cmd.read_pdbstr("""\ ATOM 1 CA VAL D 486 -71.696 66.803 29.498 1.00 -0.66 \ ATOM 2 CA ARG D 487 -74.755 67.391 27.301 1.00 1.48 \ ATOM 3 CA LYS D 488 -74.318 71.142 27.809 1.00 -0.86 \ ATOM 4 CA CYS D 489 -70.659 71.022 26.731 1.00 -0.79 \ ATOM 5 CA HIS D 490 -69.330 71.267 23.160 1.00 -0.89 \ ATOM 6 CA THR D 491 -68.662 67.965 21.389 1.00 1.08 \ ATOM 7 CA CYS D 492 -65.407 67.792 19.440 1.00 1.79 \ ATOM 8 CA GLN D 493 -65.169 67.027 15.747 1.00 -0.67 \ ATOM 9 CA ASN D 494 -64.849 63.568 14.191 1.00 0.75 \ ATOM 10 CA GLY D 495 -66.934 61.806 16.848 1.00 -0.38 \ ATOM 11 CA GLY D 496 -65.085 63.172 19.900 1.00 1.09 \ ATOM 12 CA THR D 497 -66.907 62.844 23.229 1.00 -0.49 \ ATOM 13 CA VAL D 498 -66.789 65.639 25.770 1.00 1.56 \ ATOM 14 CA ILE D 499 -66.155 65.025 29.470 1.00 -0.90 \ ATOM 15 CA LEU D 500 -66.794 67.562 32.259 1.00 -0.63 \ ATOM 16 CA MET D 501 -64.153 67.952 34.925 1.00 -0.91 \ ATOM 17 CA ASP D 502 -65.083 70.461 37.536 1.00 -0.79 \ ATOM 18 CA GLY D 503 -66.142 73.305 35.279 1.00 -0.39 \ ATOM 19 CA LYS D 504 -63.748 72.646 32.404 1.00 -0.80 \ ATOM 20 CA CYS D 505 -64.704 70.370 29.552 1.00 0.75 \ ATOM 21 CA LEU D 506 -62.036 68.360 27.773 1.00 -0.87 \ ATOM 22 CA CYS D 507 -62.788 66.251 24.728 1.00 1.79 \ ATOM 23 CA ALA D 508 -61.884 62.591 24.725 1.00 -0.78 \ ATOM 24 CA CYS D 509 -60.970 61.589 21.186 1.00 1.79 \ ATOM 25 CA PRO D 510 -59.301 58.369 19.822 1.00 -0.61 \ ATOM 26 CA PHE D 511 -55.516 57.775 19.798 1.00 -0.94 \ ATOM 27 CA LYS D 512 -55.544 58.230 16.013 1.00 -0.15 \ ATOM 28 CA PHE D 513 -56.927 61.783 16.148 1.00 0.36 \ ATOM 29 CA GLU D 514 -56.743 63.952 19.276 1.00 -0.88 \ ATOM 30 CA GLY D 515 -57.435 67.546 20.283 1.00 1.47 \ ATOM 31 CA ILE D 516 -59.476 70.067 22.146 1.00 -0.92 \ ATOM 32 CA ALA D 517 -61.085 70.216 18.682 1.00 -0.41 \ ATOM 33 CA CYS D 518 -59.316 66.938 17.401 1.00 1.79 \ ATOM 34 CA GLU D 519 -57.280 68.128 14.350 1.00 -0.16 \ ATOM 35 CA ILE D 520 -54.008 66.554 15.574 1.00 -0.49 \ ATOM 36 CA SER D 521 -53.195 63.010 14.473 1.00 -1.00 \ ATOM 37 CA LYS D 522 -50.507 60.314 14.533 1.00 -1.00 \ """, "e5fmwD3_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5fmwD3_csv", state=0, origin=1) cmd.zoom("e5fmwD3_csv", animate=-1)