cmd.read_pdbstr("""\ ATOM 1 N ASN D 3 -5.492 -12.486 35.841 1.00 -0.47 \ ATOM 2 CA ASN D 3 -6.822 -13.067 35.844 1.00 -0.47 \ ATOM 3 C ASN D 3 -7.309 -13.303 37.262 1.00 -0.47 \ ATOM 4 O ASN D 3 -8.409 -12.872 37.609 1.00 -0.47 \ ATOM 5 CB ASN D 3 -6.824 -14.392 35.071 1.00 -0.47 \ ATOM 6 CG ASN D 3 -8.224 -14.880 34.711 1.00 -0.47 \ ATOM 7 OD1 ASN D 3 -9.210 -14.152 34.853 1.00 -0.47 \ ATOM 8 ND2 ASN D 3 -8.310 -16.119 34.225 1.00 -0.47 \ ATOM 9 N GLN D 4 -6.482 -13.960 38.079 1.00 0.23 \ ATOM 10 CA GLN D 4 -6.792 -14.197 39.497 1.00 0.23 \ ATOM 11 C GLN D 4 -6.731 -12.942 40.374 1.00 0.23 \ ATOM 12 O GLN D 4 -7.474 -12.819 41.347 1.00 0.23 \ ATOM 13 CB GLN D 4 -5.895 -15.298 40.067 1.00 0.23 \ ATOM 14 CG GLN D 4 -6.160 -16.642 39.400 1.00 0.23 \ ATOM 15 CD GLN D 4 -5.473 -17.814 40.091 1.00 0.23 \ ATOM 16 OE1 GLN D 4 -5.000 -17.700 41.222 1.00 0.23 \ ATOM 17 NE2 GLN D 4 -5.399 -18.947 39.395 1.00 0.23 \ ATOM 18 N HIS D 5 -5.812 -12.039 40.070 1.00 -0.04 \ ATOM 19 CA HIS D 5 -5.722 -10.783 40.804 1.00 -0.04 \ ATOM 20 C HIS D 5 -6.939 -9.901 40.522 1.00 -0.04 \ ATOM 21 O HIS D 5 -7.450 -9.228 41.411 1.00 -0.04 \ ATOM 22 CB HIS D 5 -4.452 -10.019 40.444 1.00 -0.04 \ ATOM 23 CG HIS D 5 -4.281 -8.752 41.222 1.00 -0.04 \ ATOM 24 ND1 HIS D 5 -3.792 -8.732 42.511 1.00 -0.04 \ ATOM 25 CD2 HIS D 5 -4.606 -7.471 40.924 1.00 -0.04 \ ATOM 26 CE1 HIS D 5 -3.778 -7.488 42.956 1.00 -0.04 \ ATOM 27 NE2 HIS D 5 -4.274 -6.703 42.015 1.00 -0.04 \ ATOM 28 N LEU D 6 -7.354 -9.843 39.262 1.00 1.15 \ ATOM 29 CA LEU D 6 -8.523 -9.051 38.906 1.00 1.15 \ ATOM 30 C LEU D 6 -9.799 -9.620 39.493 1.00 1.15 \ ATOM 31 O LEU D 6 -10.632 -8.882 40.011 1.00 1.15 \ ATOM 32 CB LEU D 6 -8.671 -8.934 37.386 1.00 1.15 \ ATOM 33 CG LEU D 6 -7.545 -8.230 36.644 1.00 1.15 \ ATOM 34 CD1 LEU D 6 -7.849 -8.116 35.158 1.00 1.15 \ ATOM 35 CD2 LEU D 6 -7.314 -6.839 37.276 1.00 1.15 \ ATOM 36 N CYS D 7 -9.948 -10.933 39.402 1.00 1.70 \ ATOM 37 CA CYS D 7 -11.098 -11.617 39.977 1.00 1.70 \ ATOM 38 C CYS D 7 -11.190 -11.391 41.486 1.00 1.70 \ ATOM 39 O CYS D 7 -12.268 -11.163 42.023 1.00 1.70 \ ATOM 40 CB CYS D 7 -11.028 -13.117 39.675 1.00 1.70 \ ATOM 41 SG CYS D 7 -12.345 -14.078 40.481 1.00 1.70 \ ATOM 42 N GLY D 8 -10.043 -11.489 42.154 1.00 0.71 \ ATOM 43 CA GLY D 8 -9.940 -11.327 43.590 1.00 0.71 \ ATOM 44 C GLY D 8 -10.359 -9.949 44.029 1.00 0.71 \ ATOM 45 O GLY D 8 -10.846 -9.770 45.133 1.00 0.71 \ ATOM 46 N SER D 9 -10.096 -8.955 43.189 1.00 -0.48 \ ATOM 47 CA SER D 9 -10.510 -7.596 43.480 1.00 -0.48 \ ATOM 48 C SER D 9 -12.057 -7.494 43.562 1.00 -0.48 \ ATOM 49 O SER D 9 -12.607 -6.859 44.455 1.00 -0.48 \ ATOM 50 CB SER D 9 -9.958 -6.651 42.425 1.00 -0.48 \ ATOM 51 OG SER D 9 -10.478 -5.349 42.608 1.00 -0.48 \ ATOM 52 N HIS D 10 -12.744 -8.150 42.635 1.00 -0.23 \ ATOM 53 CA HIS D 10 -14.198 -8.194 42.637 1.00 -0.23 \ ATOM 54 C HIS D 10 -14.747 -9.057 43.794 1.00 -0.23 \ ATOM 55 O HIS D 10 -15.795 -8.752 44.350 1.00 -0.23 \ ATOM 56 CB HIS D 10 -14.697 -8.723 41.286 1.00 -0.23 \ ATOM 57 CG HIS D 10 -14.515 -7.764 40.152 1.00 -0.23 \ ATOM 58 ND1 HIS D 10 -15.490 -6.868 39.774 1.00 -0.23 \ ATOM 59 CD2 HIS D 10 -13.447 -7.512 39.357 1.00 -0.23 \ ATOM 60 CE1 HIS D 10 -15.054 -6.150 38.751 1.00 -0.23 \ ATOM 61 NE2 HIS D 10 -13.814 -6.517 38.486 1.00 -0.23 \ ATOM 62 N LEU D 11 -13.995 -10.079 44.191 1.00 1.70 \ ATOM 63 CA LEU D 11 -14.369 -10.944 45.317 1.00 1.70 \ ATOM 64 C LEU D 11 -14.441 -10.148 46.616 1.00 1.70 \ ATOM 65 O LEU D 11 -15.369 -10.302 47.406 1.00 1.70 \ ATOM 66 CB LEU D 11 -13.358 -12.082 45.487 1.00 1.70 \ ATOM 67 CG LEU D 11 -13.449 -13.281 44.548 1.00 1.70 \ ATOM 68 CD1 LEU D 11 -12.267 -14.236 44.776 1.00 1.70 \ ATOM 69 CD2 LEU D 11 -14.774 -14.010 44.727 1.00 1.70 \ ATOM 70 N VAL D 12 -13.433 -9.317 46.832 1.00 0.71 \ ATOM 71 CA VAL D 12 -13.309 -8.543 48.042 1.00 0.71 \ ATOM 72 C VAL D 12 -14.420 -7.491 48.125 1.00 0.71 \ ATOM 73 O VAL D 12 -14.927 -7.191 49.202 1.00 0.71 \ ATOM 74 CB VAL D 12 -11.907 -7.854 48.096 1.00 0.71 \ ATOM 75 CG1 VAL D 12 -11.873 -6.745 49.131 1.00 0.71 \ ATOM 76 CG2 VAL D 12 -10.802 -8.874 48.366 1.00 0.71 \ ATOM 77 N GLU D 13 -14.776 -6.934 46.970 1.00 0.66 \ ATOM 78 CA GLU D 13 -15.887 -6.009 46.842 1.00 0.66 \ ATOM 79 C GLU D 13 -17.169 -6.765 47.159 1.00 0.66 \ ATOM 80 O GLU D 13 -18.001 -6.300 47.918 1.00 0.66 \ ATOM 81 CB GLU D 13 -15.923 -5.387 45.426 1.00 0.66 \ ATOM 82 CG GLU D 13 -16.917 -4.255 45.263 1.00 0.66 \ ATOM 83 CD GLU D 13 -16.920 -3.659 43.865 1.00 0.66 \ ATOM 84 OE1 GLU D 13 -16.082 -4.062 43.029 1.00 0.66 \ ATOM 85 OE2 GLU D 13 -17.723 -2.732 43.622 1.00 0.66 \ ATOM 86 N ALA D 14 -17.292 -7.967 46.602 1.00 -0.02 \ ATOM 87 CA ALA D 14 -18.473 -8.783 46.832 1.00 -0.02 \ ATOM 88 C ALA D 14 -18.579 -9.201 48.306 1.00 -0.02 \ ATOM 89 O ALA D 14 -19.648 -9.135 48.888 1.00 -0.02 \ ATOM 90 CB ALA D 14 -18.445 -9.990 45.937 1.00 -0.02 \ ATOM 91 N LEU D 15 -17.473 -9.614 48.912 1.00 1.70 \ ATOM 92 CA LEU D 15 -17.492 -10.032 50.308 1.00 1.70 \ ATOM 93 C LEU D 15 -17.821 -8.876 51.246 1.00 1.70 \ ATOM 94 O LEU D 15 -18.476 -9.065 52.281 1.00 1.70 \ ATOM 95 CB LEU D 15 -16.151 -10.664 50.699 1.00 1.70 \ ATOM 96 CG LEU D 15 -15.824 -12.074 50.186 1.00 1.70 \ ATOM 97 CD1 LEU D 15 -14.496 -12.543 50.750 1.00 1.70 \ ATOM 98 CD2 LEU D 15 -16.937 -13.103 50.500 1.00 1.70 \ ATOM 99 N TYR D 16 -17.329 -7.686 50.895 1.00 -0.22 \ ATOM 100 CA TYR D 16 -17.595 -6.469 51.659 1.00 -0.22 \ ATOM 101 C TYR D 16 -19.093 -6.201 51.742 1.00 -0.22 \ ATOM 102 O TYR D 16 -19.607 -5.789 52.781 1.00 -0.22 \ ATOM 103 CB TYR D 16 -16.889 -5.270 51.038 1.00 -0.22 \ ATOM 104 CG TYR D 16 -17.186 -3.963 51.743 1.00 -0.22 \ ATOM 105 CD1 TYR D 16 -16.484 -3.594 52.882 1.00 -0.22 \ ATOM 106 CD2 TYR D 16 -18.203 -3.117 51.290 1.00 -0.22 \ ATOM 107 CE1 TYR D 16 -16.755 -2.398 53.540 1.00 -0.22 \ ATOM 108 CE2 TYR D 16 -18.485 -1.922 51.945 1.00 -0.22 \ ATOM 109 CZ TYR D 16 -17.758 -1.568 53.063 1.00 -0.22 \ ATOM 110 OH TYR D 16 -18.043 -0.384 53.700 1.00 -0.22 \ ATOM 111 N LEU D 17 -19.782 -6.419 50.631 1.00 -0.23 \ ATOM 112 CA LEU D 17 -21.231 -6.248 50.592 1.00 -0.23 \ ATOM 113 C LEU D 17 -22.004 -7.368 51.308 1.00 -0.23 \ ATOM 114 O LEU D 17 -22.808 -7.117 52.203 1.00 -0.23 \ ATOM 115 CB LEU D 17 -21.692 -6.156 49.134 1.00 -0.23 \ ATOM 116 CG LEU D 17 -23.195 -5.916 48.958 1.00 -0.23 \ ATOM 117 CD1 LEU D 17 -23.645 -4.661 49.661 1.00 -0.23 \ ATOM 118 CD2 LEU D 17 -23.552 -5.862 47.480 1.00 -0.23 \ ATOM 119 N VAL D 18 -21.698 -8.611 50.949 1.00 0.26 \ ATOM 120 CA VAL D 18 -22.415 -9.772 