cmd.read_pdbstr("""\ ATOM 1 N VAL y 18 3.087 -51.876 -20.085 1.00 -1.50 \ ATOM 2 CA VAL y 18 4.485 -51.854 -19.519 1.00 -1.50 \ ATOM 3 C VAL y 18 5.545 -51.505 -20.605 1.00 -1.50 \ ATOM 4 O VAL y 18 5.817 -50.321 -20.876 1.00 -1.50 \ ATOM 5 CB VAL y 18 4.818 -53.191 -18.813 1.00 -1.50 \ ATOM 6 N ILE y 19 6.140 -52.531 -21.221 1.00 0.64 \ ATOM 7 CA ILE y 19 6.879 -52.364 -22.472 1.00 0.64 \ ATOM 8 C ILE y 19 5.869 -51.908 -23.521 1.00 0.64 \ ATOM 9 O ILE y 19 6.209 -51.142 -24.432 1.00 0.64 \ ATOM 10 CB ILE y 19 7.537 -53.681 -22.940 1.00 0.64 \ ATOM 11 N ALA y 20 4.620 -52.359 -23.343 1.00 0.64 \ ATOM 12 CA ALA y 20 3.478 -52.012 -24.188 1.00 0.64 \ ATOM 13 C ALA y 20 3.121 -50.512 -24.149 1.00 0.64 \ ATOM 14 O ALA y 20 2.891 -49.892 -25.201 1.00 0.64 \ ATOM 15 CB ALA y 20 2.263 -52.865 -23.810 1.00 0.64 \ ATOM 16 N GLN y 21 3.066 -49.929 -22.950 1.00 0.64 \ ATOM 17 CA GLN y 21 2.808 -48.496 -22.837 1.00 0.64 \ ATOM 18 C GLN y 21 3.938 -47.678 -23.471 1.00 0.64 \ ATOM 19 O GLN y 21 3.679 -46.737 -24.223 1.00 0.64 \ ATOM 20 CB GLN y 21 2.602 -48.090 -21.386 1.00 0.64 \ ATOM 21 CG GLN y 21 1.360 -48.661 -20.734 1.00 0.64 \ ATOM 22 CD GLN y 21 1.516 -48.763 -19.235 1.00 0.64 \ ATOM 23 OE1 GLN y 21 2.597 -49.088 -18.738 1.00 0.64 \ ATOM 24 NE2 GLN y 21 0.441 -48.488 -18.504 1.00 0.64 \ ATOM 25 N LEU y 22 5.186 -48.066 -23.194 1.00 0.64 \ ATOM 26 CA LEU y 22 6.375 -47.365 -23.720 1.00 0.64 \ ATOM 27 C LEU y 22 6.467 -47.382 -25.243 1.00 0.64 \ ATOM 28 O LEU y 22 6.950 -46.420 -25.845 1.00 0.64 \ ATOM 29 CB LEU y 22 7.668 -47.934 -23.116 1.00 0.64 \ ATOM 30 CG LEU y 22 8.043 -47.568 -21.677 1.00 0.64 \ ATOM 31 CD1 LEU y 22 9.521 -47.848 -21.451 1.00 0.64 \ ATOM 32 CD2 LEU y 22 7.727 -46.111 -21.364 1.00 0.64 \ ATOM 33 N THR y 23 6.012 -48.481 -25.845 1.00 0.64 \ ATOM 34 CA THR y 23 5.885 -48.607 -27.297 1.00 0.64 \ ATOM 35 C THR y 23 4.693 -47.804 -27.836 1.00 0.64 \ ATOM 36 O THR y 23 4.850 -47.073 -28.817 1.00 0.64 \ ATOM 37 CB THR y 23 5.754 -50.087 -27.711 1.00 0.64 \ ATOM 38 OG1 THR y 23 6.751 -50.854 -27.023 1.00 0.64 \ ATOM 39 CG2 THR y 23 5.935 -50.264 -29.229 1.00 0.64 \ ATOM 40 N MET y 24 3.508 -47.936 -27.225 1.00 0.64 \ ATOM 41 CA MET y 24 2.371 -47.103 -27.648 1.00 0.64 \ ATOM 42 C MET y 24 2.775 -45.622 -27.629 1.00 0.64 \ ATOM 43 O MET y 24 2.567 -44.908 -28.620 1.00 0.64 \ ATOM 44 CB MET y 24 1.116 -47.295 -26.783 1.00 0.64 \ ATOM 45 CG MET y 24 0.438 -48.671 -26.779 1.00 0.64 \ ATOM 46 SD MET y 24 0.347 -49.510 -28.373 1.00 0.64 \ ATOM 47 CE MET y 24 -1.362 -49.292 -28.821 1.00 0.64 \ ATOM 48 N ILE y 25 3.374 -45.179 -26.516 1.00 -1.50 \ ATOM 49 CA ILE y 25 3.734 -43.769 -26.317 1.00 -1.50 \ ATOM 50 C ILE y 25 4.747 -43.342 -27.360 1.00 -1.50 \ ATOM 51 O ILE y 25 4.617 -42.274 -27.944 1.00 -1.50 \ ATOM 52 CB ILE y 25 4.303 -43.468 -24.897 1.00 -1.50 \ ATOM 53 N ALA y 26 5.757 -44.184 -27.579 1.00 0.64 \ ATOM 54 CA ALA y 26 6.792 -43.921 -28.586 1.00 0.64 \ ATOM 55 C ALA y 26 6.224 -43.740 -30.009 1.00 0.64 \ ATOM 56 O ALA y 26 6.689 -42.877 -30.754 1.00 0.64 \ ATOM 57 CB ALA y 26 7.862 -45.003 -28.553 1.00 0.64 \ ATOM 58 N MET y 27 5.213 -44.529 -30.365 1.00 -1.50 \ ATOM 59 CA MET y 27 4.639 -44.471 -31.703 1.00 -1.50 \ ATOM 60 C MET y 27 3.756 -43.248 -31.906 1.00 -1.50 \ ATOM 61 O MET y 27 3.842 -42.573 -32.926 1.00 -1.50 \ ATOM 62 CB MET y 27 3.872 -45.750 -32.007 1.00 -1.50 \ ATOM 63 CG MET y 27 4.791 -46.943 -32.220 1.00 -1.50 \ ATOM 64 SD MET y 27 3.898 -48.432 -32.703 1.00 -1.50 \ ATOM 65 CE MET y 27 3.447 -49.126 -31.112 1.00 -1.50 \ ATOM 66 N ILE y 28 2.901 -42.973 -30.931 1.00 0.64 \ ATOM 67 CA ILE y 28 2.099 -41.767 -30.944 1.00 0.64 \ ATOM 68 C ILE y 28 3.045 -40.565 -30.858 1.00 0.64 \ ATOM 69 O ILE y 28 2.827 -39.549 -31.495 1.00 0.64 \ ATOM 70 CB ILE y 28 1.081 -41.799 -29.786 1.00 0.64 \ ATOM 71 CG1 ILE y 28 -0.015 -42.809 -30.093 1.00 0.64 \ ATOM 72 CG2 ILE y 28 0.472 -40.428 -29.523 1.00 0.64 \ ATOM 73 CD1 ILE y 28 -0.596 -43.471 -28.866 1.00 0.64 \ ATOM 74 N GLY y 29 4.126 -40.724 -30.105 1.00 -1.50 \ ATOM 75 CA GLY y 29 5.154 -39.690 -29.941 1.00 -1.50 \ ATOM 76 C GLY y 29 5.806 -39.240 -31.238 1.00 -1.50 \ ATOM 77 O GLY y 29 5.970 -38.039 -31.462 1.00 -1.50 \ ATOM 78 N ILE y 30 6.179 -40.190 -32.099 1.00 0.64 \ ATOM 79 CA ILE y 30 6.906 -39.843 -33.331 1.00 0.64 \ ATOM 80 C ILE y 30 5.961 -39.383 -34.433 1.00 0.64 \ ATOM 81 O ILE y 30 6.353 -38.570 -35.273 1.00 0.64 \ ATOM 82 CB ILE y 30 7.865 -40.954 -33.829 1.00 0.64 \ ATOM 83 CG1 ILE y 30 7.190 -42.332 -33.806 1.00 0.64 \ ATOM 84 CG2 ILE y 30 9.138 -40.972 -32.991 1.00 0.64 \ ATOM 85 CD1 ILE y 30 6.555 -42.747 -35.119 