cmd.read_pdbstr("""\ ATOM 1 N PHE L 1 -17.503 -18.907 33.101 1.00 -1.00 \ ATOM 2 CA PHE L 1 -18.374 -17.744 32.981 1.00 -1.00 \ ATOM 3 C PHE L 1 -17.937 -16.606 33.889 1.00 -1.00 \ ATOM 4 O PHE L 1 -18.616 -15.580 33.997 1.00 -1.00 \ ATOM 5 CB PHE L 1 -19.818 -18.140 33.254 1.00 -1.00 \ ATOM 6 CG PHE L 1 -20.436 -18.885 32.115 1.00 -1.00 \ ATOM 7 CD1 PHE L 1 -21.134 -18.209 31.125 1.00 -1.00 \ ATOM 8 CD2 PHE L 1 -20.268 -20.258 31.995 1.00 -1.00 \ ATOM 9 CE1 PHE L 1 -21.690 -18.886 30.059 1.00 -1.00 \ ATOM 10 CE2 PHE L 1 -20.821 -20.947 30.927 1.00 -1.00 \ ATOM 11 CZ PHE L 1 -21.533 -20.257 29.955 1.00 -1.00 \ ATOM 12 N VAL L 2 -16.770 -16.766 34.501 1.00 -1.00 \ ATOM 13 CA VAL L 2 -16.193 -15.681 35.277 1.00 -1.00 \ ATOM 14 C VAL L 2 -15.842 -14.453 34.412 1.00 -1.00 \ ATOM 15 O VAL L 2 -16.072 -13.319 34.826 1.00 -1.00 \ ATOM 16 CB VAL L 2 -14.951 -16.151 36.033 1.00 -1.00 \ ATOM 17 CG1 VAL L 2 -14.395 -15.013 36.868 1.00 -1.00 \ ATOM 18 CG2 VAL L 2 -15.324 -17.316 36.936 1.00 -1.00 \ ATOM 19 N ASN L 3 -15.305 -14.668 33.214 1.00 -0.47 \ ATOM 20 CA ASN L 3 -15.028 -13.534 32.339 1.00 -0.47 \ ATOM 21 C ASN L 3 -16.291 -12.739 31.998 1.00 -0.47 \ ATOM 22 O ASN L 3 -16.287 -11.520 32.093 1.00 -0.47 \ ATOM 23 CB ASN L 3 -14.344 -13.972 31.040 1.00 -0.47 \ ATOM 24 CG ASN L 3 -12.917 -14.411 31.256 1.00 -0.47 \ ATOM 25 OD1 ASN L 3 -12.331 -14.142 32.301 1.00 -0.47 \ ATOM 26 ND2 ASN L 3 -12.333 -15.055 30.252 1.00 -0.47 \ ATOM 27 N GLN L 4 -17.377 -13.430 31.664 1.00 0.23 \ ATOM 28 CA GLN L 4 -18.633 -12.748 31.359 1.00 0.23 \ ATOM 29 C GLN L 4 -19.152 -12.030 32.597 1.00 0.23 \ ATOM 30 O GLN L 4 -19.696 -10.944 32.487 1.00 0.23 \ ATOM 31 CB GLN L 4 -19.683 -13.739 30.824 1.00 0.23 \ ATOM 32 CG GLN L 4 -19.235 -14.406 29.515 1.00 0.23 \ ATOM 33 CD GLN L 4 -20.326 -15.179 28.798 1.00 0.23 \ ATOM 34 OE1 GLN L 4 -21.516 -15.063 29.117 1.00 0.23 \ ATOM 35 NE2 GLN L 4 -19.925 -15.953 27.796 1.00 0.23 \ ATOM 36 N HIS L 5 -18.969 -12.624 33.773 1.00 -0.04 \ ATOM 37 CA HIS L 5 -19.388 -11.979 35.020 1.00 -0.04 \ ATOM 38 C HIS L 5 -18.546 -10.730 35.322 1.00 -0.04 \ ATOM 39 O HIS L 5 -19.092 -9.720 35.730 1.00 -0.04 \ ATOM 40 CB HIS L 5 -19.291 -12.933 36.206 1.00 -0.04 \ ATOM 41 CG HIS L 5 -19.746 -12.326 37.500 1.00 -0.04 \ ATOM 42 ND1 HIS L 5 -21.075 -12.230 37.857 1.00 -0.04 \ ATOM 43 CD2 HIS L 5 -19.049 -11.714 38.487 