cmd.read_pdbstr("""\ ATOM 1 N MET q 1 227.065 1.067 237.246 1.00 -1.00 \ ATOM 2 CA MET q 1 226.825 0.520 235.912 1.00 -1.00 \ ATOM 3 C MET q 1 227.740 1.116 234.840 1.00 -1.00 \ ATOM 4 O MET q 1 228.311 2.191 235.017 1.00 -1.00 \ ATOM 5 CB MET q 1 225.374 0.743 235.516 1.00 -1.00 \ ATOM 6 CG MET q 1 224.951 2.191 235.610 1.00 -1.00 \ ATOM 7 SD MET q 1 223.172 2.381 235.640 1.00 -1.00 \ ATOM 8 CE MET q 1 222.727 1.334 234.260 1.00 -1.00 \ ATOM 9 N ARG q 2 227.862 0.402 233.725 1.00 0.39 \ ATOM 10 CA ARG q 2 228.729 0.818 232.630 1.00 0.39 \ ATOM 11 C ARG q 2 228.274 2.174 232.109 1.00 0.39 \ ATOM 12 O ARG q 2 227.076 2.442 232.042 1.00 0.39 \ ATOM 13 CB ARG q 2 228.736 -0.237 231.512 1.00 0.39 \ ATOM 14 CG ARG q 2 228.379 0.273 230.124 1.00 0.39 \ ATOM 15 CD ARG q 2 229.294 -0.291 229.033 1.00 0.39 \ ATOM 16 NE ARG q 2 228.858 -1.567 228.461 1.00 0.39 \ ATOM 17 CZ ARG q 2 228.962 -1.887 227.171 1.00 0.39 \ ATOM 18 NH1 ARG q 2 229.472 -1.029 226.301 1.00 0.39 \ ATOM 19 NH2 ARG q 2 228.543 -3.064 226.744 1.00 0.39 \ ATOM 20 N ALA q 3 229.229 3.034 231.767 1.00 0.39 \ ATOM 21 CA ALA q 3 228.918 4.392 231.349 1.00 0.39 \ ATOM 22 C ALA q 3 227.828 4.407 230.294 1.00 0.39 \ ATOM 23 O ALA q 3 226.905 5.220 230.353 1.00 0.39 \ ATOM 24 CB ALA q 3 230.145 5.067 230.834 1.00 0.39 \ ATOM 25 N LYS q 4 227.923 3.477 229.353 1.00 0.39 \ ATOM 26 CA LYS q 4 226.955 3.374 228.256 1.00 0.39 \ ATOM 27 C LYS q 4 225.488 3.149 228.709 1.00 0.39 \ ATOM 28 O LYS q 4 224.546 3.626 228.057 1.00 0.39 \ ATOM 29 CB LYS q 4 227.386 2.253 227.296 1.00 0.39 \ ATOM 30 CG LYS q 4 226.357 1.905 226.236 1.00 0.39 \ ATOM 31 CD LYS q 4 226.916 0.947 225.211 1.00 0.39 \ ATOM 32 CE LYS q 4 227.418 1.689 224.001 1.00 0.39 \ ATOM 33 NZ LYS q 4 227.266 0.855 222.790 1.00 0.39 \ ATOM 34 N TRP q 5 225.301 2.438 229.818 1.00 0.39 \ ATOM 35 CA TRP q 5 223.965 2.111 230.273 1.00 0.39 \ ATOM 36 C TRP q 5 223.450 3.143 231.265 1.00 0.39 \ ATOM 37 O TRP q 5 222.233 3.307 231.409 1.00 0.39 \ ATOM 38 CB TRP q 5 223.934 0.727 230.904 1.00 0.39 \ ATOM 39 CG TRP q 5 224.574 -0.370 230.094 1.00 0.39 \ ATOM 40 CD1 TRP q 5 225.395 -1.349 230.568 1.00 0.39 \ ATOM 41 CD2 TRP q 5 224.440 -0.614 228.683 1.00 0.39 \ ATOM 42 NE1 TRP q 5 225.779 -2.186 229.549 1.00 0.39 \ ATOM 43 CE2 TRP q 5 225.204 -1.755 228.383 1.00 0.39 \ ATOM 44 CE3 TRP q 5 223.747 0.017 227.648 1.00 0.39 \ ATOM 45 CZ2 TRP q 5 225.297 -2.271 227.094 1.00 0.39 \ ATOM 46 CZ3 TRP q 5 223.839 -0.502 226.372 1.00 0.39 \ ATOM 47 CH2 TRP q 5 224.611 -1.628 226.106 1.00 0.39 \ ATOM 48 N ARG q 6 224.365 3.827 231.961 1.00 0.39 \ ATOM 49 