51.447 1.00 0.26 \ ATOM 121 C VAL D 18 -22.255 -10.002 52.952 1.00 0.26 \ ATOM 122 O VAL D 18 -23.203 -10.393 53.628 1.00 0.26 \ ATOM 123 CB VAL D 18 -21.966 -11.025 50.663 1.00 0.26 \ ATOM 124 CG1 VAL D 18 -22.485 -12.301 51.298 1.00 0.26 \ ATOM 125 CG2 VAL D 18 -22.421 -10.902 49.217 1.00 0.26 \ ATOM 126 N CYS D 19 -21.067 -9.749 53.488 1.00 1.70 \ ATOM 127 CA CYS D 19 -20.781 -10.121 54.874 1.00 1.70 \ ATOM 128 C CYS D 19 -21.321 -9.118 55.887 1.00 1.70 \ ATOM 129 O CYS D 19 -21.484 -9.445 57.058 1.00 1.70 \ ATOM 130 CB CYS D 19 -19.284 -10.319 55.055 1.00 1.70 \ ATOM 131 SG CYS D 19 -18.681 -11.655 53.987 1.00 1.70 \ ATOM 132 N GLY D 20 -21.584 -7.898 55.430 1.00 -0.17 \ ATOM 133 CA GLY D 20 -22.211 -6.881 56.250 1.00 -0.17 \ ATOM 134 C GLY D 20 -21.414 -6.543 57.487 1.00 -0.17 \ ATOM 135 O GLY D 20 -20.222 -6.259 57.400 1.00 -0.17 \ ATOM 136 N GLU D 21 -22.059 -6.633 58.646 1.00 0.19 \ ATOM 137 CA GLU D 21 -21.419 -6.254 59.893 1.00 0.19 \ ATOM 138 C GLU D 21 -20.382 -7.271 60.328 1.00 0.19 \ ATOM 139 O GLU D 21 -19.487 -6.941 61.094 1.00 0.19 \ ATOM 140 CB GLU D 21 -22.458 -6.104 61.008 1.00 0.19 \ ATOM 141 CG GLU D 21 -23.560 -5.109 60.729 1.00 0.19 \ ATOM 142 CD GLU D 21 -24.594 -5.055 61.850 1.00 0.19 \ ATOM 143 OE1 GLU D 21 -24.498 -5.872 62.797 1.00 0.19 \ ATOM 144 OE2 GLU D 21 -25.496 -4.186 61.788 1.00 0.19 \ ATOM 145 N ARG D 22 -20.505 -8.506 59.851 1.00 -0.61 \ ATOM 146 CA ARG D 22 -19.512 -9.530 60.167 1.00 -0.61 \ ATOM 147 C ARG D 22 -18.146 -9.232 59.546 1.00 -0.61 \ ATOM 148 O ARG D 22 -17.114 -9.413 60.178 1.00 -0.61 \ ATOM 149 CB ARG D 22 -19.973 -10.920 59.712 1.00 -0.61 \ ATOM 150 CG ARG D 22 -21.242 -11.460 60.363 1.00 -0.61 \ ATOM 151 CD ARG D 22 -21.638 -12.761 59.683 1.00 -0.61 \ ATOM 152 NE ARG D 22 -22.246 -12.536 58.375 1.00 -0.61 \ ATOM 153 CZ ARG D 22 -22.542 -13.504 57.510 1.00 -0.61 \ ATOM 154 NH1 ARG D 22 -22.279 -14.765 57.815 1.00 -0.61 \ ATOM 155 NH2 ARG D 22 -23.099 -13.214 56.339 1.00 -0.61 \ ATOM 156 N GLY D 23 -18.143 -8.749 58.315 1.00 1.70 \ ATOM 157 CA GLY D 23 -16.898 -8.587 57.599 1.00 1.70 \ ATOM 158 C GLY D 23 -16.291 -9.931 57.220 1.00 1.70 \ ATOM 159 O GLY D 23 -16.982 -10.949 57.199 1.00 1.70 \ ATOM 160 N PHE D 24 -14.992 -9.933 56.933 1.00 1.13 \ ATOM 161 CA PHE D 24 -14.329 -11.110 56.393 1.00 1.13 \ ATOM 162 C PHE D 24 -12.815 -11.069 56.601 1.00 1.13 \ ATOM 163 O PHE D 24 -12.248 -10.033 56.961 1.00 1.13 \ ATOM 164 CB PHE D 24 -14.638 -11.245 54.906 1.00 1.13 \ ATOM 165 CG PHE D 24 -14.169 -10.071 54.081 1.00 1.13 \ ATOM 166 CD1 PHE D 24 -12.887 -10.041 53.550 1.00 1.13 \ ATOM 167 CD2 PHE D 24 -15.013 -9.003 53.826 1.00 1.13 \ ATOM 168 CE1 PHE D 24 -12.452 -8.964 52.784 1.00 1.13 \ ATOM 169 CE2 PHE D 24 -14.585 -7.915 53.060 1.00 1.13 \ ATOM 170 CZ PHE D 24 -13.305 -7.901 52.543 1.00 1.13 \ ATOM 171 N PHE D 25 -12.169 -12.205 56.366 1.00 0.51 \ ATOM 172 CA PHE D 25 -10.717 -12.279 56.375 1.00 0.51 \ ATOM 173 C PHE D 25 -10.249 -12.655 54.977 1.00 0.51 \ ATOM 174 O PHE D 25 -10.695 -13.658 54.425 1.00 0.51 \ ATOM 175 CB PHE D 25 -10.228 -13.290 57.409 1.00 0.51 \ ATOM 176 CG PHE D 25 -8.787 -13.675 57.243 1.00 0.51 \ ATOM 177 CD1 PHE D 25 -7.778 -12.784 57.557 1.00 0.51 \ ATOM 178 CD2 PHE D 25 -8.439 -14.935 56.770 1.00 0.51 \ ATOM 179 CE1 PHE D 25 -6.447 -13.139 57.407 1.00 0.51 \ ATOM 180 CE2 PHE D 25 -7.108 -15.297 56.618 1.00 0.51 \ ATOM 181 CZ PHE D 25 -6.112 -14.399 56.936 1.00 0.51 \ ATOM 195 N THR D 27 -7.427 -13.911 52.553 1.00 -0.98 \ ATOM 196 CA THR D 27 -6.150 -14.581 52.330 1.00 -0.98 \ ATOM 197 C THR D 27 -6.081 -15.085 50.891 1.00 -0.98 \ ATOM 198 O THR D 27 -7.056 -15.622 50.371 1.00 -0.98 \ ATOM 199 CB THR D 27 -5.935 -15.752 53.298 1.00 -0.98 \ ATOM 200 OG1 THR D 27 -4.885 -16.584 52.796 1.00 -0.98 \ ATOM 201 CG2 THR D 27 -7.214 -16.585 53.446 1.00 -0.98 \ ATOM 202 N PRO D 28 -4.928 -14.905 50.237 1.00 -0.79 \ ATOM 203 CA PRO D 28 -4.809 -15.299 48.828 1.00 -0.79 \ ATOM 204 C PRO D 28 -4.706 -16.815 48.640 1.00 -0.79 \ ATOM 205 O PRO D 28 -4.630 -17.549 49.627 1.00 -0.79 \ ATOM 206 CB PRO D 28 -3.520 -14.604 48.386 1.00 -0.79 \ ATOM 207 CG PRO D 28 -2.700 -14.527 49.637 1.00 -0.79 \ ATOM 208 CD PRO D 28 -3.679 -14.327 50.765 1.00 -0.79 \ """, "e5emsJ1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5emsJ1_csv", state=0, origin=1) cmd.zoom("e5emsJ1_csv", animate=-1)