cmd.read_pdbstr("""\ ATOM 1 N MET q 1 225.881 1.449 236.257 1.00 -1.00 \ ATOM 2 CA MET q 1 225.533 0.823 234.990 1.00 -1.00 \ ATOM 3 C MET q 1 226.302 1.407 233.805 1.00 -1.00 \ ATOM 4 O MET q 1 226.739 2.555 233.848 1.00 -1.00 \ ATOM 5 CB MET q 1 224.039 0.959 234.746 1.00 -1.00 \ ATOM 6 CG MET q 1 223.542 2.386 234.745 1.00 -1.00 \ ATOM 7 SD MET q 1 221.811 2.464 234.271 1.00 -1.00 \ ATOM 8 CE MET q 1 221.741 1.191 233.022 1.00 -1.00 \ ATOM 9 N ARG q 2 226.442 0.610 232.748 1.00 0.39 \ ATOM 10 CA ARG q 2 227.229 0.987 231.574 1.00 0.39 \ ATOM 11 C ARG q 2 226.870 2.368 231.053 1.00 0.39 \ ATOM 12 O ARG q 2 225.698 2.704 230.918 1.00 0.39 \ ATOM 13 CB ARG q 2 227.061 -0.043 230.452 1.00 0.39 \ ATOM 14 CG ARG q 2 227.037 0.562 229.050 1.00 0.39 \ ATOM 15 CD ARG q 2 227.990 -0.126 228.088 1.00 0.39 \ ATOM 16 NE ARG q 2 227.369 -1.196 227.315 1.00 0.39 \ ATOM 17 CZ ARG q 2 227.701 -1.494 226.065 1.00 0.39 \ ATOM 18 NH1 ARG q 2 228.627 -0.793 225.443 1.00 0.39 \ ATOM 19 NH2 ARG q 2 227.100 -2.482 225.429 1.00 0.39 \ ATOM 20 N ALA q 3 227.900 3.153 230.759 1.00 0.39 \ ATOM 21 CA ALA q 3 227.751 4.547 230.374 1.00 0.39 \ ATOM 22 C ALA q 3 226.694 4.759 229.309 1.00 0.39 \ ATOM 23 O ALA q 3 225.997 5.764 229.325 1.00 0.39 \ ATOM 24 CB ALA q 3 229.073 5.086 229.898 1.00 0.39 \ ATOM 25 N LYS q 4 226.563 3.806 228.395 1.00 0.39 \ ATOM 26 CA LYS q 4 225.629 3.956 227.281 1.00 0.39 \ ATOM 27 C LYS q 4 224.178 3.526 227.613 1.00 0.39 \ ATOM 28 O LYS q 4 223.233 3.943 226.941 1.00 0.39 \ ATOM 29 CB LYS q 4 226.153 3.184 226.058 1.00 0.39 \ ATOM 30 CG LYS q 4 225.568 1.794 225.864 1.00 0.39 \ ATOM 31 CD LYS q 4 226.012 1.185 224.551 1.00 0.39 \ ATOM 32 CE LYS q 4 225.547 2.014 223.381 1.00 0.39 \ ATOM 33 NZ LYS q 4 225.826 1.346 222.090 1.00 0.39 \ ATOM 34 N TRP q 5 223.996 2.708 228.645 1.00 0.39 \ ATOM 35 CA TRP q 5 222.650 2.355 229.061 1.00 0.39 \ ATOM 36 C TRP q 5 222.105 3.391 230.036 1.00 0.39 \ ATOM 37 O TRP q 5 220.891 3.605 230.104 1.00 0.39 \ ATOM 38 CB TRP q 5 222.604 0.974 229.700 1.00 0.39 \ ATOM 39 CG TRP q 5 223.195 -0.134 228.901 1.00 0.39 \ ATOM 40 CD1 TRP q 5 223.954 -1.156 229.379 1.00 0.39 \ ATOM 41 CD2 TRP q 5 223.074 -0.353 227.491 1.00 0.39 \ ATOM 42 NE1 TRP q 5 224.318 -1.997 228.362 1.00 0.39 \ ATOM 43 CE2 TRP q 5 223.790 -1.527 227.191 1.00 0.39 \ ATOM 44 CE3 TRP q 5 222.433 0.326 226.454 1.00 0.39 \ ATOM 45 CZ2 TRP q 5 223.884 -2.033 225.901 1.00 0.39 \ ATOM 46 CZ3 TRP q 5 222.526 -0.179 225.178 1.00 0.39 \ ATOM 47 CH2 TRP q 5 223.248 -1.347 224.911 1.00 0.39 \ ATOM 48 N ARG q 6 223.000 4.024 230.798 1.00 0.39 \ ATOM 49 