CA ARG q 6 223.978 4.930 232.842 1.00 0.39 \ ATOM 50 C ARG q 6 223.470 6.030 231.941 1.00 0.39 \ ATOM 51 O ARG q 6 222.537 6.757 232.279 1.00 0.39 \ ATOM 52 CB ARG q 6 225.141 5.438 233.701 1.00 0.39 \ ATOM 53 CG ARG q 6 224.770 6.618 234.630 1.00 0.39 \ ATOM 54 CD ARG q 6 225.988 7.495 234.994 1.00 0.39 \ ATOM 55 NE ARG q 6 226.068 7.824 236.426 1.00 0.39 \ ATOM 56 CZ ARG q 6 225.785 9.017 236.969 1.00 0.39 \ ATOM 57 NH1 ARG q 6 225.394 10.043 236.210 1.00 0.39 \ ATOM 58 NH2 ARG q 6 225.897 9.195 238.286 1.00 0.39 \ ATOM 59 N LYS q 7 224.104 6.138 230.779 1.00 0.39 \ ATOM 60 CA LYS q 7 223.653 7.053 229.754 1.00 0.39 \ ATOM 61 C LYS q 7 222.224 6.688 229.368 1.00 0.39 \ ATOM 62 O LYS q 7 221.319 7.519 229.458 1.00 0.39 \ ATOM 63 CB LYS q 7 224.585 7.007 228.542 1.00 0.39 \ ATOM 64 CG LYS q 7 224.493 8.231 227.647 1.00 0.39 \ ATOM 65 CD LYS q 7 225.762 8.406 226.839 1.00 0.39 \ ATOM 66 CE LYS q 7 225.575 9.429 225.735 1.00 0.39 \ ATOM 67 NZ LYS q 7 226.743 9.457 224.802 1.00 0.39 \ ATOM 68 N LYS q 8 222.030 5.430 228.971 1.00 0.39 \ ATOM 69 CA LYS q 8 220.728 4.918 228.537 1.00 0.39 \ ATOM 70 C LYS q 8 219.685 5.222 229.587 1.00 0.39 \ ATOM 71 O LYS q 8 218.546 5.555 229.277 1.00 0.39 \ ATOM 72 CB LYS q 8 220.806 3.406 228.278 1.00 0.39 \ ATOM 73 CG LYS q 8 219.613 2.801 227.542 1.00 0.39 \ ATOM 74 CD LYS q 8 219.852 1.328 227.205 1.00 0.39 \ ATOM 75 CE LYS q 8 220.251 1.134 225.748 1.00 0.39 \ ATOM 76 NZ LYS q 8 219.072 1.025 224.842 1.00 0.39 \ ATOM 77 N ARG q 9 220.118 5.131 230.836 1.00 0.39 \ ATOM 78 CA ARG q 9 219.273 5.374 231.990 1.00 0.39 \ ATOM 79 C ARG q 9 218.816 6.822 232.094 1.00 0.39 \ ATOM 80 O ARG q 9 217.650 7.098 232.360 1.00 0.39 \ ATOM 81 CB ARG q 9 220.024 4.973 233.255 1.00 0.39 \ ATOM 82 CG ARG q 9 219.410 5.461 234.536 1.00 0.39 \ ATOM 83 CD ARG q 9 220.474 5.419 235.600 1.00 0.39 \ ATOM 84 NE ARG q 9 220.100 4.631 236.764 1.00 0.39 \ ATOM 85 CZ ARG q 9 219.851 3.327 236.745 1.00 0.39 \ ATOM 86 NH1 ARG q 9 219.908 2.640 235.610 1.00 0.39 \ ATOM 87 NH2 ARG q 9 219.530 2.712 237.874 1.00 0.39 \ ATOM 88 N THR q 10 219.744 7.745 231.887 1.00 -2.46 \ ATOM 89 CA THR q 10 219.443 9.164 232.005 1.00 -2.46 \ ATOM 90 C THR q 10 218.597 9.650 230.839 1.00 -2.46 \ ATOM 91 O THR q 10 217.851 10.617 230.963 1.00 -2.46 \ ATOM 92 CB THR q 10 220.719 10.003 232.073 1.00 -2.46 \ ATOM 93 OG1 THR q 10 221.454 9.821 230.861 1.00 -2.46 \ ATOM 94 CG2 THR q 10 221.581 9.579 233.260 1.00 -2.46 \ ATOM 95 N ARG q 11 218.723 8.984 229.700 1.00 0.39 \ ATOM 96 CA ARG q 11 217.885 9.312 228.558 1.00 0.39 \ ATOM 97 C ARG q 11 216.468 8.767 