cmd.read_pdbstr("""\ ATOM 1 N GLY A 1 -7.091 -25.647 7.780 0.73 0.33 \ ATOM 2 CA GLY A 1 -8.154 -25.375 6.829 0.73 0.33 \ ATOM 3 C GLY A 1 -7.916 -24.108 6.031 0.73 0.33 \ ATOM 4 O GLY A 1 -6.791 -23.616 5.957 0.73 0.33 \ ATOM 5 N ILE A 2 -8.979 -23.571 5.440 0.85 0.44 \ ATOM 6 CA ILE A 2 -8.869 -22.391 4.587 0.85 0.44 \ ATOM 7 C ILE A 2 -8.558 -21.130 5.395 0.85 0.44 \ ATOM 8 O ILE A 2 -7.895 -20.214 4.905 0.85 0.44 \ ATOM 9 CB ILE A 2 -10.163 -22.175 3.759 0.85 0.44 \ ATOM 10 CG1 ILE A 2 -9.959 -21.065 2.725 0.85 0.44 \ ATOM 11 CG2 ILE A 2 -11.365 -21.892 4.664 0.85 0.44 \ ATOM 12 CD1 ILE A 2 -11.134 -20.867 1.798 0.85 0.44 \ ATOM 13 N VAL A 3 -9.028 -21.093 6.636 0.90 1.08 \ ATOM 14 CA VAL A 3 -8.790 -19.953 7.510 0.90 1.08 \ ATOM 15 C VAL A 3 -7.307 -19.848 7.851 0.90 1.08 \ ATOM 16 O VAL A 3 -6.729 -18.761 7.859 0.90 1.08 \ ATOM 17 CB VAL A 3 -9.619 -20.059 8.808 0.90 1.08 \ ATOM 18 CG1 VAL A 3 -9.177 -19.014 9.824 0.90 1.08 \ ATOM 19 CG2 VAL A 3 -11.105 -19.922 8.500 0.90 1.08 \ ATOM 20 N GLU A 4 -6.691 -20.994 8.118 0.74 0.21 \ ATOM 21 CA GLU A 4 -5.277 -21.035 8.462 1.00 0.21 \ ATOM 22 C GLU A 4 -4.406 -20.640 7.274 0.95 0.21 \ ATOM 23 O GLU A 4 -3.359 -20.016 7.445 0.84 0.21 \ ATOM 24 CB GLU A 4 -4.881 -22.427 8.963 1.00 0.21 \ ATOM 25 CG GLU A 4 -5.421 -22.789 10.342 1.00 0.21 \ ATOM 26 CD GLU A 4 -6.928 -22.965 10.363 1.00 0.21 \ ATOM 27 OE1 GLU A 4 -7.486 -23.457 9.358 1.00 0.21 \ ATOM 28 OE2 GLU A 4 -7.554 -22.607 11.384 1.00 0.21 \ ATOM 29 N GLN A 5 -4.850 -20.995 6.072 0.81 0.00 \ ATOM 30 CA GLN A 5 -4.065 -20.761 4.867 0.81 0.00 \ ATOM 31 C GLN A 5 -4.282 -19.377 4.260 0.81 0.00 \ ATOM 32 O GLN A 5 -3.368 -18.813 3.657 0.81 0.00 \ ATOM 33 CB GLN A 5 -4.383 -21.831 3.820 0.81 0.00 \ ATOM 34 CG GLN A 5 -4.122 -23.261 4.280 0.81 0.00 \ ATOM 35 CD GLN A 5 -2.710 -23.475 4.800 0.81 0.00 \ ATOM 36 OE1 GLN A 5 -2.496 -24.215 5.761 0.81 0.00 \ ATOM 37 NE2 GLN A 5 -1.738 -22.840 4.155 0.81 0.00 \ ATOM 38 N CYS A 6 -5.481 -18.825 4.420 0.83 1.70 \ ATOM 39 CA CYS A 6 -5.827 -17.589 3.725 0.83 1.70 \ ATOM 40 C CYS A 6 -6.147 -16.408 4.641 0.83 1.70 \ ATOM 41 O CYS A 6 -6.087 -15.259 4.206 0.83 1.70 \ ATOM 42 CB CYS A 6 -7.008 -17.839 2.787 0.83 1.70 \ ATOM 43 SG CYS A 6 -6.577 -18.822 1.334 