CA ARG q 6 222.615 5.121 231.688 1.00 0.39 \ ATOM 50 C ARG q 6 222.148 6.272 230.829 1.00 0.39 \ ATOM 51 O ARG q 6 221.263 7.039 231.214 1.00 0.39 \ ATOM 52 CB ARG q 6 223.774 5.567 232.582 1.00 0.39 \ ATOM 53 CG ARG q 6 223.400 6.635 233.616 1.00 0.39 \ ATOM 54 CD ARG q 6 224.638 7.194 234.346 1.00 0.39 \ ATOM 55 NE ARG q 6 224.287 8.066 235.475 1.00 0.39 \ ATOM 56 CZ ARG q 6 224.007 9.370 235.379 1.00 0.39 \ ATOM 57 NH1 ARG q 6 224.028 9.982 234.198 1.00 0.39 \ ATOM 58 NH2 ARG q 6 223.697 10.067 236.470 1.00 0.39 \ ATOM 59 N LYS q 7 222.771 6.385 229.660 1.00 0.39 \ ATOM 60 CA LYS q 7 222.342 7.336 228.657 1.00 0.39 \ ATOM 61 C LYS q 7 220.907 6.998 228.302 1.00 0.39 \ ATOM 62 O LYS q 7 219.995 7.795 228.552 1.00 0.39 \ ATOM 63 CB LYS q 7 223.251 7.285 227.430 1.00 0.39 \ ATOM 64 CG LYS q 7 223.015 8.398 226.421 1.00 0.39 \ ATOM 65 CD LYS q 7 224.290 8.716 225.662 1.00 0.39 \ ATOM 66 CE LYS q 7 224.000 9.405 224.340 1.00 0.39 \ ATOM 67 NZ LYS q 7 225.251 9.779 223.609 1.00 0.39 \ ATOM 68 N LYS q 8 220.720 5.795 227.757 1.00 0.39 \ ATOM 69 CA LYS q 8 219.398 5.245 227.432 1.00 0.39 \ ATOM 70 C LYS q 8 218.400 5.495 228.547 1.00 0.39 \ ATOM 71 O LYS q 8 217.246 5.817 228.286 1.00 0.39 \ ATOM 72 CB LYS q 8 219.501 3.742 227.157 1.00 0.39 \ ATOM 73 CG LYS q 8 218.216 3.060 226.739 1.00 0.39 \ ATOM 74 CD LYS q 8 218.482 1.620 226.317 1.00 0.39 \ ATOM 75 CE LYS q 8 218.883 1.505 224.855 1.00 0.39 \ ATOM 76 NZ LYS q 8 217.721 1.238 223.969 1.00 0.39 \ ATOM 77 N ARG q 9 218.869 5.368 229.785 1.00 0.39 \ ATOM 78 CA ARG q 9 218.028 5.602 230.952 1.00 0.39 \ ATOM 79 C ARG q 9 217.451 7.012 230.942 1.00 0.39 \ ATOM 80 O ARG q 9 216.245 7.199 231.129 1.00 0.39 \ ATOM 81 CB ARG q 9 218.808 5.370 232.252 1.00 0.39 \ ATOM 82 CG ARG q 9 217.954 5.451 233.509 1.00 0.39 \ ATOM 83 CD ARG q 9 218.825 5.349 234.739 1.00 0.39 \ ATOM 84 NE ARG q 9 218.447 4.284 235.667 1.00 0.39 \ ATOM 85 CZ ARG q 9 218.486 2.982 235.389 1.00 0.39 \ ATOM 86 NH1 ARG q 9 218.855 2.554 234.191 1.00 0.39 \ ATOM 87 NH2 ARG q 9 218.137 2.098 236.312 1.00 0.39 \ ATOM 88 N THR q 10 218.303 8.006 230.717 1.00 -2.46 \ ATOM 89 CA THR q 10 217.863 9.388 230.859 1.00 -2.46 \ ATOM 90 C THR q 10 217.072 9.798 229.631 1.00 -2.46 \ ATOM 91 O THR q 10 216.209 10.671 229.697 1.00 -2.46 \ ATOM 92 CB THR q 10 219.050 10.346 231.088 1.00 -2.46 \ ATOM 93 OG1 THR q 10 220.102 9.655 231.775 1.00 -2.46 \ ATOM 94 CG2 THR q 10 218.605 11.535 231.928 1.00 -2.46 \ ATOM 95 N ARG q 11 217.359 9.144 228.513 1.00 0.39 \ ATOM 96 CA ARG q 11 216.569 9.354 227.307 1.00 0.39 \ ATOM 97 C ARG q 11 215.136 8.905 