cmd.read_pdbstr("""\ ATOM 1 N VAL Y 18 115.060 167.831 155.741 1.00 -1.50 \ ATOM 2 CA VAL Y 18 114.671 167.633 154.344 1.00 -1.50 \ ATOM 3 C VAL Y 18 114.676 168.934 153.520 1.00 -1.50 \ ATOM 4 O VAL Y 18 115.108 168.941 152.360 1.00 -1.50 \ ATOM 5 CB VAL Y 18 113.275 166.983 154.239 1.00 -1.50 \ ATOM 6 CG1 VAL Y 18 112.977 166.562 152.800 1.00 -1.50 \ ATOM 7 CG2 VAL Y 18 113.175 165.801 155.188 1.00 -1.50 \ ATOM 8 N ILE Y 19 114.187 170.020 154.121 1.00 0.64 \ ATOM 9 CA ILE Y 19 114.181 171.342 153.481 1.00 0.64 \ ATOM 10 C ILE Y 19 115.606 171.836 153.205 1.00 0.64 \ ATOM 11 O ILE Y 19 115.918 172.371 152.121 1.00 0.64 \ ATOM 12 CB ILE Y 19 113.430 172.388 154.375 1.00 0.64 \ ATOM 13 CG1 ILE Y 19 112.010 171.914 154.704 1.00 0.64 \ ATOM 14 CG2 ILE Y 19 113.398 173.768 153.722 1.00 0.64 \ ATOM 15 CD1 ILE Y 19 111.460 172.451 156.012 1.00 0.64 \ ATOM 16 N ALA Y 20 116.482 171.557 154.166 1.00 0.64 \ ATOM 17 CA ALA Y 20 117.892 171.926 154.090 1.00 0.64 \ ATOM 18 C ALA Y 20 118.609 171.190 152.967 1.00 0.64 \ ATOM 19 O ALA Y 20 119.458 171.780 152.291 1.00 0.64 \ ATOM 20 CB ALA Y 20 118.590 171.661 155.427 1.00 0.64 \ ATOM 21 N GLN Y 21 118.243 169.924 152.750 1.00 0.64 \ ATOM 22 CA GLN Y 21 118.869 169.083 151.722 1.00 0.64 \ ATOM 23 C GLN Y 21 118.490 169.523 150.308 1.00 0.64 \ ATOM 24 O GLN Y 21 119.336 169.552 149.391 1.00 0.64 \ ATOM 25 CB GLN Y 21 118.451 167.618 151.944 1.00 0.64 \ ATOM 26 CG GLN Y 21 119.247 166.875 153.015 1.00 0.64 \ ATOM 27 CD GLN Y 21 118.460 165.770 153.711 1.00 0.64 \ ATOM 28 OE1 GLN Y 21 117.254 165.625 153.505 1.00 0.64 \ ATOM 29 NE2 GLN Y 21 119.143 164.992 154.552 1.00 0.64 \ ATOM 30 N LEU Y 22 117.245 169.946 150.151 1.00 0.64 \ ATOM 31 CA LEU Y 22 116.801 170.393 148.856 1.00 0.64 \ ATOM 32 C LEU Y 22 117.365 171.781 148.615 1.00 0.64 \ ATOM 33 O LEU Y 22 117.592 172.163 147.465 1.00 0.64 \ ATOM 34 CB LEU Y 22 115.284 170.383 148.762 1.00 0.64 \ ATOM 35 CG LEU Y 22 114.689 168.978 148.722 1.00 0.64 \ ATOM 36 CD1 LEU Y 22 113.343 168.935 149.417 1.00 0.64 \ ATOM 37 CD2 LEU Y 22 114.569 168.507 147.288 1.00 0.64 \ ATOM 38 N THR Y 23 117.655 172.517 149.692 1.00 0.64 \ ATOM 39 CA THR Y 23 118.309 173.818 149.517 1.00 0.64 \ ATOM 40 C THR Y 23 119.784 173.660 149.097 1.00 0.64 \ ATOM 41 O THR Y 23 120.271 174.365 148.187 1.00 0.64 \ ATOM 42 CB THR Y 23 118.256 174.665 150.826 1.00 0.64 \ ATOM 43 OG1 THR Y 23 116.948 174.593 151.405 1.00 0.64 \ ATOM 44 CG2 THR Y 23 118.614 176.127 150.564 