228.780 1.00 0.39 \ ATOM 98 O ARG q 11 215.487 9.388 228.360 1.00 0.39 \ ATOM 99 CB ARG q 11 218.498 8.777 227.254 1.00 0.39 \ ATOM 100 CG ARG q 11 219.780 9.515 226.853 1.00 0.39 \ ATOM 101 CD ARG q 11 220.236 9.224 225.415 1.00 0.39 \ ATOM 102 NE ARG q 11 221.148 10.262 224.917 1.00 0.39 \ ATOM 103 CZ ARG q 11 222.061 10.081 223.959 1.00 0.39 \ ATOM 104 NH1 ARG q 11 222.208 8.892 223.379 1.00 0.39 \ ATOM 105 NH2 ARG q 11 222.839 11.091 223.584 1.00 0.39 \ ATOM 106 N ARG q 12 216.358 7.620 229.450 1.00 0.39 \ ATOM 107 CA ARG q 12 215.051 7.125 229.863 1.00 0.39 \ ATOM 108 C ARG q 12 214.416 8.137 230.797 1.00 0.39 \ ATOM 109 O ARG q 12 213.256 8.512 230.620 1.00 0.39 \ ATOM 110 CB ARG q 12 215.165 5.758 230.536 1.00 0.39 \ ATOM 111 CG ARG q 12 215.539 4.674 229.556 1.00 0.39 \ ATOM 112 CD ARG q 12 215.747 3.303 230.175 1.00 0.39 \ ATOM 113 NE ARG q 12 216.276 2.401 229.155 1.00 0.39 \ ATOM 114 CZ ARG q 12 216.428 1.090 229.296 1.00 0.39 \ ATOM 115 NH1 ARG q 12 216.079 0.490 230.423 1.00 0.39 \ ATOM 116 NH2 ARG q 12 216.926 0.372 228.298 1.00 0.39 \ ATOM 117 N LEU q 13 215.201 8.593 231.772 1.00 0.39 \ ATOM 118 CA LEU q 13 214.765 9.596 232.741 1.00 0.39 \ ATOM 119 C LEU q 13 214.253 10.875 232.081 1.00 0.39 \ ATOM 120 O LEU q 13 213.192 11.381 232.456 1.00 0.39 \ ATOM 121 CB LEU q 13 215.911 9.942 233.695 1.00 0.39 \ ATOM 122 CG LEU q 13 215.700 9.652 235.183 1.00 0.39 \ ATOM 123 CD1 LEU q 13 217.025 9.627 235.928 1.00 0.39 \ ATOM 124 CD2 LEU q 13 214.766 10.672 235.807 1.00 0.39 \ ATOM 125 N LYS q 14 214.996 11.378 231.093 1.00 0.39 \ ATOM 126 CA LYS q 14 214.731 12.691 230.503 1.00 0.39 \ ATOM 127 C LYS q 14 213.417 12.752 229.745 1.00 0.39 \ ATOM 128 O LYS q 14 212.697 13.744 229.821 1.00 0.39 \ ATOM 129 CB LYS q 14 215.889 13.104 229.589 1.00 0.39 \ ATOM 130 CG LYS q 14 217.064 13.691 230.377 1.00 0.39 \ ATOM 131 CD LYS q 14 218.280 13.977 229.518 1.00 0.39 \ ATOM 132 CE LYS q 14 218.139 15.281 228.752 1.00 0.39 \ ATOM 133 NZ LYS q 14 219.198 15.416 227.706 1.00 0.39 \ ATOM 134 N ARG q 15 213.096 11.691 229.021 1.00 0.39 \ ATOM 135 CA ARG q 15 211.838 11.641 228.289 1.00 0.39 \ ATOM 136 C ARG q 15 210.654 11.522 229.240 1.00 0.39 \ ATOM 137 O ARG q 15 209.567 12.035 228.957 1.00 0.39 \ ATOM 138 CB ARG q 15 211.843 10.477 227.308 1.00 0.39 \ ATOM 139 CG ARG q 15 211.695 10.909 225.883 1.00 0.39 \ ATOM 140 CD ARG q 15 211.841 9.732 224.972 1.00 0.39 \ ATOM 141 NE ARG q 15 212.966 8.909 225.380 1.00 0.39 \ ATOM 142 CZ ARG q 15 213.511 7.973 224.612 1.00 0.39 \ ATOM 143 NH1 ARG q 15 213.029 7.761 223.388 1.00 0.39 \ ATOM 144 NH2 ARG