1.00 -0.04 \ ATOM 44 CE1 HIS L 5 -21.169 -11.637 39.034 1.00 -0.04 \ ATOM 45 NE2 HIS L 5 -19.954 -11.310 39.436 1.00 -0.04 \ ATOM 46 N LEU L 6 -17.222 -10.809 35.154 1.00 1.15 \ ATOM 47 CA LEU L 6 -16.363 -9.642 35.378 1.00 1.15 \ ATOM 48 C LEU L 6 -16.678 -8.537 34.346 1.00 1.15 \ ATOM 49 O LEU L 6 -16.762 -7.373 34.688 1.00 1.15 \ ATOM 50 CB LEU L 6 -14.883 -10.033 35.319 1.00 1.15 \ ATOM 51 CG LEU L 6 -14.388 -11.074 36.327 1.00 1.15 \ ATOM 52 CD1 LEU L 6 -12.880 -11.340 36.201 1.00 1.15 \ ATOM 53 CD2 LEU L 6 -14.703 -10.621 37.729 1.00 1.15 \ ATOM 54 N CYS L 7 -16.872 -8.925 33.091 1.00 1.70 \ ATOM 55 CA CYS L 7 -17.254 -7.998 32.035 1.00 1.70 \ ATOM 56 C CYS L 7 -18.577 -7.300 32.347 1.00 1.70 \ ATOM 57 O CYS L 7 -18.683 -6.070 32.228 1.00 1.70 \ ATOM 58 CB CYS L 7 -17.359 -8.742 30.701 1.00 1.70 \ ATOM 59 SG CYS L 7 -17.993 -7.791 29.279 1.00 1.70 \ ATOM 60 N GLY L 8 -19.565 -8.075 32.795 1.00 0.71 \ ATOM 61 CA GLY L 8 -20.871 -7.523 33.088 1.00 0.71 \ ATOM 62 C GLY L 8 -20.778 -6.445 34.158 1.00 0.71 \ ATOM 63 O GLY L 8 -21.486 -5.434 34.103 1.00 0.71 \ ATOM 64 N SER L 9 -19.888 -6.647 35.125 1.00 -0.48 \ ATOM 65 CA SER L 9 -19.708 -5.666 36.187 1.00 -0.48 \ ATOM 66 C SER L 9 -19.207 -4.333 35.646 1.00 -0.48 \ ATOM 67 O SER L 9 -19.665 -3.278 36.081 1.00 -0.48 \ ATOM 68 CB SER L 9 -18.763 -6.193 37.248 1.00 -0.48 \ ATOM 69 OG SER L 9 -18.494 -5.195 38.197 1.00 -0.48 \ ATOM 70 N HIS L 10 -18.264 -4.384 34.704 1.00 -0.23 \ ATOM 71 CA HIS L 10 -17.742 -3.175 34.078 1.00 -0.23 \ ATOM 72 C HIS L 10 -18.731 -2.583 33.073 1.00 -0.23 \ ATOM 73 O HIS L 10 -18.762 -1.360 32.853 1.00 -0.23 \ ATOM 74 CB HIS L 10 -16.393 -3.469 33.425 1.00 -0.23 \ ATOM 75 CG HIS L 10 -15.318 -3.776 34.420 1.00 -0.23 \ ATOM 76 ND1 HIS L 10 -14.484 -2.813 34.948 1.00 -0.23 \ ATOM 77 CD2 HIS L 10 -14.992 -4.933 35.042 1.00 -0.23 \ ATOM 78 CE1 HIS L 10 -13.661 -3.369 35.818 1.00 -0.23 \ ATOM 79 NE2 HIS L 10 -13.953 -4.655 35.898 1.00 -0.23 \ ATOM 80 N LEU L 11 -19.542 -3.442 32.465 1.00 1.70 \ ATOM 81 CA LEU L 11 -20.562 -2.966 31.537 1.00 1.70 \ ATOM 82 C LEU L 11 -21.588 -2.078 32.246 1.00 1.70 \ ATOM 83 O LEU L 11 -21.951 -1.018 31.715 1.00 1.70 \ ATOM 84 CB LEU L 11 -21.278 -4.129 30.834 1.00 1.70 \ ATOM 85 CG LEU L 11 -20.596 -4.779 29.627 1.00 1.70 \ ATOM 86 CD1 LEU L 11 -21.366 -6.017 29.172 1.00 1.70 \ ATOM 87 CD2 LEU L 11 -20.500 -3.788 28.485 1.00 1.70 \ ATOM 88 N VAL L 12 -22.074 -2.503 33.415 1.00 0.71 \ ATOM 89 CA VAL L 12 -23.123 -1.733 34.083 1.00 0.71 \ ATOM 90 C VAL L 12 -22.575 -0.411 34.589 1.00 0.71 \ ATOM 91 O VAL L 12 -23.262 0.611 34.560 1.00 0.71 \ ATOM 92 CB VAL L 12 -23.796 -2.506 35.249 1.00 0.71 \ ATOM 93 CG1 VAL L 12 -24.468 -3.760 34.726 1.00 0.71 \ ATOM 94 CG2 VAL L 12 -22.810 -2.846 36.320 1.00 0.71 \ ATOM 95 N GLU L 13 -21.321 -0.436 35.009 1.00 0.66 \ ATOM 96 CA GLU L 13 -20.606 0.767 35.392 1.00 0.66 \ ATOM 97 C GLU L 13 -20.600 1.714 34.232 1.00 0.66 \ ATOM 98 O GLU L 13 -20.925 2.878 34.390 1.00 0.66 \ ATOM 99 CB GLU L 13 -19.163 0.435 35.762 1.00 0.66 \ ATOM 100 CG GLU L 13 -18.343 1.614 36.223 1.00 0.66 \ ATOM 101 CD GLU L 13 -16.900 1.236 36.506 1.00 0.66 \ ATOM 102 OE1 GLU L 13 -16.583 0.028 36.476 1.00 0.66 \ ATOM 103 OE2 GLU L 13 -16.080 2.146 36.752 1.00 0.66 \ ATOM 104 N ALA L 14 -20.280 1.178 33.057 1.00 -0.02 \ ATOM 105 CA ALA L 14 -20.183 1.966 31.834 1.00 -0.02 \ ATOM 106 C ALA L 14 -21.523 2.521 31.451 1.00 -0.02 \ ATOM 107 O ALA L 14 -21.623 3.680 31.039 1.00 -0.02 \ ATOM 108 CB ALA L 14 -19.630 1.128 30.699 1.00 -0.02 \ ATOM 109 N LEU L 15 -22.548 1.682 31.568 1.00 1.70 \ ATOM 110 CA LEU L 15 -23.889 2.101 31.247 1.00 1.70 \ ATOM 111 C LEU L 15 -24.333 3.205 32.204 1.00 1.70 \ ATOM 112 O LEU L 15 -24.957 4.171 31.782 1.00 1.70 \ ATOM 113 CB LEU L 15 -24.852 0.906 31.294 1.00 1.70 \ ATOM 114 CG LEU L 15 -24.729 -0.096 30.141 1.00 1.70 \ ATOM 115 CD1 LEU L 15 -25.771 -1.178 30.246 1.00 1.70 \ ATOM 116 CD2 LEU L 15 -24.832 0.602 28.791 1.00 1.70 \ ATOM 117 N TYR L 16 -23.943 3.088 33.473 1.00 -0.22 \ ATOM 118 CA TYR L 16 -24.307 4.055 34.503 1.00 -0.22 \ ATOM 119 C TYR L 16 -23.852 5.468 34.136 1.00 -0.22 \ ATOM 120 O TYR L 16 -24.604 6.439 34.310 1.00 -0.22 \ ATOM 121 CB TYR L 16 -23.730 3.630 35.856 1.00 -0.22 \ ATOM 122 CG TYR L 16 -24.009 4.594 36.990 1.00 -0.22 \ ATOM 123 CD1 TYR L 16 -25.248 4.598 37.630 1.00 -0.22 \ ATOM 124 CD2 TYR L 16 -23.040 5.487 37.433 1.00 -0.22 \ ATOM 125 CE1 TYR L 16 -25.518 5.454 38.664 1.00 -0.22 \ ATOM 126 CE2 TYR L 16 -23.310 6.363 38.467 1.00 -0.22 \ ATOM 127 CZ TYR L 16 -24.552 6.338 39.080 1.00 -0.22 \ ATOM 128 OH TYR L 16 -24.823 7.201 40.121 1.00 -0.22 \ ATOM 129 N LEU L 17 -22.634 5.559 33.600 1.00 -0.23 \ ATOM 130 CA LEU L 17 -22.037 6.821 