1.00 0.64 \ ATOM 45 N MET Y 24 120.474 172.694 149.709 1.00 0.64 \ ATOM 46 CA MET Y 24 121.880 172.462 149.385 1.00 0.64 \ ATOM 47 C MET Y 24 121.994 172.048 147.935 1.00 0.64 \ ATOM 48 O MET Y 24 122.719 172.677 147.170 1.00 0.64 \ ATOM 49 CB MET Y 24 122.515 171.413 150.296 1.00 0.64 \ ATOM 50 CG MET Y 24 122.681 171.874 151.737 1.00 0.64 \ ATOM 51 SD MET Y 24 123.227 173.592 151.901 1.00 0.64 \ ATOM 52 CE MET Y 24 121.695 174.447 152.310 1.00 0.64 \ ATOM 53 N ILE Y 25 121.257 171.001 147.561 1.00 -1.50 \ ATOM 54 CA ILE Y 25 121.275 170.531 146.167 1.00 -1.50 \ ATOM 55 C ILE Y 25 120.688 171.587 145.208 1.00 -1.50 \ ATOM 56 O ILE Y 25 120.917 171.537 144.004 1.00 -1.50 \ ATOM 57 CB ILE Y 25 120.554 169.155 145.987 1.00 -1.50 \ ATOM 58 CG1 ILE Y 25 120.807 168.590 144.574 1.00 -1.50 \ ATOM 59 CG2 ILE Y 25 119.055 169.257 146.282 1.00 -1.50 \ ATOM 60 CD1 ILE Y 25 122.240 168.123 144.301 1.00 -1.50 \ ATOM 61 N ALA Y 26 119.963 172.569 145.730 1.00 0.64 \ ATOM 62 CA ALA Y 26 119.512 173.633 144.847 1.00 0.64 \ ATOM 63 C ALA Y 26 120.693 174.521 144.489 1.00 0.64 \ ATOM 64 O ALA Y 26 120.940 174.752 143.300 1.00 0.64 \ ATOM 65 CB ALA Y 26 118.397 174.452 145.486 1.00 0.64 \ ATOM 66 N MET Y 27 121.473 174.949 145.482 1.00 -1.50 \ ATOM 67 CA MET Y 27 122.673 175.740 145.170 1.00 -1.50 \ ATOM 68 C MET Y 27 123.754 174.971 144.395 1.00 -1.50 \ ATOM 69 O MET Y 27 124.224 175.444 143.339 1.00 -1.50 \ ATOM 70 CB MET Y 27 123.323 176.310 146.446 1.00 -1.50 \ ATOM 71 CG MET Y 27 122.925 177.735 146.834 1.00 -1.50 \ ATOM 72 SD MET Y 27 121.844 177.864 148.271 1.00 -1.50 \ ATOM 73 CE MET Y 27 122.898 177.224 149.571 1.00 -1.50 \ ATOM 74 N ILE Y 28 124.057 173.750 144.833 1.00 0.64 \ ATOM 75 CA ILE Y 28 125.034 172.919 144.135 1.00 0.64 \ ATOM 76 C ILE Y 28 124.558 172.626 142.733 1.00 0.64 \ ATOM 77 O ILE Y 28 125.325 172.725 141.775 1.00 0.64 \ ATOM 78 CB ILE Y 28 125.264 171.569 144.872 1.00 0.64 \ ATOM 79 CG1 ILE Y 28 126.017 171.780 146.189 1.00 0.64 \ ATOM 80 CG2 ILE Y 28 126.030 170.610 144.003 1.00 0.64 \ ATOM 81 CD1 ILE Y 28 125.858 170.640 147.182 1.00 0.64 \ ATOM 82 N GLY Y 29 123.281 172.306 142.608 1.00 -1.50 \ ATOM 83 CA GLY Y 29 122.703 171.984 141.322 1.00 -1.50 \ ATOM 84 C GLY Y 29 122.700 173.130 140.331 1.00 -1.50 \ ATOM 85 O GLY Y 29 122.986 172.942 139.154 1.00 -1.50 \ ATOM 86 N ILE Y 30 122.423 174.334 140.811 1.00 0.64 \ ATOM 87 CA ILE Y 30 122.366 175.479 139.912 1.00 0.64 \ ATOM 88 C ILE Y 30 123.769 175.979 139.507 