q 15 214.542 7.257 225.062 1.00 0.39 \ ATOM 145 N LYS q 16 210.883 10.835 230.362 1.00 0.39 \ ATOM 146 CA LYS q 16 209.872 10.650 231.396 1.00 0.39 \ ATOM 147 C LYS q 16 209.583 11.971 232.073 1.00 0.39 \ ATOM 148 O LYS q 16 208.452 12.269 232.435 1.00 0.39 \ ATOM 149 CB LYS q 16 210.329 9.624 232.434 1.00 0.39 \ ATOM 150 CG LYS q 16 209.203 9.168 233.368 1.00 0.39 \ ATOM 151 CD LYS q 16 209.683 8.266 234.520 1.00 0.39 \ ATOM 152 CE LYS q 16 210.198 9.075 235.713 1.00 0.39 \ ATOM 153 NZ LYS q 16 210.727 8.219 236.814 1.00 0.39 \ ATOM 154 N ARG q 17 210.631 12.762 232.233 1.00 0.39 \ ATOM 155 CA ARG q 17 210.537 14.044 232.905 1.00 0.39 \ ATOM 156 C ARG q 17 209.956 15.092 231.980 1.00 0.39 \ ATOM 157 O ARG q 17 209.283 16.022 232.422 1.00 0.39 \ ATOM 158 CB ARG q 17 211.915 14.481 233.395 1.00 0.39 \ ATOM 159 CG ARG q 17 211.878 15.284 234.669 1.00 0.39 \ ATOM 160 CD ARG q 17 212.648 14.595 235.763 1.00 0.39 \ ATOM 161 NE ARG q 17 214.077 14.722 235.542 1.00 0.39 \ ATOM 162 CZ ARG q 17 214.997 14.232 236.361 1.00 0.39 \ ATOM 163 NH1 ARG q 17 214.628 13.574 237.454 1.00 0.39 \ ATOM 164 NH2 ARG q 17 216.285 14.398 236.087 1.00 0.39 \ ATOM 165 N ARG q 18 210.240 14.946 230.692 1.00 0.39 \ ATOM 166 CA ARG q 18 209.685 15.834 229.693 1.00 0.39 \ ATOM 167 C ARG q 18 208.181 15.579 229.587 1.00 0.39 \ ATOM 168 O ARG q 18 207.387 16.514 229.554 1.00 0.39 \ ATOM 169 CB ARG q 18 210.385 15.635 228.343 1.00 0.39 \ ATOM 170 CG ARG q 18 209.938 16.617 227.263 1.00 0.39 \ ATOM 171 CD ARG q 18 210.657 16.423 225.923 1.00 0.39 \ ATOM 172 NE ARG q 18 210.074 17.285 224.889 1.00 0.39 \ ATOM 173 CZ ARG q 18 209.366 16.851 223.840 1.00 0.39 \ ATOM 174 NH1 ARG q 18 208.867 17.729 222.968 1.00 0.39 \ ATOM 175 NH2 ARG q 18 209.151 15.543 223.649 1.00 0.39 \ ATOM 176 N LYS q 19 207.796 14.307 229.575 1.00 0.39 \ ATOM 177 CA LYS q 19 206.387 13.915 229.419 1.00 0.39 \ ATOM 178 C LYS q 19 205.485 14.281 230.606 1.00 0.39 \ ATOM 179 O LYS q 19 204.286 14.506 230.433 1.00 0.39 \ ATOM 180 CB LYS q 19 206.284 12.405 229.165 1.00 0.39 \ ATOM 181 CG LYS q 19 206.414 11.993 227.700 1.00 0.39 \ ATOM 182 CD LYS q 19 206.184 10.499 227.559 1.00 0.39 \ ATOM 183 CE LYS q 19 205.796 10.099 226.143 1.00 0.39 \ ATOM 184 NZ LYS q 19 205.273 8.697 226.133 1.00 0.39 \ ATOM 185 N VAL q 20 206.061 14.314 231.805 1.00 -2.46 \ ATOM 186 CA VAL q 20 205.338 14.738 233.002 1.00 -2.46 \ ATOM 187 C VAL q 20 204.982 16.221 232.917 1.00 -2.46 \ ATOM 188 O VAL q 20 203.846 16.607 233.171 1.00 -2.46 \ ATOM 189 CB VAL q 20 206.155 14.483 234.291 1.00 -2.46 \ ATOM 190 CG1 VAL q 20 205.488 15.138 