33.166 1.00 -0.23 \ ATOM 131 C LEU L 17 -22.655 7.361 31.881 1.00 -0.23 \ ATOM 132 O LEU L 17 -23.058 8.521 31.825 1.00 -0.23 \ ATOM 133 CB LEU L 17 -20.524 6.649 32.955 1.00 -0.23 \ ATOM 134 CG LEU L 17 -19.747 7.897 32.500 1.00 -0.23 \ ATOM 135 CD1 LEU L 17 -19.839 9.066 33.493 1.00 -0.23 \ ATOM 136 CD2 LEU L 17 -18.292 7.558 32.129 1.00 -0.23 \ ATOM 137 N VAL L 18 -22.725 6.512 30.859 1.00 0.26 \ ATOM 138 CA VAL L 18 -23.205 6.910 29.536 1.00 0.26 \ ATOM 139 C VAL L 18 -24.688 7.270 29.479 1.00 0.26 \ ATOM 140 O VAL L 18 -25.087 8.194 28.762 1.00 0.26 \ ATOM 141 CB VAL L 18 -22.937 5.801 28.496 1.00 0.26 \ ATOM 142 CG1 VAL L 18 -23.645 6.087 27.188 1.00 0.26 \ ATOM 143 CG2 VAL L 18 -21.461 5.665 28.269 1.00 0.26 \ ATOM 144 N CYS L 19 -25.520 6.554 30.216 1.00 1.70 \ ATOM 145 CA CYS L 19 -26.945 6.739 30.006 1.00 1.70 \ ATOM 146 C CYS L 19 -27.453 7.973 30.758 1.00 1.70 \ ATOM 147 O CYS L 19 -28.413 8.622 30.333 1.00 1.70 \ ATOM 148 CB CYS L 19 -27.700 5.467 30.419 1.00 1.70 \ ATOM 149 SG CYS L 19 -27.187 3.973 29.458 1.00 1.70 \ ATOM 150 N GLY L 20 -26.747 8.364 31.812 1.00 -0.17 \ ATOM 151 CA GLY L 20 -27.115 9.562 32.543 1.00 -0.17 \ ATOM 152 C GLY L 20 -28.516 9.413 33.096 1.00 -0.17 \ ATOM 153 O GLY L 20 -28.794 8.449 33.808 1.00 -0.17 \ ATOM 154 N GLU L 21 -29.395 10.355 32.764 1.00 0.19 \ ATOM 155 CA GLU L 21 -30.772 10.357 33.262 1.00 0.19 \ ATOM 156 C GLU L 21 -31.689 9.333 32.602 1.00 0.19 \ ATOM 157 O GLU L 21 -32.759 9.034 33.135 1.00 0.19 \ ATOM 158 CB GLU L 21 -31.393 11.746 33.126 1.00 0.19 \ ATOM 159 CG GLU L 21 -30.643 12.818 33.887 1.00 0.19 \ ATOM 160 CD GLU L 21 -31.240 14.196 33.694 1.00 0.19 \ ATOM 161 OE1 GLU L 21 -32.180 14.337 32.878 1.00 0.19 \ ATOM 162 OE2 GLU L 21 -30.776 15.134 34.374 1.00 0.19 \ ATOM 163 N ARG L 22 -31.297 8.821 31.439 1.00 -0.61 \ ATOM 164 CA ARG L 22 -32.096 7.789 30.779 1.00 -0.61 \ ATOM 165 C ARG L 22 -32.174 6.530 31.627 1.00 -0.61 \ ATOM 166 O ARG L 22 -33.217 5.894 31.730 1.00 -0.61 \ ATOM 167 CB ARG L 22 -31.512 7.417 29.413 1.00 -0.61 \ ATOM 168 CG ARG L 22 -31.473 8.519 28.375 1.00 -0.61 \ ATOM 169 CD ARG L 22 -30.663 8.054 27.160 1.00 -0.61 \ ATOM 170 NE ARG L 22 -31.395 7.102 26.321 1.00 -0.61 \ ATOM 171 CZ ARG L 22 -30.895 6.534 25.227 1.00 -0.61 \ ATOM 172 NH1 ARG L 22 -29.660 6.822 24.837 1.00 -0.61 \ ATOM 173 NH2 ARG L 22 -31.624 5.675 24.527 