1.00 0.64 \ ATOM 86 N ALA y 31 4.715 -39.874 -34.404 1.00 0.64 \ ATOM 87 CA ALA y 31 3.727 -39.547 -35.439 1.00 0.64 \ ATOM 88 C ALA y 31 3.749 -38.059 -35.802 1.00 0.64 \ ATOM 89 O ALA y 31 3.848 -37.704 -36.986 1.00 0.64 \ ATOM 90 CB ALA y 31 2.319 -39.987 -35.022 1.00 0.64 \ ATOM 91 N GLY y 32 3.665 -37.198 -34.783 1.00 0.64 \ ATOM 92 CA GLY y 32 3.608 -35.738 -34.982 1.00 0.64 \ ATOM 93 C GLY y 32 4.786 -35.256 -35.802 1.00 0.64 \ ATOM 94 O GLY y 32 4.590 -34.673 -36.863 1.00 0.64 \ ATOM 95 N PRO y 33 6.024 -35.503 -35.313 1.00 0.64 \ ATOM 96 CA PRO y 33 7.233 -35.174 -36.061 1.00 0.64 \ ATOM 97 C PRO y 33 7.391 -35.925 -37.399 1.00 0.64 \ ATOM 98 O PRO y 33 7.983 -35.375 -38.327 1.00 0.64 \ ATOM 99 CB PRO y 33 8.355 -35.534 -35.082 1.00 0.64 \ ATOM 100 CG PRO y 33 7.727 -35.388 -33.746 1.00 0.64 \ ATOM 101 CD PRO y 33 6.345 -35.914 -33.934 1.00 0.64 \ ATOM 102 N MET y 34 6.882 -37.157 -37.488 1.00 -1.50 \ ATOM 103 CA MET y 34 6.751 -37.861 -38.770 1.00 -1.50 \ ATOM 104 C MET y 34 6.027 -37.044 -39.847 1.00 -1.50 \ ATOM 105 O MET y 34 6.549 -36.860 -40.955 1.00 -1.50 \ ATOM 106 CB MET y 34 6.059 -39.221 -38.608 1.00 -1.50 \ ATOM 107 CG MET y 34 6.401 -40.217 -39.711 1.00 -1.50 \ ATOM 108 SD MET y 34 8.165 -40.145 -40.132 1.00 -1.50 \ ATOM 109 CE MET y 34 8.973 -40.070 -38.523 1.00 -1.50 \ ATOM 110 N ILE y 35 4.830 -36.568 -39.521 1.00 -1.50 \ ATOM 111 CA ILE y 35 4.077 -35.739 -40.426 1.00 -1.50 \ ATOM 112 C ILE y 35 4.915 -34.536 -40.896 1.00 -1.50 \ ATOM 113 O ILE y 35 5.003 -34.281 -42.100 1.00 -1.50 \ ATOM 114 CB ILE y 35 2.733 -35.302 -39.809 1.00 -1.50 \ ATOM 115 CG1 ILE y 35 1.800 -36.504 -39.711 1.00 -1.50 \ ATOM 116 CG2 ILE y 35 2.075 -34.202 -40.630 1.00 -1.50 \ ATOM 117 CD1 ILE y 35 0.849 -36.450 -38.535 1.00 -1.50 \ ATOM 118 N ILE y 36 5.546 -33.829 -39.958 1.00 0.64 \ ATOM 119 CA ILE y 36 6.405 -32.683 -40.288 1.00 0.64 \ ATOM 120 C ILE y 36 7.587 -33.099 -41.198 1.00 0.64 \ ATOM 121 O ILE y 36 7.963 -32.364 -42.125 1.00 0.64 \ ATOM 122 CB ILE y 36 6.914 -31.987 -38.999 1.00 0.64 \ ATOM 123 CG1 ILE y 36 5.731 -31.560 -38.111 1.00 0.64 \ ATOM 124 CG2 ILE y 36 7.847 -30.811 -39.296 1.00 0.64 \ ATOM 125 CD1 ILE y 36 4.673 -30.696 -38.770 1.00 0.64 \ ATOM 126 N PHE y 37 8.151 -34.280 -40.947 1.00 0.64 \ ATOM 127 CA PHE y 37 9.306 -34.744 -41.708 1.00 0.64 \ ATOM 128 C PHE y 37 8.915 -35.069 -43.148 1.00 0.64 \ ATOM 129 O PHE y 37 9.591 -34.646 -44.084 1.00 0.64 \ ATOM 130 CB PHE y 37 9.952 -35.939 -41.023 1.00 0.64 \ ATOM 131 CG PHE y 37 11.172 -36.468 -41.721 1.00 0.64 \ ATOM 132 CD1 PHE y 37 11.173 -37.748 -42.265 1.00 0.64 \ ATOM 133 CD2 PHE y 37 12.325 -35.700 -41.825 1.00 0.64 \ ATOM 134 CE1 PHE y 37 12.299 -38.253 -42.897 1.00 0.64 \ ATOM 135 CE2 PHE y 37 13.452 -36.200 -42.466 1.00 0.64 \ ATOM 136 CZ PHE y 37 13.439 -37.479 -42.996 1.00 0.64 \ ATOM 137 N LEU y 38 7.807 -35.781 -43.322 1.00 0.64 \ ATOM 138 CA LEU y 38 7.378 -36.174 -44.651 1.00 0.64 \ ATOM 139 C LEU y 38 7.024 -34.963 -45.516 1.00 0.64 \ ATOM 140 O LEU y 38 7.175 -35.000 -46.734 1.00 0.64 \ ATOM 141 CB LEU y 38 6.207 -37.159 -44.591 1.00 0.64 \ ATOM 142 CG LEU y 38 6.425 -38.468 -43.820 1.00 0.64 \ ATOM 143 CD1 LEU y 38 5.082 -39.176 -43.671 1.00 0.64 \ ATOM 144 CD2 LEU y 38 7.497 -39.377 -44.437 1.00 0.64 \ ATOM 145 N LEU y 39 6.558 -33.889 -44.885 1.00 0.64 \ ATOM 146 CA LEU y 39 6.156 -32.705 -45.641 1.00 0.64 \ ATOM 147 C LEU y 39 7.347 -31.837 -45.992 1.00 0.64 \ ATOM 148 O LEU y 39 7.352 -31.207 -47.036 1.00 0.64 \ ATOM 149 CB LEU y 39 5.074 -31.908 -44.912 1.00 0.64 \ ATOM 150 CG LEU y 39 3.682 -32.555 -44.904 1.00 0.64 \ ATOM 151 CD1 LEU y 39 2.777 -31.804 -43.939 1.00 0.64 \ ATOM 152 CD2 LEU y 39 3.067 -32.587 -46.297 1.00 0.64 \ ATOM 153 N ALA y 40 8.349 -31.812 -45.114 1.00 0.64 \ ATOM 154 CA ALA y 40 9.581 -31.078 -45.347 1.00 0.64 \ ATOM 155 C ALA y 40 10.348 -31.749 -46.478 1.00 0.64 \ ATOM 156 O ALA y 40 10.825 -31.085 -47.405 1.00 0.64 \ ATOM 157 CB ALA y 40 10.430 -31.049 -44.088 1.00 0.64 \ ATOM 158 N VAL y 41 10.450 -33.071 -46.390 1.00 -1.50 \ ATOM 159 CA VAL y 41 11.120 -33.879 -47.398 1.00 -1.50 \ ATOM 160 C VAL y 41 10.472 -33.748 -48.780 1.00 -1.50 \ ATOM 161 O VAL y 41 11.156 -33.829 -49.796 1.00 -1.50 \ ATOM 162 CB VAL y 41 11.202 -35.352 -46.951 1.00 -1.50 \ ATOM 163 CG1 VAL y 41 11.285 -36.297 -48.145 1.00 -1.50 \ ATOM 164 CG2 VAL y 41 12.384 -35.540 -46.005 1.00 -1.50 \ ATOM 165 N ARG y 42 9.167 -33.517 -48.827 1.00 0.64 \ ATOM 166 CA ARG y 42 8.515 -33.364 -50.124 1.00 0.64 \ ATOM 167 C ARG y 42 7.923 -31.974 -50.409 1.00 0.64 \ ATOM 168 O ARG y 42 6.928 -31.827 -51.134 1.00 0.64 \ ATOM 