227.569 1.00 0.39 \ ATOM 98 O ARG q 11 214.183 9.511 227.071 1.00 0.39 \ ATOM 99 CB ARG q 11 217.170 8.609 226.101 1.00 0.39 \ ATOM 100 CG ARG q 11 218.577 9.074 225.754 1.00 0.39 \ ATOM 101 CD ARG q 11 218.895 9.013 224.267 1.00 0.39 \ ATOM 102 NE ARG q 11 219.940 9.990 223.950 1.00 0.39 \ ATOM 103 CZ ARG q 11 220.688 9.998 222.847 1.00 0.39 \ ATOM 104 NH1 ARG q 11 220.537 9.062 221.911 1.00 0.39 \ ATOM 105 NH2 ARG q 11 221.599 10.952 222.689 1.00 0.39 \ ATOM 106 N ARG q 12 214.997 7.847 228.364 1.00 0.39 \ ATOM 107 CA ARG q 12 213.690 7.371 228.786 1.00 0.39 \ ATOM 108 C ARG q 12 213.067 8.358 229.745 1.00 0.39 \ ATOM 109 O ARG q 12 211.913 8.742 229.588 1.00 0.39 \ ATOM 110 CB ARG q 12 213.807 5.994 229.432 1.00 0.39 \ ATOM 111 CG ARG q 12 214.262 4.954 228.441 1.00 0.39 \ ATOM 112 CD ARG q 12 214.596 3.618 229.059 1.00 0.39 \ ATOM 113 NE ARG q 12 214.971 2.695 227.993 1.00 0.39 \ ATOM 114 CZ ARG q 12 215.135 1.390 228.154 1.00 0.39 \ ATOM 115 NH1 ARG q 12 214.953 0.847 229.349 1.00 0.39 \ ATOM 116 NH2 ARG q 12 215.477 0.629 227.122 1.00 0.39 \ ATOM 117 N LEU q 13 213.858 8.782 230.724 1.00 0.39 \ ATOM 118 CA LEU q 13 213.409 9.702 231.766 1.00 0.39 \ ATOM 119 C LEU q 13 212.887 11.018 231.200 1.00 0.39 \ ATOM 120 O LEU q 13 211.794 11.452 231.548 1.00 0.39 \ ATOM 121 CB LEU q 13 214.555 9.977 232.743 1.00 0.39 \ ATOM 122 CG LEU q 13 214.256 9.991 234.243 1.00 0.39 \ ATOM 123 CD1 LEU q 13 215.564 10.035 235.029 1.00 0.39 \ ATOM 124 CD2 LEU q 13 213.353 11.163 234.616 1.00 0.39 \ ATOM 125 N LYS q 14 213.675 11.640 230.326 1.00 0.39 \ ATOM 126 CA LYS q 14 213.339 12.941 229.741 1.00 0.39 \ ATOM 127 C LYS q 14 212.041 12.902 228.940 1.00 0.39 \ ATOM 128 O LYS q 14 211.184 13.779 229.073 1.00 0.39 \ ATOM 129 CB LYS q 14 214.485 13.432 228.850 1.00 0.39 \ ATOM 130 CG LYS q 14 215.704 13.905 229.629 1.00 0.39 \ ATOM 131 CD LYS q 14 216.849 14.293 228.702 1.00 0.39 \ ATOM 132 CE LYS q 14 216.440 15.384 227.713 1.00 0.39 \ ATOM 133 NZ LYS q 14 217.503 15.668 226.706 1.00 0.39 \ ATOM 134 N ARG q 15 211.901 11.878 228.109 1.00 0.39 \ ATOM 135 CA ARG q 15 210.744 11.769 227.241 1.00 0.39 \ ATOM 136 C ARG q 15 209.494 11.524 228.074 1.00 0.39 \ ATOM 137 O ARG q 15 208.403 11.996 227.731 1.00 0.39 \ ATOM 138 CB ARG q 15 210.945 10.649 226.223 1.00 0.39 \ ATOM 139 CG ARG q 15 209.958 10.662 225.066 1.00 0.39 \ ATOM 140 CD ARG q 15 209.979 9.320 224.378 1.00 0.39 \ ATOM 141 NE ARG q 15 211.303 8.724 224.493 1.00 0.39 \ ATOM 142 CZ ARG q 15 212.220 8.760 223.536 1.00 0.39 \ ATOM 143 NH1 ARG q 15 211.945 9.352 222.379 1.00 0.39 \ ATOM 144 NH2 ARG