1.00 -0.61 \ ATOM 174 N GLY L 23 -31.061 6.193 32.260 1.00 1.70 \ ATOM 175 CA GLY L 23 -30.951 4.933 32.953 1.00 1.70 \ ATOM 176 C GLY L 23 -30.899 3.810 31.941 1.00 1.70 \ ATOM 177 O GLY L 23 -30.689 4.034 30.742 1.00 1.70 \ ATOM 178 N PHE L 24 -31.098 2.594 32.424 1.00 1.13 \ ATOM 179 CA PHE L 24 -30.944 1.424 31.586 1.00 1.13 \ ATOM 180 C PHE L 24 -31.560 0.213 32.251 1.00 1.13 \ ATOM 181 O PHE L 24 -31.638 0.127 33.478 1.00 1.13 \ ATOM 182 CB PHE L 24 -29.456 1.161 31.277 1.00 1.13 \ ATOM 183 CG PHE L 24 -28.604 0.897 32.502 1.00 1.13 \ ATOM 184 CD1 PHE L 24 -28.021 1.942 33.200 1.00 1.13 \ ATOM 185 CD2 PHE L 24 -28.368 -0.404 32.939 1.00 1.13 \ ATOM 186 CE1 PHE L 24 -27.234 1.702 34.327 1.00 1.13 \ ATOM 187 CE2 PHE L 24 -27.589 -0.655 34.065 1.00 1.13 \ ATOM 188 CZ PHE L 24 -27.023 0.397 34.762 1.00 1.13 \ ATOM 189 N PHE L 25 -32.006 -0.705 31.405 1.00 0.51 \ ATOM 190 CA PHE L 25 -32.427 -2.043 31.792 1.00 0.51 \ ATOM 191 C PHE L 25 -31.236 -2.996 31.652 1.00 0.51 \ ATOM 192 O PHE L 25 -30.688 -3.138 30.563 1.00 0.51 \ ATOM 193 CB PHE L 25 -33.574 -2.492 30.895 1.00 0.51 \ ATOM 194 CG PHE L 25 -34.617 -3.336 31.580 1.00 0.51 \ ATOM 195 CD1 PHE L 25 -34.469 -4.715 31.662 1.00 0.51 \ ATOM 196 CD2 PHE L 25 -35.777 -2.755 32.081 1.00 0.51 \ ATOM 197 CE1 PHE L 25 -35.442 -5.497 32.259 1.00 0.51 \ ATOM 198 CE2 PHE L 25 -36.752 -3.527 32.685 1.00 0.51 \ ATOM 199 CZ PHE L 25 -36.585 -4.903 32.778 1.00 0.51 \ ATOM 213 N THR L 27 -30.064 -6.883 31.826 1.00 -0.98 \ ATOM 214 CA THR L 27 -30.511 -8.277 31.845 1.00 -0.98 \ ATOM 215 C THR L 27 -29.462 -9.205 31.256 1.00 -0.98 \ ATOM 216 O THR L 27 -28.984 -8.979 30.141 1.00 -0.98 \ ATOM 217 CB THR L 27 -31.834 -8.468 31.080 1.00 -0.98 \ ATOM 218 OG1 THR L 27 -32.140 -9.864 31.012 1.00 -0.98 \ ATOM 219 CG2 THR L 27 -31.741 -7.903 29.666 1.00 -0.98 \ ATOM 220 N PRO L 28 -29.087 -10.250 32.012 1.00 -0.79 \ ATOM 221 CA PRO L 28 -28.096 -11.248 31.576 1.00 -0.79 \ ATOM 222 C PRO L 28 -28.468 -11.910 30.252 1.00 -0.79 \ ATOM 223 O PRO L 28 -27.568 -12.057 29.423 1.00 -0.79 \ ATOM 224 CB PRO L 28 -28.103 -12.276 32.712 1.00 -0.79 \ ATOM 225 CG PRO L 28 -28.622 -11.536 33.896 1.00 -0.79 \ ATOM 226 CD PRO L 28 -29.609 -10.542 33.356 1.00 -0.79 \ """, "e5emsH1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5emsH1_csv", state=0, origin=1) cmd.zoom("e5emsH1_csv", animate=-1)