1.00 0.64 \ ATOM 89 O ILE Y 30 123.925 176.583 138.437 1.00 0.64 \ ATOM 90 CB ILE Y 30 121.522 176.642 140.518 1.00 0.64 \ ATOM 91 CG1 ILE Y 30 120.828 177.430 139.405 1.00 0.64 \ ATOM 92 CG2 ILE Y 30 122.350 177.535 141.455 1.00 0.64 \ ATOM 93 CD1 ILE Y 30 119.646 176.703 138.816 1.00 0.64 \ ATOM 94 N ALA Y 31 124.776 175.714 140.348 1.00 0.64 \ ATOM 95 CA ALA Y 31 126.149 176.231 140.125 1.00 0.64 \ ATOM 96 C ALA Y 31 126.762 176.078 138.715 1.00 0.64 \ ATOM 97 O ALA Y 31 127.238 177.059 138.135 1.00 0.64 \ ATOM 98 CB ALA Y 31 127.097 175.588 141.142 1.00 0.64 \ ATOM 99 N GLY Y 32 126.766 174.869 138.175 1.00 0.64 \ ATOM 100 CA GLY Y 32 127.290 174.631 136.842 1.00 0.64 \ ATOM 101 C GLY Y 32 126.652 175.474 135.754 1.00 0.64 \ ATOM 102 O GLY Y 32 127.344 176.257 135.078 1.00 0.64 \ ATOM 103 N PRO Y 33 125.320 175.366 135.611 1.00 0.64 \ ATOM 104 CA PRO Y 33 124.596 176.171 134.627 1.00 0.64 \ ATOM 105 C PRO Y 33 124.793 177.647 134.875 1.00 0.64 \ ATOM 106 O PRO Y 33 124.708 178.416 133.926 1.00 0.64 \ ATOM 107 CB PRO Y 33 123.133 175.780 134.853 1.00 0.64 \ ATOM 108 CG PRO Y 33 123.199 174.424 135.370 1.00 0.64 \ ATOM 109 CD PRO Y 33 124.432 174.377 136.246 1.00 0.64 \ ATOM 110 N MET Y 34 125.015 178.046 136.121 1.00 -1.50 \ ATOM 111 CA MET Y 34 125.307 179.447 136.376 1.00 -1.50 \ ATOM 112 C MET Y 34 126.656 179.831 135.749 1.00 -1.50 \ ATOM 113 O MET Y 34 126.767 180.879 135.112 1.00 -1.50 \ ATOM 114 CB MET Y 34 125.293 179.761 137.875 1.00 -1.50 \ ATOM 115 CG MET Y 34 125.283 181.265 138.155 1.00 -1.50 \ ATOM 116 SD MET Y 34 123.920 182.174 137.362 1.00 -1.50 \ ATOM 117 CE MET Y 34 122.506 181.302 138.033 1.00 -1.50 \ ATOM 118 N ILE Y 35 127.667 178.978 135.911 1.00 -1.50 \ ATOM 119 CA ILE Y 35 128.976 179.202 135.288 1.00 -1.50 \ ATOM 120 C ILE Y 35 128.828 179.399 133.782 1.00 -1.50 \ ATOM 121 O ILE Y 35 129.331 180.381 133.191 1.00 -1.50 \ ATOM 122 CB ILE Y 35 129.931 178.019 135.568 1.00 -1.50 \ ATOM 123 CG1 ILE Y 35 130.239 177.953 137.069 1.00 -1.50 \ ATOM 124 CG2 ILE Y 35 131.201 178.127 134.721 1.00 -1.50 \ ATOM 125 CD1 ILE Y 35 130.927 176.690 137.517 1.00 -1.50 \ ATOM 126 N ILE Y 36 128.073 178.487 133.181 1.00 0.64 \ ATOM 127 CA ILE Y 36 127.848 178.529 131.744 1.00 0.64 \ ATOM 128 C ILE Y 36 127.072 179.780 131.320 1.00 0.64 \ ATOM 129 O ILE Y 36 127.452 180.468 130.370 1.00 0.64 \ ATOM 130 CB ILE Y 36 127.106 177.277 131.283 1.00 0.64 \ ATOM 131 CG1 ILE Y 36 127.895 176.029 131.696 1.00 0.64 \ ATOM 