -0.16 \ ATOM 81 CB SER A 12 -1.808 -18.954 -3.004 1.00 -0.16 \ ATOM 82 OG SER A 12 -2.125 -20.327 -2.793 1.00 -0.16 \ ATOM 83 N LEU A 13 -3.977 -18.474 -5.191 1.00 -0.38 \ ATOM 84 CA LEU A 13 -4.988 -18.979 -6.140 1.00 -0.38 \ ATOM 85 C LEU A 13 -5.053 -20.506 -6.123 1.00 -0.38 \ ATOM 86 O LEU A 13 -6.133 -21.104 -6.193 1.00 -0.38 \ ATOM 87 CB LEU A 13 -4.680 -18.477 -7.555 1.00 -0.38 \ ATOM 88 CG LEU A 13 -5.641 -18.927 -8.656 1.00 -0.38 \ ATOM 89 CD1 LEU A 13 -7.055 -18.503 -8.331 1.00 -0.38 \ ATOM 90 CD2 LEU A 13 -5.198 -18.324 -9.978 1.00 -0.38 \ ATOM 91 N TYR A 14 -3.883 -21.128 -6.020 0.94 -1.24 \ ATOM 92 CA TYR A 14 -3.771 -22.577 -5.929 0.94 -1.24 \ ATOM 93 C TYR A 14 -4.663 -23.125 -4.824 0.94 -1.24 \ ATOM 94 O TYR A 14 -5.420 -24.078 -5.029 0.94 -1.24 \ ATOM 95 CB TYR A 14 -2.313 -22.960 -5.660 0.94 -1.24 \ ATOM 96 CG TYR A 14 -2.060 -24.448 -5.686 0.94 -1.24 \ ATOM 97 CD1 TYR A 14 -1.423 -25.049 -6.778 0.94 -1.24 \ ATOM 98 CD2 TYR A 14 -2.438 -25.252 -4.614 0.94 -1.24 \ ATOM 99 CE1 TYR A 14 -1.197 -26.423 -6.798 0.94 -1.24 \ ATOM 100 CE2 TYR A 14 -2.228 -26.611 -4.626 0.94 -1.24 \ ATOM 101 CZ TYR A 14 -1.602 -27.195 -5.708 0.94 -1.24 \ ATOM 102 OH TYR A 14 -1.400 -28.555 -5.695 0.94 -1.24 \ ATOM 103 N GLN A 15 -4.550 -22.523 -3.636 0.97 -0.57 \ ATOM 104 CA GLN A 15 -5.325 -22.967 -2.472 0.97 -0.57 \ ATOM 105 C GLN A 15 -6.827 -22.693 -2.586 0.97 -0.57 \ ATOM 106 O GLN A 15 -7.648 -23.550 -2.232 0.97 -0.57 \ ATOM 107 CB GLN A 15 -4.779 -22.305 -1.202 0.97 -0.57 \ ATOM 108 CG GLN A 15 -3.415 -22.821 -0.827 0.97 -0.57 \ ATOM 109 CD GLN A 15 -3.491 -24.235 -0.323 0.97 -0.57 \ ATOM 110 OE1 GLN A 15 -4.384 -24.566 0.461 0.97 -0.57 \ ATOM 111 NE2 GLN A 15 -2.569 -25.091 -0.781 0.97 -0.57 \ ATOM 112 N LEU A 16 -7.197 -21.516 -3.084 1.00 0.77 \ ATOM 113 CA LEU A 16 -8.624 -21.223 -3.244 1.00 0.77 \ ATOM 114 C LEU A 16 -9.322 -22.222 -4.179 1.00 0.77 \ ATOM 115 O LEU A 16 -10.435 -22.677 -3.903 1.00 0.77 \ ATOM 116 CB LEU A 16 -8.830 -19.804 -3.791 1.00 0.77 \ ATOM 117 CG LEU A 16 -8.671 -18.672 -2.792 1.00 0.77 \ ATOM 118 CD1 LEU A 16 -8.591 -17.359 -3.564 1.00 0.77 \ ATOM 119 CD2 LEU A 16 -9.830 -18.660 -1.808 1.00 0.77 \ ATOM 120 N GLU A 17 -8.671 -22.566 -5.294 1.00 0.32 \ ATOM 121 CA GLU A 17 -9.323 -23.426 -6.278 1.00 0.32 \ ATOM 122 C GLU A 17 -9.545 -24.839 -5.719 1.00 0.32 \ ATOM 123 O GLU A 17 -10.379 -25.569 -6.236 1.00 