0.83 1.70 \ ATOM 44 N CYS A 7 -6.483 -16.678 5.899 0.83 1.70 \ ATOM 45 CA CYS A 7 -6.819 -15.600 6.829 0.83 1.70 \ ATOM 46 C CYS A 7 -5.650 -15.258 7.754 0.83 1.70 \ ATOM 47 O CYS A 7 -5.191 -14.115 7.789 0.83 1.70 \ ATOM 48 CB CYS A 7 -8.053 -15.967 7.657 0.83 1.70 \ ATOM 49 SG CYS A 7 -8.489 -14.742 8.913 0.83 1.70 \ ATOM 50 N THR A 8 -5.173 -16.248 8.504 0.90 -0.68 \ ATOM 51 CA THR A 8 -4.045 -16.074 9.415 0.59 -0.68 \ ATOM 52 C THR A 8 -2.742 -15.911 8.635 0.99 -0.68 \ ATOM 53 O THR A 8 -1.821 -15.216 9.064 0.83 -0.68 \ ATOM 54 CB THR A 8 -3.922 -17.270 10.385 0.59 -0.68 \ ATOM 55 OG1 THR A 8 -5.180 -17.496 11.032 0.59 -0.68 \ ATOM 56 CG2 THR A 8 -2.859 -17.007 11.440 0.59 -0.68 \ ATOM 57 N SER A 9 -2.669 -16.576 7.487 0.86 -0.80 \ ATOM 58 CA SER A 9 -1.529 -16.436 6.589 0.50 -0.80 \ ATOM 59 C SER A 9 -1.987 -15.855 5.255 0.73 -0.80 \ ATOM 60 O SER A 9 -3.183 -15.796 4.978 0.83 -0.80 \ ATOM 61 CB SER A 9 -0.834 -17.783 6.375 0.50 -0.80 \ ATOM 62 OG SER A 9 -0.349 -18.310 7.598 0.50 -0.80 \ ATOM 63 N ILE A 10 -1.036 -15.428 4.431 0.78 -0.79 \ ATOM 64 CA ILE A 10 -1.365 -14.841 3.134 0.78 -0.79 \ ATOM 65 C ILE A 10 -1.966 -15.873 2.180 0.78 -0.79 \ ATOM 66 O ILE A 10 -1.398 -16.944 1.960 0.78 -0.79 \ ATOM 67 CB ILE A 10 -0.127 -14.198 2.475 0.78 -0.79 \ ATOM 68 CG1 ILE A 10 0.428 -13.079 3.361 0.78 -0.79 \ ATOM 69 CG2 ILE A 10 -0.471 -13.656 1.096 0.78 -0.79 \ ATOM 70 CD1 ILE A 10 1.733 -12.496 2.856 0.78 -0.79 \ ATOM 71 N CYS A 11 -3.123 -15.535 1.617 0.81 1.70 \ ATOM 72 CA CYS A 11 -3.846 -16.427 0.719 0.81 1.70 \ ATOM 73 C CYS A 11 -3.191 -16.482 -0.656 0.81 1.70 \ ATOM 74 O CYS A 11 -2.282 -15.708 -0.952 0.81 1.70 \ ATOM 75 CB CYS A 11 -5.302 -15.976 0.586 0.81 1.70 \ ATOM 76 SG CYS A 11 -6.439 -17.265 0.034 0.81 1.70 \ ATOM 77 N SER A 12 -3.657 -17.402 -1.493 0.90 -0.16 \ ATOM 78 CA SER A 12 -3.144 -17.529 -2.851 0.90 -0.16 \ ATOM 79 C SER A 12 -4.218 -18.076 -3.779 0.90 -0.16 \ ATOM 80 O SER A 12 -5.181 -18.694 -3.326 0.90 -0.16 \ ATOM 81 CB SER A 12 -1.910 -18.433 -2.882 0.90 -0.16 \ ATOM 82 OG SER A 12 -2.252 -19.776 -2.589 0.90 -0.16 \ ATOM 83 N LEU A 13 -4.048 -17.846 -5.077 0.82 -0.38 \ ATOM 84 CA LEU A 13 -4.988 -18.353 -6.070 0.82 -0.38 \ ATOM 85 C LEU A 13 -4.986 -19.876 -6.076 0.82 -0.38 \ ATOM 86 O LEU A 13 -6.023 -20.506 -6.291 0.82 -0.38 \ ATOM 87 CB LEU A 13 -4.649 -17.820 -7.465 0.82 -0.38 \ ATOM 88 CG LEU A 13 -5.518 -18.345 -8.613 0.82 -0.38 \ ATOM 89 CD1 LEU A 13 -6.983 -17.993 -8.387 0.82 -0.38 \ ATOM 90 CD2 LEU A 13 -5.039 -17.801 -9.945 0.82 -0.38 \ ATOM 91 N TYR A 14 -3.815 -20.460 -5.835 0.80 -1.24 \ ATOM 92 CA TYR A 14 -3.671 -21.911 -5.788 0.80 -1.24 \ ATOM 93 C TYR A 14 -4.564 -22.515 -4.710 0.80 -1.24 \ ATOM 94 O TYR A 14 -5.308 -23.462 -4.967 0.80 -1.24 \ ATOM 95 CB TYR A 14 -2.208 -22.302 -5.539 0.80 -1.24 \ ATOM 96 CG TYR A 14 -1.961 -23.796 -5.583 0.80 -1.24 \ ATOM 97 CD1 TYR A 14 -1.463 -24.400 -6.728 0.80 -1.24 \ ATOM 98 CD2 TYR A 14 -2.225 -24.601 -4.479 0.80 -1.24 \ ATOM 99 CE1 TYR A 14 -1.241 -25.762 -6.777 0.80 -1.24 \ ATOM 100 CE2 TYR A 14 -2.008 -25.963 -4.519 0.80 -1.24 \ ATOM 101 CZ TYR A 14 -1.516 -26.537 -5.671 0.80 -1.24 \ ATOM 102 OH TYR A 14 -1.293 -27.893 -5.718 0.80 -1.24 \ ATOM 103 N GLN A 15 -4.481 -21.964 -3.504 0.79 -0.57 \ ATOM 104 CA GLN A 15 -5.223 -22.492 -2.366 0.79 -0.57 \ ATOM 105 C GLN A 15 -6.726 -22.250 -2.478 0.79 -0.57 \ ATOM 106 O GLN A 15 -7.525 -23.098 -2.083 0.79 -0.57 \ ATOM 107 CB GLN A 15 -4.698 -21.883 -1.066 0.79 -0.57 \ ATOM 108 CG GLN A 15 -3.388 -22.484 -0.592 0.79 -0.57 \ ATOM 109 CD GLN A 15 -3.519 -23.957 -0.258 0.79 -0.57 \ ATOM 110 OE1 GLN A 15 -4.455 -24.369 0.429 0.79 -0.57 \ ATOM 111 NE2 GLN A 15 -2.580 -24.760 -0.746 0.79 -0.57 \ ATOM 112 N LEU A 16 -7.108 -21.092 -3.007 0.85 0.77 \ ATOM 113 CA LEU A 16 -8.521 -20.756 -3.159 0.85 0.77 \ ATOM 114 C LEU A 16 -9.229 -21.731 -4.092 0.85 0.77 \ ATOM 115 O LEU A 16 -10.374 -22.110 -3.850 0.85 0.77 \ ATOM 116 CB LEU A 16 -8.691 -19.326 -3.679 0.85 0.77 \ ATOM 117 CG LEU A 16 -8.506 -18.196 -2.665 0.85 0.77 \ ATOM 118 CD1 LEU A 16 -8.518 -16.845 -3.356 0.85 0.77 \ ATOM 119 CD2 LEU A 16 -9.580 -18.259 -1.587 0.85 0.77 \ ATOM 120 N GLU A 17 -8.540 -22.143 -5.152 0.78 0.32 \ ATOM 121 CA GLU A 17 -9.123 -23.048 -6.138 0.78 0.32 \ ATOM 122 C GLU A 17 -9.256 -24.476 -5.609 0.78 0.32 \ ATOM 123 O GLU A 17 -9.918 -25.312 -6.225 0.78 0.32 \ ATOM 124 CB GLU A 17 -8.297 -23.038 -7.427 0.78 0.32 \ ATOM 125 CG GLU A 17 -8.514 -21.796 -8.283 0.78 0.32 \ ATOM 126 CD GLU