132 CG2 ILE Y 36 126.906 177.316 129.799 1.00 0.64 \ ATOM 133 CD1 ILE Y 36 129.375 176.075 131.336 1.00 0.64 \ ATOM 134 N PHE Y 37 126.015 180.099 132.053 1.00 0.64 \ ATOM 135 CA PHE Y 37 125.188 181.256 131.748 1.00 0.64 \ ATOM 136 C PHE Y 37 125.973 182.561 131.807 1.00 0.64 \ ATOM 137 O PHE Y 37 125.922 183.352 130.861 1.00 0.64 \ ATOM 138 CB PHE Y 37 124.012 181.300 132.730 1.00 0.64 \ ATOM 139 CG PHE Y 37 123.060 182.443 132.506 1.00 0.64 \ ATOM 140 CD1 PHE Y 37 122.072 182.372 131.538 1.00 0.64 \ ATOM 141 CD2 PHE Y 37 123.126 183.573 133.316 1.00 0.64 \ ATOM 142 CE1 PHE Y 37 121.192 183.428 131.348 1.00 0.64 \ ATOM 143 CE2 PHE Y 37 122.250 184.629 133.136 1.00 0.64 \ ATOM 144 CZ PHE Y 37 121.280 184.556 132.151 1.00 0.64 \ ATOM 145 N LEU Y 38 126.688 182.775 132.914 1.00 0.64 \ ATOM 146 CA LEU Y 38 127.535 183.965 133.100 1.00 0.64 \ ATOM 147 C LEU Y 38 128.605 184.104 132.003 1.00 0.64 \ ATOM 148 O LEU Y 38 128.838 185.208 131.491 1.00 0.64 \ ATOM 149 CB LEU Y 38 128.202 183.992 134.495 1.00 0.64 \ ATOM 150 CG LEU Y 38 127.384 184.387 135.741 1.00 0.64 \ ATOM 151 CD1 LEU Y 38 128.144 184.026 137.030 1.00 0.64 \ ATOM 152 CD2 LEU Y 38 126.990 185.873 135.736 1.00 0.64 \ ATOM 153 N LEU Y 39 129.259 182.996 131.648 1.00 0.64 \ ATOM 154 CA LEU Y 39 130.263 183.045 130.579 1.00 0.64 \ ATOM 155 C LEU Y 39 129.643 183.375 129.214 1.00 0.64 \ ATOM 156 O LEU Y 39 130.250 184.077 128.399 1.00 0.64 \ ATOM 157 CB LEU Y 39 131.021 181.729 130.532 1.00 0.64 \ ATOM 158 CG LEU Y 39 132.014 181.709 131.692 1.00 0.64 \ ATOM 159 CD1 LEU Y 39 132.645 180.346 131.837 1.00 0.64 \ ATOM 160 CD2 LEU Y 39 133.066 182.788 131.520 1.00 0.64 \ ATOM 161 N ALA Y 40 128.455 182.834 128.958 1.00 0.64 \ ATOM 162 CA ALA Y 40 127.742 183.101 127.710 1.00 0.64 \ ATOM 163 C ALA Y 40 127.282 184.564 127.619 1.00 0.64 \ ATOM 164 O ALA Y 40 127.346 185.183 126.552 1.00 0.64 \ ATOM 165 CB ALA Y 40 126.548 182.171 127.583 1.00 0.64 \ ATOM 166 N VAL Y 41 126.838 185.111 128.752 1.00 -1.50 \ ATOM 167 CA VAL Y 41 126.416 186.510 128.839 1.00 -1.50 \ ATOM 168 C VAL Y 41 127.592 187.450 128.587 1.00 -1.50 \ ATOM 169 O VAL Y 41 127.450 188.476 127.917 1.00 -1.50 \ ATOM 170 CB VAL Y 41 125.790 186.816 130.219 1.00 -1.50 \ ATOM 171 CG1 VAL Y 41 125.688 188.315 130.455 1.00 -1.50 \ ATOM 172 CG2 VAL Y 41 124.434 186.151 130.339 1.00 -1.50 \ ATOM 173 N ARG Y 42 128.762 187.084 129.098 1.00 0.64 \ ATOM 174 CA ARG Y 42 129.933 187.941 128.991 1.00 0.64 \ ATOM 175 C ARG Y 