0.32 \ ATOM 124 CB GLU A 17 -8.527 -23.472 -7.589 1.00 0.32 \ ATOM 125 CG GLU A 17 -8.766 -22.246 -8.472 1.00 0.32 \ ATOM 126 CD GLU A 17 -8.300 -22.442 -9.924 1.00 0.32 \ ATOM 127 OE1 GLU A 17 -7.327 -23.202 -10.174 1.00 0.32 \ ATOM 128 OE2 GLU A 17 -8.904 -21.829 -10.822 1.00 0.32 \ ATOM 129 N ASN A 18 -8.809 -25.217 -4.675 1.00 -0.96 \ ATOM 130 CA ASN A 18 -9.064 -26.513 -4.030 1.00 -0.96 \ ATOM 131 C ASN A 18 -10.461 -26.595 -3.419 1.00 -0.96 \ ATOM 132 O ASN A 18 -10.945 -27.694 -3.124 1.00 -0.96 \ ATOM 133 CB ASN A 18 -8.031 -26.787 -2.948 1.00 -0.96 \ ATOM 134 CG ASN A 18 -6.669 -27.196 -3.526 1.00 -0.96 \ ATOM 135 OD1 ASN A 18 -6.573 -27.671 -4.666 1.00 -0.96 \ ATOM 136 ND2 ASN A 18 -5.618 -27.007 -2.740 1.00 -0.96 \ ATOM 137 N TYR A 19 -11.096 -25.443 -3.195 1.00 1.17 \ ATOM 138 CA TYR A 19 -12.421 -25.438 -2.554 1.00 1.17 \ ATOM 139 C TYR A 19 -13.574 -25.163 -3.536 1.00 1.17 \ ATOM 140 O TYR A 19 -14.733 -25.035 -3.120 1.00 1.17 \ ATOM 141 CB TYR A 19 -12.440 -24.427 -1.398 1.00 1.17 \ ATOM 142 CG TYR A 19 -11.516 -24.826 -0.270 1.00 1.17 \ ATOM 143 CD1 TYR A 19 -10.174 -24.461 -0.284 1.00 1.17 \ ATOM 144 CD2 TYR A 19 -11.973 -25.617 0.789 1.00 1.17 \ ATOM 145 CE1 TYR A 19 -9.323 -24.838 0.729 1.00 1.17 \ ATOM 146 CE2 TYR A 19 -11.130 -26.000 1.809 1.00 1.17 \ ATOM 147 CZ TYR A 19 -9.805 -25.616 1.768 1.00 1.17 \ ATOM 148 OH TYR A 19 -8.948 -25.980 2.775 1.00 1.17 \ ATOM 149 N CYS A 20 -13.274 -25.068 -4.835 0.96 1.70 \ ATOM 150 CA CYS A 20 -14.343 -25.004 -5.844 0.96 1.70 \ ATOM 151 C CYS A 20 -14.985 -26.380 -5.998 0.96 1.70 \ ATOM 152 O CYS A 20 -14.325 -27.392 -5.747 0.96 1.70 \ ATOM 153 CB CYS A 20 -13.818 -24.533 -7.204 0.96 1.70 \ ATOM 154 SG CYS A 20 -13.010 -22.932 -7.224 0.96 1.70 \ ATOM 155 N ASN A 21 -16.248 -26.433 -6.415 0.91 0.17 \ ATOM 156 CA ASN A 21 -16.884 -27.735 -6.696 0.91 0.17 \ ATOM 157 C ASN A 21 -16.483 -28.275 -8.055 0.91 0.17 \ ATOM 158 O ASN A 21 -15.883 -27.596 -8.894 0.91 0.17 \ ATOM 159 CB ASN A 21 -18.414 -27.662 -6.658 0.91 0.17 \ ATOM 160 CG ASN A 21 -18.951 -27.265 -5.310 0.91 0.17 \ ATOM 161 OD1 ASN A 21 -18.528 -27.784 -4.282 0.91 0.17 \ ATOM 162 ND2 ASN A 21 -19.891 -26.324 -5.305 0.91 0.17 \ ATOM 163 OXT ASN A 21 -16.796 -29.422 -8.345 0.91 0.17 \ """, "e5d52A1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5d52A1_csv", state=0, origin=1) cmd.zoom("e5d52A1_csv", animate=-1)