q 15 213.411 8.206 223.729 1.00 0.39 \ ATOM 145 N LYS q 16 209.662 10.786 229.171 1.00 0.39 \ ATOM 146 CA LYS q 16 208.563 10.531 230.090 1.00 0.39 \ ATOM 147 C LYS q 16 208.186 11.828 230.754 1.00 0.39 \ ATOM 148 O LYS q 16 207.017 12.113 230.959 1.00 0.39 \ ATOM 149 CB LYS q 16 208.931 9.494 231.144 1.00 0.39 \ ATOM 150 CG LYS q 16 207.775 9.171 232.083 1.00 0.39 \ ATOM 151 CD LYS q 16 208.170 8.251 233.257 1.00 0.39 \ ATOM 152 CE LYS q 16 208.908 9.001 234.371 1.00 0.39 \ ATOM 153 NZ LYS q 16 209.334 8.085 235.457 1.00 0.39 \ ATOM 154 N ARG q 17 209.193 12.628 231.067 1.00 0.39 \ ATOM 155 CA ARG q 17 208.960 13.896 231.733 1.00 0.39 \ ATOM 156 C ARG q 17 208.495 14.971 230.773 1.00 0.39 \ ATOM 157 O ARG q 17 207.767 15.876 231.172 1.00 0.39 \ ATOM 158 CB ARG q 17 210.219 14.355 232.461 1.00 0.39 \ ATOM 159 CG ARG q 17 210.028 14.417 233.966 1.00 0.39 \ ATOM 160 CD ARG q 17 211.334 14.268 234.721 1.00 0.39 \ ATOM 161 NE ARG q 17 212.481 14.657 233.919 1.00 0.39 \ ATOM 162 CZ ARG q 17 213.706 14.786 234.407 1.00 0.39 \ ATOM 163 NH1 ARG q 17 213.927 14.565 235.699 1.00 0.39 \ ATOM 164 NH2 ARG q 17 214.703 15.140 233.607 1.00 0.39 \ ATOM 165 N ARG q 18 208.911 14.879 229.511 1.00 0.39 \ ATOM 166 CA ARG q 18 208.413 15.808 228.505 1.00 0.39 \ ATOM 167 C ARG q 18 206.900 15.623 228.372 1.00 0.39 \ ATOM 168 O ARG q 18 206.159 16.599 228.246 1.00 0.39 \ ATOM 169 CB ARG q 18 209.108 15.609 227.153 1.00 0.39 \ ATOM 170 CG ARG q 18 209.134 16.887 226.307 1.00 0.39 \ ATOM 171 CD ARG q 18 208.935 16.652 224.797 1.00 0.39 \ ATOM 172 NE ARG q 18 207.893 17.536 224.252 1.00 0.39 \ ATOM 173 CZ ARG q 18 207.460 17.532 222.987 1.00 0.39 \ ATOM 174 NH1 ARG q 18 206.497 18.373 222.617 1.00 0.39 \ ATOM 175 NH2 ARG q 18 207.982 16.698 222.087 1.00 0.39 \ ATOM 176 N LYS q 19 206.449 14.369 228.436 1.00 0.39 \ ATOM 177 CA LYS q 19 205.025 14.040 228.318 1.00 0.39 \ ATOM 178 C LYS q 19 204.250 14.266 229.626 1.00 0.39 \ ATOM 179 O LYS q 19 203.118 14.750 229.600 1.00 0.39 \ ATOM 180 CB LYS q 19 204.855 12.589 227.844 1.00 0.39 \ ATOM 181 CG LYS q 19 205.439 12.333 226.452 1.00 0.39 \ ATOM 182 CD LYS q 19 205.356 10.873 226.015 1.00 0.39 \ ATOM 183 CE LYS q 19 203.917 10.420 225.792 1.00 0.39 \ ATOM 184 NZ LYS q 19 203.838 9.031 225.245 1.00 0.39 \ ATOM 185 N VAL q 20 204.861 13.919 230.760 1.00 -2.46 \ ATOM 186 CA VAL q 20 204.275 14.215 232.072 1.00 -2.46 \ ATOM 187 C VAL q 20 203.964 15.705 232.227 1.00 -2.46 \ ATOM 188 O VAL q 20 202.854 16.069 232.601 1.00 -2.46 \ ATOM 189 CB VAL q 20 205.197 13.776 233.239 1.00 -2.46 \ ATOM 190 CG1 VAL q 20 204.753 14.431 