A 17 -8.078 -21.987 -9.724 0.78 0.32 \ ATOM 127 OE1 GLU A 17 -7.212 -22.849 -9.975 0.78 0.32 \ ATOM 128 OE2 GLU A 17 -8.602 -21.272 -10.607 0.78 0.32 \ ATOM 129 N ASN A 18 -8.635 -24.751 -4.466 0.79 -0.96 \ ATOM 130 CA ASN A 18 -8.782 -26.048 -3.812 0.79 -0.96 \ ATOM 131 C ASN A 18 -10.171 -26.221 -3.205 0.79 -0.96 \ ATOM 132 O ASN A 18 -10.546 -27.319 -2.795 0.79 -0.96 \ ATOM 133 CB ASN A 18 -7.722 -26.231 -2.721 0.79 -0.96 \ ATOM 134 CG ASN A 18 -6.380 -26.663 -3.275 0.79 -0.96 \ ATOM 135 OD1 ASN A 18 -6.303 -27.267 -4.344 0.79 -0.96 \ ATOM 136 ND2 ASN A 18 -5.313 -26.363 -2.543 0.79 -0.96 \ ATOM 137 N TYR A 19 -10.930 -25.131 -3.148 0.83 1.17 \ ATOM 138 CA TYR A 19 -12.241 -25.155 -2.512 0.83 1.17 \ ATOM 139 C TYR A 19 -13.370 -24.891 -3.501 0.83 1.17 \ ATOM 140 O TYR A 19 -14.520 -24.706 -3.104 0.83 1.17 \ ATOM 141 CB TYR A 19 -12.287 -24.140 -1.368 0.83 1.17 \ ATOM 142 CG TYR A 19 -11.292 -24.447 -0.274 0.83 1.17 \ ATOM 143 CD1 TYR A 19 -10.035 -23.856 -0.264 0.83 1.17 \ ATOM 144 CD2 TYR A 19 -11.602 -25.346 0.737 0.83 1.17 \ ATOM 145 CE1 TYR A 19 -9.119 -24.144 0.732 0.83 1.17 \ ATOM 146 CE2 TYR A 19 -10.696 -25.640 1.734 0.83 1.17 \ ATOM 147 CZ TYR A 19 -9.457 -25.038 1.729 0.83 1.17 \ ATOM 148 OH TYR A 19 -8.558 -25.336 2.728 0.83 1.17 \ ATOM 149 N CYS A 20 -13.040 -24.877 -4.789 0.83 1.70 \ ATOM 150 CA CYS A 20 -14.058 -24.796 -5.828 0.83 1.70 \ ATOM 151 C CYS A 20 -14.676 -26.173 -6.055 0.83 1.70 \ ATOM 152 O CYS A 20 -14.023 -27.197 -5.850 0.83 1.70 \ ATOM 153 CB CYS A 20 -13.467 -24.254 -7.133 0.83 1.70 \ ATOM 154 SG CYS A 20 -12.787 -22.577 -7.025 0.83 1.70 \ ATOM 155 N ASN A 21 -15.939 -26.195 -6.469 0.77 0.17 \ ATOM 156 CA ASN A 21 -16.628 -27.450 -6.745 0.77 0.17 \ ATOM 157 C ASN A 21 -16.178 -28.067 -8.065 0.77 0.17 \ ATOM 158 O ASN A 21 -15.632 -27.386 -8.933 0.77 0.17 \ ATOM 159 CB ASN A 21 -18.142 -27.238 -6.760 0.77 0.17 \ ATOM 160 CG ASN A 21 -18.697 -26.903 -5.391 0.77 0.17 \ ATOM 161 OD1 ASN A 21 -18.330 -27.520 -4.392 0.77 0.17 \ ATOM 162 ND2 ASN A 21 -19.587 -25.919 -5.339 0.77 0.17 \ ATOM 163 OXT ASN A 21 -16.351 -29.264 -8.295 0.77 0.17 \ """, "e5d5eA1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5d5eA1_csv", state=0, origin=1) cmd.zoom("e5d5eA1_csv", animate=-1)