cmd.read_pdbstr("""\ ATOM 1 N ALA Y 20 88.046 134.886 73.901 1.00 0.64 \ ATOM 2 CA ALA Y 20 87.053 134.260 73.036 1.00 0.64 \ ATOM 3 C ALA Y 20 86.825 135.089 71.776 1.00 0.64 \ ATOM 4 O ALA Y 20 86.376 134.568 70.754 1.00 0.64 \ ATOM 5 CB ALA Y 20 85.744 134.063 73.786 1.00 0.64 \ ATOM 6 N GLN Y 21 87.140 136.386 71.856 1.00 0.64 \ ATOM 7 CA GLN Y 21 86.949 137.275 70.715 1.00 0.64 \ ATOM 8 C GLN Y 21 87.819 136.890 69.527 1.00 0.64 \ ATOM 9 O GLN Y 21 87.517 137.287 68.397 1.00 0.64 \ ATOM 10 CB GLN Y 21 87.227 138.722 71.121 1.00 0.64 \ ATOM 11 CG GLN Y 21 86.193 139.303 72.070 1.00 0.64 \ ATOM 12 CD GLN Y 21 86.461 140.757 72.403 1.00 0.64 \ ATOM 13 OE1 GLN Y 21 87.469 141.327 71.985 1.00 0.64 \ ATOM 14 NE2 GLN Y 21 85.555 141.368 73.159 1.00 0.64 \ ATOM 15 N LEU Y 22 88.893 136.135 69.753 1.00 0.64 \ ATOM 16 CA LEU Y 22 89.672 135.585 68.655 1.00 0.64 \ ATOM 17 C LEU Y 22 89.185 134.208 68.224 1.00 0.64 \ ATOM 18 O LEU Y 22 89.535 133.757 67.128 1.00 0.64 \ ATOM 19 CB LEU Y 22 91.154 135.503 69.039 1.00 0.64 \ ATOM 20 CG LEU Y 22 91.759 136.696 69.783 1.00 0.64 \ ATOM 21 CD1 LEU Y 22 93.106 136.317 70.364 1.00 0.64 \ ATOM 22 CD2 LEU Y 22 91.899 137.902 68.874 1.00 0.64 \ ATOM 23 N THR Y 23 88.384 133.537 69.056 1.00 0.64 \ ATOM 24 CA THR Y 23 87.864 132.222 68.694 1.00 0.64 \ ATOM 25 C THR Y 23 86.747 132.327 67.662 1.00 0.64 \ ATOM 26 O THR Y 23 86.682 131.514 66.733 1.00 0.64 \ ATOM 27 CB THR Y 23 87.361 131.490 69.939 1.00 0.64 \ ATOM 28 OG1 THR Y 23 88.354 131.555 70.970 1.00 0.64 \ ATOM 29 CG2 THR Y 23 87.068 130.030 69.617 1.00 0.64 \ ATOM 30 N MET Y 24 85.863 133.317 67.810 1.00 0.64 \ ATOM 31 CA MET Y 24 84.744 133.462 66.883 1.00 0.64 \ ATOM 32 C MET Y 24 85.233 133.754 65.471 1.00 0.64 \ ATOM 33 O MET Y 24 84.864 133.059 64.516 1.00 0.64 \ ATOM 34 CB MET Y 24 83.803 134.568 67.364 1.00 0.64 \ ATOM 35 CG MET Y 24 83.034 134.230 68.628 1.00 0.64 \ ATOM 36 SD MET Y 24 82.027 132.746 68.444 1.00 0.64 \ ATOM 37 CE MET Y 24 81.110 132.765 69.982 1.00 0.64 \ ATOM 38 N ILE Y 25 86.069 134.784 65.319 1.00 -1.50 \ ATOM 39 CA ILE Y 25 86.561 135.157 63.996 1.00 -1.50 \ ATOM 40 C ILE Y 25 87.424 134.049 63.407 1.00 -1.50 \ ATOM 41 O ILE Y 25 87.543 133.928 62.181 1.00 -1.50 \ ATOM 42 CB ILE Y 25 87.316 136.501 64.073 1.00 -1.50 \ ATOM 43 CG1 ILE Y 25 87.755 136.958 62.680 1.00 -1.50 \ ATOM 44 CG2 ILE Y 25 88.503 136.398 65.022 1.00 -1.50 \ ATOM 45 CD1 ILE Y 25 88.031 138.436 62.583 1.00 -1.50 \ ATOM 46 N ALA Y 26 88.027 133.215 64.258 1.00 0.64 \ ATOM 47 CA ALA Y 26 88.756 132.055 63.756 1.00 0.64 \ ATOM 48 C ALA Y 26 87.813 131.072 63.073 1.00 0.64 \ ATOM 49 O ALA Y 26 88.185 130.429 62.084 1.00 0.64 \ ATOM 50 CB ALA Y 26 89.513 131.373 64.895 1.00 0.64 \ ATOM 51 N MET Y 27 86.586 130.944 63.584 1.00 -1.50 \ ATOM 52 CA MET Y 27 85.597 130.077 62.952 1.00 -1.50 \ ATOM 53 C MET Y 27 84.885 130.771 61.799 1.00 -1.50 \ ATOM 54 O MET Y 27 84.478 130.108 60.838 1.00 -1.50 \ ATOM 55 CB MET Y 27 84.571 129.603 63.983 1.00 -1.50 \ ATOM 56 CG MET Y 27 85.173 129.095 65.281 1.00 -1.50 \ ATOM 57 SD MET Y 27 83.910 128.559 66.451 1.00 -1.50 \ ATOM 58 CE MET Y 27 82.732 129.902 66.312 1.00 -1.50 \ ATOM 59 N ILE Y 28 84.714 132.091 61.879 1.00 0.64 \ ATOM 60 CA ILE Y 28 84.105 132.831 60.779 1.00 0.64 \ ATOM 61 C ILE Y 28 85.123 133.074 59.672 1.00 0.64 \ ATOM 62 O ILE Y 28 84.785 133.043 58.482 1.00 0.64 \ ATOM 63 CB ILE Y 28 83.494 134.146 61.301 1.00 0.64 \ ATOM 64 CG1 ILE Y 28 82.306 133.852 62.221 1.00 0.64 \ ATOM 65 CG2 ILE Y 28 83.064 135.045 60.153 1.00 0.64 \ ATOM 66 CD1 ILE Y 28 81.620 135.093 62.753 1.00 0.64 \ ATOM 67 N GLY Y 29 86.387 133.296 60.039 1.00 -1.50 \ ATOM 68 CA GLY Y 29 87.422 133.533 59.049 1.00 -1.50 \ ATOM 69 C GLY Y 29 87.787 132.316 58.227 1.00 -1.50 \ ATOM 70 O GLY Y 29 88.368 132.464 57.148 1.00 -1.50 \ ATOM 71 N ILE Y 30 87.466 131.117 58.711 1.00 0.64 \ ATOM 72 CA ILE Y 30 87.751 129.911 57.944 1.00 0.64 \ ATOM 73 C ILE Y 30 86.565 129.504 57.071 1.00 0.64 \ ATOM 74 O ILE Y 30 86.764 128.969 55.977 1.00 0.64 \ ATOM 75 CB ILE Y 30 88.172 128.760 58.879 1.00 0.64 \ ATOM 76 CG1 ILE Y 30 88.543 127.513 58.072 1.00 0.64 \ ATOM 77 CG2 ILE Y 30 87.067 128.429 59.869 1.00 0.64 \ ATOM 78 CD1 ILE Y 30 89.639 127.743 57.055 1.00 0.64 \ ATOM 79 N ALA Y 31 85.335 129.778 57.519 1.00 0.64 \ ATOM 80 CA ALA Y 31 84.151 129.325 56.794 1.00 0.64 \ ATOM 81 C ALA Y 31 84.107 129.871 55.373 1.00 0.64 \ ATOM 82 O ALA Y 31 83.569 129.214 54.474 1.00 0.64 \ ATOM 83 CB ALA Y 31 82.887 129.724 57.555 1.00 0.64 \ ATOM 84 N GLY Y 32 84.662 131.059 55.149 1.00 0.64 \ ATOM 85 CA GLY Y 32 84.711 131.643 53.830 1.00 0.64 \ ATOM 86 C GLY Y 32 85.556 130.833 52.867 1.00 0.64 \ ATOM 87 O GLY Y 32 85.050 130.242 51.908 1.00 0.64 \ ATOM 88 N PRO Y 33 86.871 130.799 53.099 1.00 0.64 \ ATOM 89 CA PRO Y 33 87.743 129.983 52.240 1.00 0.64 \ ATOM 90 C PRO Y 33 87.446 128.495 52.307 1.00 0.64 \ ATOM 91 O PRO Y 33 87.813 127.766 51.376 1.00 0.64 \ ATOM 92 CB PRO Y 33 89.151 130.297 52.766 1.00 0.64 \ ATOM 93 CG PRO Y 33 89.016 131.618 53.451 1.00 0.64 \ ATOM 94 CD PRO Y 33 87.642 131.617 54.050 1.00 0.64 \ ATOM 95 N MET Y 34 86.799 128.017 53.375 1.00 -1.50 \ ATOM 96 CA MET Y 34 86.452 126.601 53.451 1.00 -1.50 \ ATOM 97 C MET Y 34 85.452 126.222 52.369 1.00 -1.50 \ ATOM 98 O MET Y 34 85.579 125.165 51.740 1.00 -1.50 \ ATOM 99 CB MET Y 34 85.894 126.261 54.833 1.00 -1.50 \ ATOM 100 CG MET Y 34 85.400 124.831 54.957 1.00 -1.50 \ ATOM 101 SD MET Y 34 84.896 124.382 56.627 1.00 -1.50 \ ATOM 102 CE MET Y 34 84.424 122.672 56.381 1.00 -1.50 \ ATOM 103 N ILE Y 35 84.446 127.071 52.141 1.00 -1.50 \ ATOM 104 CA ILE Y 35 83.482 126.820 51.071 1.00 -1.50 \ ATOM 105 C ILE Y 35 84.203 126.649 49.741 1.00 -1.50 \ ATOM 106 O ILE Y 35 83.969 125.682 49.007 1.00 -1.50 \ ATOM 107 CB ILE Y 35 82.442 127.953 51.006 1.00 -1.50 \ ATOM 108 CG1 ILE Y 35 81.596 127.981 52.280 1.00 -1.50 \ ATOM 109 CG2 ILE Y 35 81.555 127.792 49.780 1.00 -1.50 \ ATOM 110 CD1 ILE Y 35 80.612 129.128 52.330 1.00 -1.50 \ ATOM 111 N ILE Y 36 85.110 127.577 49.422 1.00 0.64 \ ATOM 112 CA ILE Y 36 85.892 127.481 48.191 1.00 0.64 \ ATOM 113 C ILE Y 36 86.648 126.161 48.128 1.00 0.64 \ ATOM 114 O ILE Y 36 86.866 125.610 47.042 1.00 0.64 \ ATOM 115 CB ILE Y 36 86.849 128.686 48.082 1.00 0.64 \ ATOM 116 CG1 ILE Y 36 86.078 130.000 48.236 1.00 0.64 \ ATOM 117 CG2 ILE Y 36 87.598 128.666 46.758 1.00 0.64 \ ATOM 118 CD1 ILE Y 36 85.070 130.251 47.137 1.00 0.64 \ ATOM 119 N PHE Y 37 87.040 125.620 49.284 1.00 0.64 \ ATOM 120 CA PHE Y 37 87.825 124.391 49.306 1.00 0.64 \ ATOM 121 C PHE Y 37 86.974 123.162 48.998 1.00 0.64 \ ATOM 122 O PHE Y 37 87.421 122.266 48.273 1.00 0.64 \ ATOM 123 CB PHE Y 37 88.512 124.236 