234.546 1.00 -2.46 \ ATOM 191 CG2 VAL q 20 205.209 12.253 233.378 1.00 -2.46 \ ATOM 192 N ARG q 21 204.947 16.557 231.943 1.00 0.39 \ ATOM 193 CA ARG q 21 204.733 18.004 231.906 1.00 0.39 \ ATOM 194 C ARG q 21 203.530 18.347 231.037 1.00 0.39 \ ATOM 195 O ARG q 21 202.636 19.082 231.469 1.00 0.39 \ ATOM 196 CB ARG q 21 205.982 18.732 231.381 1.00 0.39 \ ATOM 197 CG ARG q 21 205.690 20.052 230.680 1.00 0.39 \ ATOM 198 CD ARG q 21 206.360 21.241 231.361 1.00 0.39 \ ATOM 199 NE ARG q 21 207.372 21.883 230.512 1.00 0.39 \ ATOM 200 CZ ARG q 21 207.916 23.075 230.752 1.00 0.39 \ ATOM 201 NH1 ARG q 21 207.552 23.773 231.815 1.00 0.39 \ ATOM 202 NH2 ARG q 21 208.819 23.576 229.926 1.00 0.39 \ ATOM 203 N ALA q 22 203.507 17.774 229.831 1.00 -2.46 \ ATOM 204 CA ALA q 22 202.527 18.110 228.798 1.00 -2.46 \ ATOM 205 C ALA q 22 201.073 17.976 229.251 1.00 -2.46 \ ATOM 206 O ALA q 22 200.231 18.787 228.871 1.00 -2.46 \ ATOM 207 CB ALA q 22 202.761 17.249 227.580 1.00 -2.46 \ ATOM 208 N ARG q 23 200.803 16.955 230.069 1.00 0.39 \ ATOM 209 CA ARG q 23 199.482 16.659 230.643 1.00 0.39 \ ATOM 210 C ARG q 23 198.733 17.937 231.075 1.00 0.39 \ ATOM 211 O ARG q 23 197.507 17.972 231.117 1.00 0.39 \ ATOM 212 CB ARG q 23 199.654 15.671 231.826 1.00 0.39 \ ATOM 213 CG ARG q 23 198.369 15.210 232.531 1.00 0.39 \ ATOM 214 CD ARG q 23 198.432 13.740 233.008 1.00 0.39 \ ATOM 215 NE ARG q 23 199.562 13.415 233.901 1.00 0.39 \ ATOM 216 CZ ARG q 23 199.457 12.780 235.081 1.00 0.39 \ ATOM 217 NH1 ARG q 23 198.271 12.391 235.547 1.00 0.39 \ ATOM 218 NH2 ARG q 23 200.548 12.531 235.806 1.00 0.39 \ ATOM 219 N SER q 24 199.482 18.997 231.358 1.00 -1.00 \ ATOM 220 CA SER q 24 198.911 20.300 231.670 1.00 -1.00 \ ATOM 221 C SER q 24 198.564 21.038 230.396 1.00 -1.00 \ ATOM 222 O SER q 24 198.567 22.272 230.377 1.00 -1.00 \ ATOM 223 CB SER q 24 199.893 21.135 232.495 1.00 -1.00 \ ATOM 224 OG SER q 24 201.132 21.286 231.812 1.00 -1.00 \ ATOM 225 N LYS q 25 198.282 20.258 229.347 1.00 -1.00 \ ATOM 226 CA LYS q 25 197.946 20.710 227.975 1.00 -1.00 \ ATOM 227 C LYS q 25 198.702 21.994 227.565 1.00 -1.00 \ ATOM 228 O LYS q 25 199.939 22.094 227.713 1.00 -1.00 \ ATOM 229 CB LYS q 25 196.415 20.899 227.812 1.00 -1.00 \ ATOM 230 CG LYS q 25 195.501 19.994 228.713 1.00 -1.00 \ ATOM 231 CD LYS q 25 195.393 18.505 228.332 1.00 -1.00 \ ATOM 232 CE LYS q 25 194.576 17.783 229.368 1.00 -1.00 \ ATOM 233 NZ LYS q 25 194.520 16.374 229.083 1.00 -1.00 \ """, "e5dgfq11_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5dgfq11_csv", state=0, origin=1) cmd.zoom("e5dgfq11_csv", animate=-1)