235.486 1.00 -2.46 \ ATOM 191 CG2 VAL q 20 206.327 12.992 234.529 1.00 -2.46 \ ATOM 192 N ARG q 21 205.955 17.048 232.548 1.00 0.39 \ ATOM 193 CA ARG q 21 205.736 18.483 232.430 1.00 0.39 \ ATOM 194 C ARG q 21 204.714 18.781 231.334 1.00 0.39 \ ATOM 195 O ARG q 21 203.956 19.753 231.418 1.00 0.39 \ ATOM 196 CB ARG q 21 207.057 19.204 232.148 1.00 0.39 \ ATOM 197 CG ARG q 21 206.949 20.718 232.162 1.00 0.39 \ ATOM 198 CD ARG q 21 208.197 21.360 232.718 1.00 0.39 \ ATOM 199 NE ARG q 21 208.971 22.076 231.712 1.00 0.39 \ ATOM 200 CZ ARG q 21 209.586 23.230 231.939 1.00 0.39 \ ATOM 201 NH1 ARG q 21 209.506 23.795 233.131 1.00 0.39 \ ATOM 202 NH2 ARG q 21 210.272 23.826 230.980 1.00 0.39 \ ATOM 203 N ALA q 22 204.684 17.922 230.318 1.00 -2.46 \ ATOM 204 CA ALA q 22 203.733 18.044 229.213 1.00 -2.46 \ ATOM 205 C ALA q 22 202.280 18.029 229.698 1.00 -2.46 \ ATOM 206 O ALA q 22 201.377 18.507 229.011 1.00 -2.46 \ ATOM 207 CB ALA q 22 203.963 16.930 228.211 1.00 -2.46 \ ATOM 208 N ARG q 23 202.068 17.474 230.887 1.00 0.39 \ ATOM 209 CA ARG q 23 200.768 17.458 231.535 1.00 0.39 \ ATOM 210 C ARG q 23 200.257 18.873 231.870 1.00 0.39 \ ATOM 211 O ARG q 23 199.158 19.048 232.399 1.00 0.39 \ ATOM 212 CB ARG q 23 200.853 16.616 232.808 1.00 0.39 \ ATOM 213 CG ARG q 23 200.030 15.373 232.785 1.00 0.39 \ ATOM 214 CD ARG q 23 200.889 14.122 232.806 1.00 0.39 \ ATOM 215 NE ARG q 23 201.116 13.594 234.149 1.00 0.39 \ ATOM 216 CZ ARG q 23 200.154 13.228 234.999 1.00 0.39 \ ATOM 217 NH1 ARG q 23 198.862 13.349 234.653 1.00 0.39 \ ATOM 218 NH2 ARG q 23 200.485 12.740 236.207 1.00 0.39 \ ATOM 219 N SER q 24 201.063 19.883 231.576 1.00 -1.00 \ ATOM 220 CA SER q 24 200.712 21.249 231.923 1.00 -1.00 \ ATOM 221 C SER q 24 200.930 22.182 230.732 1.00 -1.00 \ ATOM 222 O SER q 24 201.420 23.306 230.897 1.00 -1.00 \ ATOM 223 CB SER q 24 201.538 21.709 233.128 1.00 -1.00 \ ATOM 224 OG SER q 24 202.633 20.837 233.367 1.00 -1.00 \ ATOM 225 N LYS q 25 200.528 21.711 229.546 1.00 -1.00 \ ATOM 226 CA LYS q 25 200.904 22.289 228.235 1.00 -1.00 \ ATOM 227 C LYS q 25 202.426 22.283 228.095 1.00 -1.00 \ ATOM 228 O LYS q 25 203.094 21.343 228.541 1.00 -1.00 \ ATOM 229 CB LYS q 25 200.357 23.722 228.024 1.00 -1.00 \ ATOM 230 CG LYS q 25 198.817 23.895 228.038 1.00 -1.00 \ ATOM 231 CD LYS q 25 198.052 22.657 227.562 1.00 -1.00 \ ATOM 232 CE LYS q 25 197.314 21.963 228.717 1.00 -1.00 \ ATOM 233 NZ LYS q 25 197.005 20.544 228.380 1.00 -1.00 \ """, "e5dc3q11_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5dc3q11_csv", state=0, origin=1) cmd.zoom("e5dc3q11_csv", animate=-1)