42 130.753 187.592 127.764 1.00 0.64 \ ATOM 176 O ARG Y 42 131.895 188.037 127.660 1.00 0.64 \ ATOM 177 CB ARG Y 42 130.816 187.877 130.232 1.00 0.64 \ ATOM 178 CG ARG Y 42 130.194 188.550 131.427 1.00 0.64 \ ATOM 179 CD ARG Y 42 130.484 187.782 132.689 1.00 0.64 \ ATOM 180 NE ARG Y 42 131.915 187.778 132.995 1.00 0.64 \ ATOM 181 CZ ARG Y 42 132.443 188.278 134.112 1.00 0.64 \ ATOM 182 NH1 ARG Y 42 131.651 188.822 135.032 1.00 0.64 \ ATOM 183 NH2 ARG Y 42 133.759 188.236 134.309 1.00 0.64 \ ATOM 184 N ARG Y 43 130.184 186.790 126.856 1.00 -1.50 \ ATOM 185 CA ARG Y 43 130.893 186.315 125.652 1.00 -1.50 \ ATOM 186 C ARG Y 43 132.226 185.649 126.003 1.00 -1.50 \ ATOM 187 O ARG Y 43 133.248 185.868 125.333 1.00 -1.50 \ ATOM 188 CB ARG Y 43 131.149 187.461 124.654 1.00 -1.50 \ ATOM 189 CG ARG Y 43 129.926 188.010 123.937 1.00 -1.50 \ ATOM 190 CD ARG Y 43 130.315 189.141 122.982 1.00 -1.50 \ ATOM 191 NE ARG Y 43 129.147 189.825 122.430 1.00 -1.50 \ ATOM 192 CZ ARG Y 43 129.199 190.941 121.709 1.00 -1.50 \ ATOM 193 NH1 ARG Y 43 130.371 191.508 121.446 1.00 -1.50 \ ATOM 194 NH2 ARG Y 43 128.079 191.489 121.248 1.00 -1.50 \ ATOM 195 N GLY Y 44 132.197 184.811 127.035 1.00 0.64 \ ATOM 196 CA GLY Y 44 133.395 184.149 127.508 1.00 0.64 \ ATOM 197 C GLY Y 44 133.910 183.075 126.573 1.00 0.64 \ ATOM 198 O GLY Y 44 133.305 182.768 125.540 1.00 0.64 \ ATOM 199 N ASN Y 45 135.059 182.523 126.943 1.00 -1.50 \ ATOM 200 CA ASN Y 45 135.758 181.535 126.140 1.00 -1.50 \ ATOM 201 C ASN Y 45 135.197 180.117 126.361 1.00 -1.50 \ ATOM 202 O ASN Y 45 135.892 179.242 126.893 1.00 -1.50 \ ATOM 203 CB ASN Y 45 137.252 181.562 126.477 1.00 -1.50 \ ATOM 204 CG ASN Y 45 138.091 180.756 125.499 1.00 -1.50 \ ATOM 205 OD1 ASN Y 45 137.706 180.564 124.338 1.00 -1.50 \ ATOM 206 ND2 ASN Y 45 139.229 180.244 125.977 1.00 -1.50 \ ATOM 207 N LEU Y 46 133.930 179.920 125.975 1.00 0.64 \ ATOM 208 CA LEU Y 46 133.229 178.620 126.025 1.00 0.64 \ ATOM 209 C LEU Y 46 133.670 177.634 124.942 1.00 0.64 \ ATOM 210 O LEU Y 46 133.515 176.419 125.078 1.00 0.64 \ ATOM 211 CB LEU Y 46 131.711 178.839 125.912 1.00 0.64 \ ATOM 212 CG LEU Y 46 130.953 179.518 127.056 1.00 0.64 \ ATOM 213 CD1 LEU Y 46 129.508 179.766 126.667 1.00 0.64 \ ATOM 214 CD2 LEU Y 46 131.017 178.665 128.315 1.00 0.64 \ ATOM 215 OXT LEU Y 46 134.179 178.023 123.894 1.00 0.64 \ """, "e5e79Y1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5e79Y1_csv", state=0, origin=1) cmd.zoom("e5e79Y1_csv", animate=-1)