169 CB ARG y 42 7.524 -34.493 -50.356 1.00 0.64 \ ATOM 170 CG ARG y 42 6.243 -34.350 -49.596 1.00 0.64 \ ATOM 171 CD ARG y 42 5.286 -35.356 -50.171 1.00 0.64 \ ATOM 172 NE ARG y 42 5.526 -36.698 -49.667 1.00 0.64 \ ATOM 173 CZ ARG y 42 4.580 -37.630 -49.612 1.00 0.64 \ ATOM 174 NH1 ARG y 42 3.337 -37.344 -50.042 1.00 0.64 \ ATOM 175 NH2 ARG y 42 4.874 -38.838 -49.124 1.00 0.64 \ ATOM 176 N ARG y 43 8.590 -30.964 -49.854 1.00 -1.50 \ ATOM 177 CA ARG y 43 8.291 -29.542 -50.075 1.00 -1.50 \ ATOM 178 C ARG y 43 6.788 -29.199 -50.061 1.00 -1.50 \ ATOM 179 O ARG y 43 6.281 -28.461 -50.922 1.00 -1.50 \ ATOM 180 CB ARG y 43 9.006 -29.034 -51.333 1.00 -1.50 \ ATOM 181 CG ARG y 43 10.518 -29.211 -51.288 1.00 -1.50 \ ATOM 182 CD ARG y 43 11.254 -28.175 -52.133 1.00 -1.50 \ ATOM 183 NE ARG y 43 12.711 -28.343 -52.046 1.00 -1.50 \ ATOM 184 CZ ARG y 43 13.509 -28.742 -53.042 1.00 -1.50 \ ATOM 185 NH1 ARG y 43 13.016 -29.003 -54.252 1.00 -1.50 \ ATOM 186 NH2 ARG y 43 14.818 -28.863 -52.829 1.00 -1.50 \ ATOM 187 N GLY y 44 6.086 -29.730 -49.056 1.00 0.64 \ ATOM 188 CA GLY y 44 4.644 -29.512 -48.899 1.00 0.64 \ ATOM 189 C GLY y 44 4.242 -28.161 -48.317 1.00 0.64 \ ATOM 190 O GLY y 44 5.085 -27.291 -48.021 1.00 0.64 \ ATOM 191 N ASN y 45 2.935 -28.000 -48.142 1.00 -1.50 \ ATOM 192 CA ASN y 45 2.342 -26.737 -47.754 1.00 -1.50 \ ATOM 193 C ASN y 45 2.452 -26.425 -46.232 1.00 -1.50 \ ATOM 194 O ASN y 45 1.445 -26.149 -45.555 1.00 -1.50 \ ATOM 195 CB ASN y 45 0.898 -26.700 -48.260 1.00 -1.50 \ ATOM 196 CG ASN y 45 0.393 -25.288 -48.481 1.00 -1.50 \ ATOM 197 OD1 ASN y 45 1.173 -24.327 -48.508 1.00 -1.50 \ ATOM 198 ND2 ASN y 45 -0.923 -25.151 -48.638 1.00 -1.50 \ ATOM 199 N LEU y 46 3.693 -26.453 -45.729 1.00 0.64 \ ATOM 200 CA LEU y 46 4.035 -26.138 -44.337 1.00 0.64 \ ATOM 201 C LEU y 46 3.753 -24.674 -43.953 1.00 0.64 \ ATOM 202 O LEU y 46 3.635 -24.303 -42.773 1.00 0.64 \ ATOM 203 CB LEU y 46 5.506 -26.496 -44.044 1.00 0.64 \ ATOM 204 CG LEU y 46 5.932 -27.964 -43.880 1.00 0.64 \ ATOM 205 CD1 LEU y 46 7.404 -28.063 -43.486 1.00 0.64 \ ATOM 206 CD2 LEU y 46 5.071 -28.724 -42.875 1.00 0.64 \ ATOM 207 OXT LEU y 46 3.619 -23.812 -44.822 1.00 0.64 \ """, "e5h2fy1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5h2fy1_csv", state=0, origin=1) cmd.zoom("e5h2fy1_csv", animate=-1)