50.663 1.00 0.64 \ ATOM 124 CG PHE Y 37 89.381 123.015 50.766 1.00 0.64 \ ATOM 125 CD1 PHE Y 37 90.663 123.016 50.242 1.00 0.64 \ ATOM 126 CD2 PHE Y 37 88.917 121.868 51.388 1.00 0.64 \ ATOM 127 CE1 PHE Y 37 91.464 121.895 50.333 1.00 0.64 \ ATOM 128 CE2 PHE Y 37 89.714 120.744 51.483 1.00 0.64 \ ATOM 129 CZ PHE Y 37 90.990 120.758 50.955 1.00 0.64 \ ATOM 130 N LEU Y 38 85.755 123.098 49.541 1.00 0.64 \ ATOM 131 CA LEU Y 38 84.912 121.922 49.335 1.00 0.64 \ ATOM 132 C LEU Y 38 84.564 121.739 47.863 1.00 0.64 \ ATOM 133 O LEU Y 38 84.668 120.633 47.320 1.00 0.64 \ ATOM 134 CB LEU Y 38 83.638 122.027 50.176 1.00 0.64 \ ATOM 135 CG LEU Y 38 83.670 121.441 51.590 1.00 0.64 \ ATOM 136 CD1 LEU Y 38 84.405 122.357 52.551 1.00 0.64 \ ATOM 137 CD2 LEU Y 38 82.259 121.154 52.087 1.00 0.64 \ ATOM 138 N LEU Y 39 84.144 122.818 47.197 1.00 0.64 \ ATOM 139 CA LEU Y 39 83.769 122.722 45.792 1.00 0.64 \ ATOM 140 C LEU Y 39 84.972 122.519 44.881 1.00 0.64 \ ATOM 141 O LEU Y 39 84.800 122.079 43.739 1.00 0.64 \ ATOM 142 CB LEU Y 39 82.997 123.971 45.357 1.00 0.64 \ ATOM 143 CG LEU Y 39 81.581 124.185 45.905 1.00 0.64 \ ATOM 144 CD1 LEU Y 39 81.604 124.782 47.294 1.00 0.64 \ ATOM 145 CD2 LEU Y 39 80.776 125.070 44.972 1.00 0.64 \ ATOM 146 N ALA Y 40 86.182 122.825 45.356 1.00 0.64 \ ATOM 147 CA ALA Y 40 87.365 122.654 44.520 1.00 0.64 \ ATOM 148 C ALA Y 40 87.718 121.182 44.350 1.00 0.64 \ ATOM 149 O ALA Y 40 88.184 120.769 43.282 1.00 0.64 \ ATOM 150 CB ALA Y 40 88.544 123.424 45.115 1.00 0.64 \ ATOM 151 N VAL Y 41 87.505 120.375 45.390 1.00 -1.50 \ ATOM 152 CA VAL Y 41 87.839 118.957 45.319 1.00 -1.50 \ ATOM 153 C VAL Y 41 86.673 118.098 44.842 1.00 -1.50 \ ATOM 154 O VAL Y 41 86.888 116.943 44.448 1.00 -1.50 \ ATOM 155 CB VAL Y 41 88.338 118.445 46.682 1.00 -1.50 \ ATOM 156 CG1 VAL Y 41 89.458 119.335 47.203 1.00 -1.50 \ ATOM 157 CG2 VAL Y 41 87.192 118.375 47.680 1.00 -1.50 \ ATOM 158 N ARG Y 42 85.448 118.623 44.865 1.00 0.64 \ ATOM 159 CA ARG Y 42 84.278 117.917 44.361 1.00 0.64 \ ATOM 160 C ARG Y 42 83.805 118.495 43.030 1.00 0.64 \ ATOM 161 O ARG Y 42 82.604 118.508 42.749 1.00 0.64 \ ATOM 162 CB ARG Y 42 83.149 117.941 45.390 1.00 0.64 \ ATOM 163 CG ARG Y 42 83.150 116.740 46.319 1.00 0.64 \ ATOM 164 CD ARG Y 42 82.668 115.492 45.594 1.00 0.64 \ ATOM 165 NE ARG Y 42 81.211 115.411 45.552 1.00 0.64 \ ATOM 166 CZ ARG Y 42 80.526 114.669 44.687 1.00 0.64 \ ATOM 167 NH1 ARG Y 42 81.166 113.951 43.774 1.00 0.64 \ ATOM 168 NH2 ARG Y 42 79.201 114.655 44.727 1.00 0.64 \ ATOM 169 N ARG Y 43 84.749 118.964 42.212 1.00 -1.50 \ ATOM 170 CA ARG Y 43 84.513 119.566 40.900 1.00 -1.50 \ ATOM 171 C ARG Y 43 83.261 120.439 40.856 1.00 -1.50 \ ATOM 172 O ARG Y 43 82.472 120.363 39.910 1.00 -1.50 \ ATOM 173 CB ARG Y 43 84.454 118.478 39.815 1.00 -1.50 \ ATOM 174 CG ARG Y 43 83.308 117.469 39.904 1.00 -1.50 \ ATOM 175 CD ARG Y 43 83.197 116.668 38.616 1.00 -1.50 \ ATOM 176 NE ARG Y 43 83.709 117.422 37.473 1.00 -1.50 \ ATOM 177 CZ ARG Y 43 83.500 117.094 36.202 1.00 -1.50 \ ATOM 178 NH1 ARG Y 43 84.009 117.840 35.231 1.00 -1.50 \ ATOM 179 NH2 ARG Y 43 82.774 116.025 35.901 1.00 -1.50 \ ATOM 180 N GLY Y 44 83.084 121.287 41.865 1.00 0.64 \ ATOM 181 CA GLY Y 44 81.941 122.179 41.899 1.00 0.64 \ ATOM 182 C GLY Y 44 81.961 123.185 40.762 1.00 0.64 \ ATOM 183 O GLY Y 44 82.906 123.290 39.980 1.00 0.64 \ ATOM 184 N ASN Y 45 80.872 123.949 40.675 1.00 -1.50 \ ATOM 185 CA ASN Y 45 80.705 124.941 39.614 1.00 -1.50 \ ATOM 186 C ASN Y 45 81.237 126.282 40.113 1.00 -1.50 \ ATOM 187 O ASN Y 45 80.492 127.197 40.470 1.00 -1.50 \ ATOM 188 CB ASN Y 45 79.245 125.024 39.186 1.00 -1.50 \ ATOM 189 CG ASN Y 45 79.024 126.008 38.060 1.00 -1.50 \ ATOM 190 OD1 ASN Y 45 78.151 126.872 38.138 1.00 -1.50 \ ATOM 191 ND2 ASN Y 45 79.824 125.891 37.006 1.00 -1.50 \ ATOM 192 N LEU Y 46 82.563 126.388 40.139 1.00 0.64 \ ATOM 193 CA LEU Y 46 83.234 127.612 40.567 1.00 0.64 \ ATOM 194 C LEU Y 46 83.491 128.541 39.385 1.00 0.64 \ ATOM 195 O LEU Y 46 83.969 129.663 39.555 1.00 0.64 \ ATOM 196 CB LEU Y 46 84.553 127.287 41.272 1.00 0.64 \ ATOM 197 CG LEU Y 46 84.464 126.564 42.617 1.00 0.64 \ ATOM 198 CD1 LEU Y 46 85.854 126.307 43.181 1.00 0.64 \ ATOM 199 CD2 LEU Y 46 83.626 127.363 43.601 1.00 0.64 \ ATOM 200 OXT LEU Y 46 83.233 128.193 38.232 1.00 0.64 \ """, "e5kaiY1_csv") cmd.show_as('cartoon', "all") cmd.spectrum('b', selection="all") cmd.center("e5kaiY1_csv", state=0, origin=1) cmd.zoom("e5kaiY1_csv", animate=-1)